#id chr start end size cnv CNstate score probeNum meanMarkerDistance algorithm ovpPer_ipn ovp_ipn ovpPer_nexus ovpCNV_nexus ovpPer_partek ovpCNV_partek three_alg_overlap affy6_pNum ovpPer_affy6 ovpCNV_affy6 ovpAlg_affy6 Algorithms cytoband gap(in bp) genes #_genes exons #_exons OMIM decipher dgv_inv dgv_cnv dgv_indel seg_dup(%) #_Affy6_probes asd-id_candidates #_asd-id_candidate_genes dgv_beta Affy_filter tcag_filter ipn_tag any_algo affy6_tag sample_ID gender combined WWCZ24238 2 107031935 111365996 4334062 Gain 3 0.904286 2806 1545 chas 84.69 Gain 93.81 Gain 99.62 Gain GainGainGain 2203 NA NA NA "ChAS,IPN,NXS,PTK" "2q12.2,2q12.3,2q13" 142001(1|contig) "ST6GAL2,ANKRD57,LIMS3,NPHP1,LIMS1,LOC729121,SLC5A7,MIR4267,MIR4266,MIR4265,LOC100287216,LIMS3-LOC440895,LINC00116,MALL,GCC2,LOC440895,SEPT10,SULT1C2P1,RANBP2,SULT1C3,SULT1C2,SH3RF3,SULT1C4,LOC100288570,LOC151009,RGPD3,LOC100507334,RGPD6,RGPD4,RGPD5,LIMS3L,CCDC138,EDAR" 33 "ST6GAL2,ANKRD57,LIMS3,NPHP1,LIMS1,LOC729121,SLC5A7,MIR4267,MIR4266,MIR4265,LOC100287216,LIMS3-LOC440895,LINC00116,MALL,GCC2,LOC440895,SEPT10,SULT1C2P1,RANBP2,SULT1C3,SULT1C2,SH3RF3,SULT1C4,LOC100288570,LOC151009,RGPD3,LOC100507334,RGPD6,RGPD4,RGPD5,LIMS3L,CCDC138,EDAR" 33 "NPHP1,EDAR,RANBP2" - 142915(1|Kidd(2008)) "1625290(123|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Wang(2008),Kidd(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Park(2010))" "10001(32|Conrad(2009),Perry(2008),Matsuzaki(2009),McKernan(2009),Bentley(2008),Park(2010),Wheeler(2008),Mills(2006))" 26 2203 NPHP1#id_known 1 "3447691(504|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Wang(2007),Gusev(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401736BF male "research_filter, clinical_filter" ZRXE40373 Y 24892425 28423925 3531501 Gain 2 0.945608 1940 1821 chas 85.74 Gain 0 - 0 - Gain-- 790 0 - - "ChAS,IPN" "Yq11.23,Yq11.223" - "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 DAZ1 "3141505#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "3439008(71|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "2064(4|Matsuzaki(2009),Perry(2008))" 100 790 - 0 "3498883(70|Teague(2010),Perry(2008),Sharp(2005),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400730SH male "research_filter, clinical_filter" BCMG96058 Y 24892860 28423925 3531066 Gain 2 0.870996 1937 1823 chas 44.03 Gain 0 - 0 - Gain-- 788 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 DAZ1 "3141070#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "3439008(71|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "2064(4|Matsuzaki(2009),Perry(2008))" 100 788 - 0 "3498448(70|Teague(2010),Perry(2008),Sharp(2005),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006))" TRUE TRUE ipn_yes algo_yes NA 400013TA male "research_filter, clinical_filter" EDMQ40540 Y 24985599 28423925 3438327 Gain 2 0.874254 1932 1780 chas 51.53 Gain 0 - 0 - Gain-- 782 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 "DAZ3,DAZ2,DAZ1,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CDY1,TTTY3,CSPG4P1Y" 20 DAZ1 "3048331#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "3373151(66|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "2064(4|Matsuzaki(2009),Perry(2008))" 100 782 - 0 "3405709(70|Teague(2010),Perry(2008),Sharp(2005),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006))" TRUE TRUE ipn_yes algo_yes NA 401589HP male "research_filter, clinical_filter" WUVU37744 22 18648867 21465659 2816793 Gain 3 0.89797 3788 743 chas 42.59 Gain 71.09 Gain 76.71 Gain GainGainGain 1696 94.28 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 100001(1|contig) "P2RX6P,RIMBP3,TMEM191A,PI4KA,KLHL22,SLC7A4,LOC388849,MIR185,GNB1L,TBX1,MIR3618,MIR1306,SEPT5,GP1BB,ZNF74,P2RX6,DGCR9,PRODH,BCRP2,PI4KAP1,C22orf29,TMEM191B,DGCR2,DGCR5,DGCR6,LOC400891,C22orf39,C22orf25,DGCR6L,MED15,CRKL,TXNRD2,CLDN5,LOC150197,RTN4R,TSSK2,GSC2,ARVCF,SLC25A1,MIR4761,COMT,LOC284865,LOC729444,DGCR8,AIFM3,CLTCL1,USP18,SERPIND1,THAP7-AS1,SCARF2,HIRA,THAP7,MIR1286,RANBP1,GGT3P,POM121L4P,SNAP29,UFD1L,DGCR11,DGCR10,MRPL40,DGCR14,ZDHHC8,CDC45,TRMT2A,LZTR1,LOC150185,MGC16703,SEPT5-GP1BB" 69 "P2RX6P,RIMBP3,TMEM191A,PI4KA,KLHL22,SLC7A4,LOC388849,MIR185,GNB1L,TBX1,MIR3618,MIR1306,SEPT5,GP1BB,ZNF74,P2RX6,DGCR9,PRODH,BCRP2,PI4KAP1,C22orf29,TMEM191B,DGCR2,DGCR5,DGCR6,LOC400891,C22orf39,C22orf25,DGCR6L,MED15,CRKL,TXNRD2,CLDN5,LOC150197,RTN4R,TSSK2,GSC2,ARVCF,SLC25A1,MIR4761,COMT,LOC284865,LOC729444,DGCR8,AIFM3,CLTCL1,USP18,SERPIND1,THAP7-AS1,SCARF2,HIRA,THAP7,MIR1286,RANBP1,GGT3P,POM121L4P,SNAP29,UFD1L,DGCR11,DGCR10,MRPL40,DGCR14,ZDHHC8,CDC45,TRMT2A,LZTR1,LOC150185,MGC16703,SEPT5-GP1BB" 69 "SCARF2,TBX1,COMT,GP1BB,PRODH,RTN4R,SNAP29,SERPIND1" "2816793#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "2558299(167|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),McCarroll(2008),Park(2010))" "16119(40|Conrad(2009),Ahn(2009),Matsuzaki(2009),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 28 1696 TBX1#asd_known 1 "2816793(1184|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" IZON54653 Y 24644461 27028668 2384208 Gain 2 0.873957 1110 2149 chas 45.22 Gain 0 - 0 - Gain-- 439 0 - - "ChAS,IPN" "Yq11.23,Yq11.223" - "TTTY17A,TTTY17B,TTTY17C,GOLGA2P3Y,BPY2,TTTY4C,TTTY4B,PRY,DAZ3,DAZ2,DAZ1,DAZ4,PRY2,CDY1,GOLGA2P2Y,CSPG4P1Y,TTTY3,TTTY4,CDY1B,TTTY3B,BPY2B,BPY2C" 22 "TTTY17A,TTTY17B,TTTY17C,GOLGA2P3Y,BPY2,TTTY4C,TTTY4B,PRY,DAZ3,DAZ2,DAZ1,DAZ4,PRY2,CDY1,GOLGA2P2Y,CSPG4P1Y,TTTY3,TTTY4,CDY1B,TTTY3B,BPY2B,BPY2C" 22 DAZ1 "2384208#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "2122697(51|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "1741(3|Matsuzaki(2009),Perry(2008))" 100 439 - 0 "2351590(36|Teague(2010),Perry(2008),Sharp(2005),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400572PJ male "research_filter, clinical_filter" SLNP19984 1 145895747 147995251 2099505 Gain 3 0.905797 1396 1505 chas 68.57 Gain 82.25 Gain 85.41 Gain GainGainGain 720 NA NA NA "ChAS,IPN,NXS,PTK" "1q21.1,1q21.2" 100002(2|clone) "PPIAL4A,ACP6,FLJ39739,PRKAB2,CHD1L,FMO5,GJA8,NBPF24,PDZK1P1,PDIA3P,LOC728989,PPIAL4B,BCL9,NBPF11,GPR89B,GPR89C,LOC100289211,GJA5" 18 "PPIAL4A,ACP6,FLJ39739,PRKAB2,CHD1L,FMO5,GJA8,NBPF24,PDZK1P1,PDIA3P,LOC728989,PPIAL4B,BCL9,NBPF11,GPR89B,GPR89C,LOC100289211,GJA5" 18 "GJA8,GJA5" "1256948#3%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871,""1q21.1 recurrent microdeletion (susceptility locus for neurodevelopmental disorders)"":1224571,""1q21.1 recurrent microduplication (possible susceptiblity locus for neurodevelopmental disorders)"":1224571" "1557694(3|Kidd(2008),Ahn(2009),Korbel(2007))" "1167411(73|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Matsuzaki(2009),Pinto(2007),McCarroll(2008),Park(2010),Wheeler(2008),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "2562(8|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Bentley(2008),Mills(2006))" 54 720 - 0 "2099505(281|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" UYMD11362 4 136374837 138425358 2050522 Loss 1 0.934933 1306 1571 chas 100 Loss 99.77 Loss 100 Loss LossLossLoss 1313 99.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "307378(60|Wang(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),McKernan(2009),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),Mills(2006))" "5164(13|Ahn(2009),Perry(2008),Matsuzaki(2009),Levy(2007),McKernan(2009),Pang(2010),Park(2010),Shaikh(2009),Mills(2006))" 0 1313 - 0 "1440533(339|Teague(2010),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Conrad(2006),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400030WD female "research_filter, clinical_filter" UYAI76550 10 46287822 48298893 2011072 Gain 3 0.884472 280 7208 chas 14.03 Gain 19.32 Gain 38.52 Gain GainGainGain 438 4.36 Gain IP6 "ChAS,IPN,NXS,PTK" 10q11.22 300004(4|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "2011072(165|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 438 - 0 "2011072(735|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" VKJV88264 10 46292023 48298893 2006871 Gain 3 0.890827 278 7245 chas 0 - 31.32 Gain 36.03 Gain #NAME? 438 11.92 "-,Gain" "BS,IP6" "ChAS,NXS,PTK" 10q11.22 300004(4|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21B,SYT15,FAM25C,FAM25B,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,LOC728643,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 23 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21B,SYT15,FAM25C,FAM25B,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,LOC728643,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 23 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "2006871(165|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 438 - 0 "2006871(735|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" KJKF45195 10 46287822 48203688 1915867 Gain 3 0.886385 274 7017 chas 1.07 Gain 40.09 Gain 49.04 Gain GainGainGain 438 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 300004(4|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1915867(160|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 438 - 0 "1915867(725|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401132CH male "research_filter, clinical_filter" QVOH35939 10 46287822 48203688 1915867 Gain 3 0.893012 274 7017 chas 5.43 Gain 29.79 Gain 38.91 Gain GainGainGain 438 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 300004(4|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1915867(160|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 438 - 0 "1915867(725|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" JITZ20982 10 46287838 48174779 1886942 Gain 3 0.898066 271 6988 chas 5.73 Gain 17.66 Gain 39.93 Gain GainGainGain 437 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 300004(4|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,CTSL1P2,ANTXRL" 24 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1886942(157|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 437 - 0 "1886942(723|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401180GR male "research_filter, clinical_filter" UKBP75340 16 32038694 33912324 1873631 Gain 3 0.880082 188 10019 chas 0.58 Gain 72.51 Gain 80.16 Gain GainGainGain 303 44.64 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - "1350167(3|Kidd(2008),Ahn(2009))" "1873631(178|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 90 303 - 0 "1873631(1107|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" EMKM20452 16 32038694 33912324 1873631 Gain 3 0.901127 188 10019 chas 0 - 90.01 Gain 90.1 Gain #NAME? 303 90.32 Gain "BS,GTC,IP6" "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - "1350167(3|Kidd(2008),Ahn(2009))" "1873631(178|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 90 303 - 0 "1873631(1107|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" JORC32909 16 32038694 33912324 1873631 Gain 3 0.885539 188 10019 chas 0 - 86.88 Gain 89.59 Gain #NAME? 303 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - "1350167(3|Kidd(2008),Ahn(2009))" "1873631(178|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 90 303 - 0 "1873631(1107|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401086MD male "research_filter, clinical_filter" XBDZ94110 22 19954391 21798907 1844517 Gain 3 0.900022 1830 1008 chas 77.74 Gain 60.34 Gain 100 Gain GainGainGain 955 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 100001(1|contig) "TMEM191A,PI4KA,KLHL22,SLC7A4,LOC388849,POM121L8P,MIR3618,TRMT2A,P2RX6P,ZNF74,P2RX6,DGCR8,BCRP2,CRKL,HIC2,POM121L4P,TMEM191B,ARVCF,LOC400891,RTN4R,DGCR6L,MED15,RANBP1,PI4KAP1,LOC150197,RIMBP3B,RIMBP3,MIR185,COMT,LOC284865,MIR1306,SERPIND1,THAP7-AS1,SCARF2,THAP7,MIR1286,ZDHHC8,RIMBP3C,SNAP29,LOC729444,AIFM3,LZTR1,C22orf25,MGC16703" 44 "TMEM191A,PI4KA,KLHL22,SLC7A4,LOC388849,POM121L8P,MIR3618,TRMT2A,P2RX6P,ZNF74,P2RX6,DGCR8,BCRP2,CRKL,HIC2,POM121L4P,TMEM191B,ARVCF,LOC400891,RTN4R,DGCR6L,MED15,RANBP1,PI4KAP1,LOC150197,RIMBP3B,RIMBP3,MIR185,COMT,LOC284865,MIR1306,SERPIND1,THAP7-AS1,SCARF2,THAP7,MIR1286,ZDHHC8,RIMBP3C,SNAP29,LOC729444,AIFM3,LZTR1,C22orf25,MGC16703" 44 "SNAP29,RTN4R,COMT,SERPIND1,SCARF2" "1844517#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "1586023(116|Itsara(2009),Korbel(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),Mills(2006))" "9937(22|Conrad(2009),Matsuzaki(2009),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 44 955 - 0 "1844517(901|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400649PS male "research_filter, clinical_filter" JFSR33951 5 68847066 70654059 1806994 Loss 1 0.889209 14 138999 chas 0 - 0 - 0 - --- 25 0 - - ChAS 5q13.2 - "SERF1A,SMN2,LOC100272216,SMA5,SMA4,GTF2H2B,GTF2H2C,NAIP,GUSBP9,GTF2H2D,SERF1B,GUSBP3,GTF2H2,OCLN,LOC100170939,SMN1,LOC647859" 17 "SERF1A,SMN2,LOC100272216,SMA5,SMA4,GTF2H2B,GTF2H2C,NAIP,GUSBP9,GTF2H2D,SERF1B,GUSBP3,GTF2H2,OCLN,LOC100170939,SMN1,LOC647859" 17 "OCLN,SMN2,SMN1" - 669117(2|Kidd(2008)) "1806994(111|Sebat(2004),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),Kim(2009))" - 100 25 - 0 "1806994(998|Sebat(2004),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Kim(2009),Perry(2008b),Kidd(2008),Park(2010),Durbin(2010),Pang(2010),Locke(2006),Wilson(2010),Cooper(2008),Campbell(2011),Pinto(2011),Redon(2006),McKernan(2009),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400444MM female - WHSN55625 16 32027965 33814547 1786583 Gain 3 0.889266 188 9553 chas 0 - 42.12 Gain 40.9 Gain #NAME? 293 22.94 Gain "BS,IP6" "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - 1313604(2|Kidd(2008)) "1786583(169|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 293 - 0 "1786583(1049|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" ORNW53006 16 32038694 33814547 1775854 Gain 3 0.910386 184 9704 chas 3.07 Gain 54.82 Gain 92.04 Gain GainGainGain 289 96.55 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - 1313604(2|Kidd(2008)) "1775854(169|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 289 - 0 "1775854(1048|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400494ML female "research_filter, clinical_filter" ENVJ37912 16 32038694 33814547 1775854 Loss 1 0.873354 184 9704 chas 0 - 1.63 Loss 20.18 Loss #NAME? 289 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - 1313604(2|Kidd(2008)) "1775854(169|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008))" "10850(29|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 289 - 0 "1775854(1048|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400532MH male "research_filter, clinical_filter" SXXB40252 10 46287822 48006310 1718489 Gain 3 0.89001 256 6739 chas 1.2 Gain 41.56 Gain 45.53 Gain GainGainGain 434 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,ANTXRL" 23 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,ANTXRL" 23 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1718489(146|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 434 - 0 "1718489(693|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401495NR male "research_filter, clinical_filter" XREB60973 10 46287822 48006310 1718489 Gain 3 0.910227 256 6739 chas 6.05 Gain 28.57 Gain 59.37 Gain GainGainGain 434 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,ANTXRL" 23 "GPRIN2,LOC643650,PTPN20B,PTPN20A,FAM35B,FAM21C,FAM21B,SYT15,FAM25C,LOC728643,FAM25G,LOC642826,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP4,FAM25B,BMS1P1,AGAP9,BMS1P5,PPYR1,ANTXRL" 23 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1718489(146|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "6155(28|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 434 - 0 "1718489(693|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" XUMQ23395 13 92530159 94239571 1709413 Gain 3 0.898393 3624 471 chas 97.67 Gain 100 Gain 100 Gain GainGainGain 1232 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.3 - "GPC5,GPC6" 2 "GPC5,GPC6" 2 GPC6 - - "243871(22|Wang(2007),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009))" "1993(7|Levy(2007),McKernan(2009),Ahn(2009),Wheeler(2008),Matsuzaki(2009))" 14 1231 - 0 "1201795(133|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2011),Redon(2006),Teague(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401875FG male "research_filter, clinical_filter" UFYD24142 X 6458870 8135644 1676775 Gain 3 0.911139 4390 382 chas 99.07 Gain 0 - 0 - Gain-- 1241 NA NA NA "ChAS,IPN" Xp22.31 50001(1|clone) "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 STS "1676775#1%""Steroid sulphatase deficiency (STS)"":1725741" - "1262624(44|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pinto(2007),Shaikh(2009),Tuzun(2005),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1509(8|de Smith(2007),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 6 1241 - 0 "1371073(71|Teague(2010),Redon(2006),Perry(2008),Wang(2007),Levy(2007),Conrad(2006),McCarroll(2006),Durbin(2010),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Tuzun(2005),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400313DF female "research_filter, clinical_filter" IAEL45337 X 6501550 8135644 1634095 Gain 3 0.912905 4293 380 chas 96.2 Gain 0 - 0 - Gain-- 1203 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 50001(1|clone) "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 STS "1634095#1%""Steroid sulphatase deficiency (STS)"":1725741" - "1219944(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1256(7|de Smith(2007),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 6 1203 - 0 "1328393(65|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Shaikh(2009),Jakobsson(2008),Bentley(2008),Teague(2010),McCarroll(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" DZXX36994 15 33856771 35372508 1515738 Gain 3 0.896602 1556 974 chas 98.31 Gain 99.92 Gain 100 Gain GainGainGain 1162 NA NA NA "ChAS,IPN,NXS,PTK" 15q14 - "C15orf24,AVEN,AQR,MIR1233-1,RYR3,TMEM85,PGBD4,C15orf29,NOP10,LPCAT4,SLC12A6,GJD2,ACTC1,C15orf55,MIR1233-2,GOLGA8A,CHRM5,ZNF770,GOLGA8B" 19 "C15orf24,AVEN,AQR,MIR1233-1,RYR3,TMEM85,PGBD4,C15orf29,NOP10,LPCAT4,SLC12A6,GJD2,ACTC1,C15orf55,MIR1233-2,GOLGA8A,CHRM5,ZNF770,GOLGA8B" 19 "NOP10,SLC12A6,ACTC1" - 60782(1|Ahn(2009)) "1146221(118|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),McCarroll(2008),Park(2010),Ju(2010))" "8391(31|Conrad(2009),Ahn(2009),Conrad(2005),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Kim(2009),Mills(2006))" 17 1162 - 0 "1515738(693|Teague(2010),Redon(2006),Wang(2007),Wang(2008),Iafrate(2004),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Tuzun(2005),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401005BL female "research_filter, clinical_filter" ZKCL87954 X 6620684 8135644 1514961 Gain 2 0.937004 3748 404 chas 99.62 Gain 0 - 0 - Gain-- 1122 NA NA NA "ChAS,IPN" Xp22.31 50001(1|clone) "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 STS "1514961#1%""Steroid sulphatase deficiency (STS)"":1725741" - "1100810(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1256(7|de Smith(2007),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 7 1122 - 0 "1209259(63|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Shaikh(2009),Jakobsson(2008),Bentley(2008),Teague(2010),McCarroll(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" MJBR37071 X 6671974 8135644 1463671 Gain 2 0.935924 3364 435 chas 96.99 Gain 0 - 0 - Gain-- 1096 NA NA NA "ChAS,IPN" Xp22.31 50001(1|clone) "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 "HDHD1,STS,MIR4767,PNPLA4,VCX,MIR651" 6 STS "1463671#1%""Steroid sulphatase deficiency (STS)"":1725741" - "1049520(35|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1256(7|de Smith(2007),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 7 1096 - 0 "1157969(63|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Shaikh(2009),Jakobsson(2008),Bentley(2008),Teague(2010),McCarroll(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" TASV63603 16 14897626 16330672 1433047 Gain 3 0.896091 2030 706 chas 86.45 Gain 64.18 Gain 76.34 Gain GainGainGain 678 99.99 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.11 - "MYH11,NTAN1,FOPNL,NDE1,NPIP,ABCC6P2,C16orf45,MIR3179-3,KIAA0430,NOMO3,NOMO1,MIR3179-2,RRN3,MIR3180-4,MIR3179-1,MIR3180-2,MIR3180-3,MIR484,MIR3180-1,PDXDC1,MPV17L,ABCC6,ABCC1" 23 "MYH11,NTAN1,FOPNL,NDE1,NPIP,ABCC6P2,C16orf45,MIR3179-3,KIAA0430,NOMO3,NOMO1,MIR3179-2,RRN3,MIR3180-4,MIR3179-1,MIR3180-2,MIR3180-3,MIR484,MIR3180-1,PDXDC1,MPV17L,ABCC6,ABCC1" 23 "NDE1,MYH11,ABCC6" "779795#2%""16p13.11 recurrent microduplication (uncertain significance)"":779795,""16p13.11 recurrent microdeletion (MR/MCA susceptibility locus)"":779795" "148549(5|Kidd(2008),Tuzun(2005))" "904660(71|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Gusev(2009),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Wheeler(2008),Ju(2010),Kim(2009),Shaikh(2009))" "3561(8|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Park(2010),Kim(2009))" 42 678 - 0 "1433047(288|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Tuzun(2005),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Gusev(2009),Kidd(2008),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" SAHS24305 2 55749563 57168016 1418454 Gain 3 0.890316 1170 1213 chas 93.83 Gain 97.7 Gain 100 Gain GainGainGain 998 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.1 - "MIR216B,CCDC104,MIR216A,EFEMP1,PNPT1,MIR217,SMEK2,CCDC85A" 8 "MIR216B,CCDC104,MIR216A,EFEMP1,PNPT1,MIR217,SMEK2,CCDC85A" 8 EFEMP1 - - "299284(45|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" "3644(11|Ahn(2009),Perry(2008),Wang(2008),Bentley(2008),Park(2010),Wheeler(2008),Kim(2009))" 0 998 - 0 "1094865(172|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" KECG80750 13 23519917 24936848 1416932 Loss 1 0.921752 1608 881 chas 99.41 Loss 98.13 Loss 98.38 Loss LossLossLoss 1223 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q12.12 - "SPATA13,C1QTNF9,C1QTNF9B,SGCG,C1QTNF9B-AS1,MIPEP,SACS,LINC00327,MIR2276,TNFRSF19" 10 "SPATA13,C1QTNF9,C1QTNF9B,SGCG,C1QTNF9B-AS1,MIPEP,SACS,LINC00327,MIR2276,TNFRSF19" 10 "SGCG,SACS" - - "1416932(40|Wang(2007),Matsuzaki(2009),Conrad(2009),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),McCarroll(2008))" "6807(21|Conrad(2009),Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Altshuler(2010),Wheeler(2008),Mills(2006))" 9 1223 - 0 "1416932(202|Teague(2010),Conrad(2009),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400893ZE male "research_filter, clinical_filter" TCSA61368 17 14078264 15479940 1401677 Loss 1 0.935264 1340 1046 chas 99 Loss 95.6 Loss 99.36 Loss LossLossLoss 1167 99.32 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p12 - "PMP22,CDRT15,FAM18B2-CDRT4,FAM18B2,TEKT3,MGC12916,CDRT4,MIR4731,CDRT7,HS3ST3B1,COX10" 11 "PMP22,CDRT15,FAM18B2-CDRT4,FAM18B2,TEKT3,MGC12916,CDRT4,MIR4731,CDRT7,HS3ST3B1,COX10" 11 "COX10,PMP22" "1355775#2%""Charcot-Marie-Tooth syndrome type 1A (CMT1A)"":1465432,""Hereditary Liability to Pressure Palsies (HNPP)"":1465432" - "1371438(38|Wang(2007),Ahn(2009),Itsara(2009),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Wheeler(2008),Shaikh(2009))" "3212(16|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010))" 6 1167 - 0 "625641(180|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Wang(2007),Kidd(2008),Wilson(2010),Altshuler(2010),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" ZQHJ50767 10 46292023 47692945 1400923 Gain 3 0.888771 252 5581 chas 14.52 Gain 53.81 Gain 54.33 Gain GainGainGain 402 3.48 Gain IP6 "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,FAM25G,FAM25C,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 20 "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,FAM25G,FAM25C,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 20 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1400923(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "5166(24|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 402 - 0 "1400923(667|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" DEXW71048 10 46287822 47688677 1400856 Gain 3 0.885397 252 5581 chas 6.51 Gain 33.98 Gain 51.92 Gain GainGainGain 399 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 21 "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 21 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1400856(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "5166(24|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 399 - 0 "1400856(667|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400833BB male "research_filter, clinical_filter" STES59258 10 46287822 47688677 1400856 Gain 3 0.888267 252 5581 chas 1.45 Gain 19.7 Gain 51.91 Gain GainGainGain 399 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 21 "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 21 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1400856(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "5166(24|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 399 - 0 "1400856(667|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" JABM59002 10 46292023 47688677 1396655 Gain 3 0.877317 250 5609 chas 7.14 Gain 6.82 Gain 51.89 Gain GainGainGain 399 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,FAM25G,FAM25C,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 20 "ANTXRL,ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,FAM25G,FAM25C,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 20 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1396655(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "5166(24|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 399 - 0 "1396655(667|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400328LM female "research_filter, clinical_filter" FCFF79727 16 32524716 33912324 1387609 Gain 3 0.876217 185 7541 chas 0 - 16.46 Gain 0 - -Gain- 233 NA NA NA "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - "979285(3|Kidd(2008),Ahn(2009))" "1387609(131|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 89 233 - 0 "1387609(868|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401384BP male "research_filter, clinical_filter" GNZH35610 16 32524765 33912324 1387560 Gain 3 0.922912 184 7582 chas 42.97 Gain 93.44 Gain 93.44 Gain GainGainGain 233 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - "979236(3|Kidd(2008),Ahn(2009))" "1387560(131|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 89 233 - 0 "1387560(868|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402029KJ male "research_filter, clinical_filter" IZON54653 Y 27040718 28423206 1382489 Gain 2 0.874638 880 1572 chas 71.06 Gain 0 - 0 - Gain-- 373 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CDY1,TTTY3,CSPG4P1Y" 19 "DAZ3,DAZ2,TTTY17C,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CDY1,TTTY3,CSPG4P1Y" 19 - "993212#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "1317313(25|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "703(2|Matsuzaki(2009),Perry(2008))" 100 373 - 0 "1382489(39|Perry(2008),Sharp(2005),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400572PJ male "research_filter, clinical_filter" HEJH85210 22 23690388 25066472 1376085 Gain 3 0.896663 1448 950 chas 96.74 Gain 91.79 Gain 95.77 Gain GainGainGain 802 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.23 - "GUSBP11,MMP11,SLC2A11,MIF,SPECC1L,UPB1,CHCHD10,ZNF70,VPREB3,C22orf13,ADORA2A,BCRP3,CABIN1,DDTL,RGL4,LOC391322,GSTTP1,GSTTP2,DERL3,C22orf15,SUSD2,SMARCB1,LOC284889,DDT,GGT1,GGT5,SNRPD3,GSTT2B,GSTT2,GSTT1,FAM211B,C22orf43,POM121L9P,POM121L10P,ZDHHC8P1,C22orf45,IGLL1,CES5AP1" 38 "GUSBP11,MMP11,SLC2A11,MIF,SPECC1L,UPB1,CHCHD10,ZNF70,VPREB3,C22orf13,ADORA2A,BCRP3,CABIN1,DDTL,RGL4,LOC391322,GSTTP1,GSTTP2,DERL3,C22orf15,SUSD2,SMARCB1,LOC284889,DDT,GGT1,GGT5,SNRPD3,GSTT2B,GSTT2,GSTT1,FAM211B,C22orf43,POM121L9P,POM121L10P,ZDHHC8P1,C22orf45,IGLL1,CES5AP1" 38 "IGLL1,SPECC1L,SMARCB1,UPB1,MIF" "5842#1%""22q11.2 distal deletion syndrome"":1580382" - "777761(170|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "6273(23|Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Park(2010),Wheeler(2008),Kim(2009),Mills(2006))" 37 802 - 0 "1376085(878|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Tuzun(2005),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" INSC49339 7 88146319 89518944 1372626 Gain 3 0.916351 1228 1118 chas 97.4 Gain 99.55 Gain 99.65 Gain GainGainGain 903 NA NA NA "ChAS,IPN,NXS,PTK" "7q21.13,7q21.12" - "C7orf62,ZNF804B" 2 "C7orf62,ZNF804B" 2 - - 1742(1|Ahn(2009)) "1372626(23|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009))" "105(2|Levy(2007),Shaikh(2009))" 0 903 - 0 "1372626(112|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Teague(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" SYKZ99867 16 32564736 33912324 1347589 Loss 1 0.873611 178 7613 chas 2.13 Loss 1.76 Loss 7.83 Loss LossLossLoss 227 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - "939265(3|Kidd(2008),Ahn(2009))" "1347589(127|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 91 227 - 0 "1347589(839|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402065BG male "research_filter, clinical_filter" PCKY38343 16 32570986 33912324 1341339 Gain 3 0.904763 176 7664 chas 26.04 Gain 22 Gain 93.22 Gain GainGainGain 223 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - "933015(3|Kidd(2008),Ahn(2009))" "1341339(126|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 223 - 0 "1341339(836|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400127MD male "research_filter, clinical_filter" GUZB61909 10 46966534 48298893 1332360 Gain 3 0.9054 276 4844 chas 15.27 Gain 65.08 Gain 55.4 Gain GainGainGain 398 11.52 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401029SD_1 female "research_filter, clinical_filter" QUGL52736 10 46966534 48298893 1332360 Gain 3 0.881678 276 4844 chas 7.8 Gain 75.36 Gain 91.49 Gain GainGainGain 398 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401780BB male "research_filter, clinical_filter" OTMU34006 10 46966534 48298893 1332360 Gain 3 0.87675 276 4844 chas 1.55 Gain 25.14 Gain 55.36 Gain GainGainGain 398 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402038MR male "research_filter, clinical_filter" IPKK73915 10 46966534 48298893 1332360 Gain 3 0.88509 276 4844 chas 0 - 16.94 Gain 53.61 Gain #NAME? 398 10.08 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" EMAP66239 10 46966534 48298893 1332360 Gain 3 0.910411 276 4844 chas 0 - 53.29 Gain 53.61 Gain #NAME? 398 6.51 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401618HR male "research_filter, clinical_filter" TUOI10912 10 46966534 48298893 1332360 Gain 3 0.900102 276 4844 chas 0 - 54.48 Gain 55.4 Gain #NAME? 398 NA NA NA "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1332360(136|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 66 398 - 0 "1332360(653|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401792KR male "research_filter, clinical_filter" DLWB63913 10 46287822 47609552 1321731 Gain 3 0.88606 249 5329 chas 1.56 Gain 37.12 Gain 72.43 Gain GainGainGain 273 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 20 "ANXA8,LOC642826,LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B2,FAM35B,ANXA8L1,LOC728643,FAM25C,FAM25G,AGAP9,AGAP4,FAM25B,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 20 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1321731(106|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "4256(15|Ahn(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 74 273 - 0 "1321731(606|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401606CG female "research_filter, clinical_filter" PDHC59420 10 46966534 48279862 1313329 Gain 3 0.890115 275 4793 chas 7.92 Gain 56.27 Gain 56.27 Gain GainGainGain 398 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1313329(135|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 65 398 - 0 "1313329(649|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" XBDZ94110 22 18644543 19951369 1306827 Gain 3 0.900649 1958 667 chas 77.38 Gain 80.92 "Gain,Loss" 97.88 Gain "GainGain,LossGain" 759 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "GNB1L,TBX1,SEPT5,GP1BB,DGCR9,PRODH,C22orf29,DGCR2,DGCR5,DGCR6,C22orf39,TXNRD2,CLDN5,TSSK2,GSC2,SLC25A1,MIR4761,COMT,CLTCL1,USP18,HIRA,GGT3P,UFD1L,DGCR11,DGCR10,MRPL40,DGCR14,CDC45,LOC150185,SEPT5-GP1BB" 30 "GNB1L,TBX1,SEPT5,GP1BB,DGCR9,PRODH,C22orf29,DGCR2,DGCR5,DGCR6,C22orf39,TXNRD2,CLDN5,TSSK2,GSC2,SLC25A1,MIR4761,COMT,CLTCL1,USP18,HIRA,GGT3P,UFD1L,DGCR11,DGCR10,MRPL40,DGCR14,CDC45,LOC150185,SEPT5-GP1BB" 30 "PRODH,TBX1,COMT,GP1BB" "1306827#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "1306827(78|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Ju(2010),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Zogopoulos(2007),Simon-Sanchez(2007),Mills(2006))" "7677(21|Conrad(2009),Ahn(2009),Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Park(2010))" 25 759 TBX1#asd_known 1 "1306827(569|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400649PS male "research_filter, clinical_filter" YWQF89241 10 46966534 48270746 1304213 Gain 3 0.894119 274 4777 chas 15.6 Gain 28.77 Gain 56.02 Gain GainGainGain 398 39.37 "-,Gain" "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1304213(135|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 65 398 - 0 "1304213(647|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" HAGL80690 16 32511179 33814547 1303369 Loss 1 0.881535 182 7200 chas 4.9 Loss 18.21 Loss 30.31 Loss LossLossLoss 220 85.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 956259(2|Kidd(2008)) "1303369(123|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "7511(18|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 91 220 - 0 "1303369(816|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" IAEL45337 16 32511179 33814547 1303369 Loss 1 0.882364 182 7200 chas 4.9 Loss 16.99 Loss 30.32 Loss LossLossLoss 220 85.4 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 956259(2|Kidd(2008)) "1303369(123|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "7511(18|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 91 220 - 0 "1303369(816|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" KKRR12131 16 32511179 33801383 1290205 Loss 1 0.888692 178 7289 chas 2.22 Loss 10.36 Loss 88.02 Loss LossLossLoss 218 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 956259(2|Kidd(2008)) "1290205(123|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "7511(18|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 91 218 - 0 "1290205(813|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" XUMQ23395 16 32524765 33814547 1289783 Loss 1 0.878799 180 7205 chas 2.67 Loss 2.2 Loss 4.45 Loss LossLossLoss 219 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 942673(2|Kidd(2008)) "1289783(122|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 219 - 0 "1289783(809|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401875FG male "research_filter, clinical_filter" JWHR52164 16 32524765 33814547 1289783 Loss 1 0.864134 180 7205 chas 0 - 11.99 Loss 58.41 Loss #NAME? 219 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 942673(2|Kidd(2008)) "1289783(122|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 219 - 0 "1289783(809|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400984LD female "research_filter, clinical_filter" KZTP77176 10 46966534 48252675 1286142 Gain 3 0.893534 272 4745 chas 0 - 57.28 Gain 57.35 Gain #NAME? 398 9.7 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1286142(132|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 64 398 - 0 "1286142(644|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" MTFT89424 16 32524716 33801383 1276668 Gain 3 0.875092 177 7253 chas 0 - 50.43 Gain 87.1 Gain #NAME? 217 100 Gain "BS,GTC" "ChAS,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 942722(2|Kidd(2008)) "1276668(122|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 217 - 0 "1276668(806|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" ORMZ25698 16 32524765 33801383 1276619 Loss 1 0.878041 176 7294 chas 2.16 Loss 9.52 Loss 62.51 Loss LossLossLoss 217 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 942673(2|Kidd(2008)) "1276619(122|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 217 - 0 "1276619(806|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400600DP female "research_filter, clinical_filter" QNLU68354 16 32538259 33814547 1276289 Gain 3 0.873632 179 7170 chas 0 - 0 - 0 - --- 217 NA NA NA ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 929179(2|Kidd(2008)) "1276289(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 93 217 - 0 "1276289(789|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401829FJ female clinical_filter VOAZ29383 16 32538293 33801383 1263091 Gain 3 0.866072 174 7301 chas 0 - 5.41 Gain 0 - -Gain- 215 NA NA NA "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 929145(2|Kidd(2008)) "1263091(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 93 215 - 0 "1263091(786|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400834SS female "research_filter, clinical_filter" XSMN99460 16 32511179 33773835 1262657 Gain 3 0.870202 143 8891 chas 0 - 56.9 Gain 0 - -Gain- 214 NA NA NA "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 956259(2|Kidd(2008)) "1262657(121|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "7511(18|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 90 214 - 0 "1262657(791|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401235IA male "research_filter, clinical_filter" ZWJR15881 14 43212421 44474929 1262509 Gain 3 0.902423 928 1361 chas 100 Gain 100 Gain 100 Gain GainGainGain 732 NA NA NA "ChAS,IPN,NXS,PTK" "14q21.2,14q21.1" - - 0 - 0 - - - "865619(13|Wang(2007),Jakobsson(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),Zogopoulos(2007),Simon-Sanchez(2007),McCarroll(2008))" "1138(4|Wang(2008),Levy(2007),Perry(2008),Bentley(2008))" - 732 - 0 "1167371(112|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Levy(2007),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Pinto(2011),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" AYLS39762 12 33526429 34788041 1261613 Gain 3 0.901143 936 1349 chas 87.56 Gain 0 - 100 Gain Gain-Gain 672 100 Gain "BS,GTC,IP6" "ChAS,IPN,PTK" 12p11.1 - "ALG10,SYT10" 2 "ALG10,SYT10" 2 ALG10 - - "1261613(91|Ju(2010),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "1698(7|Kim(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 23 672 - 0 "1261613(229|Ju(2010),Redon(2006),Conrad(2009),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Teague(2010),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400663MD female "research_filter, clinical_filter" VWYL75938 16 32554242 33815554 1261313 Gain 3 0.904938 178 7126 chas 17.8 Gain 72.75 Gain 98.97 Gain GainGainGain 216 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1261313(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 215 - 0 "1261313(782|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401006ES female "research_filter, clinical_filter" LHVX52107 16 32554242 33815554 1261313 Gain 3 0.896298 178 7126 chas 0 - 39.12 Gain 100 Gain #NAME? 216 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1261313(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 215 - 0 "1261313(782|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401341TS female "research_filter, clinical_filter" NQBM70678 16 32554242 33815554 1261313 Gain 3 0.874997 178 7126 chas 0 - 0 - 0 - --- 216 32.5 Gain "BS,IP6" ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1261313(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 215 - 0 "1261313(782|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400084DM female clinical_filter MAKG95944 16 32554242 33814547 1260306 Loss 1 0.882622 176 7201 chas 2.73 Loss 29.91 Loss 76.37 Loss LossLossLoss 216 82.64 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1260306(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 215 - 0 "1260306(782|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400041LJ male "research_filter, clinical_filter" AUMQ17072 16 32554226 33810309 1256084 Gain 3 0.875285 175 7218 chas 0 - 89.75 Gain 100 Gain #NAME? 215 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913212(2|Kidd(2008)) "1256084(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 215 - 0 "1256084(782|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401856GC male "research_filter, clinical_filter" QXAY99372 10 130472020 131726895 1254876 Gain 3 0.90102 1312 957 chas 99.95 Gain 99.74 Gain 99.98 Gain GainGainGain 1053 99.92 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "10q26.3,10q26.2" - "MIR4297,EBF3,MGMT" 3 "MIR4297,EBF3,MGMT" 3 - - - "130794(10|de Smith(2007),Conrad(2009),Pang(2010),Shaikh(2009),Park(2010))" "3554(12|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Shaikh(2009),Mills(2006))" - 1052 - 0 "693562(102|Teague(2010),Ahn(2009),Wong(2007),Pinto(2011),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Park(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400040CN male "research_filter, clinical_filter" JILG60414 16 32554242 33801383 1247142 Gain 3 0.882099 172 7293 chas 0 - 4.43 Gain 47.36 Gain #NAME? 214 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1247142(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 213 - 0 "1247142(779|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400278PD male "research_filter, clinical_filter" YKER13969 16 32554242 33801383 1247142 Gain 3 0.874198 172 7293 chas 0 - 18.21 Gain 0 - -Gain- 214 NA NA NA "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1247142(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 213 - 0 "1247142(779|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401372RR male "research_filter, clinical_filter" BQFC38547 16 32554242 33801383 1247142 Gain 3 0.86953 172 7293 chas 0 - 0 - 0 - --- 214 32.87 Gain "BS,GTC,IP6" ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1247142(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 213 - 0 "1247142(779|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400238BB female clinical_filter WMBQ46007 10 46966534 48203688 1237155 Gain 3 0.88372 270 4599 chas 8.4 Gain 48.03 Gain 64.31 Gain GainGainGain 398 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1237155(131|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 63 398 - 0 "1237155(643|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" IAET85141 10 46966534 48203688 1237155 Gain 3 0.885303 270 4599 chas 0 - 17.86 Gain 59.66 Gain #NAME? 398 11.21 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1237155(131|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 63 398 - 0 "1237155(643|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401136LB male "research_filter, clinical_filter" CCNM95095 10 46966534 48203688 1237155 Gain 3 0.892813 270 4599 chas 0 - 48.04 Gain 65.27 Gain #NAME? 398 10.71 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1237155(131|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 63 398 - 0 "1237155(643|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401881TJ male "research_filter, clinical_filter" XPRZ52054 10 46966534 48203688 1237155 Gain 3 0.90778 270 4599 chas 0 - 59.66 Gain 64.31 Gain #NAME? 398 13.14 "Gain,-" BS "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1237155(131|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 63 398 - 0 "1237155(643|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400611GG male "research_filter, clinical_filter" ZRXE40373 16 32564622 33801383 1236762 Gain 3 0.872457 171 7275 chas 0 - 86.57 Gain 0 - -Gain- 211 48.1 Gain "BS,GTC,IP6" "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 902816(2|Kidd(2008)) "1236762(118|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 211 - 0 "1236762(777|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" AGIM53957 16 32554242 33789190 1234949 Gain 3 0.874391 164 7576 chas 0.88 Gain 21.53 Gain 100 Gain GainGainGain 212 42.78 "-,Gain" "BS,IP6" "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1234949(119|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 211 - 0 "1234949(776|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400564SN female "research_filter, clinical_filter" USNP20353 16 32554242 33783272 1229031 Gain 3 0.874964 156 7929 chas 0 - 0 - 0 - --- 212 33.35 Gain "BS,GTC" ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1229031(118|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 211 - 0 "1229031(773|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400082SD female clinical_filter WKAY66815 16 32554242 33774223 1219982 Gain 3 0.867586 139 8840 chas 0.89 Gain 0 - 0 - Gain-- 211 55.31 "Gain,-" "BS,IP6" "ChAS,IPN" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 913196(2|Kidd(2008)) "1219982(117|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 210 - 0 "1219982(758|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400681MC female "research_filter, clinical_filter" FISX28606 10 46966534 48179757 1213224 Gain 3 0.902149 269 4526 chas 0 - 33.7 Gain 60.84 Gain #NAME? 397 44.1 - BS "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1213224(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 62 397 - 0 "1213224(643|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400677HD male "research_filter, clinical_filter" RVIS81666 16 32564736 33774616 1209881 Gain 3 0.871911 138 8831 chas 0 - 25.7 Gain 0 - -Gain- 208 39.67 Gain BS "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 902702(2|Kidd(2008)) "1209881(116|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 94 208 - 0 "1209881(756|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" OPOQ31165 10 46966534 48174779 1208246 Gain 3 0.89514 268 4525 chas 63.62 Gain 43.62 Gain 64.8 Gain GainGainGain 397 15.51 - BS "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1208246(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 62 397 - 0 "1208246(641|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400795CL female "research_filter, clinical_filter" APBT44417 10 46966534 48174779 1208246 Gain 3 0.883738 268 4525 chas 8.61 Gain 16.2 Gain 60.71 Gain GainGainGain 397 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1208246(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 62 397 - 0 "1208246(641|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400701MM female "research_filter, clinical_filter" JMWD59875 10 46966534 48174779 1208246 Gain 3 0.885611 268 4525 chas 0 - 27.43 Gain 60.98 Gain #NAME? 397 NA NA NA "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,CTSL1P2,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 17 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1208246(128|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 62 397 - 0 "1208246(641|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402048WB female "research_filter, clinical_filter" LRBG51365 16 32538293 33742041 1203749 Gain 3 0.880277 110 11043 chas 0.91 Gain 5.69 Gain 0 - GainGain- 208 NA NA NA "ChAS,IPN,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 929145(2|Kidd(2008)) "1203749(115|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 92 208 - 0 "1203749(733|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400886MP female "research_filter, clinical_filter" RLVK87046 Y 25856645 27022375 1165731 Loss 0 0.892509 484 2413 chas 100 Loss 0 - 0 - Loss-- 328 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "DAZ3,TTTY3,TTTY4,CDY1B,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,CDY1,GOLGA2P2Y,GOLGA2P3Y,DAZ2,DAZ4,BPY2C,CSPG4P1Y" 19 "DAZ3,TTTY3,TTTY4,CDY1B,BPY2,TTTY3B,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,CDY1,GOLGA2P2Y,GOLGA2P3Y,DAZ2,DAZ4,BPY2C,CSPG4P1Y" 19 - "1165731#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "1165731(30|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 327 - 0 "1133113(21|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" MQVK42355 8 6982257 8138163 1155907 Gain 3 0.90435 64 18347 chas 3.06 Gain 4.16 Gain 0 - GainGain- 325 NA NA NA "ChAS,IPN,NXS" 8p23.1 50001(1|contig) "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 - "18869#1%""8p23.1 deletion syndrome"":3646425" "1155907(20|Giglio(2002),Kidd(2008))" "1155907(144|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Ju(2010),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Wang(2007),Ahn(2009),Cooper(2008),Tuzun(2005),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "525(3|Wheeler(2008),Matsuzaki(2009))" 92 325 - 0 "1155907(918|Sebat(2004),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Pinto(2011),Pinto(2007),Tuzun(2005),Locke(2006),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401203MP female "research_filter, clinical_filter" WYBU35088 10 46966534 48121432 1154899 Gain 3 0.890553 264 4391 chas 17.62 Gain 46.37 Gain 63.91 Gain GainGainGain 397 14.07 "Gain,-" BS "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1154899(127|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 60 397 - 0 "1154899(638|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400579HJ female "research_filter, clinical_filter" ORNW53006 8 6999220 8147599 1148380 Gain 3 0.902377 68 17140 chas 3.73 Gain 7.02 Gain 14.96 Gain GainGainGain 327 7.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.1 50001(1|contig) "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 - "28305#1%""8p23.1 deletion syndrome"":3646425" "1148380(20|Giglio(2002),Kidd(2008))" "1148380(143|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Ju(2010),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Wang(2007),Cooper(2008),Tuzun(2005),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "525(3|Wheeler(2008),Matsuzaki(2009))" 91 327 - 0 "1148380(908|Sebat(2004),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Pinto(2011),Pinto(2007),Tuzun(2005),Locke(2006),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400494ML female "research_filter, clinical_filter" ZDRZ89201 8 6999220 8137642 1138423 Gain 3 0.888076 58 19972 chas 0.93 Gain 2.4 Gain 0 - GainGain- 317 NA NA NA "ChAS,IPN,NXS" 8p23.1 50001(1|contig) "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 "FLJ10661,FAM90A14,FAM90A13,FAM90A10,FAM66E,FAM66B,FAM90A19,FAM90A18,DEFB106A,DEFB106B,DEFB104B,DEFB4B,FAM90A5,DEFB104A,LOC349196,FAM90A9,FAM90A8,MIR548I3,ZNF705G,DEFB109P1B,SPAG11B,FAM90A20,SPAG11A,FAM90A7,LOC100132396,DEFB107B,DEFB107A,DEFB4A,DEFB105A,DEFB105B,DEFB103B,DEFB103A" 32 - "18348#1%""8p23.1 deletion syndrome"":3646425" "1138423(20|Giglio(2002),Kidd(2008))" "1138423(143|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Ju(2010),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Wang(2007),Cooper(2008),Tuzun(2005),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "525(3|Wheeler(2008),Matsuzaki(2009))" 92 317 - 0 "1138423(908|Sebat(2004),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Pinto(2011),Pinto(2007),Tuzun(2005),Locke(2006),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401855RE male "research_filter, clinical_filter" JITM64437 2 110261667 111388468 1126802 Gain 3 0.901244 324 3488 chas 29.61 Gain 60.89 Gain 76.06 Gain GainGainGain 192 39.26 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q13 - "ANKRD57,LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267,SEPT10,SH3RF3" 16 "ANKRD57,LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267,SEPT10,SH3RF3" 16 NPHP1 - 142915(1|Kidd(2008)) "661123(54|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 71 192 NPHP1#id_known 1 "1065073(186|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Pinto(2011),Teague(2010),Itsara(2009),Locke(2006),Durbin(2010),Kidd(2010b),Kidd(2008),Gusev(2009),Pinto(2007),Wang(2007),Park(2010),McKernan(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400661AD male "research_filter, clinical_filter" JXQB25794 10 46996612 48121432 1124821 Gain 3 0.867999 224 5044 chas 0 - 10.31 Gain 0 - -Gain- 363 14.45 "Gain,-" "BS,IP6" "ChAS,NXS" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 15 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1124821(125|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 62 363 - 0 "1124821(627|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" WGSV83254 11 25552964 26677697 1124734 Loss 1 0.913907 1242 906 chas 99.43 Loss 100 Loss 100 Loss LossLossLoss 969 NA NA NA "ChAS,IPN,NXS,PTK" "11p14.2,11p14.3" - "MUC15,ANO3" 2 "MUC15,ANO3" 2 - - - "331170(49|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Matsuzaki(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Itsara(2009),Jakobsson(2008),Cooper(2008),McCarroll(2008),Wheeler(2008),Simon-Sanchez(2007),Mills(2006))" "4049(18|Conrad(2009),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Wang(2008),Park(2010))" 0 969 - 0 "944833(201|Wang(2007),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" ABWI37104 10 47062985 48174779 1111795 Gain 3 0.873806 148 7563 chas 9.35 Gain 14.54 Gain 20.3 Gain GainGainGain 312 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 - - "44265(3|Ahn(2009),McKernan(2009),Tuzun(2005))" "1111795(126|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 312 - 0 "1111795(593|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401200BD male "research_filter, clinical_filter" THXY16685 10 47063105 48174779 1111675 Loss 1 0.874495 147 7614 chas 9.35 Loss 10.02 Loss 12.99 Loss LossLossLoss 312 13.89 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 - - "44145(3|Ahn(2009),McKernan(2009),Tuzun(2005))" "1111675(126|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 312 - 0 "1111675(593|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" TJGR62389 10 47069606 48174779 1105174 Gain 3 0.871812 140 7950 chas 0 - 14.82 Gain 26.62 Gain #NAME? 305 9.11 Gain IP6 "ChAS,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 - - "43977(2|Ahn(2009),McKernan(2009))" "1105174(126|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 305 - 0 "1105174(584|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" ZIOC12306 5 129973058 131071386 1098329 Gain 3 0.892444 844 1302 chas 94.87 Gain 99.5 Gain 98.5 Gain GainGainGain 546 97.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "5q23.3,5q31.1" - "CDC42SE2,RAPGEF6,LYRM7,HINT1,FNIP1" 5 "CDC42SE2,RAPGEF6,LYRM7,HINT1,FNIP1" 5 - - - "5533(3|Park(2010),McKernan(2009))" "2057(7|Wang(2008),Conrad(2009),Levy(2007),McKernan(2009),Bentley(2008))" 0 546 - 0 "781436(57|Conrad(2009),Jakobsson(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Park(2010),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400852WJ male "research_filter, clinical_filter" XMAJ27378 10 47078813 48174779 1095967 Gain 3 0.87571 132 8366 chas 8.32 Gain 14.34 Gain 25.38 Gain GainGainGain 297 18.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 15 - - "43977(2|Ahn(2009),McKernan(2009))" "1095967(126|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 297 - 0 "1095967(582|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401100SJ female "research_filter, clinical_filter" DZVA59681 Y 26501373 27580257 1078885 Gain 2 0.855467 272 3981 chas 39.72 Gain 0 - 0 - Gain-- 155 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "1078885#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "1078885(26|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 155 - 0 "1078885(24|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" KXKI34745 13 64301592 65372284 1070693 Gain 3 0.904474 791 1355 chas 99.36 Gain 99.82 Gain 99.82 Gain GainGainGain 675 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.31 - OR7E156P 1 OR7E156P 1 - - "31226(2|Kidd(2008),McKernan(2009))" "853228(26|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),McKernan(2009),Pang(2010),Conrad(2009),McCarroll(2008),Shaikh(2009))" "3930(11|Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010))" 9 675 - 0 "1070693(117|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Wang(2007),Sebat(2004),Park(2010),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" RLVK87046 Y 27040718 28105811 1065094 Loss 0 0.887881 419 2548 chas 100 Loss 0 - 0 - Loss-- 283 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CDY1,TTTY3,CSPG4P1Y" 19 "DAZ3,DAZ2,TTTY17C,CDY1B,TTTY4,BPY2,TTTY3B,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CDY1,TTTY3,CSPG4P1Y" 19 - "993212#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "1065094(20|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 323(1|Matsuzaki(2009)) 100 283 - 0 "1065094(27|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" XQAG43010 4 188450075 189505920 1055846 Loss 1 0.919662 768 1376 chas 99.89 Loss 99.94 Loss 99.94 Loss LossLossLoss 767 NA NA NA "ChAS,IPN,NXS,PTK" 4q35.2 - "LOC401164,ZFP42,TRIML2,TRIML1" 4 "LOC401164,ZFP42,TRIML2,TRIML1" 4 - - 38882(1|Kidd(2008)) "1055846(81|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Tuzun(2005),McCarroll(2005),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "9139(52|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Altshuler(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 767 - 0 "1055846(264|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Tuzun(2005),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" TLUK35377 10 47121495 48174779 1053285 Gain 3 0.881821 56 19150 chas 4.61 Gain 21.41 Gain 0 - GainGain- 242 19.21 Gain "BS,GTC" "ChAS,IPN,NXS" 10q11.22 250003(3|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 14 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,CTSL1P2,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 14 - - "43977(2|Ahn(2009),McKernan(2009))" "1053285(125|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3074(18|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 71 242 - 0 "1053285(546|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" GPXE42967 10 46966534 48006310 1039777 Gain 3 0.900637 252 4142 chas 9.55 Gain 50.65 Gain 70.98 Gain GainGainGain 394 27.93 "-,Gain" "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1039777(117|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 61 394 - 0 "1039777(611|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400006DK female "research_filter, clinical_filter" DBZL89045 10 46966534 48006310 1039777 Gain 3 0.889432 252 4142 chas 10 Gain 71.98 Gain 76.51 Gain GainGainGain 394 12.58 Gain IP6 "ChAS,IPN,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1039777(117|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 61 394 - 0 "1039777(611|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400032RC female "research_filter, clinical_filter" DZXX36994 10 46966534 48006310 1039777 Gain 3 0.881516 252 4142 chas 10 Gain 26.47 Gain 93.26 Gain GainGainGain 394 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 16 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1039777(117|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 61 394 - 0 "1039777(611|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401005BL female "research_filter, clinical_filter" XSKZ13040 10 47142109 48179757 1037649 Gain 3 0.883723 49 21617 chas 10.02 Gain 15.21 Gain 21.61 Gain GainGainGain 233 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 - - "43977(2|Ahn(2009),McKernan(2009))" "1037649(119|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 73 233 - 0 "1037649(534|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401824MM female research_filter PAFA79672 16 32588892 33624461 1035570 Gain 3 0.880202 98 10675 chas 0.77 Gain 73.35 Gain 72.75 Gain GainGainGain 174 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3,LOC390705" 5 - - 871493(2|Kidd(2008)) "1035570(111|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "6607(17|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 96 174 - 0 "1035570(693|Sebat(2004),Korbel(2007),Teague(2010),Campbell(2011),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402033WD male "research_filter, clinical_filter" VTLK66107 10 46971945 48006310 1034366 Gain 3 0.864758 244 4256 chas 26.76 Gain 21.85 Gain 21.72 Gain GainGainGain 392 9.48 Gain IP6 "ChAS,IPN,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 15 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 15 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "1034366(117|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 61 392 - 0 "1034366(609|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401153HS female "research_filter, clinical_filter" UJRI14149 10 47142109 48174779 1032671 Gain 3 0.883908 48 21971 chas 2.7 Gain 14.44 Gain 15.78 Gain GainGainGain 233 15.74 "Gain,-" "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 - - "43977(2|Ahn(2009),McKernan(2009))" "1032671(119|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 73 233 - 0 "1032671(532|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400227MM female research_filter LRBG51365 10 47142109 48174779 1032671 Gain 3 0.881618 48 21971 chas 2.7 Gain 21.76 Gain 16.94 Gain GainGainGain 233 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 250003(3|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,FAM21B,CTSL1P2,AGAP9,FAM25C,FAM25B,FAM25G,ANTXRL" 13 - - "43977(2|Ahn(2009),McKernan(2009))" "1032671(119|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 73 233 - 0 "1032671(532|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400886MP female research_filter JTJC66263 11 89314008 90342373 1028366 Gain 3 0.891152 679 1516 chas 57.29 Gain 88.98 Gain 100 Gain GainGainGain 479 NA NA NA "ChAS,IPN,NXS,PTK" 11q14.3 - "LOC399939,TRIM49L1,TRIM77P,MIR4490,TRIM49L2,CHORDC1,FOLH1B,TRIM64B,LOC399940,UBTFL1,NOX4,TRIM49,NAALAD2,TRIM64,TRIM53P" 15 "LOC399939,TRIM49L1,TRIM77P,MIR4490,TRIM49L2,CHORDC1,FOLH1B,TRIM64B,LOC399940,UBTFL1,NOX4,TRIM49,NAALAD2,TRIM64,TRIM53P" 15 - - 17538(1|Kidd(2008)) "692417(63|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Wang(2008),Conrad(2009),Park(2010),Kim(2009),Shaikh(2009))" "4886(11|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),Pang(2010))" 53 479 - 0 "741051(195|Teague(2010),Ahn(2009),Wong(2007),Redon(2006),Kidd(2010),Perry(2008),Conrad(2009),Itsara(2009),Locke(2006),Wang(2008),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Wang(2007),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" PQCI84759 11 91553522 92580800 1027279 Gain 3 0.905755 1127 912 chas 99.46 Gain 99.73 Gain 99.36 Gain GainGainGain 782 99.4 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q14.3 - FAT3 1 FAT3 1 - - - "49475(7|Pang(2010),Kidd(2008),Redon(2006),Park(2010),Mills(2006))" "1917(12|Ahn(2009),Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008),Mills(2006))" 0 782 - 0 "405561(61|Teague(2010),Pang(2010),Wong(2007),Redon(2006),Wang(2008),McKernan(2009),Ahn(2009),Durbin(2010),Bentley(2008),Kidd(2010),Kidd(2008),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" JSHH93314 6 61887813 62912937 1025125 Gain 3 0.89342 942 1089 chas 89.43 Gain 65.57 Gain 100 Gain GainGainGain 522 NA NA NA "ChAS,IPN,NXS,PTK" 6q11.1 50001(1|clone) KHDRBS2 1 KHDRBS2 1 - - - "1025125(18|Sebat(2004),Matsuzaki(2009),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pinto(2007),Shaikh(2009))" "2824(14|Ahn(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Park(2010),Wheeler(2008),Mills(2006))" 6 522 - 0 "1025125(109|Conrad(2009),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Iafrate(2004),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" UDNO19569 17 31959227 32944152 984926 Gain 3 0.907933 1162 848 chas 86.83 Gain 99.25 Gain 100 Gain GainGainGain 963 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "CCL2,ACCN1,CCL13,CCL7,CCL11,CCL8,C17orf102,CCL1,TMEM132E" 9 "CCL2,ACCN1,CCL13,CCL7,CCL11,CCL8,C17orf102,CCL1,TMEM132E" 9 "CCL2,CCL11" - - "84619(15|Conrad(2009),Matsuzaki(2009),de Smith(2007),Pang(2010),Wang(2008),Park(2010),Shaikh(2009))" "3617(10|Conrad(2009),Matsuzaki(2009),Levy(2007),McKernan(2009),Pang(2010),Park(2010))" 1 963 - 0 "977033(84|Conrad(2009),Wong(2007),Kidd(2008),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401766MR male "research_filter, clinical_filter" PSUS84601 X 65057520 66024540 967021 Gain 3 0.909085 575 1684 chas 100 Gain 0 - 0 - Gain-- 555 98.72 Gain "BS,GTC,IP6" "ChAS,IPN" Xq12 - "MIR223,VSIG4,EDA2R,HEPH" 4 "MIR223,VSIG4,EDA2R,HEPH" 4 - - - "321374(4|Pang(2010),Park(2010),Shaikh(2009),Zogopoulos(2007))" 4(4|Levy(2007)) 1 555 - 0 "967021(37|Teague(2010),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" EIKI77114 3 1217613 2172515 954903 Gain 3 0.894217 996 959 chas 98.3 Gain 99.99 Gain 100 Gain GainGainGain 970 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.3 - "CNTN6,CNTN4" 2 "CNTN6,CNTN4" 2 - - - "767514(54|Conrad(2009),Shaikh(2009),McKernan(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "5039(21|Conrad(2009),Perry(2008),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Shaikh(2009))" - 969 CNTN4#asd_candidate 1 "954903(236|Teague(2010),Redon(2006),Ju(2010),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" DQOA73385 8 901237 1854917 953681 Gain 3 0.902174 1176 811 chas 82.29 Gain 87.68 Gain 100 Gain GainGainGain 786 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - "DLGAP2,ARHGEF10,MIR596,LOC286083,CLN8" 5 "DLGAP2,ARHGEF10,MIR596,LOC286083,CLN8" 5 "ARHGEF10,CLN8" - - "341680(138|Wang(2007),Korbel(2007),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Park(2010),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Itsara(2009),Kim(2009),Shaikh(2009))" "28267(123|Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Kim(2009),Mills(2006))" 4 786 DLGAP2#asd_candidate 1 "803684(671|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Banerjee(2011),Wang(2007),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401592NR male "research_filter, clinical_filter" QXHS37749 16 32848683 33801383 952701 Gain 3 0.877345 164 5844 chas 0 - 13.47 Gain 0 - -Gain- 154 NA NA NA "ChAS,NXS" 16p11.2 - "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 - - 632318(1|Kidd(2008)) "952701(88|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 97 154 - 0 "952701(626|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401943KA male "research_filter, clinical_filter" XUMQ23395 Y 6680233 7614955 934723 Gain 2 0.934088 689 1358 chas 98.99 Gain 0 - 0 - Gain-- 492 NA NA NA "ChAS,IPN" Yp11.2 - "PRKY,TBL1Y,TTTY16,AMELY" 4 "PRKY,TBL1Y,TTTY16,AMELY" 4 - - - 35233(6|Matsuzaki(2009)) - 39 492 - 0 "934723(5|Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401875FG male "research_filter, clinical_filter" PNEQ37885 Y 18921311 19854820 933510 Gain 2 0.919202 422 2217 chas 99.95 Gain 0 - 0 - Gain-- 455 NA NA NA "ChAS,IPN" "Yq11.222,Yq11.221" - "FAM41AY1,LINC00230B,LINC00230A,FAM41AY2" 4 "FAM41AY1,LINC00230B,LINC00230A,FAM41AY2" 4 - - - 7842(2|Matsuzaki(2009)) - 31 455 - 0 823338(12|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" TKWO78971 16 32848683 33781671 932989 Gain 3 0.87382 140 6712 chas 0 - 67.14 Gain 99.98 Gain #NAME? 152 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 - - 632318(1|Kidd(2008)) "932989(87|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 97 152 - 0 "932989(620|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401368WR male "research_filter, clinical_filter" LTTD14271 10 47076674 48006310 929637 Gain 3 0.872506 122 7682 chas 10.04 Gain 11.94 Gain 49.55 Gain GainGainGain 298 17.58 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 - - "43977(2|Ahn(2009),McKernan(2009))" "929637(115|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 298 - 0 "929637(552|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" ERUW26412 10 47077895 48006310 928416 Gain 3 0.875646 120 7801 chas 0 - 17.09 Gain 18.58 Gain #NAME? 296 NA NA NA "ChAS,NXS,PTK" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 - - "43977(2|Ahn(2009),McKernan(2009))" "928416(115|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 296 - 0 "928416(552|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401308LD male "research_filter, clinical_filter" XWKR95070 10 47081508 48006310 924803 Gain 3 0.870099 108 8643 chas 9.57 Gain 13.3 Gain 0 - GainGain- 288 17.23 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 10q11.22 200002(2|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 14 - - "43977(2|Ahn(2009),McKernan(2009))" "924803(115|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "4467(25|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 68 288 - 0 "924803(552|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" QBXB16173 6 162358262 163268904 910643 Loss 1 0.919364 1132 805 chas 100 Loss 99.98 Loss 100 Loss LossLossLoss 741 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - "PACRG,PARK2" 2 "PACRG,PARK2" 2 PARK2 - - "875000(68|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "7467(20|Ahn(2009),Perry(2008),Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008))" - 741 PARK2#asd_candidate 1 "910643(150|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" UYMD11362 4 116852330 117759945 907616 Gain 3 0.912062 616 1475 chas 99.97 Gain 99.98 Gain 99.98 Gain GainGainGain 578 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q26 - MIR1973 1 MIR1973 1 - - - "223557(12|Korbel(2007),Conrad(2005),Perry(2008),McKernan(2009),Matsuzaki(2009),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" "2735(15|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Park(2010),Wheeler(2008),Mills(2006))" 1 578 - 0 "684924(112|Banerjee(2011),Ahn(2009),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Perry(2008b),Park(2010),Pinto(2011),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400030WD female "research_filter, clinical_filter" PWPH55056 Y 26526199 27431088 904890 Gain 2 0.860214 144 6327 chas 44.43 Gain 0 - 0 - Gain-- 96 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "904890#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "904890(19|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 96 - 0 "904890(17|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401804FG male "research_filter, clinical_filter" XOPW74186 10 47102896 48006310 903415 Gain 3 0.877215 72 12724 chas 0 - 33.58 Gain 24.87 Gain #NAME? 261 17.99 "Gain,-" "BS,GTC,IP6" "ChAS,NXS,PTK" 10q11.22 200002(2|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 13 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L2,ANXA8L1,AGAP9,FAM21B,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 13 - - "43977(2|Ahn(2009),McKernan(2009))" "903415(114|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3074(18|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 70 261 - 0 "903415(521|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" UIPG73190 4 117260708 118157877 897170 Loss 1 0.913264 616 1458 chas 99.4 Loss 99.7 Loss 99.7 Loss LossLossLoss 573 NA NA NA "ChAS,IPN,NXS,PTK" 4q26 - TRAM1L1 1 TRAM1L1 1 - - - "25533(9|Korbel(2007),Perry(2008),Matsuzaki(2009),McKernan(2009),Kidd(2008),McCarroll(2008),Park(2010))" "2116(9|Conrad(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Park(2010),Wheeler(2008),Mills(2006))" 0 573 - 0 "529698(83|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Wong(2007),Perry(2008b),Park(2010),Jakobsson(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401809FU female "research_filter, clinical_filter" CAEK98371 10 46256560 47149411 892852 Gain 3 0.885525 240 3735 chas 0 - 17.75 Gain 0 - -Gain- 211 24.33 "Gain,-" "BS,GTC" "ChAS,NXS" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "65118(8|Ahn(2009),Korbel(2007),McKernan(2009),Pang(2010),Kidd(2008),Tuzun(2005))" "892852(68|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 74 211 - 0 "892852(347|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Teague(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Kidd(2010b),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" YQAG97358 4 91625158 92512608 887451 Loss 1 0.904849 732 1214 chas 99.26 Loss 99.57 Loss 99.57 Loss LossLossLoss 578 NA NA NA "ChAS,IPN,NXS,PTK" 4q22.1 - FAM190A 1 FAM190A 1 - - - "126577(44|Wang(2007),McKernan(2009),Ju(2010),Conrad(2005),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Wheeler(2008),Shaikh(2009),Mills(2006))" "3486(9|de Smith(2007),Park(2010),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 0 578 - 0 "838933(142|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Iafrate(2004),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401499JR male "research_filter, clinical_filter" GBQV50998 17 71814071 72690517 876447 Gain 3 0.900093 676 1298 chas 94.18 Gain 97.72 Gain 98.86 Gain GainGainGain 586 NA NA NA "ChAS,IPN,NXS,PTK" 17q25.1 - "RAB37,DNAI2,C17orf77,LINC00469,RPL38,MGC16275,CD300LF,GPR142,CD300LB,TTYH2,CD300LD,CD300C,BTBD17,CD300A,KIF19,GPRC5C,CD300E" 17 "RAB37,DNAI2,C17orf77,LINC00469,RPL38,MGC16275,CD300LF,GPR142,CD300LB,TTYH2,CD300LD,CD300C,BTBD17,CD300A,KIF19,GPRC5C,CD300E" 17 DNAI2 - - "876447(11|Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Itsara(2009),Pinto(2007),Wheeler(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "894(9|Wang(2008),Levy(2007),Ahn(2009),Wheeler(2008),Bentley(2008))" - 586 - 0 "876447(85|Teague(2010),Ahn(2009),Wong(2007),Wang(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Altshuler(2010),Simon-Sanchez(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401818PC male "research_filter, clinical_filter" TGEC92715 12 117794323 118666319 871997 Gain 3 0.903126 1026 850 chas 92.45 Gain 99.26 Gain 99.63 Gain GainGainGain 718 NA NA NA "ChAS,IPN,NXS,PTK" "12q24.22,12q24.23" - "NOS1,PEBP1,RFC5,VSIG10,WSB2,KSR2,TAOK3" 7 "NOS1,PEBP1,RFC5,VSIG10,WSB2,KSR2,TAOK3" 7 - - - "41389(7|Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Shaikh(2009),Mills(2006))" "1143(3|Conrad(2009),Bentley(2008))" - 718 - 0 "351685(60|Teague(2010),Wong(2007),Conrad(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 4000046CJ female "research_filter, clinical_filter" HAAE15834 2 110498142 111365996 867855 Loss 1 0.929175 118 7417 chas 12.63 Loss 20.24 Loss 20.29 Loss LossLossLoss 96 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "595375(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 96 NPHP1#id_known 1 "830453(172|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" WMBQ46007 16 32937323 33801383 864061 Gain 3 0.887627 88 9931 chas 0 - 58.16 Gain 100 Gain #NAME? 130 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 - - 632318(1|Kidd(2008)) "864061(77|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 97 130 - 0 "864061(564|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401230NL female "research_filter, clinical_filter" TZAD89276 2 110504319 111365996 861678 Gain 4 0.952879 116 7492 chas 12.38 Gain 51.09 Gain 39.8 Gain GainGainGain 95 9.78 - BS "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 401185LE female "research_filter, clinical_filter" MTRE48443 2 110504319 111365996 861678 Gain 3 0.901558 116 7492 chas 12.38 Gain 28.47 Gain 30.91 Gain GainGainGain 95 0 - - "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400378HL female "research_filter, clinical_filter" OBWN97941 2 110504319 111365996 861678 Loss 1 0.905622 116 7492 chas 12.38 Loss 20.38 Loss 21.76 Loss LossLossLoss 95 0 - - "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400113LD female "research_filter, clinical_filter" WCXF39029 2 110504319 111365996 861678 Loss 1 0.93399 116 7492 chas 12.66 Loss 14.92 Loss 31.14 Loss LossLossLoss 95 21.12 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400788PV male "research_filter, clinical_filter" LHVX52107 2 110504319 111365996 861678 Gain 3 0.891534 116 7492 chas 9.17 Gain 32.95 Gain 51.82 Gain GainGainGain 95 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401341TS female "research_filter, clinical_filter" RBTV68848 2 110504319 111365996 861678 Loss 1 0.928784 116 7492 chas 12.72 Loss 27.93 Loss 34.78 Loss LossLossLoss 95 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" AVJL63299 2 110504319 111365996 861678 Gain 3 0.90697 116 7492 chas 12.72 Gain 28.47 Gain 31.06 Gain GainGainGain 95 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" LJOH21233 2 110504319 111365996 861678 Loss 1 0.917818 116 7492 chas 12.72 Loss 31.76 Loss 37.88 Loss LossLossLoss 95 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400829MR male "research_filter, clinical_filter" MQVK42355 2 110504319 111365996 861678 Gain 3 0.902797 116 7492 chas 8.23 Gain 35.32 Gain 40.5 Gain GainGainGain 95 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 "LINC00116,LIMS3-LOC440895,LOC100288570,LOC151009,NPHP1,LIMS3,MALL,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 13 NPHP1 - 142915(1|Kidd(2008)) "589198(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 86 95 NPHP1#id_known 1 "824276(170|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401203MP female "research_filter, clinical_filter" MTRE48443 10 46287822 47149246 861425 Loss 1 0.852511 235 3681 chas 21.21 Loss 0 - 0 - Loss-- 210 0 - - "ChAS,IPN" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "861425(66|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 210 - 0 "861425(345|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400378HL female "research_filter, clinical_filter" BSJX70163 10 46287822 47148814 860993 Gain 3 0.880524 234 3695 chas 0 - 22.19 Gain 34.65 Gain #NAME? 210 NA NA NA "ChAS,NXS,PTK" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "860993(66|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 210 - 0 "860993(343|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401406KF male "research_filter, clinical_filter" BOER26307 10 46287822 47147301 859480 Loss 1 0.86848 232 3720 chas 21.03 Loss 0 - 0 - Loss-- 208 0 - - "ChAS,IPN" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "859480(66|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 208 - 0 "859480(341|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400571WV female "research_filter, clinical_filter" WXKO33327 10 46287822 47147301 859480 Gain 3 0.87438 232 3720 chas 0 - 1.08 Gain 35.07 Gain #NAME? 208 NA NA NA "ChAS,NXS,PTK" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "859480(66|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 208 - 0 "859480(341|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400496BL female "research_filter, clinical_filter" VVDA27035 10 46292023 47149411 857389 Gain 3 0.881712 234 3679 chas 0 - 14.73 Gain 22.27 Gain #NAME? 210 0 - - "ChAS,NXS,PTK" 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 11 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,LOC728643,BMS1P5,PPYR1" 11 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "857389(66|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 210 - 0 "857389(345|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400377WJ male "research_filter, clinical_filter" SRJV59260 16 32038694 32893294 854601 Loss 1 0.90275 48 18183 chas 0 - 50.5 Loss 79.1 Loss #NAME? 146 92.53 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - 681286(1|Kidd(2008)) "854601(99|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "5350(14|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 87 146 - 0 "854601(528|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" UAVX81306 10 46287822 47142216 854395 Loss 1 0.854374 228 3763 chas 0 - 0 - 0 - --- 205 NA NA NA ChAS 10q11.22 50001(1|contig) "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 "LOC643650,GPRIN2,PTPN20B,PTPN20A,FAM35B,LOC728643,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "854395(65|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "3879(13|Ahn(2009),Perry(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 73 205 - 0 "854395(340|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400643LD male clinical_filter VZJA70154 16 32046522 32899412 852891 Gain 3 0.883663 51 17057 chas 0 - 0 - 0 - --- 145 0 Gain IP6 ChAS 16p11.2 - "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 "LOC729264,TP53TG3,SLC6A10P,TP53TG3B,LOC390705,LOC653550,HERC2P4" 7 - - 681286(1|Kidd(2008)) "852891(100|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "5350(14|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 87 145 - 0 "852891(539|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401427CB male clinical_filter WZBZ52169 15 22770422 23620154 849733 Gain 3 0.895866 800 1063 chas 37.2 Gain 39.33 Gain 97.95 Gain GainGainGain 310 76.12 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8IP,HERC2P2,CYFIP1,HERC2P7,NIPA2,NIPA1,LOC283683,WHAMMP3,LOC653061,GOLGA8E,TUBGCP5" 11 "GOLGA8IP,HERC2P2,CYFIP1,HERC2P7,NIPA2,NIPA1,LOC283683,WHAMMP3,LOC653061,GOLGA8E,TUBGCP5" 11 NIPA1 "743523#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "849733(80|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "4144(14|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 61 310 - 0 "849733(267|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401619BT female "research_filter, clinical_filter" PRED73338 4 156776562 157620746 844185 Gain 4 0.954025 661 1279 chas 98.45 Gain 99.23 Gain 99.23 Gain GainGainGain 661 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.1 - "TDO2,ACCN5,CTSO" 3 "TDO2,ACCN5,CTSO" 3 - - - "80612(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Altshuler(2010),McKernan(2009),Hinds(2005),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Shaikh(2009))" "3408(19|Ahn(2009),Conrad(2005),Perry(2008),Wang(2008),Levy(2007),Matsuzaki(2009),Pang(2010),Wheeler(2008),Shaikh(2009),Mills(2006))" - 661 TDO2#asd_candidate 1 "411712(104|Teague(2010),Wang(2008),Tuzun(2005),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Hinds(2006),Campbell(2011),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" XZOF13341 14 106044263 106876355 832093 Gain 3 0.880444 264 3163 chas 73.18 Gain 75.38 Gain 100 Gain GainGainGain 319 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - "ADAM6,LINC00226,KIAA0125" 3 "ADAM6,LINC00226,KIAA0125" 3 - - "132309(3|Kidd(2008),Ahn(2009))" "832093(249|Sebat(2004),Korbel(2007),Wang(2007),de Smith(2007),Bentley(2008),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Itsara(2009),Levy(2007),Park(2010))" "14256(40|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 57 319 - 0 "832093(1903|Sebat(2004),Korbel(2007),Wang(2007),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Teague(2010),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" FXTM73808 3 83533158 84361615 828458 Loss 1 0.927244 462 1797 chas 99.52 Loss 99.75 Loss 99.75 Loss LossLossLoss 401 NA NA NA "ChAS,IPN,NXS,PTK" 3p12.1 - - 0 - 0 - - - "53245(29|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Shaikh(2009))" "4447(12|Pang(2010),Park(2010),Levy(2007),Matsuzaki(2009))" 0 401 - 0 "585344(157|Teague(2010),Ahn(2009),Korbel(2007),Wang(2008),Conrad(2009),Kidd(2010b),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Wong(2007),Park(2010),Pinto(2011),Jakobsson(2008),Ju(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401030GI female "research_filter, clinical_filter" RYTQ14327 13 50580928 51404018 823091 Loss 1 0.859062 745 1106 chas 87.73 Loss 9.78 Loss 100 Loss LossLossLoss 563 98.36 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "13q14.3,13q14.2" - "TRIM13,DLEU7,MIR16-1,DLEU2,DLEU1,ST13P4,KCNRG,MIR15A" 8 "TRIM13,DLEU7,MIR16-1,DLEU2,DLEU1,ST13P4,KCNRG,MIR15A" 8 - - - "58535(26|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),Altshuler(2010),Park(2010),Wheeler(2008))" "1658(5|Matsuzaki(2009),Bentley(2008))" 0 563 - 0 "389526(163|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wong(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" CVRD94421 16 32038694 32851881 813188 Loss 1 0.914555 24 35356 chas 0 - 50.69 Loss 53.76 Loss #NAME? 137 86.7 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,TP53TG3B,LOC390705,LOC653550,HERC2P4" 6 "LOC729264,TP53TG3,TP53TG3B,LOC390705,LOC653550,HERC2P4" 6 - - 681286(1|Kidd(2008)) "813188(89|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "5350(14|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 86 137 - 0 "813188(490|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400586RD male research_filter YTCX24219 16 32038694 32848892 810199 Loss 1 0.917165 20 42642 chas 0 - 46.5 Loss 55.95 Loss #NAME? 135 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC729264,TP53TG3,TP53TG3B,LOC390705,LOC653550,HERC2P4" 6 "LOC729264,TP53TG3,TP53TG3B,LOC390705,LOC653550,HERC2P4" 6 - - 681286(1|Kidd(2008)) "810199(89|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "5350(14|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 86 133 - 0 "810199(490|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400502GS female research_filter ZDRZ89201 21 32372727 33179773 807047 Gain 3 0.902096 814 992 chas 97.35 Gain 100 Gain 100 Gain GainGainGain 566 NA NA NA "ChAS,IPN,NXS,PTK" 21q22.11 - "SCAF4,TIAM1,KRTAP19-8,SOD1" 4 "SCAF4,TIAM1,KRTAP19-8,SOD1" 4 SOD1 - - "137721(12|Conrad(2009),Ahn(2009),McKernan(2009),Matsuzaki(2009),de Smith(2007),Altshuler(2010),McCarroll(2008),Park(2010),Kim(2009))" "2930(6|de Smith(2007),Pang(2010),Levy(2007),Kim(2009),Ahn(2009))" 1 566 - 0 "467806(74|Conrad(2009),Ahn(2009),Wong(2007),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Campbell(2011),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401855RE male "research_filter, clinical_filter" CLWS25417 1 12910004 13709344 799341 Loss 1 0.888986 24 34753 chas 34.64 Loss 0.71 Loss 53.93 Loss LossLossLoss 55 5.03 Loss BS "ChAS,IPN,NXS,PTK" 1p36.21 "200003(3|clone,contig)" "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF10,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF2,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 19 "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF10,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF2,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 19 - - 15680(1|Kidd(2008)) "799341(129|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),McCarroll(2008),Tuzun(2005),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009))" "1535(4|Wheeler(2008),Matsuzaki(2009))" 73 55 - 0 "799341(488|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401661HD male research_filter WCXF39029 1 102043887 102837086 793200 Gain 3 0.89973 738 1076 chas 66.8 Gain 100 Gain 100 Gain GainGainGain 596 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "1p21.1,1p21.2" - "OLFM3,DNAJA1P5" 2 "OLFM3,DNAJA1P5" 2 - - - "462400(16|Redon(2006),Matsuzaki(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Shaikh(2009),Park(2010),Zogopoulos(2007),Simon-Sanchez(2007),McCarroll(2008))" "2997(9|McCarroll(2005),Wheeler(2008),Conrad(2005),Matsuzaki(2009))" 0 596 - 0 "739037(58|Teague(2010),Wong(2007),Redon(2006),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Pinto(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400788PV male "research_filter, clinical_filter" RXRT66436 18 33917296 34702237 784942 Loss 1 0.917053 990 793 chas 98.27 Loss 98.09 Loss 98.82 Loss LossLossLoss 656 NA NA NA "ChAS,IPN,NXS,PTK" 18q12.2 - "C18orf10,KIAA1328,FHOD3" 3 "C18orf10,KIAA1328,FHOD3" 3 - - - "421437(23|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Matsuzaki(2009),Pang(2010),Pinto(2007),McCarroll(2005),McCarroll(2008),Kim(2009),Mills(2006))" "2509(7|Park(2010),Levy(2007),Matsuzaki(2009))" - 656 - 0 "623508(57|Conrad(2009),Wong(2007),Redon(2006),Korbel(2007),Perry(2008),Wang(2007),Pinto(2011),Conrad(2006),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2007),Park(2010),McCarroll(2008),Kim(2009),McCarroll(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" GQXG36971 Y 26241300 27022375 781076 Loss 0 0.880881 256 3063 chas 94.03 Loss 0 - 0 - Loss-- 152 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CSPG4P1Y" 15 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,DAZ4,CSPG4P1Y" 15 - "781076#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "781076(23|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 151 - 0 "748458(16|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 401930GD male "research_filter, clinical_filter" NWRU68440 7 152868636 153648708 780073 Gain 3 0.903877 636 1228 chas 91.23 Gain 91.7 Gain 100 Gain GainGainGain 637 NA NA NA "ChAS,IPN,NXS,PTK" 7q36.2 - DPP6 1 DPP6 1 DPP6 - - "288887(29|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Itsara(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "4763(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008))" 15 637 DPP6#asd_candidate 1 "748674(128|Teague(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401064FR male "research_filter, clinical_filter" ELWV13238 X 93135096 93912256 777161 Gain 2 0.932554 420 1854 chas 98.57 Gain 0 - 0 - Gain-- 541 NA NA NA "ChAS,IPN" "Xq21.32,Xq21.33" - - 0 - 0 - - - "312401(7|McCarroll(2005),Conrad(2009),McCarroll(2008),Matsuzaki(2009),Shaikh(2009))" "2047(7|Matsuzaki(2009),Shaikh(2009))" 0 541 - 0 "474419(37|Conrad(2009),Teague(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Campbell(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401013GJ male "research_filter, clinical_filter" NUMT67226 X 88066495 88843243 776749 Loss 1 0.910566 358 2175 chas 97.87 Loss 0 - 0 - Loss-- 395 NA NA NA "ChAS,IPN" Xq21.31 - - 0 - 0 - - - "387523(9|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009))" "2174(7|Wang(2008),Levy(2007),Matsuzaki(2009),Bentley(2008))" 50 395 - 0 "705082(62|Teague(2010),Conrad(2009),Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Cooper(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401079HJ female "research_filter, clinical_filter" HQWW55061 16 32848891 33624461 775571 Loss 1 0.865465 94 8339 chas 4.31 Loss 0 - 0 - Loss-- 128 100 Loss "BS,GTC,IP6" "ChAS,IPN" 16p11.2 - "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 - - 625265(1|Kidd(2008)) "775571(82|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 97 128 - 0 "775571(551|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" LNDH30137 Y 4894674 5653460 758787 Gain 2 0.921629 468 1624 chas 100 Gain 0 - 0 - Gain-- 192 NA NA NA "ChAS,IPN" Yp11.2 - PCDH11Y 1 PCDH11Y 1 - - - - 361(1|Matsuzaki(2009)) 100 192 - 0 "8996(3|Teague(2010),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401808PS male "research_filter, clinical_filter" RYUR49963 10 46287822 47041827 754006 Loss 1 0.854617 92 8285 chas 0 - 0 - 0 - --- 95 0 - - ChAS 10q11.22 50001(1|contig) "GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5" 9 "GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5" 9 - - "31509(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "754006(62|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" 1688(3|Perry(2008)) 83 95 - 0 "754006(269|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no affy6_no 400177SJ male clinical_filter BWCN37814 5 27763102 28515495 752394 Loss 1 0.927767 458 1646 chas 98.91 Loss 99.38 Loss 99.38 Loss LossLossLoss 452 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.1 - - 0 - 0 - - - "69276(19|Conrad(2009),Matsuzaki(2009),Ju(2010),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Kim(2009))" "515(4|Wang(2008),Levy(2007),Ahn(2009),Mills(2006))" - 452 - 0 "752394(157|Teague(2010),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Kidd(2008),McCarroll(2008),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401966SR male "research_filter, clinical_filter" HAAE15834 11 50477716 51228168 750453 Loss 1 0.87375 55 13897 chas 8.6 Loss 2.58 Loss 0 - LossLoss- 62 NA NA NA "ChAS,IPN,NXS" 11p11.12 "307001(3|clone,heterochromatin)" - 0 - 0 - - - "750453(15|Wang(2007),Ahn(2009),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),Pinto(2007),Shaikh(2009))" "465(3|Wang(2008),Levy(2007))" - 62 - 0 "750453(304|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Wang(2007),Itsara(2009),Wang(2008),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" EHLK43437 14 106132755 106876355 743601 Loss 1 0.901614 248 3010 chas 100 Loss 82.55 Loss 95.94 Loss LossLossLoss 301 95.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - "ADAM6,LINC00226,KIAA0125" 3 "ADAM6,LINC00226,KIAA0125" 3 - - "126470(3|Kidd(2008),Ahn(2009))" "743601(234|Sebat(2004),Korbel(2007),Wang(2007),de Smith(2007),Bentley(2008),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Itsara(2009),Levy(2007),Park(2010))" "11708(30|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 52 301 - 0 "743601(1763|Sebat(2004),Korbel(2007),Wang(2007),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Teague(2010),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401192MJ male "research_filter, clinical_filter" VSHC86133 8 43048002 43786723 738722 Gain 3 0.896327 456 1623 chas 98.67 Gain 97.63 Gain 99.38 Gain GainGainGain 205 NA NA NA "ChAS,IPN,NXS,PTK" "8p11.21,8p11.1" - "HGSNAT,POTEA" 2 "HGSNAT,POTEA" 2 HGSNAT - 1756(1|Ahn(2009)) "738722(22|Conrad(2009),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Itsara(2009),Pinto(2007),Wheeler(2008),Kim(2009),Shaikh(2009))" "3223(15|Wang(2008),Levy(2007),Ahn(2009),Wheeler(2008),Bentley(2008))" 4 205 - 0 "738722(119|Teague(2010),Ahn(2009),Wong(2007),Jakobsson(2008),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400347VJ male "research_filter, clinical_filter" RPWI18802 4 35671613 36408967 737355 Loss 1 0.930037 640 1153 chas 99.44 Loss 99.72 Loss 99.99 Loss LossLossLoss 526 NA NA NA "ChAS,IPN,NXS,PTK" "4p14,4p15.1" - "DTHD1,ARAP2" 2 "DTHD1,ARAP2" 2 - - - "52246(15|Conrad(2009),McKernan(2009),McCarroll(2008),Matsuzaki(2009))" "3309(19|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009))" - 526 - 0 "463773(58|Conrad(2009),Wong(2007),Jakobsson(2008),Banerjee(2011),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Teague(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" WXKO33327 15 39470708 40204221 733514 Gain 3 0.901003 789 930 chas 96 Gain 99.96 Gain 100 "Gain,Loss" "GainGainGain,Loss" 577 NA NA NA "ChAS,IPN,NXS,PTK" "15q14,15q15.1" - "GPR176,C15orf54,FSIP1,THBS1" 4 "GPR176,C15orf54,FSIP1,THBS1" 4 - - - "16605(7|Conrad(2009),Ahn(2009),Matsuzaki(2009),McKernan(2009),McCarroll(2008),Wheeler(2008))" "3039(24|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Kim(2009),Mills(2006))" - 577 - 0 "428856(80|Conrad(2009),Ahn(2009),Wong(2007),Teague(2010),Kidd(2008),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Pinto(2011),Kim(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400496BL female "research_filter, clinical_filter" UJRA83281 11 50472473 51205141 732669 Loss 1 0.8729 48 15588 chas 0 - 0 - 0 - --- 53 NA NA NA ChAS 11p11.12 "307001(3|clone,heterochromatin)" - 0 - 0 - - - "732669(13|Wang(2007),Ahn(2009),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),Pinto(2007),Shaikh(2009))" 2(2|Levy(2007)) - 53 - 0 "732669(301|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Wang(2007),Itsara(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401361GG male clinical_filter CAYM40684 10 46287822 47015529 727708 Loss 1 0.859165 68 10861 chas 6.73 Loss 0 - 0 - Loss-- 84 NA NA NA "ChAS,IPN" 10q11.22 50001(1|contig) "GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5" 9 "GPRIN2,PTPN20B,PTPN20A,FAM35B,AGAP4,SYT15,BMS1P1,FAM21C,BMS1P5" 9 - - 5211(1|Pang(2010)) "727708(62|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Matsuzaki(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" 1688(3|Perry(2008)) 86 84 - 0 "727708(255|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Wang(2007),Sebat(2004),Park(2010),Pinto(2011),Jakobsson(2008),Schuster(2010),Ju(2010),Korbel(2007),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" PTGD86385 8 40921564 41648358 726795 Gain 3 0.897422 612 1189 chas 91.46 Gain 99.1 Gain 99.88 Gain GainGainGain 484 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.21 - "SFRP1,GINS4,ANK1,AGPAT6,MIR486,GOLGA7,NKX6-3" 7 "SFRP1,GINS4,ANK1,AGPAT6,MIR486,GOLGA7,NKX6-3" 7 ANK1 - - "114928(5|de Smith(2007),Park(2010),McKernan(2009),Matsuzaki(2009))" "3722(15|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),McCarroll(2005),Wheeler(2008),Mills(2006))" 0 484 - 0 "404029(56|Ahn(2009),Wong(2007),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),De(Smith_2007),Pang(2010),Park(2010),Wilson(2010),Pinto(2011),Bentley(2008),McCarroll(2006),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" KGYY91251 10 46966534 47692945 726412 Gain 3 0.881487 250 2917 chas 14.31 Gain 52.08 Gain 100 Gain GainGainGain 362 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "726412(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 58 362 - 0 "726412(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401348RB male "research_filter, clinical_filter" ZIPB72793 10 46966534 47692945 726412 Gain 3 0.883091 250 2917 chas 0 - 38.42 Gain 100 Gain #NAME? 362 12.09 Gain IP6 "ChAS,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "726412(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 58 362 - 0 "726412(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401889FR male "research_filter, clinical_filter" QAGW25123 10 46966534 47688677 722144 Gain 3 0.893839 248 2923 chas 28.18 Gain 82.45 Gain 100 Gain GainGainGain 359 20.3 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "722144(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 359 - 0 "722144(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" GZBA26596 10 46966534 47688677 722144 Gain 3 0.894034 248 2923 chas 28.18 Gain 37.2 Gain 100 Gain GainGainGain 359 20.3 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "722144(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 359 - 0 "722144(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400150SS female "research_filter, clinical_filter" IENJ56420 10 46966534 47688677 722144 Gain 3 0.883607 248 2923 chas 13.81 Gain 52.16 Gain 100 Gain GainGainGain 359 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "722144(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 359 - 0 "722144(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401538NS female "research_filter, clinical_filter" VHVH83554 10 46966534 47688677 722144 Gain 3 0.880198 248 2923 chas 0 - 71.98 Gain 100 Gain #NAME? 359 20.3 Gain "BS,IP6" "ChAS,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "722144(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 359 - 0 "722144(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" SNEF27582 10 46966534 47688275 721742 Gain 3 0.899722 247 2933 chas 2.85 Gain 79.87 Gain 100 Gain GainGainGain 359 17.28 Gain IP6 "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "721742(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 358 - 0 "721742(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" ZKCL87954 10 46966534 47688275 721742 Gain 3 0.884072 247 2933 chas 13.76 Gain 77.61 Gain 100 Gain GainGainGain 359 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 "ANTXRL,LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,SYT15,FAM25C,LOC728643,FAM25G,PPYR1" 14 - - "96931(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "721742(99|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 59 358 - 0 "721742(585|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" KLEB18411 16 32893631 33608648 715018 Loss 1 0.85747 61 11916 chas 2.47 Loss 0 - 0 - Loss-- 107 51.94 Loss "BS,GTC,IP6" "ChAS,IPN" 16p11.2 - "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 - - 609452(1|Kidd(2008)) "715018(74|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5267(14|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 98 107 - 0 "715018(511|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" GNMX63810 15 45659188 46372824 713637 Gain 3 0.906212 612 1167 chas 99.35 Gain 99.36 Gain 99.68 Gain GainGainGain 434 NA NA NA "ChAS,IPN,NXS,PTK" 15q21.1 - "SQRDL,GATM,HMGN2P46,C15orf48,SPATA5L1,SLC30A4,LOC145663,PLDN,MIR147B" 9 "SQRDL,GATM,HMGN2P46,C15orf48,SPATA5L1,SLC30A4,LOC145663,PLDN,MIR147B" 9 "GATM,PLDN" - - "43550(11|Conrad(2009),Matsuzaki(2009),McKernan(2009),Bentley(2008),Pang(2010),McCarroll(2008))" "2221(14|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 0 434 - 0 "449359(88|Banerjee(2011),Ahn(2009),Itsara(2009),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Locke(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" ORXH15927 16 32893294 33602531 709238 Loss 1 0.858663 53 13639 chas 1.63 Loss 0 - 0 - Loss-- 102 42.53 Loss "BS,GTC,IP6" "ChAS,IPN" 16p11.2 - "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 "TP53TG3B,LOC653550,SLC6A10P,TP53TG3,LOC390705" 5 - - 603335(1|Kidd(2008)) "709238(74|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "4928(13|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 99 102 - 0 "709238(504|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" FPEA56091 16 32916556 33625438 708883 Loss 1 0.86691 30 24444 chas 4.05 Loss 0 - 0 - Loss-- 105 100 Loss "BS,GTC,IP6" "ChAS,IPN" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 - - 626242(1|Kidd(2008)) "708883(71|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 96 105 - 0 "708883(495|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" KIIK22313 2 32628618 33334699 706082 Gain 3 0.909836 775 912 chas 76.58 Gain 99.9 Gain 99.71 Gain GainGainGain 458 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 - - - "706082(27|Itsara(2009),Ahn(2009),Korbel(2007),Ju(2010),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Kim(2009),Simon-Sanchez(2007))" 831(1|Matsuzaki(2009)) - 458 - 0 "706082(136|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401496SL male "research_filter, clinical_filter" AEUU95723 8 32646766 33352735 705970 Gain 3 0.900998 490 1443 chas 98.5 Gain 100 Gain 100 Gain GainGainGain 449 NA NA NA "ChAS,IPN,NXS,PTK" 8p12 - "FUT10,MAK16" 2 "FUT10,MAK16" 2 - - - "78246(27|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),McKernan(2009),Shaikh(2009),Mills(2006))" "1196(3|Conrad(2009),Matsuzaki(2009))" 0 449 - 0 "211561(179|Ju(2010),Korbel(2007),Teague(2010),Wang(2008),Tuzun(2005),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402073LQ male "research_filter, clinical_filter" WBPB92916 2 32630535 33334307 703773 Gain 3 0.900326 768 917 chas 98.66 Gain 99.8 Gain 99.26 Gain GainGainGain 456 98.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p22.3 - "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 - - - "703773(27|Itsara(2009),Ahn(2009),Korbel(2007),Ju(2010),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Kim(2009),Simon-Sanchez(2007))" 831(1|Matsuzaki(2009)) - 456 - 0 "703773(136|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401210PB male "research_filter, clinical_filter" NKNM36178 2 32630535 33332116 701582 Gain 3 0.902546 766 917 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 453 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 - - - "701582(27|Itsara(2009),Ahn(2009),Korbel(2007),Ju(2010),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Kim(2009),Simon-Sanchez(2007))" 831(1|Matsuzaki(2009)) - 453 - 0 "701582(136|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400668TD male "research_filter, clinical_filter" JXQB25794 2 32633671 33334307 700637 Gain 3 0.907107 766 915 chas 99.1 Gain 98.93 Gain 98.93 Gain GainGainGain 455 99.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p22.3 - "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 "LINC00486,LTBP1,BIRC6,MIR4765,MIR558,LOC100271832,TTC27" 7 - - - "700637(27|Itsara(2009),Ahn(2009),Korbel(2007),Ju(2010),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Kim(2009),Simon-Sanchez(2007))" 831(1|Matsuzaki(2009)) - 455 - 0 "700637(136|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" WUMM65746 2 14038419 14738065 699647 Loss 1 0.927974 475 1476 chas 99.51 Loss 99.17 Loss 99.17 Loss LossLossLoss 572 99.2 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p24.3 - - 0 - 0 - - - "232452(24|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Cooper(2008),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "2313(6|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Pang(2010))" - 572 - 0 "500032(86|Teague(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" VLMR80827 16 32937323 33625438 688116 Loss 1 0.87716 22 32767 chas 4.83 Loss 0 - 0 - Loss-- 105 13.54 Loss IP6 "ChAS,IPN" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 "LOC653550,TP53TG3B,TP53TG3,LOC390705" 4 - - 626242(1|Kidd(2008)) "688116(71|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),McCarroll(2008))" "5500(15|Ahn(2009),Perry(2008),Matsuzaki(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 96 105 - 0 "688116(489|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401630MK female research_filter FCXX78522 X 93734549 94422649 688101 Loss 0 0.961703 340 2029 chas 99.16 Loss 0 - 0 - Loss-- 392 99.2 Loss "BS,GTC,IP6" "ChAS,IPN" Xq21.33 - - 0 - 0 - - - 232075(3|Shaikh(2009)) - - 391 - 0 "652941(21|Kidd(2008),Durbin(2010),Shaikh(2009),Teague(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" BYSK29073 Y 24993197 25673133 679937 Gain 2 0.847821 265 2575 chas 4.57 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Yq11.223 - "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 DAZ1 "679937#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "679937(15|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 58 - 0 "679937(13|Teague(2010),McCarroll(2008),Perry(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" NWRU68440 15 25621880 26296396 674517 Gain 4 0.939565 1248 540 chas 97.76 Gain 98.86 Gain 98.31 Gain GainGainGain 592 NA NA NA "ChAS,IPN,NXS,PTK" "15q11.2,15q12" - "ATP10A,MIR4715,UBE3A,LOC100128714" 4 "ATP10A,MIR4715,UBE3A,LOC100128714" 4 UBE3A "674517#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "322322(22|Ju(2010),Ahn(2009),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),Gusev(2009),Park(2010),Kim(2009),Shaikh(2009))" "3437(20|Conrad(2009),Perry(2008),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010))" 1 592 UBE3A#asd_known 1 "407502(78|Teague(2010),Ahn(2009),Wong(2007),Gusev(2009),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Conrad(2009),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401064FR male "research_filter, clinical_filter" MECH38806 11 54701632 55373995 672364 Gain 3 0.885856 616 1093 chas 68.65 Gain 74.48 Gain 99.21 Gain GainGainGain 248 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4A16,OR4A15,TRIM48,OR4C15,OR4C16,OR4C11,LOC440041" 7 "OR4A16,OR4A15,TRIM48,OR4C15,OR4C16,OR4C11,LOC440041" 7 - - 9759(1|Korbel(2007)) "672364(62|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Young(2008),Kidd(2008),Altshuler(2010),McCarroll(2005),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Gusev(2009),McCarroll(2008),Park(2010),Ju(2010))" "3206(7|Young(2008),Levy(2007),Ahn(2009),Perry(2008))" 10 248 - 0 "672364(796|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Tuzun(2005),Pang(2010),Shaikh(2009),Wang(2007),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" PAGW82790 10 47020281 47688677 668397 Gain 3 0.872395 180 3734 chas 22.4 Gain 21.93 Gain 0 - GainGain- 313 4.71 Gain IP6 "ChAS,IPN,NXS" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 - - "86969(9|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "668397(97|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 63 313 - 0 "668397(565|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" DOIH36842 X 6455152 7120567 665416 Gain 2 0.94647 2448 271 chas 99.66 Gain 0 - 0 - Gain-- 499 NA NA NA "ChAS,IPN" Xp22.31 - "HDHD1,MIR4767" 2 "HDHD1,MIR4767" 2 - "665416#1%""Steroid sulphatase deficiency (STS)"":1725741" - "464802(19|Wang(2007),Redon(2006),Conrad(2005),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1042(5|Levy(2007),Matsuzaki(2009),Bentley(2008))" 7 499 - 0 "425639(28|Teague(2010),Redon(2006),Wang(2007),Levy(2007),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" USUN51593 3 175078506 175740167 661662 Loss 1 0.922412 616 1075 chas 99.68 Loss 99.67 Loss 99.84 Loss LossLossLoss 427 99.68 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "3q26.31,3q26.32" - "NAALADL2,MIR4789" 2 "MIR4789,NAALADL2" 2 - - - "641360(15|Wang(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),McKernan(2009),Matsuzaki(2009),Kidd(2008),Conrad(2009),Park(2010),McCarroll(2005),Shaikh(2009))" "564(2|Conrad(2009),Matsuzaki(2009))" 1 427 - 0 "661662(98|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2010),Kidd(2008),Gusev(2009),Park(2010),Pinto(2011),McKernan(2009),Bentley(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" UHIX56739 9 68342786 69002883 660098 Loss 1 0.887725 16 44006 chas 0 - 0 - 0 - --- 52 0 - - ChAS "9q21.11,9q13" 300002(2|contig) "LOC100132352,LOC642236" 2 "LOC100132352,LOC642236" 2 - - "74750(4|Ahn(2009),Korbel(2007))" "660098(29|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008))" "2682(10|Pang(2010),Ahn(2009),McKernan(2009))" 52 52 - 0 "660098(252|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sharp(2005),McKernan(2009),Durbin(2010),Pang(2010),Locke(2006),Wong(2007),Campbell(2011),Perry(2008b),Pinto(2011),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 401040KM female - GQXG36971 Y 27040718 27698929 658212 Loss 0 0.866688 248 2664 chas 100 Loss 0 - 0 - Loss-- 111 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CSPG4P1Y" 15 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C,GOLGA2P2Y,GOLGA2P3Y,CSPG4P1Y" 15 - "658212#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "658212(16|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 111 - 0 "658212(22|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 401930GD male "research_filter, clinical_filter" NTSS59900 13 65769502 66421816 652315 Gain 3 0.902865 460 1421 chas 100 Gain 100 Gain 100 Gain GainGainGain 389 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q21.32 - - 0 - 0 - - - "652315(10|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" "1918(3|Park(2010),Ahn(2009),McKernan(2009))" 0 389 - 0 "652315(45|Sebat(2004),Ahn(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Pinto(2007),Durbin(2010),Kidd(2008),McCarroll(2008),Park(2010),Redon(2006),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" HXWA61262 9 31351302 32000451 649150 Gain 3 0.898128 428 1520 chas 69.97 Gain 96.92 Gain 99.86 Gain GainGainGain 455 98.68 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - "21626(5|McKernan(2009),Matsuzaki(2009),Shaikh(2009))" 391(1|Matsuzaki(2009)) - 455 - 0 "333532(26|Itsara(2009),Teague(2010),McKernan(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401438HT male "research_filter, clinical_filter" MLUO94199 5 56679092 57326014 646923 Gain 3 0.901425 476 1361 chas 87.81 Gain 99.66 Gain 99.66 Gain GainGainGain 486 99.32 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q11.2 - ACTBL2 1 ACTBL2 1 - - - "41532(23|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Park(2010))" 620(1|McKernan(2009)) - 486 - 0 "560898(111|Teague(2010),Ahn(2009),Wong(2007),Perry(2008),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Kidd(2010b),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" WMOD47474 Y 26592404 27224389 631986 Gain 2 0.86514 76 8426 chas 0 - 0 - 0 - --- 85 NA NA NA ChAS Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "631986#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "631986(16|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 85 - 0 "631986(16|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_no algo_no NA 401489CB male clinical_filter YPPO84595 14 63206703 63838484 631782 Gain 3 0.907693 748 845 chas 99.42 Gain 99.66 Gain 99.66 Gain GainGainGain 448 NA NA NA "ChAS,IPN,NXS,PTK" 14q23.2 - "KCNH5,RHOJ,GPHB5" 3 "KCNH5,RHOJ,GPHB5" 3 - - - "91603(9|Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Park(2010),Shaikh(2009))" "3230(10|Conrad(2009),Ahn(2009),Levy(2007),Bentley(2008),Park(2010),Mills(2006))" 0 448 - 0 "463872(71|Teague(2010),Ahn(2009),Wong(2007),Conrad(2009),Itsara(2009),Banerjee(2011),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" VBEF49630 10 47062985 47692945 629961 Gain 3 0.893039 130 4883 chas 16.51 Gain 51.73 Gain 100 Gain GainGainGain 277 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 - - "44265(3|Ahn(2009),McKernan(2009),Tuzun(2005))" "629961(97|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 67 277 - 0 "629961(537|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" IAMC34091 10 46971945 47600476 628532 Gain 3 0.882065 236 2674 chas 1.83 Gain 35.28 Gain 100 Gain GainGainGain 222 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 12 "LOC642826,LOC643650,GPRIN2,ANXA8,FAM35B2,ANXA8L1,AGAP9,FAM25B,FAM25C,LOC728643,FAM25G,PPYR1" 12 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "628532(77|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Gusev(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2568(12|Ahn(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 55 222 - 0 "628532(515|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402067KS female "research_filter, clinical_filter" VUND65965 11 14372513 14998193 625681 Gain 3 0.895313 582 1076 chas 88.81 Gain 99.13 Gain 99.13 Gain GainGainGain 273 NA NA NA "ChAS,IPN,NXS,PTK" 11p15.2 - "RRAS2,PDE3B,PSMA1,COPB1,CALCA,CYP2R1" 6 "RRAS2,PDE3B,PSMA1,COPB1,CALCA,CYP2R1" 6 "RRAS2,CYP2R1" - - "37076(2|de Smith(2007),Levy(2007))" 978(1|Conrad(2009)) 0 273 - 0 "345689(17|Conrad(2009),Wong(2007),Durbin(2010),Kidd(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" TAVH54072 10 2207097 2831710 624614 Gain 3 0.892305 604 1035 chas 89.74 Gain 99.64 Gain 99.84 Gain GainGainGain 624 NA NA NA "ChAS,IPN,NXS,PTK" 10p15.3 - LOC399708 1 LOC399708 1 - - - "180486(28|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Redon(2006),Shaikh(2009))" "4866(32|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 0 624 - 0 "519164(133|Banerjee(2011),Wong(2007),Redon(2006),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Conrad(2006),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Perry(2008b),Park(2010),Jakobsson(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400948EV female "research_filter, clinical_filter" RIQO94770 8 112539345 113160641 621297 Loss 1 0.910294 344 1811 chas 99.05 Loss 99.09 Loss 99.58 Loss LossLossLoss 326 NA NA NA "ChAS,IPN,NXS,PTK" 8q23.3 - - 0 - 0 - - - "41165(12|Park(2010),Kidd(2008),Korbel(2007),Matsuzaki(2009),Conrad(2009))" "3231(12|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Hinds(2005),Bentley(2008),Wheeler(2008),Mills(2006))" - 326 - 0 "413346(101|Conrad(2009),Ahn(2009),Wong(2007),Wang(2008),Pinto(2011),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Hinds(2006),Kidd(2008),Korbel(2007),Campbell(2011),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402062KR female "research_filter, clinical_filter" MLUO94199 X 7514751 8135644 620894 Gain 2 0.935244 1040 597 chas 96.67 Gain 0 - 0 - Gain-- 484 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 50001(1|clone) "VCX,MIR651,PNPLA4" 3 "VCX,MIR651,PNPLA4" 3 - "620894#1%""Steroid sulphatase deficiency (STS)"":1725741" - "620894(22|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "467(3|de Smith(2007),Bentley(2008),Mills(2006))" 9 484 - 0 "620894(36|Wang(2007),Redon(2006),Conrad(2009),Durbin(2010),De(Smith_2007),Kidd(2008),Shaikh(2009),Jakobsson(2008),Bentley(2008),Teague(2010),McCarroll(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" RWTQ90156 10 47078813 47692945 614133 Gain 3 0.868564 114 5434 chas 0 - 19.33 Gain 0 - -Gain- 262 24.56 Gain "BS,IP6" "ChAS,NXS" 10q11.22 100001(1|contig) "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 "ANTXRL,LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,PPYR1" 12 - - "43977(2|Ahn(2009),McKernan(2009))" "614133(97|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "3478(21|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 69 262 - 0 "614133(526|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" DZVA59681 Y 24804873 25415621 610749 Gain 2 0.872241 116 5310 chas 24.08 Gain 0 - 0 - Gain-- 36 NA NA NA "ChAS,IPN" Yq11.223 - "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 DAZ1 "610749#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "495880(17|Matsuzaki(2009),Perry(2008))" - 100 36 - 0 "610749(8|Teague(2010),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" ZSEZ81141 10 38291248 38900673 609426 Gain 3 0.892238 416 1468 chas 82.23 Gain 60.98 Gain 62.23 Gain GainGainGain 216 52.14 - BS "ChAS,IPN,NXS,PTK" 10p11.1 50001(1|clone) "LOC100129055,ZNF33A,HSD17B7P2,SEPT7L,ZNF37A,LOC399744" 6 "LOC100129055,ZNF33A,HSD17B7P2,SEPT7L,ZNF37A,LOC399744" 6 - - - "353032(21|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010))" "1779(3|Levy(2007),Ahn(2009))" 78 216 - 0 "406389(61|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400240HJ female "research_filter, clinical_filter" ZIPB72793 22 49396259 50003999 607741 Gain 3 0.902049 440 1384 chas 86.31 Gain 99.88 Gain 99.88 Gain GainGainGain 652 99.76 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q13.32,22q13.33" - - 0 - 0 - - - "139374(28|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009))" "8383(35|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Shaikh(2009),Mills(2006))" 0 652 - 0 "440274(209|Teague(2010),Redon(2006),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Banerjee(2011),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401889FR male "research_filter, clinical_filter" HGCG44121 X 4031988 4638740 606753 Gain 2 0.934751 396 1536 chas 98.98 Gain 0 - 0 - Gain-- 559 98.96 Gain "BS,GTC,IP6" "ChAS,IPN" "Xp22.32,Xp22.33" - - 0 - 0 - - - "606753(14|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Park(2010),McCarroll(2005),Shaikh(2009))" "1173(13|Levy(2007),McKernan(2009),Matsuzaki(2009))" - 559 - 0 "606753(68|Conrad(2009),Redon(2006),Wang(2007),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" WFGA96432 8 15649603 16253562 603960 Gain 3 0.902643 600 1008 chas 100 Gain 100 Gain 100 Gain GainGainGain 593 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "290981(42|Korbel(2007),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "1238(5|Park(2010),Levy(2007),McCarroll(2008),Conrad(2005),Mills(2006))" 0 593 - 0 "590236(154|Korbel(2007),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401493HC male "research_filter, clinical_filter" DDLZ80520 17 44187492 44789621 602130 Gain 3 0.905408 116 5235 chas 11.8 Gain 31.25 Gain 31.85 Gain GainGainGain 181 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "602130(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 181 - 0 "602130(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401892MJ female "research_filter, clinical_filter" MGJJ89085 17 44187492 44785669 598178 Gain 3 0.893993 112 5388 chas 4.1 Gain 29.2 Gain 29.2 Gain GainGainGain 178 29.54 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "598178(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 178 - 0 "598178(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" YDIQ26421 17 44187492 44785669 598178 Gain 3 0.883557 112 5388 chas 4.2 Gain 27.71 Gain 29.2 Gain GainGainGain 178 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "598178(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 178 - 0 "598178(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401591BE female "research_filter, clinical_filter" TGEC92715 17 44187492 44785669 598178 Gain 3 0.895651 112 5388 chas 4.03 Gain 26.31 Gain 77.83 Gain GainGainGain 178 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "598178(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 178 - 0 "598178(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 4000046CJ female "research_filter, clinical_filter" XTPE89033 4 187853428 188451488 598061 Loss 1 0.923919 388 1545 chas 99.99 Loss 99.85 Loss 100 Loss LossLossLoss 433 99.6 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q35.2 - LOC339975 1 LOC339975 1 - - - "525081(31|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),McCarroll(2008),Tuzun(2005),Park(2010),Zogopoulos(2007),Mills(2006))" "1897(7|Conrad(2009),Levy(2007),McKernan(2009),Mills(2006))" 2 433 - 0 "598061(101|Teague(2010),Korbel(2007),Perry(2008),Ju(2010),Levy(2007),Campbell(2011),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Tuzun(2005),Pinto(2011),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" YSDD20509 X 94444200 95042185 597986 Gain 3 0.900439 268 2239 chas 96.84 Gain 0 - 0 - Gain-- 295 NA NA NA "ChAS,IPN" Xq21.33 - - 0 - 0 - - - "27982(7|Kidd(2008),McKernan(2009),Matsuzaki(2009),Conrad(2009))" - 0 295 - 0 "474554(31|Conrad(2009),Jakobsson(2008),McKernan(2009),Durbin(2010),Kidd(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" ZQFY18932 6 167608002 168205775 597774 Gain 3 0.901509 321 1868 chas 98.12 Gain 99.84 Gain 100 Gain GainGainGain 229 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 100001(1|clone) "TTLL2,C6orf123,TCP10,UNC93A" 4 "TTLL2,C6orf123,TCP10,UNC93A" 4 - - "181654(3|Kidd(2008),Ahn(2009),McKernan(2009))" "597774(26|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Kim(2009),Shaikh(2009))" "6199(24|Conrad(2009),Ahn(2009),Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Shaikh(2009),Mills(2006))" 7 229 - 0 "597774(131|Teague(2010),Redon(2006),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" VAOW46427 17 44187492 44784970 597479 Gain 3 0.890825 110 5481 chas 10.4 Gain 31.95 Gain 32.1 Gain GainGainGain 178 29.58 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597479(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597479(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" KLEB18411 17 44187492 44784970 597479 Gain 3 0.89225 110 5481 chas 11.89 Gain 18.9 Gain 0 - GainGain- 178 29.58 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597479(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597479(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" VKJV88264 17 44187492 44784970 597479 Gain 3 0.917901 110 5481 chas 11.01 Gain 18.9 Gain 29.55 Gain GainGainGain 178 89.48 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597479(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597479(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" YBSU20689 17 44187492 44784970 597479 Gain 3 0.905363 110 5481 chas 4.04 Gain 4.21 Gain 29.42 Gain GainGainGain 178 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597479(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597479(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" GYBK42448 17 44187492 44784969 597478 Gain 3 0.900062 109 5532 chas 11.89 Gain 25 Gain 0 - GainGain- 177 64.29 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597478(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597478(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401277RA female "research_filter, clinical_filter" MOBN67062 17 44187492 44784969 597478 Gain 3 0.895276 109 5532 chas 4.11 Gain 15.06 Gain 29.28 Gain GainGainGain 177 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597478(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 177 - 0 "597478(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400569WC female "research_filter, clinical_filter" FOMC40154 17 44187492 44784639 597148 Gain 3 0.887501 108 5580 chas 11.02 Gain 34.65 Gain 34.65 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" IPKK73915 17 44187492 44784639 597148 Gain 3 0.896283 108 5580 chas 9.12 Gain 29.25 Gain 18.91 Gain GainGainGain 175 29.59 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" FPHR45460 17 44187492 44784639 597148 Gain 3 0.895146 108 5580 chas 11.78 Gain 26.19 Gain 26.58 Gain GainGainGain 175 29.59 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" WYBU35088 17 44187492 44784639 597148 Gain 3 0.883924 108 5580 chas 11.9 Gain 30.97 Gain 0 - GainGain- 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400579HJ female "research_filter, clinical_filter" ZPIM60940 17 44187492 44784639 597148 Gain 3 0.909658 108 5580 chas 11.9 Gain 26.39 Gain 29.43 Gain GainGainGain 175 88.41 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" ALWU32623 17 44187492 44784639 597148 Gain 3 0.902246 108 5580 chas 4.11 Gain 26.4 Gain 34.65 Gain GainGainGain 175 88.41 "Gain,Loss" "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400595CP female "research_filter, clinical_filter" TOAX48712 17 44187492 44784639 597148 Gain 3 0.881115 108 5580 chas 4.53 Gain 25.88 Gain 0 - GainGain- 175 34.65 Gain "BS,GTC" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" QMCQ87044 17 44187492 44784639 597148 Gain 3 0.879002 108 5580 chas 6.32 Gain 18.91 Gain 18.91 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400152MR male "research_filter, clinical_filter" SKLJ58672 17 44187492 44784639 597148 Gain 3 0.880174 108 5580 chas 15.29 Gain 27.68 Gain 0 - GainGain- 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" BMGG13461 17 44187492 44784639 597148 Gain 3 0.910456 108 5580 chas 11.9 Gain 26.83 Gain 29.57 Gain GainGainGain 175 93.47 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400002HK female "research_filter, clinical_filter" ILTL12466 17 44187492 44784639 597148 Gain 3 0.892653 108 5580 chas 10.41 Gain 29.25 Gain 29.25 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" HBQS50118 17 44187492 44784639 597148 Gain 3 0.891764 108 5580 chas 15.29 Gain 23.22 Gain 0 - GainGain- 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400205SP_1 male "research_filter, clinical_filter" YYJA27879 17 44187492 44784639 597148 Gain 3 0.912772 108 5580 chas 11.9 Gain 26.4 Gain 29.57 Gain GainGainGain 175 96.71 "Gain,-,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401074CM_1 female "research_filter, clinical_filter" USUN51593 17 44187492 44784639 597148 Gain 3 0.896647 108 5580 chas 15.29 Gain 29.25 Gain 0 - GainGain- 175 43.2 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" ZRZC68152 17 44187492 44784639 597148 Gain 3 0.890324 108 5580 chas 10.41 Gain 27.7 Gain 0 - GainGain- 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400155CW male "research_filter, clinical_filter" RKMW41925 17 44187492 44784639 597148 Gain 3 0.906022 108 5580 chas 4.11 Gain 26.35 Gain 29.57 Gain GainGainGain 175 91.66 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400323AA female "research_filter, clinical_filter" PTWY73614 17 44187492 44784639 597148 Gain 3 0.898452 108 5580 chas 10.41 Gain 11.27 Gain 29.43 Gain GainGainGain 175 88.41 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401540GM male "research_filter, clinical_filter" QMSH77829 17 44187492 44784639 597148 Gain 3 0.895479 108 5580 chas 15.29 Gain 31.57 Gain 0 - GainGain- 175 64.33 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400038CK male "research_filter, clinical_filter" PQCI84759 17 44187492 44784639 597148 Gain 3 0.895549 108 5580 chas 11.9 Gain 32.33 Gain 32.12 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" GNXG93257 17 44187492 44784639 597148 Gain 3 0.902104 108 5580 chas 11.43 Gain 27.54 Gain 32.12 Gain GainGainGain 175 64.33 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" AYKK27829 17 44187492 44784639 597148 Gain 4 0.943835 108 5580 chas 15.22 Gain 32.12 Gain 29.43 Gain GainGainGain 175 64.33 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" JUBF84215 17 44187492 44784639 597148 Gain 3 0.888717 108 5580 chas 4.11 Gain 4.77 Gain 0 - GainGain- 175 64.33 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400066MA female "research_filter, clinical_filter" ZJYL67451 17 44187492 44784639 597148 Gain 3 0.902707 108 5580 chas 6.32 Gain 26.35 Gain 29.57 Gain GainGainGain 175 90.54 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401025SM male "research_filter, clinical_filter" XFEU37018 17 44187492 44784639 597148 Gain 3 0.911384 108 5580 chas 11.02 Gain 26.37 Gain 32.12 Gain GainGainGain 175 94.95 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" TJGR62389 17 44187492 44784639 597148 Gain 3 0.900072 108 5580 chas 11.02 Gain 31.3 Gain 32.12 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" HDQS55514 17 44187492 44784639 597148 Gain 3 0.899791 108 5580 chas 11.02 Gain 32.12 Gain 26.4 Gain GainGainGain 175 29.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400653GP male "research_filter, clinical_filter" NLDQ95097 17 44187492 44784639 597148 Gain 3 0.907267 108 5580 chas 4.11 Gain 26.83 Gain 29.43 Gain GainGainGain 175 91.65 "Gain,-,Loss" "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" PBCS27067 17 44187492 44784639 597148 Gain 3 0.906783 108 5580 chas 11.02 Gain 32.12 Gain 29.3 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" JQGN11749 17 44187492 44784639 597148 Gain 3 0.8901 108 5580 chas 15.29 Gain 31.77 Gain 0 - GainGain- 175 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400534ME male "research_filter, clinical_filter" ISVP82924 17 44187492 44784639 597148 Gain 3 0.90877 108 5580 chas 15.29 Gain 29.22 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401400NP male "research_filter, clinical_filter" GTDY31038 17 44187492 44784639 597148 Gain 3 0.897859 108 5580 chas 8.33 Gain 33.16 Gain 35.79 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" DOJD65755 17 44187492 44784639 597148 Gain 3 0.896051 108 5580 chas 11.31 Gain 31.53 Gain 29.3 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 402023EC female "research_filter, clinical_filter" OBHQ36250 17 44187492 44784639 597148 Gain 3 0.921523 108 5580 chas 11.9 Gain 26.35 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401011PJ female "research_filter, clinical_filter" XGQH24350 17 44187492 44784639 597148 Gain 3 0.888036 108 5580 chas 11.43 Gain 3.76 Gain 31.57 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401215MJ female "research_filter, clinical_filter" VPFM57168 17 44187492 44784639 597148 Gain 3 0.895126 108 5580 chas 15.29 Gain 27.7 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401696CG male "research_filter, clinical_filter" YDKF16445 17 44187492 44784639 597148 Gain 4 0.933409 108 5580 chas 11.02 Gain 78.48 Gain 100 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401442WR male "research_filter, clinical_filter" FNSQ39400 17 44187492 44784639 597148 Gain 3 0.913824 108 5580 chas 17.49 Gain 29.3 Gain 34.65 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" YKSB12189 17 44187492 44784639 597148 Gain 3 0.904227 108 5580 chas 17.49 Gain 25.78 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401390DG male "research_filter, clinical_filter" ZKCL87954 17 44187492 44784639 597148 Gain 4 0.910334 108 5580 chas 17.49 Gain 31.57 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" XUUY89365 17 44187492 44784639 597148 Gain 3 0.893111 108 5580 chas 3.71 Gain 31.4 Gain 29.3 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" OOSY20649 17 44187492 44784639 597148 Gain 3 0.898807 108 5580 chas 4.04 Gain 32.12 Gain 29.3 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401817MC female "research_filter, clinical_filter" QNLU68354 17 44187492 44784639 597148 Gain 3 0.896213 108 5580 chas 4.21 Gain 6.35 Gain 29.43 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401829FJ female "research_filter, clinical_filter" QKSF16477 17 44187492 44784639 597148 Gain 3 0.903678 108 5580 chas 17.49 Gain 13.11 Gain 29.43 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" NINK42890 17 44187492 44784639 597148 Gain 4 0.941609 108 5580 chas 17.49 Gain 32.12 Gain 29.25 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" JKGU55742 17 44187492 44784639 597148 Gain 4 0.916924 108 5580 chas 16.91 Gain 31.88 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400880TM male "research_filter, clinical_filter" XNFN85306 17 44187492 44784639 597148 Gain 4 0.927841 108 5580 chas 17.49 Gain 32.12 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" KJKF45195 17 44187492 44784639 597148 Gain 3 0.911087 108 5580 chas 17.49 Gain 26.83 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401132CH male "research_filter, clinical_filter" ZEGT44347 17 44187492 44784639 597148 Gain 3 0.898612 108 5580 chas 4.21 Gain 32.12 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401609MB female "research_filter, clinical_filter" PIAG15925 17 44187492 44784639 597148 Gain 3 0.90134 108 5580 chas 4.24 Gain 17.87 Gain 29.43 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400995MS female "research_filter, clinical_filter" JPSN96941 17 44187492 44784639 597148 Gain 3 0.900954 108 5580 chas 17.49 Gain 26.39 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" DQOA73385 17 44187492 44784639 597148 Gain 3 0.883543 108 5580 chas 16.91 Gain 26.83 Gain 28.44 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401592NR male "research_filter, clinical_filter" ZMNN35179 17 44187492 44784639 597148 Gain 4 0.932854 108 5580 chas 17.49 Gain 34.65 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400430KV male "research_filter, clinical_filter" ETUR65669 17 44187492 44784639 597148 Gain 3 0.876265 108 5580 chas 17.49 Gain 27.51 Gain 34.65 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401056TJ male "research_filter, clinical_filter" RBTV68848 17 44187492 44784639 597148 Gain 3 0.884261 108 5580 chas 17.49 Gain 29.25 Gain 29.25 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" OULL87238 17 44187492 44784639 597148 Gain 3 0.887342 108 5580 chas 16.91 Gain 31.4 Gain 26.78 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" NKNM36178 17 44187492 44784639 597148 Gain 3 0.886159 108 5580 chas 17.49 Gain 27.61 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400668TD male "research_filter, clinical_filter" SBJN54268 17 44187492 44784639 597148 Gain 3 0.902914 108 5580 chas 4.21 Gain 26.35 Gain 29.43 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" TDDJ68763 17 44187492 44784639 597148 Gain 3 0.914171 108 5580 chas 4.21 Gain 20.26 Gain 29.57 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401250WD female "research_filter, clinical_filter" KAYE11117 17 44187492 44784639 597148 Gain 3 0.904137 108 5580 chas 17.49 Gain 16.92 Gain 32.12 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400686BM male "research_filter, clinical_filter" AVJL63299 17 44187492 44784639 597148 Gain 3 0.904037 108 5580 chas 16.91 Gain 34.65 Gain 34.65 Gain GainGainGain 175 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" ZHGO36222 17 44187492 44784639 597148 Gain 4 0.94513 108 5580 chas 0 - 32.12 Gain 32.12 Gain #NAME? 175 NA NA NA "ChAS,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 401135CS female "research_filter, clinical_filter" KWBM98824 17 44187492 44784639 597148 Gain 4 0.951209 108 5580 chas 0 - 32.12 Gain 32.12 Gain #NAME? 175 NA NA NA "ChAS,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 401212HJ female "research_filter, clinical_filter" NQKM94057 17 44187492 44784639 597148 Gain 4 0.939241 108 5580 chas 0 - 29.3 Gain 29.43 Gain #NAME? 175 NA NA NA "ChAS,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" "446446(2|Stefansson(2005),Kidd(2008))" "597148(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 82 175 - 0 "597148(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 400917CG female "research_filter, clinical_filter" DLWB63913 17 44188298 44784639 596342 Gain 3 0.88536 107 5625 chas 3.71 Gain 34.54 Gain 34.56 Gain GainGainGain 174 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "21908#1%""17q21.3 recurrent microdeletion syndrome"":577740" "445640(2|Stefansson(2005),Kidd(2008))" "596342(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 174 - 0 "596342(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401606CG female "research_filter, clinical_filter" ZCOM63077 17 44188379 44784639 596261 Gain 3 0.880063 106 5678 chas 10.27 Gain 27.59 Gain 0 - GainGain- 173 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "21827#1%""17q21.3 recurrent microdeletion syndrome"":577740" "445559(2|Stefansson(2005),Kidd(2008))" "596261(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 173 - 0 "596261(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401936BA male "research_filter, clinical_filter" XROV61149 17 44188379 44784639 596261 Gain 3 0.880872 106 5678 chas 17.51 Gain 22.66 Gain 26.77 Gain GainGainGain 173 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "21827#1%""17q21.3 recurrent microdeletion syndrome"":577740" "445559(2|Stefansson(2005),Kidd(2008))" "596261(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 173 - 0 "596261(775|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401480PG male "research_filter, clinical_filter" AFRT86195 17 44190671 44784969 594299 Gain 3 0.885461 105 5714 chas 17.18 Gain 31.68 Gain 31.74 Gain GainGainGain 174 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "594299(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 174 - 0 "594299(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400844GP male "research_filter, clinical_filter" OFVS61400 17 44190671 44784639 593969 Gain 3 0.904977 104 5766 chas 11.99 Gain 28.88 Gain 31.76 Gain GainGainGain 172 29.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401143LK female "research_filter, clinical_filter" UZKE50615 17 44190671 44784639 593969 Gain 3 0.891085 104 5766 chas 7.84 Gain 31.76 Gain 31.76 Gain GainGainGain 172 29.22 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400789KV male "research_filter, clinical_filter" BNID76344 17 44190671 44784639 593969 Gain 3 0.90257 104 5766 chas 10.54 Gain 34.3 Gain 34.3 Gain GainGainGain 172 29.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" MRAO63769 17 44190671 44784639 593969 Gain 3 0.908175 104 5766 chas 11.56 Gain 31.57 Gain 28.85 Gain GainGainGain 172 29.22 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" MTFT89424 17 44190671 44784639 593969 Gain 3 0.902545 104 5766 chas 10.54 Gain 35.45 Gain 40.63 Gain GainGainGain 172 41.21 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" BQMP83404 17 44190671 44784639 593969 Gain 3 0.888964 104 5766 chas 11.49 Gain 30.87 Gain 28.88 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400474GF female "research_filter, clinical_filter" KKJQ91569 17 44190671 44784639 593969 Gain 3 0.88238 104 5766 chas 3.73 Gain 25.92 Gain 0 - GainGain- 172 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400258BC female "research_filter, clinical_filter" FMEA92817 17 44190671 44784639 593969 Gain 3 0.900528 104 5766 chas 4.97 Gain 31.65 Gain 31.76 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401175FA female "research_filter, clinical_filter" ZJPO23473 17 44190671 44784639 593969 Gain 3 0.895678 104 5766 chas 16.46 Gain 31.76 Gain 28.88 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401173AI male "research_filter, clinical_filter" KVGJ18529 17 44190671 44784639 593969 Gain 3 0.882982 104 5766 chas 16.46 Gain 23.27 Gain 27.22 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401636WR male "research_filter, clinical_filter" ABWI37104 17 44190671 44784639 593969 Gain 3 0.887988 104 5766 chas 17.19 Gain 27.27 Gain 34.3 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401200BD male "research_filter, clinical_filter" UJRA83281 17 44190671 44784639 593969 Gain 3 0.881056 104 5766 chas 17.19 Gain 34.3 Gain 34.3 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" AXFF10000 17 44190671 44784639 593969 Gain 3 0.898421 104 5766 chas 16.46 Gain 31.78 Gain 28.88 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400272AE male "research_filter, clinical_filter" YSDD20509 17 44190671 44784639 593969 Gain 3 0.889477 104 5766 chas 3.83 Gain 31.76 Gain 28.88 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" CBBY76424 17 44190671 44784639 593969 Loss 1 0.871419 104 5766 chas 0 - 0 - 0 - --- 172 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "19535#1%""17q21.3 recurrent microdeletion syndrome"":577740" "443267(2|Stefansson(2005),Kidd(2008))" "593969(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 172 - 0 "593969(772|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401927SK female clinical_filter MDAA91863 6 65897320 66488752 591433 Gain 3 0.901099 720 822 chas 100 Gain 99.53 Gain 100 Gain GainGainGain 422 99.96 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q12 - EYS 1 EYS 1 EYS - - "436936(35|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Itsara(2009),Redon(2006),Wheeler(2008),Shaikh(2009),Mills(2006))" "2073(6|Conrad(2009),Levy(2007),Conrad(2005),Shaikh(2009),Matsuzaki(2009))" 10 422 - 0 "561349(144|Teague(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" GAAC71530 5 43633670 44224361 590692 Gain 3 0.894562 380 1558 chas 99.41 Gain 99.7 Gain 99.7 Gain GainGainGain 263 99.41 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p12 - NNT 1 NNT 1 - - - "13524(2|Pang(2010),Park(2010))" - - 263 - 0 "376182(25|Banerjee(2011),Wong(2007),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400506GN female "research_filter, clinical_filter" RPWI18802 17 44194152 44784639 590488 Gain 3 0.881251 96 6215 chas 16.7 Gain 31.76 Gain 0 - GainGain- 169 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "16054#1%""17q21.3 recurrent microdeletion syndrome"":577740" "439786(2|Stefansson(2005),Kidd(2008))" "590488(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 169 - 0 "590488(769|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" QMEK60192 17 44194152 44784639 590488 Gain 3 0.879931 96 6215 chas 16.7 Gain 22.88 Gain 25.75 Gain GainGainGain 169 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "16054#1%""17q21.3 recurrent microdeletion syndrome"":577740" "439786(2|Stefansson(2005),Kidd(2008))" "590488(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 169 - 0 "590488(769|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401711WS male "research_filter, clinical_filter" FDGT59945 17 44194152 44784639 590488 Gain 3 0.884134 96 6215 chas 15.97 Gain 25.96 Gain 26.79 Gain GainGainGain 169 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "16054#1%""17q21.3 recurrent microdeletion syndrome"":577740" "439786(2|Stefansson(2005),Kidd(2008))" "590488(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 169 - 0 "590488(769|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401475MK male "research_filter, clinical_filter" DQHB62647 17 44194152 44784639 590488 Gain 3 0.885576 96 6215 chas 16.7 Gain 16.91 Gain 31.35 Gain GainGainGain 169 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "16054#1%""17q21.3 recurrent microdeletion syndrome"":577740" "439786(2|Stefansson(2005),Kidd(2008))" "590488(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 83 169 - 0 "590488(769|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401732HW male "research_filter, clinical_filter" BTMS28214 17 44195807 44784639 588833 Loss 1 0.872188 92 6470 chas 6.51 Loss 0 - 0 - Loss-- 167 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "14399#1%""17q21.3 recurrent microdeletion syndrome"":577740" "438131(2|Stefansson(2005),Kidd(2008))" "588833(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 167 - 0 "588833(766|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" KGUZ66103 17 44196447 44784639 588193 Loss 1 0.86256 88 6760 chas 6.52 Loss 0 - 0 - Loss-- 167 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "13759#1%""17q21.3 recurrent microdeletion syndrome"":577740" "437491(2|Stefansson(2005),Kidd(2008))" "588193(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 167 - 0 "588193(766|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401596PJ male "research_filter, clinical_filter" FGIX67905 17 44196447 44784639 588193 Loss 1 0.862746 88 6760 chas 0 - 0 - 0 - --- 167 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "13759#1%""17q21.3 recurrent microdeletion syndrome"":577740" "437491(2|Stefansson(2005),Kidd(2008))" "588193(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 167 - 0 "588193(766|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401391PJ male clinical_filter FPUC66465 17 44196447 44784639 588193 Loss 1 0.876915 88 6760 chas 0 - 0 - 0 - --- 167 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "13759#1%""17q21.3 recurrent microdeletion syndrome"":577740" "437491(2|Stefansson(2005),Kidd(2008))" "588193(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 167 - 0 "588193(766|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400827MM male clinical_filter VBTG63612 10 47587331 48174779 587449 Loss 1 0.882939 36 16784 chas 3.46 Loss 19.88 Loss 19.88 Loss LossLossLoss 192 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,CTSL1P2,ANXA8L2,FAM21B" 4 "ANTXRL,CTSL1P2,ANXA8L2,FAM21B" 4 - - "43977(2|Ahn(2009),McKernan(2009))" "587449(108|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 70 192 - 0 "587449(455|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401550SP female "research_filter, clinical_filter" NFGH10073 17 44197806 44784639 586834 Loss 1 0.876865 86 6903 chas 6.53 Loss 0 - 0 - Loss-- 165 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "12400#1%""17q21.3 recurrent microdeletion syndrome"":577740" "436132(2|Stefansson(2005),Kidd(2008))" "586834(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 165 - 0 "586834(766|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" NCJU46793 17 44198096 44784639 586544 Gain 3 0.879149 84 7066 chas 2.51 Gain 33.47 Gain 33.47 Gain GainGainGain 165 0 - - "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "12110#1%""17q21.3 recurrent microdeletion syndrome"":577740" "435842(2|Stefansson(2005),Kidd(2008))" "586544(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 165 - 0 "586544(764|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400061DE female "research_filter, clinical_filter" VBEF49630 17 44198096 44784639 586544 Loss 1 0.886128 84 7066 chas 0 - 0 - 0 - --- 165 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "12110#1%""17q21.3 recurrent microdeletion syndrome"":577740" "435842(2|Stefansson(2005),Kidd(2008))" "586544(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 165 - 0 "586544(764|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400022WA female clinical_filter APBT44417 17 44201344 44784639 583296 Gain 3 0.883159 80 7383 chas 2.07 Gain 28.36 Gain 30.51 Gain GainGainGain 162 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "8862#1%""17q21.3 recurrent microdeletion syndrome"":577740" "432594(2|Stefansson(2005),Kidd(2008))" "583296(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 162 - 0 "583296(763|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400701MM female "research_filter, clinical_filter" FSLR52955 17 44201344 44784639 583296 Loss 1 0.869111 80 7383 chas 6.57 Loss 0 - 0 - Loss-- 162 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "8862#1%""17q21.3 recurrent microdeletion syndrome"":577740" "432594(2|Stefansson(2005),Kidd(2008))" "583296(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 162 - 0 "583296(763|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" ENVJ37912 17 44201344 44784639 583296 Loss 1 0.863708 80 7383 chas 0 - 0 - 0 - --- 162 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - "8862#1%""17q21.3 recurrent microdeletion syndrome"":577740" "432594(2|Stefansson(2005),Kidd(2008))" "583296(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 84 162 - 0 "583296(763|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400532MH male clinical_filter FCFF79727 11 50013744 50595389 581646 Gain 3 0.894155 288 2026 chas 88.71 Gain 88.72 Gain 99.52 Gain GainGainGain 203 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 290306(1|Kidd(2008)) "581646(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 44 203 - 0 "581646(115|Teague(2010),Wong(2007),Redon(2006),Wang(2008),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Locke(2006),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Levy(2007),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401384BP male "research_filter, clinical_filter" GVYY53861 10 47587331 48167553 580223 Loss 1 0.883007 35 17065 chas 3.55 Loss 11.54 Loss 11.54 Loss LossLossLoss 192 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 150002(2|contig) "ANTXRL,CTSL1P2,ANXA8L2,FAM21B" 4 "ANTXRL,CTSL1P2,ANXA8L2,FAM21B" 4 - - "43977(2|Ahn(2009),McKernan(2009))" "580223(108|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 70 192 - 0 "580223(454|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401214BJ male "research_filter, clinical_filter" EATF12348 11 48392271 48972429 580159 Loss 1 0.889442 272 2140 chas 99.25 Loss 86.16 Loss 99.62 Loss LossLossLoss 209 NA NA NA "ChAS,IPN,NXS,PTK" "11p11.12,11p11.2" - OR4A47 1 OR4A47 1 - - 7475(1|Ahn(2009)) "580159(41|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Pinto(2007),Cooper(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Mills(2006))" "4102(18|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008))" 50 209 - 0 "580159(509|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400352CA female "research_filter, clinical_filter" VVRJ19010 1 147933973 148513854 579882 Loss 1 0.863958 24 25212 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 1q21.2 300002(2|contig) "PPIAL4A,PPIAL4B,PPIAL4D,NBPF14,PPIAL4F" 5 "PPIAL4A,PPIAL4B,PPIAL4D,NBPF14,PPIAL4F" 5 - - - "579882(32|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 48 2 - 0 "579882(146|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 401535RJ male - DGQM75197 11 50021093 50596467 575375 Gain 3 0.886011 288 2004 chas 82.63 Gain 95.22 Gain 87.4 Gain GainGainGain 203 92.61 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 290306(1|Kidd(2008)) "575375(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 45 202 - 0 "575375(115|Teague(2010),Wong(2007),Redon(2006),Wang(2008),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Locke(2006),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Levy(2007),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" JWHR52164 22 16888900 17463044 574145 Gain 3 0.89073 396 1453 chas 41.5 Gain 58.53 Gain 72.31 Gain GainGainGain 270 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "XKR3,ANKRD62P1-PARP4P3,GAB4,CCT8L2,HSFY1P1,psiTPTE22" 6 "XKR3,ANKRD62P1-PARP4P3,GAB4,CCT8L2,HSFY1P1,psiTPTE22" 6 - "574145#1%""Cat-Eye Syndrome (Type I)"":18591860" - "574145(54|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "1960(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Park(2010),Wheeler(2008))" 79 270 - 0 "573286(129|Conrad(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400984LD female "research_filter, clinical_filter" EMAP66239 17 44212310 44784639 572330 Loss 1 0.874084 76 7631 chas 13.74 Loss 0 - 94.78 Loss Loss-Loss 155 96.57 Loss "BS,GTC,IP6" "ChAS,IPN,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421628(2|Stefansson(2005),Kidd(2008))" "572330(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572330(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401618HR male "research_filter, clinical_filter" SJFM69248 17 44212310 44784639 572330 Loss 1 0.856983 76 7631 chas 6.7 Loss 0 - 0 - Loss-- 155 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421628(2|Stefansson(2005),Kidd(2008))" "572330(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572330(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401655DC male "research_filter, clinical_filter" EZOV24426 17 44212310 44784639 572330 Loss 1 0.873493 76 7631 chas 6.7 Loss 0 - 0 - Loss-- 155 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421628(2|Stefansson(2005),Kidd(2008))" "572330(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572330(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400454RE male "research_filter, clinical_filter" JAVP94180 17 44212310 44784639 572330 Gain 3 0.879398 76 7631 chas 0.2 Gain 24.52 Gain 23.39 Gain GainGainGain 155 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421628(2|Stefansson(2005),Kidd(2008))" "572330(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572330(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" NFIA96453 17 44212415 44784639 572225 Loss 1 0.865882 74 7838 chas 13.96 Loss 0 - 0 - Loss-- 155 0 - - "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421523(2|Stefansson(2005),Kidd(2008))" "572225(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572225(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400069CN female "research_filter, clinical_filter" MDAA91863 17 44212415 44784639 572225 Loss 1 0.855653 74 7838 chas 13.75 Loss 0 - 0 - Loss-- 155 90.13 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421523(2|Stefansson(2005),Kidd(2008))" "572225(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572225(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" IXLI37228 17 44212416 44784639 572224 Loss 1 0.856413 73 7947 chas 13.75 Loss 0 - 0 - Loss-- 155 83.92 "Loss,Gain" "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421522(2|Stefansson(2005),Kidd(2008))" "572224(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572224(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" QKWF92816 17 44212416 44784639 572224 Loss 1 0.850396 73 7947 chas 13.62 Loss 0 - 0 - Loss-- 155 0 - - "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421522(2|Stefansson(2005),Kidd(2008))" "572224(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572224(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400295PS female "research_filter, clinical_filter" NCUZ14929 17 44212416 44784639 572224 Loss 1 0.859201 73 7947 chas 13.75 Loss 0 - 0 - Loss-- 155 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421522(2|Stefansson(2005),Kidd(2008))" "572224(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 155 - 0 "572224(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401111LH male "research_filter, clinical_filter" RQNQ20012 17 44212824 44785015 572192 Loss 1 0.859591 75 7732 chas 0 - 0 - 0 - --- 157 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "572192(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 157 - 0 "572192(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401326LI female clinical_filter XBDZ94110 7 64576418 65148400 571983 Gain 3 0.886417 280 2050 chas 63.84 Gain 97.82 Gain 97.82 Gain GainGainGain 239 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 - - 439776(1|Kidd(2008)) "571983(67|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 59 238 - 0 "571983(311|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400649PS male "research_filter, clinical_filter" LTTD14271 17 44212824 44784639 571816 Loss 1 0.865779 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 88.9 "Loss,Gain" GTC "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" EGQB52790 17 44212824 44784639 571816 Loss 1 0.865216 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 61.42 Gain BS "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" GPXE42967 17 44212824 44784639 571816 Loss 1 0.852325 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 26.48 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400006DK female "research_filter, clinical_filter" RCQQ88896 17 44212824 44784639 571816 Loss 1 0.862635 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 26.48 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" KGCF91244 17 44212824 44784639 571816 Loss 1 0.860531 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 42.9 "Loss,Gain,-" "BS,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" OBWN97941 17 44212824 44784639 571816 Loss 1 0.861495 72 8053 chas 13.76 Loss 9.43 Loss 13.83 Loss LossLossLoss 154 15.8 Loss GTC "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" UFJQ31039 17 44212824 44784639 571816 Loss 1 0.85886 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 13.02 Loss GTC "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401551MB male "research_filter, clinical_filter" PZCO50940 17 44212824 44784639 571816 Loss 1 0.864284 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 47.88 "Loss,Gain" "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" QTRF59074 17 44212824 44784639 571816 Loss 1 0.866004 72 8053 chas 13.9 Loss 0 - 0 - Loss-- 154 0 - - "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400881GS female "research_filter, clinical_filter" JYCC50302 17 44212824 44784639 571816 Loss 1 0.862609 72 8053 chas 13.76 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" NQMZ66306 17 44212824 44784639 571816 Loss 1 0.855814 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401801LA male "research_filter, clinical_filter" CVWU93815 17 44212824 44784639 571816 Loss 1 0.862343 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401253MC female "research_filter, clinical_filter" YHQC23155 17 44212824 44784639 571816 Loss 1 0.852956 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401906DT female "research_filter, clinical_filter" MFZY15027 17 44212824 44784639 571816 Loss 1 0.854395 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" IZZO20602 17 44212824 44784639 571816 Loss 1 0.859711 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" SBQG40276 17 44212824 44784639 571816 Loss 1 0.856156 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400145BL female "research_filter, clinical_filter" PQBD71126 17 44212824 44784639 571816 Loss 1 0.860949 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401010HT female "research_filter, clinical_filter" THNQ55263 17 44212824 44784639 571816 Loss 1 0.858237 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400960TN female "research_filter, clinical_filter" RTCT86718 17 44212824 44784639 571816 Loss 1 0.866975 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" TZXJ50703 17 44212824 44784639 571816 Loss 1 0.861147 72 8053 chas 13.63 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" FCFF79727 17 44212824 44784639 571816 Loss 1 0.860318 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401384BP male "research_filter, clinical_filter" GNZH35610 17 44212824 44784639 571816 Loss 1 0.862205 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 402029KJ male "research_filter, clinical_filter" RCXD61683 17 44212824 44784639 571816 Loss 1 0.871942 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401465TB male "research_filter, clinical_filter" YPPO84595 17 44212824 44784639 571816 Loss 1 0.878504 72 8053 chas 6.71 Loss 0 - 0 - Loss-- 154 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" XSKZ13040 17 44212824 44784639 571816 Loss 1 0.862052 72 8053 chas 0 - 0 - 0 - --- 154 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401824MM female clinical_filter TDCE32526 17 44212824 44784639 571816 Loss 1 0.87895 72 8053 chas 0 - 0 - 0 - --- 154 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400583HS male clinical_filter JTMA20495 17 44212824 44784639 571816 Loss 1 0.855984 72 8053 chas 0 - 0 - 0 - --- 154 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 402042BJ male clinical_filter DMKI43381 17 44212824 44784639 571816 Loss 1 0.882317 72 8053 chas 0 - 0 - 0 - --- 154 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "421114(2|Stefansson(2005),Kidd(2008))" "571816(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 154 - 0 "571816(755|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400763BT female clinical_filter XMEG92101 17 44213434 44784639 571206 Loss 1 0.86062 71 8160 chas 13.77 Loss 0 - 0 - Loss-- 153 94.34 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "420504(2|Stefansson(2005),Kidd(2008))" "571206(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 153 - 0 "571206(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" BSJX70163 17 44213637 44784639 571003 Loss 1 0.863313 70 8275 chas 6.71 Loss 0 - 0 - Loss-- 153 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "420301(2|Stefansson(2005),Kidd(2008))" "571003(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 153 - 0 "571003(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401406KF male "research_filter, clinical_filter" SNEF27582 17 44214722 44784639 569918 Loss 1 0.874248 68 8506 chas 13.69 Loss 0 - 0 - Loss-- 151 100 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" VZJS13167 17 44214722 44784639 569918 Loss 1 0.873574 68 8506 chas 13.69 Loss 9.86 Loss 86.54 Loss LossLossLoss 151 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400213DB female "research_filter, clinical_filter" BOER26307 17 44214722 44784639 569918 Loss 1 0.870986 68 8506 chas 13.69 Loss 0 - 0 - Loss-- 151 24.24 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400571WV female "research_filter, clinical_filter" KEHV72339 17 44214722 44784639 569918 Loss 1 0.856463 68 8506 chas 13.69 Loss 0 - 0 - Loss-- 151 63.86 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" IAEL45337 17 44214722 44784639 569918 Loss 1 0.867499 68 8506 chas 13.69 Loss 0 - 0 - Loss-- 151 0 - - "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400424LN female "research_filter, clinical_filter" YKLI59783 17 44214722 44784639 569918 Loss 1 0.862453 68 8506 chas 6.73 Loss 0 - 0 - Loss-- 151 26.22 Loss GTC "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" VUCC31552 17 44214722 44784639 569918 Loss 1 0.87255 68 8506 chas 6.73 Loss 0 - 0 - Loss-- 151 61.63 Loss "BS,GTC" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400109LJ male "research_filter, clinical_filter" FPEA56091 17 44214722 44784639 569918 Loss 1 0.867431 68 8506 chas 6.73 Loss 0 - 0 - Loss-- 151 90.03 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" QUIW42968 17 44214722 44784639 569918 Loss 1 0.879746 68 8506 chas 13.69 Loss 0 - 0 - Loss-- 151 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400926LJ female "research_filter, clinical_filter" FGSE34256 17 44214722 44784639 569918 Loss 1 0.8637 68 8506 chas 13.67 Loss 0 - 0 - Loss-- 151 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" SFLX52247 17 44214722 44784639 569918 Gain 3 0.88979 68 8506 chas 13.69 Gain 25.87 Gain 25.87 Gain GainGainGain 151 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" DVRF47676 17 44214722 44784639 569918 Loss 1 0.8578 68 8506 chas 6.73 Loss 0 - 0 - Loss-- 151 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419216(2|Stefansson(2005),Kidd(2008))" "569918(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569918(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401847RK male "research_filter, clinical_filter" BXCR78538 3 858548 1428385 569838 Gain 3 0.908985 576 991 chas 97.36 Gain 98.55 Gain 99.66 Gain GainGainGain 550 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.3 - CNTN6 1 CNTN6 1 - - - "495363(28|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),McKernan(2009),Matsuzaki(2009),Altshuler(2010),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),McCarroll(2008),Simon-Sanchez(2007),Mills(2006))" "3606(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Shaikh(2009))" 1 550 - 0 "569838(122|Teague(2010),Redon(2006),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Wilson(2010),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401050GS female "research_filter, clinical_filter" KXKI34745 17 44214816 44784639 569824 Loss 1 0.866478 67 8633 chas 13.68 Loss 0 - 0 - Loss-- 151 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419122(2|Stefansson(2005),Kidd(2008))" "569824(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569824(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" PVOR72227 17 44214888 44784639 569752 Loss 1 0.863652 66 8765 chas 13.67 Loss 0 - 0 - Loss-- 151 24.93 Loss GTC "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419050(2|Stefansson(2005),Kidd(2008))" "569752(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569752(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" TUPR75049 17 44214888 44784639 569752 Loss 1 0.859169 66 8765 chas 13.67 Loss 0 - 0 - Loss-- 151 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "419050(2|Stefansson(2005),Kidd(2008))" "569752(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 86 151 - 0 "569752(754|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" SFLX52247 10 47120448 47688677 568230 Gain 3 0.885976 40 14570 chas 17.55 Gain 36.98 Gain 26.45 Gain GainGainGain 206 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 11 "LOC642826,LOC643650,ANXA8,FAM35B2,ANXA8L1,AGAP9,LOC728643,FAM25C,FAM25B,FAM25G,ANTXRL" 11 - - "43977(2|Ahn(2009),McKernan(2009))" "568230(96|Sebat(2004),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "2085(14|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 75 206 - 0 "568230(490|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401640WJ male research_filter QMDZ51984 8 53341961 53909944 567984 Gain 3 0.905093 486 1171 chas 100 Gain 100 Gain 100 Gain GainGainGain 355 NA NA NA "ChAS,IPN,NXS,PTK" 8q11.23 - "RB1CC1,FAM150A,NPBWR1" 3 "RB1CC1,FAM150A,NPBWR1" 3 RB1CC1 - - "177226(9|Redon(2006),Matsuzaki(2009),Perry(2008),Itsara(2009),McKernan(2009),Pinto(2007),Park(2010),Shaikh(2009))" "3042(8|Conrad(2009),Levy(2007),Matsuzaki(2009),Perry(2008),Bentley(2008))" - 355 RB1CC1#asd_candidate 1 "531466(61|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Wilson(2010),Pinto(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401979TB male "research_filter, clinical_filter" XSKZ13040 2 45408935 45976420 567486 Gain 3 0.905606 548 1037 chas 99.79 Gain 99.79 Gain 99.9 Gain GainGainGain 436 NA NA NA "ChAS,IPN,NXS,PTK" 2p21 - "SRBD1,PRKCE,UNQ6975" 3 "SRBD1,PRKCE,UNQ6975" 3 - - - "567486(11|Conrad(2009),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009),Mills(2006))" 1018(7|Matsuzaki(2009)) - 436 - 0 "388236(32|Conrad(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401824MM female "research_filter, clinical_filter" YSDD20509 X 95057196 95623047 565852 Gain 3 0.896795 308 1843 chas 100 Gain 0 - 0 - Gain-- 380 NA NA NA "ChAS,IPN" Xq21.33 - LOC643486 1 LOC643486 1 - - - "28600(5|Pang(2010),Kidd(2008),Levy(2007),Korbel(2007),Mills(2006))" 938(1|McKernan(2009)) 0 380 - 0 "401121(29|Teague(2010),Korbel(2007),Jakobsson(2008),Kidd(2010b),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Campbell(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" TDCE32526 2 45412905 45976420 563516 Gain 3 0.913336 546 1033 chas 95.16 Gain 97.97 Gain 97.56 Gain GainGainGain 433 NA NA NA "ChAS,IPN,NXS,PTK" 2p21 - "SRBD1,PRKCE,UNQ6975" 3 "SRBD1,PRKCE,UNQ6975" 3 - - - "563516(11|Conrad(2009),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009),Mills(2006))" 1018(7|Matsuzaki(2009)) - 433 - 0 "388236(32|Conrad(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400583HS male "research_filter, clinical_filter" BDYF88242 17 44222335 44784639 562305 Loss 1 0.869461 64 8925 chas 6.82 Loss 0 - 11.92 Loss Loss-Loss 144 22.3 Loss "GTC,IP6" "ChAS,IPN,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "411603(2|Stefansson(2005),Kidd(2008))" "562305(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1468(7|Conrad(2009),Wheeler(2008),Matsuzaki(2009))" 88 144 - 0 "562305(747|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" FXID76383 17 44225310 44784639 559330 Loss 1 0.862729 59 9643 chas 12.06 Loss 0 - 0 - Loss-- 142 0 - - "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408628(2|Stefansson(2005),Kidd(2008))" "559330(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 142 - 0 "559330(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401922MW male "research_filter, clinical_filter" WNMH95182 17 44225311 44784639 559329 Loss 1 0.862906 58 9812 chas 12.06 Loss 0 - 0 - Loss-- 142 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408627(2|Stefansson(2005),Kidd(2008))" "559329(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 142 - 0 "559329(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" TCSA61368 17 44225440 44784639 559200 Loss 1 0.858035 56 10167 chas 12.04 Loss 0 - 0 - Loss-- 141 88.82 "Loss,Gain" "GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" CAEK98371 17 44225440 44784639 559200 Gain 3 0.899521 56 10167 chas 12.04 Gain 27.51 Gain 0 - GainGain- 141 94.21 Gain GTC "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" VVRJ19010 17 44225440 44784639 559200 Loss 1 0.865036 56 10167 chas 6.86 Loss 0 - 0 - Loss-- 141 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" SBTA40047 17 44225440 44784639 559200 Loss 1 0.867055 56 10167 chas 12.04 Loss 0 - 0 - Loss-- 141 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401628GC female "research_filter, clinical_filter" PRED73338 17 44225440 44784639 559200 Loss 1 0.859645 56 10167 chas 0 - 0 - 0 - --- 141 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401183HP female clinical_filter NOIN63241 17 44225440 44784639 559200 Loss 1 0.859447 56 10167 chas 0 - 0 - 0 - --- 141 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408498(2|Stefansson(2005),Kidd(2008))" "559200(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "559200(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400641WJ female clinical_filter MECH38806 11 55453563 56012454 558892 Gain 3 0.89541 748 748 chas 91.48 Gain 93.36 Gain 98.73 Gain GainGainGain 408 NA NA NA "ChAS,IPN,NXS,PTK" "11q11,11q12.1" - "OR5J2,OR8H2,OR8H3,OR8I2,OR10AG1,OR5I1,OR5L1,OR5L2,OR5F1,OR5D18,OR5T2,SPRYD5,OR7E5P,OR8J3,OR5D13,OR5AS1,OR8K5,OR5D14,OR5W2,OR5D16" 20 "OR5J2,OR8H2,OR8H3,OR8I2,OR10AG1,OR5I1,OR5L1,OR5L2,OR5F1,OR5D18,OR5T2,SPRYD5,OR7E5P,OR8J3,OR5D13,OR5AS1,OR8K5,OR5D14,OR5W2,OR5D16" 20 - - 41761(1|Kidd(2008)) "439956(59|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Young(2008),McKernan(2009),Matsuzaki(2009),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Tuzun(2005),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Mills(2006))" 767(2|Matsuzaki(2009)) 10 408 - 0 "558892(176|Sebat(2004),Redon(2006),Wang(2007),Campbell(2011),Pinto(2007),Tuzun(2005),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" VPWL90389 17 44225752 44784639 558888 Loss 1 0.861669 55 10349 chas 11.99 Loss 0 - 0 - Loss-- 141 74.66 "Loss,-" "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408186(2|Stefansson(2005),Kidd(2008))" "558888(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "558888(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" RGHO54100 17 44225752 44784639 558888 Gain 3 0.894438 55 10349 chas 11.99 Gain 38.06 Gain 0 - GainGain- 141 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408186(2|Stefansson(2005),Kidd(2008))" "558888(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "558888(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" ICCB48361 17 44225752 44784639 558888 Gain 3 0.871174 55 10349 chas 0 - 23.54 Gain 24.41 Gain #NAME? 141 NA NA NA "ChAS,NXS,PTK" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408186(2|Stefansson(2005),Kidd(2008))" "558888(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "558888(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 401258PC female "research_filter, clinical_filter" STES59258 17 44225752 44784639 558888 Loss 1 0.851971 55 10349 chas 0 - 0 - 0 - --- 141 NA NA NA ChAS 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408186(2|Stefansson(2005),Kidd(2008))" "558888(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 141 - 0 "558888(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401616WP female clinical_filter PRPG47770 17 44225820 44784639 558820 Loss 1 0.864563 54 10543 chas 11.98 Loss 0 - 0 - Loss-- 140 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "408118(2|Stefansson(2005),Kidd(2008))" "558820(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 88 140 - 0 "558820(741|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401695BT female "research_filter, clinical_filter" KKRR12131 X 148824886 149382013 557128 Gain 2 0.92316 786 709 chas 100 Gain 0 - 0 - Gain-- 239 NA NA NA "ChAS,IPN" Xq28 "100002(2|clone,contig)" "LOC100272228,MAGEA8,CXorf40B,HSFX2,MAGEA9,HSFX1,MAGEA9B" 7 "LOC100272228,MAGEA8,CXorf40B,HSFX2,MAGEA9,HSFX1,MAGEA9B" 7 - - - "305479(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Kidd(2008),McCarroll(2008),Shaikh(2009))" 2752(4|Matsuzaki(2009)) 13 239 - 0 "557128(27|Wang(2007),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" ZRRL85494 17 44228770 44784639 555870 Loss 1 0.858363 49 11580 chas 11.51 Loss 0 - 0 - Loss-- 136 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "405168(2|Stefansson(2005),Kidd(2008))" "555870(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 89 136 - 0 "555870(739|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" DOIH36842 17 44228770 44784639 555870 Loss 1 0.86273 49 11580 chas 6.9 Loss 0 - 0 - Loss-- 136 NA NA NA "ChAS,IPN" 17q21.31 - "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 "NSFP1,NSF,ARL17B,LOC644246,LRRC37A2,KIAA1267,LRRC37A,ARL17A" 8 - - "405168(2|Stefansson(2005),Kidd(2008))" "555870(89|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ju(2010),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010))" "1153(6|Conrad(2009),Matsuzaki(2009))" 89 136 - 0 "555870(739|Sebat(2004),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Altshuler(2010),Perry(2008b),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" RXRT66436 16 18238276 18792698 554423 Loss 1 0.88239 20 29180 chas 2.21 Loss 0 - 0 - Loss-- 53 NA NA NA "ChAS,IPN" 16p12.3 - "ABCC6P1,NOMO2,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "ABCC6P1,NOMO2,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - - "554423(28|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Pang(2010),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" "2402(6|Shaikh(2009),Perry(2008))" 100 52 - 0 "554423(84|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),McCarroll(2008),Cooper(2008),Campbell(2011),Perry(2008b),Pinto(2011),Ju(2010),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_yes algo_yes NA 401414CR male research_filter RYTQ14327 22 22705996 23258369 552374 Loss 1 0.864847 274 2023 chas 39.29 Loss 19.61 Loss 19.6 Loss LossLossLoss 336 85.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.22 - "GGTLC2,PRAME,ZNF280B,ZNF280A,LOC648691,POM121L1P,MIR650,IGLL5" 8 "GGTLC2,PRAME,ZNF280B,ZNF280A,LOC648691,POM121L1P,MIR650,IGLL5" 8 - "552374#1%""22q11.2 distal deletion syndrome"":1580382" - "552374(208|Sebat(2004),Ju(2010),de Smith(2007),Bentley(2008),Pang(2010),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),McKernan(2009),Tuzun(2005),Itsara(2009),Levy(2007),Wang(2007),Gusev(2009),Park(2010))" "19576(38|Park(2010),Matsuzaki(2009),Shaikh(2009),Bentley(2008))" 28 336 - 0 "552374(1076|Teague(2010),Sebat(2004),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Gusev(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" TNZB91328 14 22420174 22970561 550388 Gain 3 0.877015 794 694 chas 0 - 46.46 Gain 91.9 Gain #NAME? 499 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "550388(32|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2732(18|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 499 - 0 "550388(176|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400911GA female "research_filter, clinical_filter" QKSF16477 16 32038694 32588890 550197 Loss 1 0.932661 14 42322 chas 0 - 14.88 Loss 19.25 Loss #NAME? 88 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC729264,HERC2P4,LOC390705" 3 "LOC729264,HERC2P4,LOC390705" 3 - - 435057(1|Kidd(2008)) "550197(69|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "4243(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 83 87 - 0 "550197(382|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401749DJ male research_filter NVDU55912 14 22420778 22970492 549715 Loss 1 0.892375 788 698 chas 0 - 62.44 Loss 88.78 Loss #NAME? 494 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "549715(31|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 494 - 0 "549715(170|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401307VR male "research_filter, clinical_filter" YAZD71442 4 63585883 64133930 548048 Gain 3 0.895654 329 1670 chas 94.79 Gain 100 Gain 100 Gain GainGainGain 303 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.1 - - 0 - 0 - - - "168915(21|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Altshuler(2010),Park(2010),McCarroll(2008),McCarroll(2005),Wheeler(2008),Kim(2009),Mills(2006))" "1522(5|Levy(2007),Bentley(2008),Wheeler(2008),Matsuzaki(2009),Mills(2006))" 0 303 - 0 "425753(115|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Campbell(2011),Pinto(2011),Park(2010),Mills(2006),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" ILTL12466 7 64595105 65142169 547065 Loss 1 0.900171 276 1989 chas 87.55 Loss 88.61 Loss 88.61 Loss LossLossLoss 235 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 - - 439776(1|Kidd(2008)) "547065(66|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 57 234 - 0 "547065(292|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" WKJP80388 14 22424059 22970223 546165 Gain 3 0.876962 780 701 chas 0 - 86.01 Gain 100 Gain #NAME? 484 99.29 Gain "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "546165(30|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 484 - 0 "546165(168|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400320RN male "research_filter, clinical_filter" REUG17486 14 22424059 22970223 546165 Gain 3 0.895087 780 701 chas 0 - 61.18 Gain 98.3 Gain #NAME? 484 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "546165(30|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 484 - 0 "546165(168|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401576WC female "research_filter, clinical_filter" PIAG15925 X 146355024 146897974 542951 Gain 3 0.8976 1432 379 chas 93.16 Gain 0 - 0 - Gain-- 449 NA NA NA "ChAS,IPN" Xq27.3 - "MIR514A1,MIR514A3,MIR514A2" 3 "MIR514A1,MIR514A3,MIR514A2" 3 - - - "468940(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Park(2010),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),McCarroll(2005),McCarroll(2008))" "960(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Perry(2008))" 2 449 - 0 "468940(75|Teague(2010),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),Campbell(2011),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Kidd(2010b),Tuzun(2005),Park(2010),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400995MS female "research_filter, clinical_filter" EGYT92211 3 7612688 8153070 540383 Gain 3 0.905134 516 1049 chas 92.29 Gain 99.17 Gain 100 Gain GainGainGain 513 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - GRM7 1 GRM7 1 - - - "18136(3|Pang(2010),McKernan(2009),Shaikh(2009))" "1160(7|Pang(2010),Levy(2007),Bentley(2008),Shaikh(2009),Mills(2006))" - 513 - 0 "413145(42|Wong(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401402EN male "research_filter, clinical_filter" XSMN99460 1 13169606 13709344 539739 Loss 1 0.893094 19 29985 chas 3.2 Loss 0 - 0 - Loss-- 42 NA NA NA "ChAS,IPN" 1p36.21 "150002(2|contig,clone)" "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 16 "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 16 - - - "539739(67|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),Shaikh(2009))" 926(1|Matsuzaki(2009)) 70 42 - 0 "539739(171|Sebat(2004),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Levy(2007),Wilson(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),Kim(2009),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401235IA male research_filter GNZH35610 14 22441153 22978349 537197 Loss 1 0.89378 792 679 chas 0 - 65.82 Loss 99.72 Loss #NAME? 500 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "537197(30|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 500 - 0 "537197(167|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 402029KJ male "research_filter, clinical_filter" MUIH56067 1 13174615 13709344 534730 Loss 1 0.909555 17 33420 chas 1.59 Loss 15.53 Loss 0 - LossLoss- 42 NA NA NA "ChAS,IPN,NXS" 1p36.21 "150002(2|contig,clone)" "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 16 "PRAMEF20,LOC440563,PRAMEF18,PRAMEF19,PRAMEF16,PRAMEF22,PRAMEF14,PRAMEF15,PRAMEF13,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF3,PRAMEF21,PRAMEF8,PRAMEF9" 16 - - - "534730(64|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Shaikh(2009))" 926(1|Matsuzaki(2009)) 70 42 - 0 "534730(169|Sebat(2004),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Levy(2007),Wilson(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400930MK female research_filter XNFN85306 X 138808851 139342599 533749 Gain 2 0.930953 1752 304 chas 99.19 Gain 0 - 0 - Gain-- 315 NA NA NA "ChAS,IPN" Xq27.1 - "ATP11C,MIR505,CXorf66" 3 "ATP11C,MIR505,CXorf66" 3 - - 237347(1|Kidd(2008)) "73372(5|Park(2010),McKernan(2009),Matsuzaki(2009))" "2087(6|Wang(2008),Matsuzaki(2009),Bentley(2008))" 8 315 - 0 "316725(31|Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" WMOD47474 Y 24990278 25523249 532972 Gain 2 0.869829 44 12394 chas 22.34 Gain 0 - 0 - Gain-- 16 NA NA NA "ChAS,IPN" Yq11.223 - "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 "DAZ3,DAZ2,DAZ1,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 13 DAZ1 "532972#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "532972(15|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 16 - 0 "532972(11|Teague(2010),McCarroll(2008),Perry(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401489CB male research_filter UMLY49839 11 50063587 50596467 532881 Gain 3 0.891575 260 2057 chas 88.6 Gain 86.64 Gain 100 Gain GainGainGain 191 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 290306(1|Kidd(2008)) "532881(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 43 190 - 0 "532881(113|Conrad(2009),Wong(2007),Redon(2006),Wang(2008),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Locke(2006),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" FPLE23103 16 32038694 32570932 532239 Loss 1 0.916712 12 48385 chas 4.97 Loss 9.37 Loss 0 - LossLoss- 79 NA NA NA "ChAS,IPN,NXS" 16p11.2 - "LOC729264,HERC2P4,LOC390705" 3 "LOC729264,HERC2P4,LOC390705" 3 - - 417099(1|Kidd(2008)) "532239(67|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "4243(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 85 79 - 0 "532239(365|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400337HG male research_filter NNNK99860 16 32038694 32570932 532239 Loss 1 0.923198 12 48385 chas 0 - 7.79 Loss 0 - -Loss- 79 NA NA NA "ChAS,NXS" 16p11.2 - "LOC729264,HERC2P4,LOC390705" 3 "LOC729264,HERC2P4,LOC390705" 3 - - 417099(1|Kidd(2008)) "532239(67|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008))" "4243(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" 85 79 - 0 "532239(365|Sebat(2004),Korbel(2007),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400439IM female research_filter IPKK73915 X 13089275 13618187 528913 Gain 2 0.936613 360 1473 chas 99.03 Gain 0 - 0 - Gain-- 376 99.03 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.2 - "EGFL6,ATXN3L,LOC100133123" 3 "EGFL6,ATXN3L,LOC100133123" 3 - - - 5907(1|McCarroll(2008)) 163(2|Matsuzaki(2009)) - 375 - 0 "294037(12|Jakobsson(2008),Durbin(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" VTLK66107 12 5707172 6232339 525168 Loss 1 0.91727 843 623 chas 99.96 Loss 99.98 Loss 99.98 Loss LossLossLoss 436 99.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "VWF,ANO2" 2 "VWF,ANO2" 2 VWF - - "52054(26|Conrad(2009),Ahn(2009),Matsuzaki(2009),Pang(2010),Park(2010),Shaikh(2009))" "2191(9|Levy(2007),McKernan(2009),Matsuzaki(2009))" 7 435 - 0 "525168(55|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401153HS female "research_filter, clinical_filter" KIAD94479 11 50071477 50596467 524991 Gain 3 0.922055 256 2058 chas 95.31 Gain 95.78 Gain 95.79 Gain GainGainGain 188 95.66 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 290306(1|Kidd(2008)) "524991(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 43 187 - 0 "524991(108|Conrad(2009),Wong(2007),Redon(2006),Wang(2008),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Altshuler(2010),Pinto(2011),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" MLUO94199 14 22457091 22978516 521426 Gain 3 0.890366 782 667 chas 0 - 94.3 Gain 98.44 Gain #NAME? 492 100 Gain "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "521426(30|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 492 - 0 "521426(167|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" JSHH93314 6 57548553 58069872 521320 Gain 3 0.885345 211 2482 chas 57.18 Gain 89.81 Gain 97.25 Gain GainGainGain 230 NA NA NA "ChAS,IPN,NXS,PTK" 6p11.2 - - 0 - 0 - - - "521320(24|Sebat(2004),Ahn(2009),Korbel(2007),Ju(2010),Conrad(2005),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Kidd(2008),Pinto(2007),Kim(2009),Shaikh(2009))" "466(5|Wheeler(2008),Bentley(2008),Mills(2006))" 67 230 - 0 "521320(116|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Teague(2010),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Locke(2006),Sebat(2004),Pinto(2011),Redon(2006),Ju(2010),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" AVAH45014 15 22770422 23291159 520738 Loss 1 0.908441 798 653 chas 85.33 Loss 59.91 Loss 90.5 Loss LossLossLoss 301 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "414528#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "520738(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 47 301 - 0 "520738(155|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" WMBQ46007 15 22770422 23291159 520738 Gain 3 0.901029 798 653 chas 97.32 Gain 92.7 Gain 100 Gain GainGainGain 301 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "414528#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "520738(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 47 301 - 0 "520738(155|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" ERUW26412 15 22770422 23290819 520398 Gain 3 0.902358 796 654 chas 41.28 Gain 84.98 Gain 100 Gain GainGainGain 301 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "414188#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "520398(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 47 301 - 0 "520398(155|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" YTOE66394 11 54701512 55221500 519989 Gain 3 0.885356 470 1108 chas 82.54 Gain 80.81 Gain 0 - GainGain- 144 NA NA NA "ChAS,IPN,NXS" 11q11 - "OR4A15,LOC440041,TRIM48,OR4A16" 4 "OR4A15,LOC440041,TRIM48,OR4A16" 4 - - - "519989(22|Sebat(2004),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" "2834(6|Levy(2007),Ahn(2009),Perry(2008))" 11 144 - 0 "519989(128|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Sebat(2004),Park(2010),Korbel(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" KRCX57170 17 21708189 22227728 519540 Gain 3 0.886791 319 1633 chas 80.11 Gain 62.03 Gain 100 Gain GainGainGain 229 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "17p11.2,17p11.1" - "MTRNR2L1,FAM27L,FLJ36000" 3 "MTRNR2L1,FAM27L,FLJ36000" 3 - - 4967(1|Ahn(2009)) "519540(42|Wang(2007),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),Ju(2010),Zogopoulos(2007))" "3425(14|Park(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Perry(2008))" 80 229 - 0 "519540(144|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Tuzun(2005),Durbin(2010),Bentley(2008),Pinto(2011),Korbel(2007),Kidd(2010b),Perry(2008b),Park(2010),Redon(2006),Ju(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" SEZK29585 X 18798137 19316695 518559 Gain 3 0.909346 517 1004 chas 99.24 Gain 0 - 0 - Gain-- 308 NA NA NA "ChAS,IPN" "Xp22.12,Xp22.13" - "LOC100132163,GPR64,PHKA2,PPEF1" 4 "LOC100132163,GPR64,PHKA2,PPEF1" 4 PHKA2 - - "512285(11|de Smith(2007),Pinto(2007),Matsuzaki(2009))" "2378(7|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 308 - 0 "348660(10|Conrad(2009),Teague(2010),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" VGND49817 7 64576418 65094968 518551 Loss 1 0.907156 276 1885 chas 84.85 Loss 52.76 Loss 82.11 Loss LossLossLoss 237 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 439776(1|Kidd(2008)) "518551(61|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 55 237 - 0 "518551(286|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" WHSN55625 14 22457091 22974280 517190 Gain 3 0.882336 772 670 chas 0 - 88.42 Gain 99.98 Gain #NAME? 478 72.44 Gain "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "517190(30|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 478 - 0 "517190(166|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" ERKP22336 5 18808397 19323989 515593 Loss 1 0.921855 310 1668 chas 97.07 Loss 98.93 Loss 98.93 Loss LossLossLoss 318 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.3 - - 0 - 0 - - - "448291(20|Conrad(2009),Korbel(2007),Matsuzaki(2009),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Altshuler(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" "1618(4|Pang(2010),Conrad(2009),Levy(2007),Park(2010))" 1 318 - 0 "515593(108|Conrad(2009),Wong(2007),Jakobsson(2008),Kidd(2008),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Korbel(2007),Simon-Sanchez(2007),Campbell(2011),Pinto(2011),Redon(2006),McCarroll(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" PQBD71126 15 22770422 23283131 512710 Loss 1 0.908223 763 672 chas 60.83 Loss 63.35 Loss 63.35 Loss LossLossLoss 299 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "406500#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "512710(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 299 - 0 "512710(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401010HT female "research_filter, clinical_filter" VRGJ17464 15 22770422 23282830 512409 Loss 1 0.916018 757 677 chas 86.71 Loss 60.88 Loss 91.97 Loss LossLossLoss 299 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "406199#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "512409(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 299 - 0 "512409(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401914PR male "research_filter, clinical_filter" QJEX76408 15 22770422 23282799 512378 Gain 3 0.901059 756 678 chas 78.07 Gain 66.21 Gain 100 Gain GainGainGain 299 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "406168#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "512378(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 298 - 0 "512378(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400413FJ female "research_filter, clinical_filter" SEHC73357 15 22770422 23282799 512378 Loss 1 0.899178 756 678 chas 60.87 Loss 60.89 Loss 60.89 Loss LossLossLoss 299 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "406168#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "512378(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 298 - 0 "512378(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402019MC male "research_filter, clinical_filter" WFGA96432 15 22770422 23282799 512378 Loss 1 0.916545 756 678 chas 60.87 Loss 60.89 Loss 60.89 Loss LossLossLoss 299 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 "GOLGA8IP,HERC2P2,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 8 NIPA1 "406168#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "512378(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 298 - 0 "512378(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401493HC male "research_filter, clinical_filter" SYHV89014 X 7710845 8222688 511844 Gain 2 0.93684 1000 512 chas 99.91 Gain 0 - 0 - Gain-- 409 NA NA NA "ChAS,IPN" Xp22.31 - "VCX,MIR651,VCX2,PNPLA4" 4 "VCX,MIR651,VCX2,PNPLA4" 4 - "456853#1%""Steroid sulphatase deficiency (STS)"":1725741" - "511844(32|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),Pinto(2007),Shaikh(2009),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1448(4|de Smith(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 11 409 - 0 "511844(42|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),McCarroll(2006),Durbin(2010),Bentley(2008),Kidd(2008),Simon-Sanchez(2007),Redon(2006),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" QYVK49015 Y 26510786 27022132 511347 Loss 0 0.862152 69 7519 chas 100 Loss 0 - 0 - Loss-- 73 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "511347#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "511347(15|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 73 - 0 "511347(12|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" ELGU40718 15 22770422 23281364 510943 Gain 3 0.899259 752 680 chas 61.05 Gain 60.21 Gain 91.85 Gain GainGainGain 298 71.61 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - "GOLGA8IP,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 7 "GOLGA8IP,CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 7 NIPA1 "404733#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "510943(46|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2881(11|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 46 298 - 0 "510943(152|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401259LS female "research_filter, clinical_filter" NWRU68440 7 149318962 149828687 509726 Gain 3 0.895838 200 2561 chas 42.46 Gain 57.1 Gain 100 Gain GainGainGain 252 NA NA NA "ChAS,IPN,NXS,PTK" 7q36.1 - "SSPO,KRBA1,ATP6V0E2,ZNF862,LOC401431,ZNF767,ZNF467" 7 "SSPO,KRBA1,ATP6V0E2,ZNF862,LOC401431,ZNF767,ZNF467" 7 - - - "368540(19|Itsara(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Shaikh(2009))" "3024(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008))" 48 252 - 0 "476213(95|Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Sharp(2005),Itsara(2009),Levy(2007),McKernan(2009),Kidd(2008),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),McCarroll(2008),Kidd(2010b),Locke(2006),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401064FR male "research_filter, clinical_filter" ZYKC24489 1 2694517 3202884 508368 Gain 3 0.891212 402 1267 chas 10.92 Gain 0 - 100 Gain Gain-Gain 229 NA NA NA "ChAS,IPN,PTK" 1p36.32 - "PRDM16,MIR4251,FLJ42875,ACTRT2,TTC34" 5 "PRDM16,MIR4251,FLJ42875,ACTRT2,TTC34" 5 - "508368#1%""1p36 microdeletion syndrome"":5408761" - "108748(11|Conrad(2009),Jakobsson(2008),Ju(2010),McKernan(2009),Pang(2010),Park(2010))" "5718(21|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008))" - 228 - 0 "508368(159|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Locke(2006),Perry(2008b),Pinto(2011),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" MAAD53838 7 64665478 65173706 508229 Gain 3 0.903831 262 1947 chas 97.57 Gain 98.47 Gain 98.47 Gain GainGainGain 229 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 - - 383814(1|Kidd(2008)) "508229(58|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 54 229 - 0 "508229(231|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401517PR male "research_filter, clinical_filter" LLRB50237 7 6855310 7361949 506640 Gain 3 0.903784 368 1380 chas 87.22 Gain 86.87 Gain 99.27 Gain GainGainGain 390 NA NA NA "ChAS,IPN,NXS,PTK" "7p21.3,7p22.1" - "CCZ1B,C1GALT1,LOC100131257" 3 "CCZ1B,C1GALT1,LOC100131257" 3 - - "134734(2|Feuk(2005),Kidd(2008))" "506640(17|Conrad(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),McKernan(2009),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),McCarroll(2005),Shaikh(2009),McCarroll(2008))" "2758(3|Ahn(2009),Shaikh(2009),Perry(2008))" 40 390 - 0 "506640(71|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Conrad(2006),Pinto(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),Redon(2006),Locke(2006),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" MECH38806 Y 26517404 27022375 504972 Loss 0 0.863565 68 7536 chas 100 Loss 0 - 0 - Loss-- 72 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "504972#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "504972(14|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 71 - 0 "504972(12|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" FNEG58263 Y 26517404 27022266 504863 Loss 0 0.877989 66 7767 chas 100 Loss 0 - 0 - Loss-- 71 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "504863#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "504863(14|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 71 - 0 "504863(12|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400836LK male "research_filter, clinical_filter" BYSK29073 Y 27653370 28158161 504792 Gain 2 0.851639 291 1740 chas 1.45 Gain 0 - 0 - Gain-- 192 NA NA NA "ChAS,IPN" Yq11.23 - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "380560#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "504792(12|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 323(1|Matsuzaki(2009)) 100 192 - 0 "504792(12|Locke(2006),McCarroll(2008),Perry(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" IAMC34091 7 64669460 65173706 504247 Loss 1 0.90166 260 1946 chas 100 Loss 78.91 Loss 100 Loss LossLossLoss 229 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 "INTS4L1,LOC441242,INTS4L2,ZNF92" 4 - - 379832(1|Kidd(2008)) "504247(58|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 54 229 - 0 "504247(231|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402067KS female "research_filter, clinical_filter" RFAX69878 X 114457816 114956158 498343 Gain 2 0.945327 554 901 chas 100 Gain 0 - 0 - Gain-- 266 NA NA NA "ChAS,IPN" Xq23 - "LUZP4,PLS3,LRCH2" 3 "LUZP4,PLS3,LRCH2" 3 - - - "498343(5|de Smith(2007),Conrad(2009),Kim(2009),Park(2010),Ju(2010))" 151(2|Levy(2007)) 0 266 - 0 "498343(40|Ju(2010),Teague(2010),Conrad(2009),Levy(2007),Durbin(2010),Kidd(2008),Wilson(2010),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401586RS male "research_filter, clinical_filter" LCVR91256 14 22476432 22974116 497685 Gain 3 0.888458 758 657 chas 0 - 79.44 Gain 82.47 Gain #NAME? 463 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "497685(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 463 - 0 "497685(163|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401510DG male "research_filter, clinical_filter" YLSX27992 12 130712367 131206952 494586 Gain 3 0.908636 514 964 chas 98.2 Gain 100 Gain 98.93 Gain GainGainGain 455 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - "RIMBP2,PIWIL1" 2 "RIMBP2,PIWIL1" 2 - - - "425225(49|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),McCarroll(2005),Shaikh(2009),McCarroll(2008))" "4698(23|Conrad(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 455 - 0 "452549(122|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Wang(2007),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" VXMJ58338 2 175456186 175950452 494267 Gain 3 0.892743 620 798 chas 92.96 Gain 99.74 Gain 99.96 Gain GainGainGain 298 NA NA NA "ChAS,IPN,NXS,PTK" 2q31.1 - "CHN1,WIPF1,CHRNA1,ATF2" 4 "CHN1,WIPF1,CHRNA1,ATF2" 4 "CHN1,CHRNA1" - - 1004(1|Park(2010)) "976(3|Conrad(2009),Wheeler(2008),Mills(2006))" 0 298 - 0 "87929(35|Conrad(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" UBHC61833 14 22476432 22970492 494061 Loss 1 0.888816 752 657 chas 0 - 77.49 Loss 84.45 Loss #NAME? 458 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "494061(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 458 - 0 "494061(162|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" JPSN96941 14 22481451 22974280 492830 Gain 3 0.880426 753 655 chas 0 - 64.6 Gain 96.38 Gain #NAME? 458 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "492830(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 458 - 0 "492830(163|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401612HB male "research_filter, clinical_filter" LMJA76842 8 75836509 76328743 492235 Gain 3 0.897554 320 1543 chas 98.79 Gain 93.67 Gain 100 Gain GainGainGain 277 NA NA NA "ChAS,IPN,NXS,PTK" 8q21.11 - CRISPLD1 1 CRISPLD1 1 - - - "111030(6|Conrad(2009),McKernan(2009),Matsuzaki(2009),Shaikh(2009))" "1787(9|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 0 277 - 0 "346596(72|Conrad(2009),Ahn(2009),Wong(2007),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" BSJX70163 2 110874327 111365996 491670 Gain 4 0.953121 114 4351 chas 22.19 Gain 44.07 Gain 44.07 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LIMS3,LIMS3-LOC440895,LOC100288570,LOC151009,LINC00116,NPHP1,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895" 11 "LIMS3,LIMS3-LOC440895,LOC100288570,LOC151009,LINC00116,NPHP1,LOC100507334,RGPD6,LIMS3L,RGPD5,LOC440895" 11 NPHP1 - - "219190(35|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 78 64 NPHP1#id_known 1 "454268(98|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Wang(2007),Itsara(2009),Durbin(2010),Gusev(2009),Pinto(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401406KF male "research_filter, clinical_filter" SRQH11774 14 22480324 22970223 489900 Gain 3 0.87431 744 659 chas 0 - 58.52 Gain 76.7 Gain #NAME? 449 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "489900(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 449 - 0 "489900(162|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401410BJ male "research_filter, clinical_filter" XFEU37018 7 64608269 65094968 486700 Loss 1 0.899573 272 1795 chas 68.59 Loss 55.43 Loss 86.28 Loss LossLossLoss 231 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 439776(1|Kidd(2008)) "486700(57|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 52 231 - 0 "486700(241|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" WPKS46597 7 64608269 65094968 486700 Loss 1 0.902414 272 1795 chas 100 Loss 99.65 Loss 100 Loss LossLossLoss 231 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 439776(1|Kidd(2008)) "486700(57|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 52 231 - 0 "486700(241|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400732MA female "research_filter, clinical_filter" MFZZ13533 7 64608269 65094968 486700 Loss 1 0.908527 272 1795 chas 90.4 Loss 58.07 Loss 69.62 Loss LossLossLoss 231 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 439776(1|Kidd(2008)) "486700(57|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 52 231 - 0 "486700(241|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400164SS male "research_filter, clinical_filter" UCQK65306 7 56149584 56632479 482896 Gain 3 0.893317 322 1504 chas 65.12 Gain 86.65 Gain 100 Gain GainGainGain 208 NA NA NA "ChAS,IPN,NXS,PTK" 7p11.2 - "CHCHD2,LOC389493,LOC650226,DKFZp434L192,PHKG1" 5 "CHCHD2,LOC389493,LOC650226,DKFZp434L192,PHKG1" 5 - - - "482896(16|Conrad(2009),Matsuzaki(2009),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005))" "1144(4|de Smith(2007),Pang(2010),Levy(2007),Matsuzaki(2009))" 54 208 - 0 "482896(79|Conrad(2009),Wong(2007),Perry(2008),Kidd(2010b),Teague(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Tuzun(2005),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" RMNM29531 14 22487698 22970256 482559 Gain 3 0.879542 733 659 chas 0 - 60.27 Gain 98.54 Gain #NAME? 440 81.19 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "482559(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 440 - 0 "482559(162|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" OUKT23649 14 22478961 22960757 481797 Gain 3 0.882908 727 663 chas 0 - 84.5 Gain 100 Gain #NAME? 434 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 1984(1|Ahn(2009)) "481797(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 434 - 0 "481797(161|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400450FG male "research_filter, clinical_filter" OBWN97941 14 22485472 22966744 481273 Gain 3 0.869981 724 665 chas 0 - 49.9 Gain 100 Gain #NAME? 432 74.97 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "481273(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 432 - 0 "481273(162|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" DWHR77544 14 106079823 106560963 481141 Loss 1 0.908588 181 2673 chas 100 Loss 94.79 Loss 100 Loss LossLossLoss 166 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - "ADAM6,KIAA0125" 2 "ADAM6,KIAA0125" 2 - - "132309(3|Kidd(2008),Ahn(2009))" "481141(171|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Park(2010),Pang(2010),Kidd(2008),Cooper(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Itsara(2009),Shaikh(2009))" "9613(29|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 53 166 - 0 "481141(1348|Sebat(2004),Korbel(2007),Wang(2007),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401468RL male "research_filter, clinical_filter" YWSA20061 3 41349794 41830781 480988 Loss 1 0.932944 480 1004 chas 98.68 Loss 98.19 Loss 97.21 Loss LossLossLoss 294 97.58 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.1 - ULK4 1 ULK4 1 - - "4891(2|McKernan(2009),Korbel(2007))" "188844(20|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Bentley(2008),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008))" "1664(4|Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008))" 4 294 - 0 "480988(54|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2011),McKernan(2009),Altshuler(2010),Durbin(2010),Bentley(2008),Kidd(2008),Korbel(2007),Campbell(2011),Park(2010),Pinto(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" DZVA59681 Y 27656941 28137413 480473 Gain 2 0.853099 248 1945 chas 7.2 Gain 0 - 0 - Gain-- 188 NA NA NA "ChAS,IPN" Yq11.23 - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "376989#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "480473(11|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 323(1|Matsuzaki(2009)) 100 187 - 0 "480473(10|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" VAOW46427 7 88152778 88633055 480278 Gain 3 0.905658 509 945 chas 96.61 Gain 99.93 Gain 100 Gain GainGainGain 371 99.86 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "7q21.13,7q21.12" - "C7orf62,ZNF804B" 2 "C7orf62,ZNF804B" 2 - - 1742(1|Ahn(2009)) "480278(14|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Pinto(2007),Shaikh(2009))" 1(1|Levy(2007)) 0 371 - 0 "480278(41|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2007),Pinto(2011),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" PQBD71126 7 57121001 57600999 479999 Gain 3 0.895202 422 1140 chas 83.3 Gain 98.92 Gain 99.26 Gain GainGainGain 328 NA NA NA "ChAS,IPN,NXS,PTK" 7p11.2 - "ZNF479,GUSBP10,ZNF716,MIR3147" 4 "ZNF479,GUSBP10,ZNF716,MIR3147" 4 - - - "479999(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Itsara(2009),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),Shaikh(2009))" "4772(14|Ahn(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 81 328 - 0 "435369(93|Teague(2010),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Tuzun(2005),Pinto(2011),Park(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401010HT female "research_filter, clinical_filter" VAON88685 2 110504319 110983418 479100 Loss 1 0.92375 115 4202 chas 22.87 Loss 23.89 Loss 27.77 Loss LossLossLoss 85 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,LIMS3-LOC440895,LOC100288570,NPHP1,LIMS3,MALL,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 11 "LINC00116,LIMS3-LOC440895,LOC100288570,NPHP1,LIMS3,MALL,RGPD6,LIMS3L,RGPD5,LOC440895,MIR4267" 11 NPHP1 - 142915(1|Kidd(2008)) "478254(38|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 75 84 NPHP1#id_known 1 "479100(109|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Locke(2006),Gusev(2009),Pinto(2007),Wang(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" CQAD90614 11 50097189 50573869 476681 Gain 3 0.903452 245 1953 chas 45.4 Gain 96.9 Gain 100 Gain GainGainGain 178 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 283788(1|Kidd(2008)) "476681(24|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 42 178 - 0 "476681(102|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Wang(2007),Itsara(2009),Levy(2007),Altshuler(2010),Wang(2008),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401346FJ female "research_filter, clinical_filter" RFAX69878 X 46029115 46504089 474975 Gain 2 0.940616 464 1025 chas 97.94 Gain 0 - 0 - Gain-- 264 NA NA NA "ChAS,IPN" "Xp11.23,Xp11.3" - "ZNF674,ZNF673,LOC401588,CHST7,SLC9A7" 5 "ZNF674,ZNF673,LOC401588,CHST7,SLC9A7" 5 ZNF674 - - 1867(1|Conrad(2009)) - 1 264 ZNF674#id_known 1 "342094(14|Conrad(2009),Durbin(2010),Shaikh(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401586RS male "research_filter, clinical_filter" RTCT86718 Y 25837332 26311128 473797 Gain 2 0.857687 280 1698 chas 85.78 Gain 0 - 0 - Gain-- 190 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "473797#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "473797(9|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 190 - 0 "441179(7|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" YMNO36133 1 245689560 246163161 473602 Gain 3 0.905066 572 829 chas 100 Gain 100 Gain 100 Gain GainGainGain 427 99.96 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "KIF26B,SMYD3" 2 "KIF26B,SMYD3" 2 - - 246947(1|Kidd(2008)) "121208(16|Conrad(2009),Redon(2006),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Shaikh(2009))" "5784(26|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 0 427 - 0 "459535(121|Teague(2010),Ahn(2009),Itsara(2009),Redon(2006),Kidd(2010),Conrad(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Park(2010),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" VUFI80076 20 8100169 8572225 472057 Gain 3 0.897682 548 862 chas 99.9 Gain 99.93 Gain 100 Gain GainGainGain 395 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.3 - PLCB1 1 PLCB1 1 PLCB1 - - "472057(7|Redon(2006),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" "2985(9|Conrad(2009),Matsuzaki(2009),McKernan(2009),Bentley(2008),Park(2010),Wheeler(2008),Kim(2009))" - 395 - 0 "472057(65|Conrad(2009),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" JFDL89779 7 64623362 65094968 471607 Loss 1 0.91582 268 1766 chas 93.29 Loss 61.85 Loss 89.39 Loss LossLossLoss 231 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 425930(1|Kidd(2008)) "471607(56|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 50 231 - 0 "471607(236|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401526WB male "research_filter, clinical_filter" CWFZ39975 11 50306193 50776606 470414 Gain 3 0.893898 104 4567 chas 12.55 Gain 60.34 Gain 71.43 Gain GainGainGain 83 69.27 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p11.12 - LOC646813 1 LOC646813 1 - - 74784(1|Kidd(2008)) "470414(19|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" "605(3|Wang(2008),Levy(2007))" 7 83 - 0 "470414(296|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" BKFI83925 14 22526881 22995788 468908 Gain 3 0.89077 732 641 chas 0 - 82.28 Gain 96.3 Gain #NAME? 446 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "468908(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 446 - 0 "468908(164|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401990PR male "research_filter, clinical_filter" ERKP22336 8 138783637 139250473 466837 Gain 3 0.913992 388 1206 chas 93.2 Gain 100 Gain 100 Gain GainGainGain 434 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - FAM135B 1 FAM135B 1 - - - "97735(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),McKernan(2009),Bentley(2008),Altshuler(2010),Wheeler(2008),Mills(2006))" "5196(17|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008),Shaikh(2009),Mills(2006))" - 434 - 0 "414836(127|Banerjee(2011),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Itsara(2009),Altshuler(2010),Pinto(2011),Teague(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" QITC50272 16 31461388 31927086 465699 Gain 3 0.89179 362 1290 chas 86.5 Gain 91.58 Gain 97.53 Gain GainGainGain 208 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "ZNF720,AHSP,C16orf58,CSDAP1,SLC5A2,ZNF267,KIAA0664L3,TGFB1I1,ARMC5" 9 "ZNF720,AHSP,C16orf58,CSDAP1,SLC5A2,ZNF267,KIAA0664L3,TGFB1I1,ARMC5" 9 SLC5A2 - - "4032(3|Conrad(2009),McKernan(2009),Bentley(2008))" - 29 207 - 0 "465699(32|Banerjee(2011),Wong(2007),Conrad(2009),Schuster(2010),Durbin(2010),Bentley(2008),Kidd(2008),Perry(2008b),Pinto(2011),McKernan(2009))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" AEUU95723 3 143172511 143637508 464998 Gain 3 0.905817 572 814 chas 95.58 Gain 99.09 Gain 97.67 Gain GainGainGain 356 NA NA NA "ChAS,IPN,NXS,PTK" 3q24 - SLC9A9 1 SLC9A9 1 SLC9A9 - - "8681(6|de Smith(2007),Conrad(2009),McKernan(2009),Matsuzaki(2009))" "1377(4|Matsuzaki(2009),Perry(2008),Bentley(2008))" 0 356 SLC9A9#asd_known 1 "275182(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402073LQ male "research_filter, clinical_filter" PEZC72297 Y 27656941 28119802 462862 Gain 2 0.845075 212 2193 chas 2.99 Gain 0 - 0 - Gain-- 188 0 - - "ChAS,IPN" Yq11.23 - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "376989#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "462862(9|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 323(1|Matsuzaki(2009)) 100 187 - 0 "462862(10|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400298ME male "research_filter, clinical_filter" NKHQ61532 14 22533894 22995123 461230 Gain 3 0.882223 718 643 chas 0 - 84.61 Gain 94.47 Gain #NAME? 441 92.56 Gain "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "461230(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 441 - 0 "461230(164|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" DUXB26784 14 22510089 22970492 460404 Loss 1 0.868875 716 643 chas 0 - 45.13 Loss 93.58 Loss #NAME? 427 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "460404(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 427 - 0 "460404(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401519SA female "research_filter, clinical_filter" GHAL32977 14 22510089 22969094 459006 Gain 3 0.877935 704 652 chas 0 - 66.52 Gain 93.94 Gain #NAME? 418 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "459006(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 418 - 0 "459006(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401734PG male "research_filter, clinical_filter" BYSK29073 Y 25856645 26311128 454484 Gain 2 0.860355 252 1810 chas 65.15 Gain 0 - 0 - Gain-- 185 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "454484#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "454484(9|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 185 - 0 "421866(7|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" KSNB36135 21 23667121 24120841 453721 Loss 1 0.914487 296 1538 chas 99.52 Loss 99.76 Loss 99.76 Loss LossLossLoss 339 NA NA NA "ChAS,IPN,NXS,PTK" "21q21.2,21q21.1" - - 0 - 0 - - - "149008(7|Park(2010),Kidd(2008),Redon(2006),Matsuzaki(2009),Shaikh(2009))" - 1 339 - 0 "265042(33|Wong(2007),Redon(2006),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401677MM female "research_filter, clinical_filter" ETUR65669 Y 9620972 10073965 452994 Gain 2 0.897507 204 2231 chas 100 Gain 0 - 0 - Gain-- 198 NA NA NA "ChAS,IPN" Yp11.2 - "TTTY23B,TTTY23,TTTY22" 3 "TTTY23B,TTTY23,TTTY22" 3 - - 79640(1|Ahn(2009)) "57266(15|Ahn(2009),Matsuzaki(2009),Perry(2008))" 1257(2|Perry(2008)) 64 198 - 0 "452994(166|Ahn(2009),Redon(2006),Perry(2008),Wang(2008),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401056TJ male "research_filter, clinical_filter" ALWU32623 5 12780942 13231184 450243 Gain 3 0.906614 524 860 chas 100 Gain 100 Gain 100 Gain GainGainGain 163 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "144787(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Pinto(2007),Park(2010),Jakobsson(2008),Kim(2009),McCarroll(2008))" "956(2|Matsuzaki(2009),Perry(2008))" - 163 - 0 "450243(105|Conrad(2009),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Pinto(2007),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Park(2010),Pinto(2011),Redon(2006),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400595CP female "research_filter, clinical_filter" RNZZ40210 19 23621430 24071154 449725 Loss 1 0.911026 438 1029 chas 100 Loss 100 Loss 100 Loss LossLossLoss 318 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - "ZNF675,ZNF681,RPSAP58" 3 "ZNF675,ZNF681,RPSAP58" 3 - - - "449725(26|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Mills(2006))" "2311(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008),Mills(2006))" 9 318 - 0 "449725(134|Teague(2010),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),Pinto(2007),Pinto(2011),Jakobsson(2008),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" RYTQ14327 14 22510089 22959362 449274 Gain 3 0.873489 684 657 chas 0 - 57.27 Gain 95.96 Gain #NAME? 396 81.21 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "449274(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 396 - 0 "449274(156|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" ZSEZ81141 14 22519828 22969094 449267 Loss 1 0.877036 698 644 chas 0 - 63.36 Loss 68.46 Loss #NAME? 411 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "449267(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 411 - 0 "449267(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" JWHR52164 4 189929493 190378189 448697 Gain 3 0.899942 520 864 chas 95.46 Gain 91.27 Gain 100 Gain GainGainGain 343 NA NA NA "ChAS,IPN,NXS,PTK" 4q35.2 - - 0 - 0 - - - "448697(63|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "10720(60|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Altshuler(2010),Wheeler(2008),Mills(2006))" 1 343 - 0 "448697(296|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400984LD female "research_filter, clinical_filter" NJNE14201 11 21804083 22252650 448568 Loss 1 0.906381 386 1165 chas 99.19 Loss 99.26 Loss 99.67 Loss LossLossLoss 299 NA NA NA "ChAS,IPN,NXS,PTK" 11p14.3 - ANO5 1 ANO5 1 ANO5 - - "203597(13|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Matsuzaki(2009),Altshuler(2010),Park(2010),Redon(2006))" 919(2|Matsuzaki(2009)) 1 299 - 0 "324779(58|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Park(2010),Altshuler(2010),Pinto(2011),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401393JW male "research_filter, clinical_filter" LCVR91256 Y 26592404 27040609 448206 Loss 0 0.90528 72 6312 chas 5.81 Loss 0 - 0 - Loss-- 71 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "448206#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "448206(11|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 71 - 0 "448206(12|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401510DG male "research_filter, clinical_filter" XNFN85306 3 21712867 22160149 447283 Loss 1 0.911338 406 1104 chas 100 Loss 99.36 Loss 99.36 Loss LossLossLoss 481 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.3 - ZNF385D 1 ZNF385D 1 - - - "375897(25|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Shaikh(2009))" 971(1|Park(2010)) - 481 - 0 "411066(89|Teague(2010),Korbel(2007),Redon(2006),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Shaikh(2009),Kidd(2008),Wilson(2010),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" GTDY31038 11 132824078 133269149 445072 Gain 3 0.897166 766 581 chas 80.18 Gain 98.11 Gain 100 Gain GainGainGain 373 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - OPCML 1 - 0 OPCML - - "445072(9|Pang(2010),Pinto(2007),Matsuzaki(2009),Shaikh(2009),Zogopoulos(2007))" "3037(6|Wang(2008),Park(2010),McKernan(2009),Matsuzaki(2009),Shaikh(2009))" - 373 - 0 "140692(27|Teague(2010),Wang(2008),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" MGJJ89085 7 64651627 65094968 443342 Gain 3 0.901553 260 1711 chas 67.74 Gain 93.03 Gain 95.57 Gain GainGainGain 227 65.69 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 397665(1|Kidd(2008)) "443342(52|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 47 227 - 0 "443342(206|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" JILG60414 13 20064842 20508000 443159 Gain 3 0.881997 505 879 chas 23.64 Gain 71.95 Gain 97.43 Gain GainGainGain 223 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.11 - "TPTE2,MPHOSPH8,PSPC1,ZMYM5" 4 "TPTE2,MPHOSPH8,PSPC1,ZMYM5" 4 - - - "417771(17|Conrad(2009),Matsuzaki(2009),Perry(2008),Altshuler(2010),Park(2010),McCarroll(2008),McCarroll(2005),Shaikh(2009))" 322(1|Shaikh(2009)) 28 223 - 0 "443159(54|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Itsara(2009),Campbell(2011),Durbin(2010),Locke(2006),Altshuler(2010),Perry(2008b),Pinto(2011),Park(2010),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400278PD male "research_filter, clinical_filter" PAIU48992 14 22526881 22969566 442686 Gain 3 0.87693 700 633 chas 0 - 80.85 Gain 99.94 Gain #NAME? 410 83.48 Gain "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "442686(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 410 - 0 "442686(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" ZZDG28391 11 50130828 50573143 442316 Gain 3 0.885539 220 2019 chas 59 Gain 100 Gain 98.63 Gain GainGainGain 157 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - "LOC441601,LOC646813" 2 "LOC441601,LOC646813" 2 - - 250149(1|Kidd(2008)) "442316(20|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" "1664(3|Wang(2008),Levy(2007),Perry(2008))" 38 157 - 0 "442316(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Wang(2007),Itsara(2009),Levy(2007),Altshuler(2010),Wang(2008),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" EXZC47846 X 140340737 140783042 442306 Gain 3 0.90462 244 1820 chas 93.02 Gain 0 - 0 - Gain-- 229 97.16 Gain "BS,GTC,IP6" "ChAS,IPN" Xq27.2 - "SPANXA2-OT1,SPANXA1,SPANXA2" 3 "SPANXA2-OT1,SPANXA1,SPANXA2" 3 - - 382758(2|Kidd(2008)) "435847(26|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 36 228 - 0 "442306(65|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Sharp(2005),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Campbell(2011),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400468OB female "research_filter, clinical_filter" TCTA60809 X 140340737 140783042 442306 Loss 1 0.911861 244 1820 chas 100 Loss 0 - 0 - Loss-- 229 NA NA NA "ChAS,IPN" Xq27.2 - "SPANXA2-OT1,SPANXA1,SPANXA2" 3 "SPANXA2-OT1,SPANXA1,SPANXA2" 3 - - 382758(2|Kidd(2008)) "435847(26|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 36 228 - 0 "442306(65|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Sharp(2005),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Campbell(2011),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401965TG female "research_filter, clinical_filter" TZGC22320 Y 20583739 21024601 440863 Gain 2 0.947215 278 1591 chas 99.55 Gain 0 - 0 - Gain-- 245 0 - - "ChAS,IPN" Yq11.222 - "HSFY1,HSFY2,TTTY9A,TTTY9B" 4 "HSFY1,HSFY2,TTTY9A,TTTY9B" 4 - "440863#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "90986(5|Matsuzaki(2009),Perry(2008))" 1325(7|Matsuzaki(2009)) 91 244 - 0 "424341(5|Teague(2010),Levy(2007),Redon(2006),Perry(2008))" TRUE TRUE ipn_yes algo_yes affy6_no 401295HB male "research_filter, clinical_filter" OUAW94182 15 32003538 32444196 440659 Gain 3 0.904176 574 769 chas 98.2 Gain 98.17 Gain 98.2 Gain GainGainGain 369 NA NA NA "ChAS,IPN,NXS,PTK" 15q13.3 - CHRNA7 1 CHRNA7 1 CHRNA7 "440659#1%""15q13.3 microdeletion syndrome"":1931488" 440659(1|Kidd(2008)) "440659(24|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "897(4|Wang(2008),Pang(2010),Levy(2007),Ahn(2009))" 5 369 - 0 "440659(84|Sebat(2004),Redon(2006),Wang(2007),Wang(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402063WM female "research_filter, clinical_filter" DDLZ80520 6 62486662 62927082 440421 Loss 1 0.924646 476 927 chas 99.83 Loss 99.89 Loss 99.89 Loss LossLossLoss 256 NA NA NA "ChAS,IPN,NXS,PTK" 6q11.1 - KHDRBS2 1 KHDRBS2 1 - - - "435498(4|de Smith(2007),Conrad(2009),Wheeler(2008),McCarroll(2008))" "384(2|Levy(2007),Bentley(2008))" 0 256 - 0 "440421(24|Conrad(2009),Itsara(2009),Levy(2007),Iafrate(2004),Durbin(2010),Bentley(2008),McCarroll(2008),Campbell(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401892MJ female "research_filter, clinical_filter" DZVA59681 Y 25848007 26288063 440057 Gain 2 0.868372 248 1781 chas 70.4 Gain 0 - 0 - Gain-- 186 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "440057#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "440057(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 186 - 0 "430464(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" WMOD47474 Y 25848007 26288063 440057 Gain 2 0.841878 248 1781 chas 86.4 Gain 0 - 0 - Gain-- 186 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "TTTY3B,TTTY3,CDY1B,CDY1" 4 "TTTY3B,TTTY3,CDY1B,CDY1" 4 - "440057#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "440057(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 186 - 0 "430464(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" PYXL51166 14 22526881 22966491 439611 Loss 1 0.882947 689 638 chas 0 - 0 - 74.52 Loss #NAME? 403 75.64 Loss GTC "ChAS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "439611(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 403 - 0 "439611(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401146US female "research_filter, clinical_filter" WUMM65746 14 22526881 22966491 439611 Loss 1 0.869029 689 638 chas 0 - 24.11 Loss 98.41 Loss #NAME? 403 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "439611(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 403 - 0 "439611(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" FYVR80369 14 22526881 22966418 439538 Gain 3 0.865725 688 639 chas 0 - 40.29 Gain 97.73 Gain #NAME? 403 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "439538(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 403 - 0 "439538(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401448BJ male "research_filter, clinical_filter" QMEK60192 15 32011476 32446830 435355 Gain 3 0.903087 574 759 chas 89.35 Gain 95.71 Gain 100 Gain GainGainGain 368 NA NA NA "ChAS,IPN,NXS,PTK" 15q13.3 - CHRNA7 1 CHRNA7 1 CHRNA7 "435355#1%""15q13.3 microdeletion syndrome"":1931488" 435355(1|Kidd(2008)) "435355(30|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "897(4|Wang(2008),Pang(2010),Levy(2007),Ahn(2009))" 4 368 - 0 "435355(90|Sebat(2004),Redon(2006),Wang(2007),Wang(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401711WS male "research_filter, clinical_filter" XZOF13341 16 79702573 80135538 432966 Gain 3 0.898066 420 1033 chas 99.91 Gain 99.94 Gain 100 Gain GainGainGain 512 NA NA NA "ChAS,IPN,NXS,PTK" 16q23.2 - - 0 - 0 - - - "86567(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009))" "1659(4|Pang(2010),Park(2010),Levy(2007))" 0 512 - 0 "252573(30|Conrad(2009),Wong(2007),Jakobsson(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" PTGD86385 14 22526881 22959826 432946 Gain 3 0.876279 681 636 chas 0 - 75.32 Gain 100 Gain #NAME? 392 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 1053(1|Ahn(2009)) "432946(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 392 - 0 "432946(156|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401262RR male "research_filter, clinical_filter" VAOW46427 14 22533887 22966744 432858 Gain 3 0.872848 683 634 chas 0 - 34.66 Gain 70.82 Gain #NAME? 401 90.45 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "432858(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 401 - 0 "432858(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" XCWR96625 15 32011476 32444044 432569 Gain 3 0.90133 570 760 chas 93.14 Gain 100 Gain 100 Gain GainGainGain 367 NA NA NA "ChAS,IPN,NXS,PTK" 15q13.3 - CHRNA7 1 CHRNA7 1 CHRNA7 "432569#1%""15q13.3 microdeletion syndrome"":1931488" 432569(1|Kidd(2008)) "432569(23|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "897(4|Wang(2008),Pang(2010),Levy(2007),Ahn(2009))" 3 366 - 0 "432569(83|Sebat(2004),Redon(2006),Wang(2007),Wang(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400158FB male "research_filter, clinical_filter" DCUN59806 14 87960491 88391333 430843 Loss 1 0.921197 312 1385 chas 98.82 Loss 99.41 Loss 99.41 Loss LossLossLoss 260 NA NA NA "ChAS,IPN,NXS,PTK" 14q31.3 - - 0 - 0 - - - "41018(4|Kim(2009),Redon(2006),Shaikh(2009),Mills(2006))" 154(2|Mills(2006)) - 260 - 0 "47875(18|Redon(2006),Kim(2009),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" MGJJ89085 14 43818547 44248654 430108 Gain 3 0.901447 288 1498 chas 96.56 Gain 98.97 Gain 99.97 Gain GainGainGain 207 89.41 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "430108(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 207 - 0 "430108(43|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" PDHC59420 Y 27795768 28223729 427962 Loss 0 0.822767 173 2488 chas 96.18 Loss 0 - 0 - Loss-- 158 NA NA NA "ChAS,IPN" Yq11.23 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "238162#1%""AZFc"":3056505" - "416748(10|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 323(1|Matsuzaki(2009)) 100 158 - 0 "427962(9|Locke(2006),McCarroll(2008),Perry(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" PTKC28903 15 22770422 23195725 425304 Loss 1 0.905955 716 594 chas 73.34 Loss 76.37 Loss 73.35 Loss LossLossLoss 279 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 6 "CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 6 NIPA1 "319094#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "425304(42|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2100(10|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 35 279 - 0 "425304(136|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400442FE female "research_filter, clinical_filter" ICZT95489 15 22770422 23195725 425304 Gain 3 0.895804 716 594 chas 92.42 Gain 74.75 Gain 99.54 Gain GainGainGain 279 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - "CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 6 "CYFIP1,NIPA2,NIPA1,LOC283683,WHAMMP3,TUBGCP5" 6 NIPA1 "319094#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "425304(42|McCarroll(2008),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Itsara(2009),Jakobsson(2008),Mills(2006),Shaikh(2009),Zogopoulos(2007))" "2100(10|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 35 279 - 0 "425304(136|Teague(2010),Korbel(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Conrad(2006),Kidd(2008),Altshuler(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401386WA male "research_filter, clinical_filter" DUEF32956 14 43826201 44248654 422454 Gain 3 0.898397 284 1492 chas 98.15 Gain 98.97 Gain 99.97 Gain GainGainGain 203 98.26 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "422454(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 203 - 0 "422454(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401190WC male "research_filter, clinical_filter" VAOW46427 14 43826201 44248403 422203 Gain 3 0.903488 283 1497 chas 98.36 Gain 99.03 Gain 99.18 Gain GainGainGain 203 98.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "422203(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 203 - 0 "422203(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" CUZZ77277 14 43826201 44248403 422203 Gain 3 0.895593 283 1497 chas 98.36 Gain 99.18 Gain 100 Gain GainGainGain 203 98.32 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "422203(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 203 - 0 "422203(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" LNYN65073 2 197539469 197960385 420917 Gain 3 0.906776 354 1192 chas 98.6 Gain 98.77 Gain 100 Gain GainGainGain 207 98.29 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q33.1 - "PGAP1,ANKRD44,LOC100130452,GTF3C3,CCDC150,C2orf66" 6 "PGAP1,ANKRD44,LOC100130452,GTF3C3,CCDC150,C2orf66" 6 - "420917#1%""2q33.1 deletion syndrome"":8281852" - 52115(2|Matsuzaki(2009)) - - 207 - 0 "214921(25|Pinto(2011),Kidd(2008),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401924ST male "research_filter, clinical_filter" PUOR77387 7 64674220 65094968 420749 Gain 3 0.89745 248 1703 chas 72.8 Gain 100 Gain 100 Gain GainGainGain 222 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "INTS4L1,ZNF92" 2 "INTS4L1,ZNF92" 2 - - 375072(1|Kidd(2008)) "420749(52|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "3037(12|Matsuzaki(2009),Perry(2008),Bentley(2008))" 44 222 - 0 "420749(206|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401603HH female "research_filter, clinical_filter" FSQK31243 1 16865795 17286266 420472 Loss 1 0.906303 8 60067 chas 0 - 0 - 0 - --- 199 15.96 Gain BS ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400863SS female - HBQS50118 1 16865795 17286266 420472 Loss 1 0.909336 8 60067 chas 0 - 0 - 0 - --- 199 16.98 "Gain,Loss" "BS,IP6" ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400205SP_1 male - ZJNH41176 1 16865795 17286266 420472 Loss 1 0.927588 8 60067 chas 0 - 0 - 0 - --- 199 15.96 Gain BS ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400285FA female - MAAD53838 1 16865795 17286266 420472 Loss 1 0.921094 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401517PR male - BHQW11777 1 16865795 17286266 420472 Loss 1 0.916299 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401027KW male - QITC50272 1 16865795 17286266 420472 Loss 1 0.916438 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401012TP female - TRVK84587 1 16865795 17286266 420472 Loss 1 0.92265 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401288LD male - EATF12348 1 16865795 17286266 420472 Loss 1 0.908491 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400352CA female - LYLV54353 1 16865795 17286266 420472 Loss 1 0.93281 8 60067 chas 0 - 0 - 0 - --- 199 NA NA NA ChAS 1p36.13 50001(1|clone) "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 "CROCCP2,NBPF1,CROCC,ESPNP,MIR3675,MST1P2,MST1P9" 7 - - "308638(4|Kidd(2008),Ahn(2009),Korbel(2007))" "420472(115|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "313(2|Wheeler(2008),Mills(2006))" 86 199 - 0 "420472(335|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Perry(2008b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401506LK male - TLUK35377 6 57324684 57743990 419307 Gain 3 0.882759 267 1576 chas 33.18 Gain 33 Gain 100 Gain GainGainGain 210 74.88 "-,Gain" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p11.2 - PRIM2 1 PRIM2 1 - - 3459(1|Ahn(2009)) "419307(44|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" "2107(15|Ahn(2009),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008),Mills(2006))" 14 210 - 0 "419307(239|Teague(2010),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Conrad(2009),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2010),Kidd(2008),Wilson(2010),Pang(2010),Pinto(2011),Redon(2006),Ju(2010),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" RFXX95002 10 47587331 48006310 418980 Loss 1 0.903933 20 22051 chas 24.82 Loss 27.99 Loss 27.99 Loss LossLossLoss 189 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 100001(1|contig) "ANTXRL,ANXA8L2,FAM21B" 3 "ANTXRL,ANXA8L2,FAM21B" 3 - - "43977(2|Ahn(2009),McKernan(2009))" "418980(97|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "2276(15|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 70 189 - 0 "418980(425|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401773AM male research_filter VUCC31552 Y 26584214 27002724 418511 Gain 2 0.890118 32 13500 chas 79.32 Gain 0 - 0 - Gain-- 68 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 "DAZ3,DAZ2,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 12 - "418511#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "418511(11|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 67 - 0 "418511(11|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" FALSE TRUE ipn_yes algo_yes affy6_no 400109LJ male research_filter JYCC50302 16 18770811 19189192 418382 Gain 3 0.905542 362 1158 chas 95.03 Gain 99.39 Gain 99.39 Gain GainGainGain 216 NA NA NA "ChAS,IPN,NXS,PTK" 16p12.3 - "TMC7,ITPRIPL2,ARL6IP1,RPS15A,SMG1,COQ7,SYT17" 7 "TMC7,ITPRIPL2,ARL6IP1,RPS15A,SMG1,COQ7,SYT17" 7 - - - "327337(24|Wang(2007),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Pang(2010),Pinto(2007),Wheeler(2008),Mills(2006))" 187(1|Bentley(2008)) 26 216 - 0 "418382(65|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Wang(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2007),Perry(2008b),Locke(2006),Korbel(2007),De(Smith_2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" OBWN97941 15 32011476 32428067 416592 Gain 3 0.898337 550 758 chas 82.41 Gain 97.89 Gain 100 Gain GainGainGain 353 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q13.3 - CHRNA7 1 CHRNA7 1 CHRNA7 "416592#1%""15q13.3 microdeletion syndrome"":1931488" 416592(1|Kidd(2008)) "416592(23|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "897(4|Wang(2008),Pang(2010),Levy(2007),Ahn(2009))" 3 352 - 0 "416592(82|Sebat(2004),Redon(2006),Wang(2007),Wang(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" IREV30826 1 145376198 145792051 415854 Gain 3 0.890344 536 777 chas 54.53 Gain 90.35 Gain 99.82 Gain GainGainGain 174 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.1 - "RNF115,GPR89A,RBM8A,GNRHR2,CD160,HFE2,ANKRD34A,LIX1L,POLR3GL,ANKRD35,ITGA10,PEX11B,NUDT17,TXNIP,PDZK1,POLR3C,PIAS3" 17 "RNF115,GPR89A,RBM8A,GNRHR2,CD160,HFE2,ANKRD34A,LIX1L,POLR3GL,ANKRD35,ITGA10,PEX11B,NUDT17,TXNIP,PDZK1,POLR3C,PIAS3" 17 HFE2 "390799#1%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871" - "415854(22|Wang(2007),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Park(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Tuzun(2005),Itsara(2009),Jakobsson(2008),Simon-Sanchez(2007),Cooper(2008))" 769(2|Matsuzaki(2009)) 17 174 GPR89A#asd_candidate 1 "415854(68|Teague(2010),Ahn(2009),Korbel(2007),Durbin(2010),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Tuzun(2005),Park(2010),Kidd(2008),Wilson(2010),Wong(2007),Jakobsson(2008),Cooper(2008),Perry(2008b),Pinto(2011),Redon(2006),Locke(2006),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401413RG male "research_filter, clinical_filter" TGHP62000 3 82094996 82510042 415047 Loss 1 0.91244 248 1680 chas 100 Loss 99.16 Loss 100 Loss LossLossLoss 221 NA NA NA "ChAS,IPN,NXS,PTK" 3p12.2 - - 0 - 0 - - 714(1|Ahn(2009)) "25167(6|Park(2010),McKernan(2009),Matsuzaki(2009))" 731(1|Conrad(2009)) - 221 - 0 "97219(37|Banerjee(2011),Ahn(2009),Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400882DD male "research_filter, clinical_filter" IZZO20602 22 16888900 17303481 414582 Gain 3 0.888752 177 2355 chas 81.75 Gain 100 Gain 100 Gain GainGainGain 154 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 - "414582#1%""Cat-Eye Syndrome (Type I)"":18591860" - "414582(44|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "1045(4|Park(2010),Levy(2007),Wheeler(2008),Perry(2008))" 92 154 - 0 "414582(103|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" SYHV89014 22 16888900 17303480 414581 Gain 4 0.951502 176 2369 chas 94.7 Gain 76.61 Gain 98.16 Gain GainGainGain 154 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 - "414581#1%""Cat-Eye Syndrome (Type I)"":18591860" - "414581(44|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "1045(4|Park(2010),Levy(2007),Wheeler(2008),Perry(2008))" 92 154 - 0 "414581(103|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" QVOH35939 15 85725149 86138964 413816 Gain 3 0.901797 336 1235 chas 68.33 Gain 79.08 Gain 99.99 Gain GainGainGain 234 NA NA NA "ChAS,IPN,NXS,PTK" 15q25.3 - AKAP13 1 AKAP13 1 - - - "413816(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pinto(2007),Park(2010),Itsara(2009),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "1075(4|Wang(2008),Shaikh(2009),Perry(2008))" 31 234 - 0 "413816(158|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Sharp(2005),Itsara(2009),McKernan(2009),Wang(2008),Durbin(2010),Locke(2006),Perry(2008b),Pinto(2011),Park(2010),Teague(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" XUEP99389 4 131944563 132358180 413618 Gain 3 0.898376 232 1790 chas 94.63 Gain 99.2 Gain 99.2 Gain GainGainGain 208 99.56 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "413618(10|Wang(2007),Redon(2006),Perry(2008),McKernan(2009),Pang(2010),Pinto(2007),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" "1072(6|Pang(2010),Conrad(2009),Levy(2007),Perry(2008),Mills(2006))" - 208 - 0 "413618(41|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Conrad(2009),Pinto(2007),Pinto(2011),Jakobsson(2008),Mills(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" UAYA68179 14 22558878 22970561 411684 Gain 3 0.88296 686 600 chas 0 - 75.52 Gain 97.36 Gain #NAME? 399 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "411684(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 399 - 0 "411684(159|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401729AC female "research_filter, clinical_filter" KEHV72339 Y 27040718 27452080 411363 Gain 2 0.845992 60 6972 chas 0.39 Gain 0 - 0 - Gain-- 29 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "411363#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "411363(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 29 - 0 "411363(9|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" AWAR79338 18 25257549 25668821 411273 Gain 3 0.904539 328 1257 chas 97.69 Gain 98.82 Gain 98.82 Gain GainGainGain 301 98.55 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q12.1 - CDH2 1 CDH2 1 - - - - "460(2|Park(2010),Levy(2007))" 0 301 - 0 "411273(14|Wong(2007),Levy(2007),Durbin(2010),Pang(2010),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" JORC32909 14 22560323 22971360 411038 Gain 3 0.878345 686 600 chas 0 - 86.01 Gain 100 Gain #NAME? 399 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "411038(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 399 - 0 "411038(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401086MD male "research_filter, clinical_filter" CWFZ39975 16 46464489 46874684 410196 Gain 3 0.900773 484 849 chas 65.52 Gain 99.27 Gain 100 Gain GainGainGain 154 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16q11.2 - "VPS35,SHCBP1,ORC6,MYLK3,C16orf87,ANKRD26P1" 6 "VPS35,SHCBP1,ORC6,MYLK3,C16orf87,ANKRD26P1" 6 "ORC6,VPS35" - - "36129(8|Conrad(2009),McKernan(2009),Korbel(2007),Cooper(2008),Matsuzaki(2009))" 163(1|Ahn(2009)) 13 154 - 0 "410196(65|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2008),McKernan(2009),Durbin(2010),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" ZKED26020 10 106332879 106742795 409917 Loss 1 0.927815 512 802 chas 99.92 Loss 99.93 Loss 100 Loss LossLossLoss 320 NA NA NA "ChAS,IPN,NXS,PTK" 10q25.1 - SORCS3 1 SORCS3 1 - - - 1306(1|McKernan(2009)) 198(1|Ahn(2009)) - 320 - 0 "273626(23|Ahn(2009),Wong(2007),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" UYAI76550 14 43826201 44234984 408784 Gain 3 0.899869 280 1465 chas 100 Gain 100 Gain 100 Gain GainGainGain 202 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "408784(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 202 - 0 "408784(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" DJYF53115 14 43826201 44234984 408784 Gain 3 0.888998 280 1465 chas 81 Gain 100 Gain 100 Gain GainGainGain 202 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "408784(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 202 - 0 "408784(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401184MM male "research_filter, clinical_filter" ASYD11505 14 43827402 44234984 407583 Gain 3 0.889108 276 1482 chas 93.66 Gain 100 Gain 100 Gain GainGainGain 199 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "407583(5|Itsara(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "381(2|Wang(2008),Bentley(2008))" - 199 - 0 "407583(42|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402024BB male "research_filter, clinical_filter" BLGS11062 14 22558878 22966418 407541 Loss 1 0.877037 664 614 chas 0 - 77.55 Loss 99.15 Loss #NAME? 382 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "407541(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 382 - 0 "407541(159|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401714BM female "research_filter, clinical_filter" VUUO47049 14 22570544 22977816 407273 Gain 3 0.878711 680 599 chas 0 - 83.42 Gain 100 Gain #NAME? 396 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "407273(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 396 - 0 "407273(160|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400533BB female "research_filter, clinical_filter" FEZX98083 14 106536991 106943509 406519 Gain 3 0.886983 119 3445 chas 60.76 Gain 39.87 Gain 0 - GainGain- 223 65.2 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 14q32.33 - "LINC00226,LINC00221" 2 "LINC00226,LINC00221" 2 - - 1174(1|Ahn(2009)) "406519(138|Sebat(2004),Shaikh(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Ahn(2009),Bentley(2008),Pang(2010),Itsara(2009),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Kidd(2008),Simon-Sanchez(2007),Mills(2006))" "6040(12|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 49 223 - 0 "406519(855|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" WYNE83745 15 23214984 23620154 405171 Gain 3 0.917353 56 7366 chas 84.79 "Loss,Gain" 30.19 "Gain,Loss" 29.7 Gain "Loss,GainGain,LossGain" 27 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,GOLGA8IP,HERC2P2,LOC653061,HERC2P7" 5 "GOLGA8E,GOLGA8IP,HERC2P2,LOC653061,HERC2P7" 5 - "405171#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "405171(53|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),McKernan(2009),Pang(2010),Pinto(2007),Cooper(2008),Redon(2006),Shaikh(2009),Zogopoulos(2007))" 1263(3|Perry(2008)) 88 27 - 0 "405171(142|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401844ZD male "research_filter, clinical_filter" VQFC85923 9 20256337 20660858 404522 Gain 3 0.867798 543 746 chas 9.72 Gain 55.15 Gain 97.63 Gain GainGainGain 305 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.3 - "MIR4473,KIAA1797,MIR4474,MLLT3" 4 "MIR4473,KIAA1797,MIR4474,MLLT3" 4 - - - "404522(5|Pang(2010),Wheeler(2008),McKernan(2009),Shaikh(2009))" - - 305 - 0 "87535(12|Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" VHGW31501 14 22570544 22974280 403737 Loss 1 0.864394 676 598 chas 0 - 46.62 Loss 99.06 Loss #NAME? 388 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "403737(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 388 - 0 "403737(159|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401819BS female "research_filter, clinical_filter" TTCB91135 14 22570544 22970223 399680 Loss 1 0.886264 664 602 chas 0 - 93.42 Loss 99.91 Loss #NAME? 377 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "399680(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 377 - 0 "399680(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401376RD male "research_filter, clinical_filter" LWHQ31793 22 16888900 17288220 399321 Gain 3 0.8751 175 2294 chas 20.22 Gain 64 Gain 99.41 Gain GainGainGain 152 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 - "399321#1%""Cat-Eye Syndrome (Type I)"":18591860" - "399321(44|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "1045(4|Park(2010),Levy(2007),Wheeler(2008),Perry(2008))" 96 152 - 0 "399321(103|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" RDPM47345 14 22560403 22959418 399016 Gain 3 0.870627 649 615 chas 0 - 28.55 Gain 100 Gain #NAME? 365 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 645(1|Ahn(2009)) "399016(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 365 - 0 "399016(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400554WB male "research_filter, clinical_filter" QRKX79081 14 22560403 22959362 398960 Gain 3 0.869491 648 616 chas 0 - 32.22 Gain 100 Gain #NAME? 364 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "398960(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 364 - 0 "398960(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400631SJ male "research_filter, clinical_filter" IREV30826 17 34425363 34822493 397131 Gain 3 0.882194 66 6109 chas 9.44 Gain 5.49 Gain 0 - GainGain- 76 NA NA NA "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,CCL4,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 9 "TBC1D3B,TBC1D3C,CCL4,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 9 CCL3L1 - 8166(1|Kidd(2008)) "397131(84|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 75 76 - 0 "397131(681|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401413RG male "research_filter, clinical_filter" DBZL89045 4 190419272 190816266 396995 Gain 3 0.907424 164 2435 chas 97.43 Gain 99.99 Gain 98.71 Gain GainGainGain 220 98.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q35.2 - - 0 - 0 - - "29143(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "396995(105|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Kim(2009),Shaikh(2009),Mills(2006))" "15020(71|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 24 220 - 0 "396995(364|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400032RC female "research_filter, clinical_filter" HEJH85210 4 190419272 190816266 396995 Gain 3 0.896046 164 2435 chas 82.34 Gain 61.09 Gain 98.71 Gain GainGainGain 220 NA NA NA "ChAS,IPN,NXS,PTK" 4q35.2 - - 0 - 0 - - "29143(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "396995(105|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Kim(2009),Shaikh(2009),Mills(2006))" "15020(71|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 24 220 - 0 "396995(364|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" VUCC31552 Y 27038224 27435154 396931 Gain 2 0.904742 52 7782 chas 53.12 Gain 0 - 0 - Gain-- 23 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "396931#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "396931(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "396931(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400109LJ male "research_filter, clinical_filter" WHSN55625 17 34440083 34836998 396916 Gain 3 0.877818 78 5154 chas 9.24 Gain 10.24 Gain 0 - GainGain- 77 11.34 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 22671(1|Kidd(2008)) "396916(81|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 72 77 - 0 "396916(656|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" CLWS25417 15 23290863 23687641 396779 Loss 1 0.890989 50 8097 chas 14.88 Loss 14.65 Loss 14.65 Loss LossLossLoss 24 7.43 Loss IP6 "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "396779#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "396779(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "2801(10|Wang(2008),Levy(2007),Ahn(2009),Perry(2008),Matsuzaki(2009))" 87 24 - 0 "396779(157|Teague(2010),Korbel(2007),Ju(2010),Wang(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401661HD male "research_filter, clinical_filter" RCQQ88896 22 16888900 17285557 396658 Gain 3 0.890639 172 2319 chas 73.11 Gain 86.85 Gain 58.95 Gain GainGainGain 148 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 - "396658#1%""Cat-Eye Syndrome (Type I)"":18591860" - "396658(44|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "1045(4|Park(2010),Levy(2007),Wheeler(2008),Perry(2008))" 96 148 - 0 "396658(102|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" SMGW17663 4 131961807 132358180 396374 Gain 3 0.896251 228 1746 chas 100 Gain 100 Gain 100 Gain GainGainGain 204 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "396374(10|Wang(2007),Redon(2006),Perry(2008),McKernan(2009),Pang(2010),Pinto(2007),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" "1072(6|Pang(2010),Conrad(2009),Levy(2007),Perry(2008),Mills(2006))" - 204 - 0 "396374(41|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Conrad(2009),Pinto(2007),Pinto(2011),Jakobsson(2008),Mills(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" SNEF27582 15 23286572 23682708 396137 Loss 1 0.89213 60 6714 chas 14.91 Loss 5.84 Loss 0 - LossLoss- 26 0 - - "ChAS,IPN,NXS" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "396137#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "396137(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 26 - 0 "396137(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 401831TW male "research_filter, clinical_filter" WCXF39029 Y 27040718 27436689 395972 Loss 0 0.903079 52 7764 chas 53.63 Loss 0 - 0 - Loss-- 23 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "395972#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "395972(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "395972(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400788PV male "research_filter, clinical_filter" LFVX88346 Y 27040718 27436689 395972 Gain 2 0.855819 52 7764 chas 9.65 Gain 0 - 0 - Gain-- 23 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "395972#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "395972(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "395972(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes NA 401694SG male "research_filter, clinical_filter" LNYN65073 Y 26526199 26921530 395332 Loss 0 0.905508 34 11979 chas 100 Loss 0 - 0 - Loss-- 47 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 11 "DAZ3,TTTY4,BPY2,TTTY17A,TTTY17B,TTTY17C,TTTY4C,TTTY4B,BPY2B,BPY2C,DAZ4" 11 - "395332#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "395332(9|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 47 - 0 "395332(8|Locke(2006),Sharp(2005),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 401924ST male "research_filter, clinical_filter" LNYN65073 Y 27040718 27435154 394437 Loss 0 0.893914 44 9172 chas 53.45 Loss 0 - 0 - Loss-- 23 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "394437#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "394437(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "394437(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 401924ST male "research_filter, clinical_filter" QYVK49015 Y 27040718 27435154 394437 Loss 0 0.886397 44 9172 chas 53.45 Loss 0 - 0 - Loss-- 23 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "394437#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "394437(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "394437(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" WFGA96432 14 22566186 22959362 393177 Gain 3 0.867583 640 615 chas 0 - 12.97 Gain 94.3 Gain #NAME? 353 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "393177(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 353 - 0 "393177(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401493HC male "research_filter, clinical_filter" XBAT84080 8 6651912 7044046 392135 Gain 3 0.910682 334 1177 chas 64.38 Gain 91.95 Gain 100 Gain GainGainGain 350 92.06 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.1 - "XKR5,LOC100652791,DEFB1,DEFA10P,DEFT1P2,DEFA6,DEFA5,DEFA4,DEFA3,DEFA1,DEFA1B,DEFT1P" 12 "XKR5,LOC100652791,DEFB1,DEFA10P,DEFT1P2,DEFA6,DEFA5,DEFA4,DEFA3,DEFA1,DEFA1B,DEFT1P" 12 - - "118500(2|Giglio(2002),Ahn(2009))" "392135(44|Sebat(2004),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Ahn(2009),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Park(2010),Ju(2010),Simon-Sanchez(2007))" "3383(11|Ahn(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),McCarroll(2005),Wheeler(2008),Mills(2006))" 41 350 - 0 "392135(208|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400186WC female "research_filter, clinical_filter" LMDJ78561 15 23290787 23682708 391922 Loss 1 0.897547 52 7684 chas 99.11 Loss 14.74 Loss 14.74 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "391922#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "391922(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 25 - 0 "391922(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" ERUW26412 15 23290863 23682708 391846 Loss 1 0.906736 48 8337 chas 15.07 Loss 13.84 "Gain,Loss" 16.12 "Gain,Loss" "LossGain,LossGain,Loss" 24 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "391846#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "391846(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 24 - 0 "391846(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" SBJN54268 15 23290863 23682708 391846 Loss 1 0.88643 48 8337 chas 95.61 Loss 12.82 Loss 0 - LossLoss- 24 NA NA NA "ChAS,IPN,NXS" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "391846#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "391846(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 24 - 0 "391846(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" MLXC26947 15 23290863 23682708 391846 Loss 1 0.888309 48 8337 chas 14.07 Loss 14.7 Loss 0 - LossLoss- 24 NA NA NA "ChAS,IPN,NXS" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "391846#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "391846(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 24 - 0 "391846(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" YPKU53656 16 32511179 32902046 390868 Gain 3 0.882962 57 6979 chas 79 Gain 25.39 Gain 100 Gain GainGainGain 80 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 - - 323941(1|Kidd(2008)) "390868(54|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" "2011(3|Ahn(2009),Perry(2008))" 76 80 - 0 "390868(308|Sebat(2004),Korbel(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402022SM female "research_filter, clinical_filter" FNEG58263 Y 27040718 27431088 390371 Loss 0 0.913028 40 10009 chas 52.97 Loss 0 - 0 - Loss-- 23 0 - - "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "390371#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "390371(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "390371(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400836LK male "research_filter, clinical_filter" MECH38806 Y 27040718 27431088 390371 Loss 0 0.916071 40 10009 chas 52.97 Loss 0 - 0 - Loss-- 23 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 "DAZ3,DAZ2,TTTY17C,TTTY4,BPY2,TTTY17A,TTTY17B,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 12 - "390371#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "390371(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "390371(8|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" UAZI16039 15 23286572 23676512 389941 Loss 1 0.903969 56 7089 chas 96.72 Loss 12.32 Loss 14.68 Loss LossLossLoss 24 8.98 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "389941#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "389941(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 24 - 0 "389941(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400625FT male "research_filter, clinical_filter" HXSU46589 14 22580773 22970223 389451 Loss 1 0.887258 640 609 chas 0 - 91.51 Loss 95.81 Loss #NAME? 360 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "389451(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 360 - 0 "389451(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401299ST female "research_filter, clinical_filter" KSNB36135 14 22580623 22969566 388944 Gain 3 0.865357 638 610 chas 0 - 9.58 Gain 0 - -Gain- 359 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "388944(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 359 - 0 "388944(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401677MM female "research_filter, clinical_filter" YCEN33630 14 22586012 22974280 388269 Gain 3 0.87754 644 603 chas 0 - 66.39 Gain 97.08 Gain #NAME? 368 92.09 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "388269(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 368 - 0 "388269(152|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" UAZI16039 17 713368 1101339 387972 Loss 1 0.909619 374 1040 chas 92.6 Loss 100 Loss 100 Loss LossLossLoss 186 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p13.3 - "ABR,NXN,MIR3183,TIMM22" 4 "ABR,NXN,MIR3183,TIMM22" 4 - "387972#1%""Miller-Dieker syndrome (MDS)"":2545429" - "387972(62|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Redon(2006),Wheeler(2008),Ju(2010),Shaikh(2009))" "14155(67|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 2 186 - 0 "387972(320|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400625FT male "research_filter, clinical_filter" CAEK98371 15 23290787 23676512 385726 Loss 1 0.885409 48 8206 chas 14.29 Loss 14.97 Loss 0 - LossLoss- 23 9.08 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "385726#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "385726(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 23 - 0 "385726(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" ISVP82924 14 22573650 22959362 385713 Gain 3 0.872265 629 614 chas 0 - 35.96 Gain 72.82 Gain #NAME? 345 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "385713(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 345 - 0 "385713(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401400NP male "research_filter, clinical_filter" WVAB12930 15 23290863 23676512 385650 Loss 1 0.88278 44 8968 chas 14.29 Loss 15.43 Loss 14.98 Loss LossLossLoss 22 7.64 Loss IP6 "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "385650#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "385650(55|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Shaikh(2009))" "1434(4|Ahn(2009),Perry(2008))" 87 22 - 0 "385650(153|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Itsara(2009),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400655WB female "research_filter, clinical_filter" PGEB85888 2 97733013 98118115 385103 Loss 1 0.881938 64 6112 chas 2.22 Loss 64.04 Loss 79.64 Loss LossLossLoss 87 NA NA NA "ChAS,IPN,NXS,PTK" 2q11.2 - "FAHD2B,ANKRD36,LOC100506123" 3 "FAHD2B,ANKRD36,LOC100506123" 3 - - - "385103(32|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009),Mills(2006))" "1867(3|Pang(2010),Perry(2008))" 95 87 - 0 "385103(161|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Wang(2008),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Itsara(2009),Pinto(2011),Jakobsson(2008),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" GQSZ37539 14 22581438 22966418 384981 Loss 1 0.87764 620 621 chas 0 - 75.24 Loss 81 Loss #NAME? 348 60.16 Loss "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "384981(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 348 - 0 "384981(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" PCGN60952 14 22581438 22966418 384981 Gain 3 0.876807 620 621 chas 0 - 73.22 Gain 100 Gain #NAME? 348 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "384981(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 348 - 0 "384981(158|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401364GM male "research_filter, clinical_filter" YBSU20689 7 111178450 111562163 383714 Gain 3 0.900086 336 1145 chas 100 Gain 99.9 Gain 100 Gain GainGainGain 223 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.1 - "IMMP2L,DOCK4" 2 "IMMP2L,DOCK4" 2 - - - "158134(13|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009))" "785(5|Conrad(2009),Matsuzaki(2009))" - 223 - 0 "248332(30|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Campbell(2011),Park(2010),Jakobsson(2008),Teague(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" PNEQ37885 12 37875132 38258635 383504 Gain 3 0.884884 91 4261 chas 68 Gain 89.82 Gain 0 - GainGain- 96 NA NA NA "ChAS,IPN,NXS" "12q11,12q12" - - 0 - 0 - - - "383504(37|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Ahn(2009),Matsuzaki(2009),Park(2010),Pinto(2007),Ju(2010),Cooper(2008),Altshuler(2010),McCarroll(2005),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "776(2|Levy(2007),Ahn(2009))" 30 96 - 0 "383504(138|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Pinto(2007),Shaikh(2009),Conrad(2006),McCarroll(2008),Teague(2010),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" FXTM73808 17 34440083 34823294 383212 Gain 3 0.896512 64 6082 chas 9.76 Gain 11.27 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 8967(1|Kidd(2008)) "383212(81|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 75 61 - 0 "383212(656|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401030GI female "research_filter, clinical_filter" RWTQ90156 17 34440083 34823204 383122 Gain 3 0.883597 63 6179 chas 9.58 Gain 12.4 Gain 0 - GainGain- 61 11.75 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 8877(1|Kidd(2008)) "383122(81|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 75 61 - 0 "383122(656|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" NQBM70678 17 34440083 34823204 383122 Gain 3 0.896302 63 6179 chas 9.76 Gain 5.73 Gain 0 - GainGain- 61 11.75 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 8877(1|Kidd(2008)) "383122(81|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 75 61 - 0 "383122(656|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400084DM female "research_filter, clinical_filter" HAGL80690 17 34440083 34823204 383122 Gain 3 0.88545 63 6179 chas 9.76 Gain 0 - 0 - Gain-- 61 11.75 Gain "BS,IP6" "ChAS,IPN" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 8877(1|Kidd(2008)) "383122(81|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "960(3|Park(2010),Wheeler(2008),Matsuzaki(2009))" 75 61 - 0 "383122(656|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" PVOR72227 14 22578242 22959555 381314 Loss 1 0.864415 620 616 chas 0 - 43.43 Loss 82.85 Loss #NAME? 341 85.97 Loss GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "381314(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 341 - 0 "381314(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" PEZC72297 14 22578242 22959362 381121 Gain 3 0.872619 616 619 chas 0 - 85.81 Gain 100 Gain #NAME? 338 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "381121(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 338 - 0 "381121(154|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" OBWN97941 1 25307686 25687575 379890 Gain 3 0.891061 248 1538 chas 51.04 Gain 100 Gain 100 Gain GainGainGain 268 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p36.11 - "C1orf63,SYF2,RHD,TMEM50A" 4 "C1orf63,SYF2,RHD,TMEM50A" 4 RHD - 95789(2|Kidd(2008)) "152978(28|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Tuzun(2005),Park(2010),Wheeler(2008),Ju(2010),Kim(2009))" "565(3|Hinds(2005),Matsuzaki(2009))" 21 266 - 0 "329671(167|Ju(2010),Redon(2006),Conrad(2009),Tuzun(2005),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Wang(2007),McKernan(2009),Hinds(2006),Cooper(2008),Campbell(2011),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" RLVK87046 Y 28420329 28799937 379609 Loss 0 0.886906 177 2156 chas 100 Loss 0 - 0 - Loss-- 203 NA NA NA "ChAS,IPN" Yq11.23 - - 0 - 0 - - - "343438(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" "634(2|Levy(2007),Matsuzaki(2009))" 93 203 - 0 "328250(47|Locke(2006),Ahn(2009),McCarroll(2008),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" RVIS81666 14 22581438 22960757 379320 Loss 1 0.863601 616 616 chas 0 - 0 - 69.64 Loss #NAME? 339 0 - - "ChAS,PTK" 14q11.2 - - 0 - 0 - - 1984(1|Ahn(2009)) "379320(29|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 339 - 0 "379320(157|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401852SK male "research_filter, clinical_filter" FNSQ39400 7 110125792 110504992 379201 Gain 3 0.900541 348 1092 chas 98.9 Gain 99.37 Gain 99.37 Gain GainGainGain 305 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.1 - IMMP2L 1 IMMP2L 1 - - - "83843(32|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),McKernan(2009),Altshuler(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009))" 766(1|Conrad(2009)) - 305 - 0 "250269(113|Ju(2010),Korbel(2007),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Campbell(2011),Park(2010),Pinto(2011),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" WKAY66815 14 22591821 22970223 378403 Gain 3 0.867772 628 603 chas 0 - 19.08 Gain 97.66 Gain #NAME? 351 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "378403(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 351 - 0 "378403(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400681MC female "research_filter, clinical_filter" AEJP39672 14 22591821 22970223 378403 Gain 3 0.870439 628 603 chas 0 - 67.35 Gain 95.7 Gain #NAME? 351 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "378403(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 351 - 0 "378403(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401234MB male "research_filter, clinical_filter" HUDD82297 2 98442423 98819919 377497 Gain 3 0.896662 336 1126 chas 85.82 Gain 99.98 Gain 99.98 Gain GainGainGain 187 97.29 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q11.2 - "TMEM131,VWA3B" 2 "TMEM131,VWA3B" 2 - - - "4664(3|Conrad(2009),McKernan(2009),Matsuzaki(2009))" 1(1|Levy(2007)) 0 187 - 0 "377497(31|Conrad(2009),Wong(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400782IE male "research_filter, clinical_filter" OVRI44012 11 134348704 134725897 377194 Gain 3 0.905552 462 818 chas 83.68 Gain 100 Gain 98.45 Gain GainGainGain 362 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "377194(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "7308(39|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 362 - 0 "377194(197|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400083TG male "research_filter, clinical_filter" GDLU88739 14 22591821 22968854 377034 Loss 1 0.859683 618 611 chas 0 - 8.53 Loss 100 Loss #NAME? 345 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "377034(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 345 - 0 "377034(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400268SY female "research_filter, clinical_filter" XREB60973 2 97900967 98277102 376136 Gain 3 0.886885 95 4001 chas 3.25 Gain 97.85 Gain 97.85 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 2q11.2 - "ANKRD36,ACTR1B,ANKRD36B,LOC100506123,COX5B" 5 "ANKRD36,ACTR1B,ANKRD36B,LOC100506123,COX5B" 5 - - - "373561(29|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009))" "2086(4|Conrad(2009),Perry(2008))" 92 63 - 0 "376136(122|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),McCarroll(2008),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" AXJJ81139 14 22591821 22966744 374924 Gain 3 0.864564 616 609 chas 0 - 47.12 Gain 92.86 Gain #NAME? 343 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "374924(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 343 - 0 "374924(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400432VA male "research_filter, clinical_filter" DHFF12670 14 22591821 22966744 374924 Loss 1 0.865042 616 609 chas 0 - 39.77 Loss 93.43 Loss #NAME? 343 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "374924(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 343 - 0 "374924(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401252AE male "research_filter, clinical_filter" ETUR65669 16 32524765 32899412 374648 Gain 3 0.888572 48 7971 chas 0 - 0 - 0 - --- 77 NA NA NA ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 - - 310355(1|Kidd(2008)) "374648(53|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 77 - 0 "374648(300|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401056TJ male - BHQW11777 8 103213187 103586832 373646 Gain 3 0.89956 308 1217 chas 100 Gain 99.61 Gain 99.61 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" 8q22.3 - "ODF1,RRM2B,UBR5" 3 "ODF1,RRM2B,UBR5" 3 RRM2B - 1315(1|McKernan(2009)) "228266(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" "950(2|Conrad(2009),Matsuzaki(2009))" 0 178 - 0 "314366(27|Conrad(2009),Wong(2007),McKernan(2009),Durbin(2010),Kidd(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" HEJH85210 22 16888900 17262473 373574 Gain 3 0.892752 152 2474 chas 93.73 Gain 100 Gain 97.94 Gain GainGainGain 135 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,CCT8L2,ANKRD62P1-PARP4P3" 3 "psiTPTE22,CCT8L2,ANKRD62P1-PARP4P3" 3 - "373574#1%""Cat-Eye Syndrome (Type I)"":18591860" - "373574(44|Itsara(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Ju(2010),Simon-Sanchez(2007),Zogopoulos(2007))" "587(3|Levy(2007),Wheeler(2008),Perry(2008))" 98 135 - 0 "373574(99|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" GUWW37548 17 34450351 34822466 372116 Gain 3 0.889742 45 8457 chas 7.29 Gain 6.93 Gain 0 - GainGain- 46 9.34 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 50001(1|contig) "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 "TBC1D3B,TBC1D3C,TBC1D3G,TBC1D3H,CCL4L1,CCL4L2,CCL3L3,CCL3L1" 8 CCL3L1 - 8139(1|Kidd(2008)) "372116(79|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "167(2|Wheeler(2008),Matsuzaki(2009))" 77 46 - 0 "372116(650|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401195PN male research_filter TCTA60809 11 134347921 134719852 371932 Gain 3 0.895929 462 806 chas 84.52 Gain 91.88 Gain 99.89 Gain GainGainGain 364 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "371932(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 364 - 0 "371932(192|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401965TG female "research_filter, clinical_filter" IJPA28382 14 22594507 22966418 371912 Loss 1 0.878563 608 612 chas 0 - 58.03 Loss 100 Loss #NAME? 336 100 Loss "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "371912(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 336 - 0 "371912(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400103BN female "research_filter, clinical_filter" UXJM82913 14 22598597 22970492 371896 Loss 1 0.876522 624 596 chas 0 - 64.52 Loss 96.32 Loss #NAME? 349 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "371896(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 349 - 0 "371896(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" BQMP83404 11 134348704 134719852 371149 Gain 3 0.898933 460 808 chas 99.94 Gain 99.97 Gain 100 Gain GainGainGain 362 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "371149(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 362 - 0 "371149(192|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400474GF female "research_filter, clinical_filter" OSBA52088 11 134348704 134719852 371149 Gain 3 0.901821 460 808 chas 97.89 Gain 100 Gain 100 Gain GainGainGain 362 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "371149(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 362 - 0 "371149(192|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401617KM female "research_filter, clinical_filter" WMOD47474 11 134348704 134719852 371149 Gain 3 0.908424 460 808 chas 99.37 Gain 99.58 "Gain,Loss" 100 Gain "GainGain,LossGain" 362 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "371149(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 362 - 0 "371149(192|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" QKZI23426 14 22573443 22944507 371065 Gain 3 0.87447 626 593 chas 0 - 65.75 Gain 98.98 Gain #NAME? 337 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "371065(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 337 - 0 "371065(151|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400943DV female "research_filter, clinical_filter" KWYE93203 14 22599356 22970223 370868 Loss 1 0.879139 616 603 chas 0 - 86.43 Loss 99.68 Loss #NAME? 342 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "370868(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 342 - 0 "370868(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401357MH male "research_filter, clinical_filter" RDBP35321 2 96341465 96712140 370676 Gain 3 0.898776 128 2918 chas 47.84 Gain 66.32 Gain 100 Gain GainGainGain 98 NA NA NA "ChAS,IPN,NXS,PTK" 2q11.1 - "LOC729234,GPAT2" 2 "LOC729234,GPAT2" 2 - - "271576(2|Kidd(2008),Tuzun(2005))" "289335(17|Wang(2007),Ju(2010),Perry(2008),Conrad(2009),Bentley(2008),Pang(2010),Kidd(2008))" 527(1|Levy(2007)) 97 98 - 0 "370676(99|Conrad(2009),Wong(2007),Ju(2010),Perry(2008),Kidd(2010b),Wang(2008),Levy(2007),Wang(2007),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Pinto(2011),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" RMNM29531 11 134348704 134719069 370366 Gain 3 0.903568 456 813 chas 95.96 Gain 99.94 Gain 99.96 Gain GainGainGain 361 99.94 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "370366(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 361 - 0 "370366(191|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" XKMM87171 11 134348704 134719069 370366 Gain 3 0.895381 456 813 chas 68.6 Gain 97.46 Gain 99.96 Gain GainGainGain 361 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "370366(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 361 - 0 "370366(191|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400634MP male "research_filter, clinical_filter" IDVO19613 11 134348704 134719069 370366 Gain 3 0.897805 456 813 chas 67.22 Gain 73.05 Gain 99.96 Gain GainGainGain 361 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "370366(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 361 - 0 "370366(191|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401434VN female "research_filter, clinical_filter" TGEC92715 11 134348704 134719069 370366 Gain 3 0.905365 456 813 chas 92.13 Gain 90.95 Gain 100 Gain GainGainGain 361 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "370366(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 361 - 0 "370366(191|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 4000046CJ female "research_filter, clinical_filter" PAFA79672 11 134348704 134719069 370366 Gain 3 0.914147 456 813 chas 99.58 Gain 99.97 Gain 100 Gain GainGainGain 361 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - LOC283177 1 LOC283177 1 - - - "370366(71|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "6717(35|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 361 - 0 "370366(191|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 402033WD male "research_filter, clinical_filter" JHGL98054 16 21576803 21946045 369243 Gain 3 0.90584 184 2017 chas 94.85 Gain 80.53 Gain 85.39 Gain GainGainGain 127 NA NA NA "ChAS,IPN,NXS,PTK" 16p12.2 - "METTL9,IGSF6,RRN3P1,OTOA" 4 "METTL9,IGSF6,RRN3P1,OTOA" 4 OTOA "332090#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" "368231(6|Pang(2010),Kidd(2008),Korbel(2007),Tuzun(2005))" "369243(36|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),Jakobsson(2008),McKernan(2009),McCarroll(2008),Kim(2009),Zogopoulos(2007))" "1063(2|Conrad(2009),Perry(2008))" 56 127 - 0 "369243(204|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" SXXB40252 14 22591821 22960757 368937 Gain 3 0.869327 608 607 chas 0 - 3.71 Gain 0 - -Gain- 332 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 1984(1|Ahn(2009)) "368937(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 332 - 0 "368937(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401495NR male "research_filter, clinical_filter" WDRZ91881 14 22601780 22970492 368713 Loss 1 0.872662 616 599 chas 0 - 45.91 Loss 85.66 Loss #NAME? 346 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "368713(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 346 - 0 "368713(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401426WD male "research_filter, clinical_filter" ABMS89106 14 22591821 22959555 367735 Gain 3 0.868318 604 609 chas 0 - 44.02 Gain 0 - -Gain- 328 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "367735(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 328 - 0 "367735(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401674DD male "research_filter, clinical_filter" HAAE15834 16 32511179 32878155 366977 Loss 1 0.893254 38 9918 chas 0 - 23.96 Loss 18.74 Loss #NAME? 73 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 323941(1|Kidd(2008)) "366977(53|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" "2011(3|Ahn(2009),Perry(2008))" 74 73 - 0 "366977(287|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401899MB male "research_filter, clinical_filter" GVYY53861 16 32511179 32878155 366977 Loss 1 0.870943 38 9918 chas 0 - 0 - 0 - --- 73 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 323941(1|Kidd(2008)) "366977(53|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" "2011(3|Ahn(2009),Perry(2008))" 74 73 - 0 "366977(287|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401214BJ male clinical_filter MJBR37071 14 22578242 22944507 366266 Gain 3 0.873766 612 599 chas 0 - 76.02 Gain 78.18 Gain #NAME? 329 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "366266(28|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 329 - 0 "366266(151|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400570RW male "research_filter, clinical_filter" VXMJ58338 6 100278356 100643678 365323 Gain 3 0.894052 240 1528 chas 99.72 Gain 99.86 Gain 99.86 Gain GainGainGain 203 NA NA NA "ChAS,IPN,NXS,PTK" "6q16.2,6q16.3" - "MCHR2,LOC728012" 2 "MCHR2,LOC728012" 2 - - - "365323(2|McKernan(2009),Pinto(2007))" "644(2|Park(2010),Levy(2007))" 0 203 - 0 "334718(32|Teague(2010),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" CORE80412 14 22594507 22959362 364856 Gain 3 0.871368 596 613 chas 0 - 22.86 Gain 98.86 Gain #NAME? 320 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "364856(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 320 - 0 "364856(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400581VJ female "research_filter, clinical_filter" ZQHJ50767 11 55453563 55818281 364719 Gain 3 0.909362 508 719 chas 98.05 Gain 99.02 Gain 99.02 Gain GainGainGain 277 98.05 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "11q11,11q12.1" - "OR10AG1,OR5I1,OR5L1,OR5L2,OR5F1,OR5D18,SPRYD5,OR7E5P,OR5D13,OR5AS1,OR5D14,OR5W2,OR5D16" 13 "OR10AG1,OR5I1,OR5L1,OR5L2,OR5F1,OR5D18,SPRYD5,OR7E5P,OR5D13,OR5AS1,OR5D14,OR5W2,OR5D16" 13 - - 41761(1|Kidd(2008)) "364719(58|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Young(2008),McKernan(2009),Matsuzaki(2009),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Tuzun(2005),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Mills(2006))" 767(2|Matsuzaki(2009)) 10 276 - 0 "364719(169|Sebat(2004),Redon(2006),Wang(2007),Campbell(2011),Pinto(2007),Tuzun(2005),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" JTJC66263 14 22573443 22937656 364214 Gain 3 0.864535 594 614 chas 0 - 20.67 Gain 68.61 Gain #NAME? 320 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "364214(27|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2278(17|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 320 - 0 "364214(146|Sebat(2004),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400122PL male "research_filter, clinical_filter" FNMA81925 14 22598597 22960819 362223 Loss 1 0.87429 602 602 chas 0 - 21.43 Loss 99.43 Loss #NAME? 326 78.99 Loss GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2046(1|Ahn(2009)) "362223(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 326 - 0 "362223(148|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400171BJ male "research_filter, clinical_filter" TUPR75049 5 101368718 101730438 361721 Gain 3 0.891474 272 1334 chas 99.75 Gain 99.88 Gain 99.87 Gain GainGainGain 210 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - "SLCO4C1,SLCO6A1" 2 "SLCO4C1,SLCO6A1" 2 - - - "38552(3|Park(2010),Matsuzaki(2009),Shaikh(2009))" - 0 210 - 0 "265264(29|Banerjee(2011),Wong(2007),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2008),Wilson(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" YMNO36133 14 22598597 22959555 360959 Loss 1 0.867546 596 606 chas 0 - 48.45 Loss 86.03 Loss #NAME? 321 100 Loss "GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "360959(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 321 - 0 "360959(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" KAAS48951 14 22598597 22959555 360959 Gain 3 0.870168 596 606 chas 0 - 56.17 Gain 99.77 Gain #NAME? 321 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "360959(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 321 - 0 "360959(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401504RJ male "research_filter, clinical_filter" XCWR96625 14 22598597 22959555 360959 Gain 3 0.874188 596 606 chas 0 - 70.85 Gain 100 Gain #NAME? 321 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "360959(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 321 - 0 "360959(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400158FB male "research_filter, clinical_filter" YDUL84017 6 78767422 79128355 360934 Gain 3 0.915757 246 1473 chas 100 Gain 100 Gain 100 Gain GainGainGain 348 99.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "264786(88|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" "964(3|Levy(2007),Conrad(2005),Perry(2008))" - 348 - 0 "360934(906|Teague(2010),Redon(2006),Ju(2010),Campbell(2011),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" GLGF34868 14 22598597 22959362 360766 Gain 3 0.873626 592 610 chas 0 - 33.84 Gain 99.79 Gain #NAME? 318 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "360766(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 318 - 0 "360766(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401268PS male "research_filter, clinical_filter" INSC49339 7 89526442 89885423 358982 Gain 3 0.901977 322 1118 chas 86.29 Gain 100 Gain 100 Gain GainGainGain 285 NA NA NA "ChAS,IPN,NXS,PTK" 7q21.13 - "DPY19L2P4,STEAP1,STEAP2,C7orf63" 4 "DPY19L2P4,STEAP1,STEAP2,C7orf63" 4 - - - "358982(35|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Ju(2010),Kim(2009),Simon-Sanchez(2007))" "3356(20|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 18 285 - 0 "358982(141|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" DMKI43381 14 22611467 22970223 358757 Gain 3 0.866561 592 607 chas 0 - 6.29 Gain 98.84 Gain #NAME? 327 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "358757(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 327 - 0 "358757(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400763BT female "research_filter, clinical_filter" QXAY99372 14 22586012 22944507 358496 Gain 3 0.86899 600 598 chas 0 - 73.82 Gain 99.1 Gain #NAME? 322 99.96 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "358496(27|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 322 - 0 "358496(144|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400040CN male "research_filter, clinical_filter" VVRJ19010 14 22611467 22969566 358100 Gain 3 0.873669 588 610 chas 0 - 82.47 Gain 100 Gain #NAME? 324 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "358100(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 324 - 0 "358100(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401535RJ male "research_filter, clinical_filter" TUOI10912 14 22616043 22974116 358074 Loss 1 0.868869 594 603 chas 0 - 0 - 0 - --- 325 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "358074(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 325 - 0 "358074(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401792KR male clinical_filter ZQFY18932 14 106560963 106918044 357082 Loss 1 0.894711 96 3758 chas 0 - 43.56 Loss 68.84 Loss #NAME? 196 NA NA NA "ChAS,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - 1174(1|Ahn(2009)) "357082(110|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "4979(9|Conrad(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Pang(2010),Park(2010))" 53 195 - 0 "357082(736|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400341GL female "research_filter, clinical_filter" HARD47518 22 33854815 34211592 356778 Loss 1 0.91726 880 405 chas 99.37 Loss 99.63 Loss 99.63 Loss LossLossLoss 392 NA NA NA "ChAS,IPN,NXS,PTK" 22q12.3 - "LARGE,LOC100506195" 2 "LARGE,LOC100506195" 2 LARGE - - "82669(3|Park(2010),Pinto(2007),Shaikh(2009))" "598(7|Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" - 392 - 0 "185530(27|Itsara(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" ZJYL67451 22 49729748 50086405 356658 Gain 3 0.904768 268 1335 chas 98.86 Gain 99.65 Gain 99.65 Gain GainGainGain 307 99.25 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q13.33 - C22orf34 1 C22orf34 1 - - - "106280(12|Conrad(2009),Ahn(2009),Itsara(2009),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Shaikh(2009))" "3927(19|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Mills(2006))" 1 307 - 0 "229255(108|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401025SM male "research_filter, clinical_filter" GDLU88739 22 49729347 50085731 356385 Gain 3 0.897204 269 1329 chas 77.25 Gain 96.84 Gain 99.63 Gain GainGainGain 307 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.33 - C22orf34 1 C22orf34 1 - - - "106280(12|Conrad(2009),Ahn(2009),Itsara(2009),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Shaikh(2009))" "3927(19|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Mills(2006))" 1 307 - 0 "228982(108|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" MTFT89424 22 18648867 19004736 355870 Gain 3 0.907827 53 6843 chas 9.6 Gain 83.27 Gain 93.55 Gain GainGainGain 117 76.38 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,USP18,DGCR5,GGT3P,DGCR6" 5 "PRODH,USP18,DGCR5,GGT3P,DGCR6" 5 PRODH "355870#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "355870(48|Conrad(2009),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1173(3|Conrad(2009),Ahn(2009))" 87 117 - 0 "355870(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" YMBI36841 22 18649190 19004731 355542 Gain 3 0.899508 50 7255 chas 24.72 Gain 19.98 Gain 35.8 Gain GainGainGain 116 54.74 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,USP18,DGCR5,GGT3P,DGCR6" 5 "PRODH,USP18,DGCR5,GGT3P,DGCR6" 5 PRODH "355542#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "355542(48|Conrad(2009),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1173(3|Conrad(2009),Ahn(2009))" 87 116 - 0 "355542(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401321CE female "research_filter, clinical_filter" ICCB48361 14 22611467 22966418 354952 Gain 3 0.882605 576 617 chas 0 - 98.39 Gain 99.02 Gain #NAME? 317 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "354952(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 317 - 0 "354952(149|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401258PC female "research_filter, clinical_filter" UBGH15538 5 37387581 37742414 354834 Gain 3 0.887338 338 1052 chas 90.13 Gain 96.33 Gain 98.29 Gain GainGainGain 165 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.2 - WDR70 1 WDR70 1 - - - "10152(3|Conrad(2009),McKernan(2009),Kim(2009))" - 13 165 - 0 "164270(18|Conrad(2009),Jakobsson(2008),McKernan(2009),Durbin(2010),Kim(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" LHPN45961 14 22616043 22970492 354450 Loss 1 0.874752 588 603 chas 0 - 64.89 Loss 91.56 Loss #NAME? 320 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "354450(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 320 - 0 "354450(148|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400603CJ male "research_filter, clinical_filter" JFDL89779 14 22641623 22995788 354166 Loss 1 0.865032 538 659 chas 0 - 44.41 Loss 0 - -Loss- 318 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "354166(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 318 - 0 "354166(150|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401526WB male "research_filter, clinical_filter" VZJA70154 2 130804103 131157859 353757 Loss 1 0.90486 206 1725 chas 71.14 Loss 66.38 Loss 100 Loss LossLossLoss 113 96.73 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q21.1 - "LOC285103,PTPN18,TUBA3E,IMP4,CCDC74B,CCDC115,SMPD4,MZT2B,POTEF,LOC440905" 10 "LOC285103,PTPN18,TUBA3E,IMP4,CCDC74B,CCDC115,SMPD4,MZT2B,POTEF,LOC440905" 10 - - - "353757(20|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Itsara(2009),Conrad(2009),Pinto(2007),McCarroll(2008))" 1468(2|Perry(2008)) 64 113 - 0 "353757(78|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Wang(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401427CB male "research_filter, clinical_filter" RDBP35321 16 32524716 32878155 353440 Gain 3 0.88889 37 9817 chas 0 - 0 - 0 - --- 72 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310404(1|Kidd(2008)) "353440(52|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 77 72 - 0 "353440(280|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400773GS male - APBT44417 14 22607365 22959555 352191 Gain 3 0.867974 576 612 chas 0 - 27.79 Gain 99.97 Gain #NAME? 308 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "352191(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 308 - 0 "352191(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400701MM female "research_filter, clinical_filter" SEZK29585 8 76610056 76961841 351786 Loss 1 0.920205 215 1643 chas 96.85 Loss 94.49 Loss 94.49 Loss LossLossLoss 198 NA NA NA "ChAS,IPN,NXS,PTK" 8q21.11 - - 0 - 0 - - - 207611(1|de Smith(2007)) - - 198 - 0 "320092(15|Wong(2007),Durbin(2010),Bentley(2008),Kidd(2008),De(Smith_2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" OBAS32636 16 32554226 32905712 351487 Gain 3 0.880607 56 6390 chas 0 - 0 - 0 - --- 77 0 - - ChAS 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 - - 280894(1|Kidd(2008)) "351487(50|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 85 77 - 0 "351487(274|Sebat(2004),Korbel(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400249BC female clinical_filter TOTG24684 19 52271309 52620593 349285 Gain 3 0.905992 380 921 chas 79.51 Gain 97.81 Gain 97.81 Gain GainGainGain 219 95.6 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.41 - "ZNF613,ZNF615,ZNF614,ZNF616,ZNF841,FPR2,FPR3,ZNF432,ZNF350,ZNF649,ZNF577" 11 "ZNF613,ZNF615,ZNF614,ZNF616,ZNF841,FPR2,FPR3,ZNF432,ZNF350,ZNF649,ZNF577" 11 - - - "349285(4|Itsara(2009),Pinto(2007),Redon(2006),Zogopoulos(2007))" 125(1|Bentley(2008)) 1 218 - 0 "349285(16|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" LTTD14271 16 32554242 32902151 347910 Gain 3 0.877047 52 6821 chas 0 - 84.15 Gain 0 - -Gain- 76 75.18 Gain GTC "ChAS,NXS" 16p11.2 - "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 "SLC6A10P,LOC653550,TP53TG3B,TP53TG3" 4 - - 280878(1|Kidd(2008)) "347910(50|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 85 75 - 0 "347910(274|Sebat(2004),Korbel(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" CVWU93815 14 22612288 22959362 347075 Loss 1 0.867214 560 620 chas 0 - 77.68 Loss 100 Loss #NAME? 295 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "347075(26|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 295 - 0 "347075(145|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401253MC female "research_filter, clinical_filter" UAYA68179 4 89947215 90293893 346679 Loss 1 0.911482 363 957 chas 99.87 Loss 99.94 Loss 100 Loss LossLossLoss 286 NA NA NA "ChAS,IPN,NXS,PTK" 4q22.1 - "TIGD2,GPRIN3,FAM13A" 3 "TIGD2,GPRIN3,FAM13A" 3 - - - "346679(3|Park(2010),Conrad(2009),Jakobsson(2008))" "1539(5|Park(2010),Levy(2007),Kim(2009),Conrad(2005),Mills(2006))" - 286 - 0 "346679(24|Conrad(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),Pinto(2011),Park(2010),Kim(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401729AC female "research_filter, clinical_filter" WMCV84375 3 163124896 163470210 345315 Loss 1 0.922602 188 1846 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 170 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "345315(3|de Smith(2007),McKernan(2009),Pinto(2007))" "911(7|Wang(2008),Levy(2007),Bentley(2008),Ahn(2009),Mills(2006))" - 170 - 0 "345315(49|Teague(2010),Ahn(2009),Wong(2007),Jakobsson(2008),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401249TP female "research_filter, clinical_filter" FSGH36026 17 19144144 19488581 344438 Loss 1 0.917558 352 981 chas 100 Loss 99.95 Loss 99.95 Loss LossLossLoss 186 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - "SNORA59A,EPN2,MFAP4,RNF112,MAPK7,SLC47A1,SNORA59B,B9D1,MIR1180" 9 "SNORA59A,EPN2,MFAP4,RNF112,MAPK7,SLC47A1,SNORA59B,B9D1,MIR1180" 9 B9D1 "344438#2%""Smith-Magenis Syndrome"":3776041,""Potocki-Lupski syndrome (17p11.2 duplication syndrome)"":3776041" - "56512(9|de Smith(2007),Kidd(2008),Redon(2006),Matsuzaki(2009),Park(2010))" 712(1|Ahn(2009)) 1 185 - 0 "344438(30|Ahn(2009),Wong(2007),Redon(2006),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" YBMF74034 18 5909892 6254302 344411 Gain 3 0.903822 372 928 chas 84.24 Gain 100 Gain 100 Gain GainGainGain 279 98.92 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.31 - L3MBTL4 1 L3MBTL4 1 - - - "108096(13|Wang(2007),Matsuzaki(2009),Conrad(2009),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009))" 109(2|Matsuzaki(2009)) - 278 - 0 "128843(37|Conrad(2009),Wang(2007),Durbin(2010),Park(2010),McCarroll(2008),Campbell(2011),Pinto(2011),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" OSBA52088 4 190495017 190838582 343566 Gain 3 0.889859 132 2622 chas 67.28 Gain 51.58 Gain 38.27 Gain GainGainGain 186 NA NA NA "ChAS,IPN,NXS,PTK" 4q35.2 - - 0 - 0 - - "29143(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "343566(95|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Kim(2009),Shaikh(2009),Mills(2006))" "13298(63|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" 27 186 - 0 "343566(346|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401617KM female "research_filter, clinical_filter" AUMQ17072 9 6902404 7245728 343325 Gain 3 0.90081 516 666 chas 86.16 Gain 99.98 Gain 99.98 Gain GainGainGain 430 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.1 - KDM4C 1 KDM4C 1 - - - "12874(4|Conrad(2009),McKernan(2009),Pinto(2007),Shaikh(2009))" "781(6|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Bentley(2008))" - 430 - 0 "286466(40|Conrad(2009),Wong(2007),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401856GC male "research_filter, clinical_filter" WYBU35088 15 23277169 23620154 342986 Gain 3 0.895455 52 6725 chas 1.48 Gain 7.2 Gain 33.11 Gain GainGainGain 13 0 - - "ChAS,IPN,NXS,PTK" 15q11.2 50001(1|contig) "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 "GOLGA8E,HERC2P2,LOC653061,HERC2P7" 4 - "342986#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "342986(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),McKernan(2009),Pang(2010),Pinto(2007),Cooper(2008))" 1263(3|Perry(2008)) 85 13 - 0 "342986(129|Teague(2010),Korbel(2007),Perry(2008),Conrad(2009),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Schuster(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400579HJ female "research_filter, clinical_filter" YSLM40888 14 22601780 22944507 342728 Gain 3 0.869887 580 591 chas 0 - 68.63 Gain 100 Gain #NAME? 306 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "342728(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 306 - 0 "342728(142|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400460DM female "research_filter, clinical_filter" RIAA15120 10 42709645 43050772 341128 Gain 3 0.891128 205 1672 chas 63.18 Gain 98.83 Gain 100 Gain GainGainGain 155 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - "LOC441666,ZNF37BP,LOC84856" 3 "LOC441666,ZNF37BP,LOC84856" 3 - - - "249521(20|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Itsara(2009),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010))" 785(1|Matsuzaki(2009)) 78 154 - 0 "341128(116|Teague(2010),Ahn(2009),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Wang(2008),Levy(2007),Sharp(2005),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Cooper(2008),Campbell(2011),Pinto(2011),Redon(2006),Park(2010),Locke(2006),Itsara(2009))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" COLF20670 14 22624363 22965065 340703 Gain 3 0.866231 551 619 chas 0 - 0 - 0 - --- 291 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "340703(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 291 - 0 "340703(147|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401026AM female clinical_filter YBSU20689 X 7249351 7589926 340576 Gain 3 0.900139 550 620 chas 93.56 Gain 0 - 0 - Gain-- 262 NA NA NA "ChAS,IPN" Xp22.31 - STS 1 STS 1 STS "340576#1%""Steroid sulphatase deficiency (STS)"":1725741" - "245983(6|Wang(2007),Redon(2006),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" - - 262 - 0 "340576(13|Wang(2007),Redon(2006),Durbin(2010),Kidd(2008),Pinto(2007),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" PRPG47770 X 96172289 96511395 339107 Loss 1 0.918363 704 482 chas 100 Loss 0 - 0 - Loss-- 216 NA NA NA "ChAS,IPN" Xq21.33 - DIAPH2 1 DIAPH2 1 DIAPH2 - - 36520(1|Shaikh(2009)) 230(1|de Smith(2007)) - 216 - 0 "233618(12|Teague(2010),Levy(2007),Durbin(2010),Shaikh(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401695BT female "research_filter, clinical_filter" NFPW24786 1 186235180 186573744 338565 Gain 3 0.910154 370 917 chas 80.15 Gain 94.34 Gain 98.85 Gain GainGainGain 164 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.1 - "MIR548F1,C1orf27,PRG4,TPR,OCLM,PDC" 6 "MIR548F1,C1orf27,PRG4,TPR,OCLM,PDC" 6 PRG4 - - 1493(1|McKernan(2009)) "581(9|Ahn(2009),Matsuzaki(2009))" - 164 - 0 "298776(18|Ahn(2009),Wong(2007),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" NSQR79941 16 32524765 32863035 338271 Loss 1 0.878816 24 14707 chas 0 - 0 - 0 - --- 67 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "338271(44|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 76 67 - 0 "338271(262|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401077VC female - EXZC47846 16 32524765 32863035 338271 Gain 4 0.918623 24 14707 chas 0 - 96.26 Gain 100 Gain #NAME? 67 38.65 Gain "BS,GTC" "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "338271(44|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 76 67 - 0 "338271(262|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400468OB female research_filter XOPW74186 20 29652122 29989537 337416 Gain 3 0.901495 277 1222 chas 44.18 Gain 93.91 Gain 72.02 Gain GainGainGain 79 43.72 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20q11.21 150001(1|contig) "DEFB116,DEFB115,DEFB118,DEFB119" 4 "DEFB116,DEFB115,DEFB118,DEFB119" 4 - - - "47775(19|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),McKernan(2009),Pang(2010),Park(2010),Mills(2006))" 108(1|Wheeler(2008)) 1 79 - 0 "187417(81|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2011),Perry(2008b),Park(2010),Jakobsson(2008),Kidd(2008),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" INSC49339 16 32511179 32847935 336757 Loss 1 0.897595 14 25904 chas 15.03 Loss 0 - 0 - Loss-- 64 NA NA NA "ChAS,IPN" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 323941(1|Kidd(2008)) "336757(43|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" "2011(3|Ahn(2009),Perry(2008))" 72 64 - 0 "336757(258|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401334DH female research_filter EJVQ96131 16 32511179 32847935 336757 Loss 1 0.890321 14 25904 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 323941(1|Kidd(2008)) "336757(43|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" "2011(3|Ahn(2009),Perry(2008))" 72 64 - 0 "336757(258|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400738WM female - FPHR45460 12 131478515 131814934 336420 Gain 3 0.887886 307 1099 chas 31.86 Gain 85.72 Gain 99.74 Gain GainGainGain 268 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - "LOC116437,GPR133" 2 "LOC116437,GPR133" 2 - - 34708(1|Korbel(2007)) "236568(46|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" "4368(18|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Levy(2007),Pang(2010))" 18 268 - 0 "327198(133|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" ZJPO23473 19 52284323 52620593 336271 Gain 3 0.894347 376 896 chas 52.22 Gain 99.49 Gain 99.54 Gain GainGainGain 214 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.41 - "ZNF613,ZNF615,ZNF614,ZNF616,ZNF841,FPR3,ZNF432,ZNF350,ZNF649,ZNF577" 10 "ZNF613,ZNF615,ZNF614,ZNF616,ZNF841,FPR3,ZNF432,ZNF350,ZNF649,ZNF577" 10 - - - "336271(4|Itsara(2009),Pinto(2007),Redon(2006),Zogopoulos(2007))" 125(1|Bentley(2008)) 1 214 - 0 "336271(16|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401173AI male "research_filter, clinical_filter" ZQFY18932 X 140330095 140666276 336182 Gain 3 0.906462 135 2508 chas 77.16 Gain 0 - 0 - Gain-- 154 NA NA NA "ChAS,IPN" Xq27.2 - "SPANXA2-OT1,SPANXC" 2 "SPANXA2-OT1,SPANXC" 2 - - 336182(1|Kidd(2008)) "336182(20|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 38 154 - 0 "336182(61|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Sharp(2005),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" LDEW86321 14 87866747 88202625 335879 Gain 3 0.900355 224 1506 chas 96.98 Gain 98.53 Gain 98.53 Gain GainGainGain 185 97.2 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q31.3 - - 0 - 0 - - - "59523(3|Kim(2009),Shaikh(2009),Mills(2006))" 154(2|Mills(2006)) - 185 - 0 "136704(11|Kim(2009),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401786WD male "research_filter, clinical_filter" VQFC85923 3 87231721 87567548 335828 Loss 1 0.909583 396 850 chas 98.56 Loss 99.26 Loss 99.27 Loss LossLossLoss 212 NA NA NA "ChAS,IPN,NXS,PTK" 3p11.2 - "CHMP2B,POU1F1,MIR4795" 3 "CHMP2B,POU1F1,MIR4795" 3 "CHMP2B,POU1F1" - - "5100(2|McKernan(2009),Kim(2009))" "1262(6|Wang(2008),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" - 212 - 0 "335828(42|Banerjee(2011),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" UKBP75340 6 116416471 116752220 335750 Gain 3 0.902333 388 867 chas 92.98 Gain 99.44 Gain 99.44 Gain GainGainGain 186 98.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q22.1 - "COL10A1,TSPYL4,DSE,TSPYL1,NT5DC1" 5 "COL10A1,TSPYL4,DSE,TSPYL1,NT5DC1" 5 "COL10A1,TSPYL1" - - 1549(1|McKernan(2009)) "982(6|Wheeler(2008),Bentley(2008),Ahn(2009),Mills(2006))" 1 186 - 0 "335750(21|Ahn(2009),McKernan(2009),Durbin(2010),Bentley(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" YBSU20689 14 22632039 22966744 334706 Loss 1 0.870853 530 632 chas 0 - 67.8 Loss 99.21 Loss #NAME? 290 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "334706(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 290 - 0 "334706(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401278DM female "research_filter, clinical_filter" NLWZ33045 17 279665 614293 334629 Loss 1 0.923848 214 1571 chas 100 Loss 99.99 Loss 100 Loss LossLossLoss 164 NA NA NA "ChAS,IPN,NXS,PTK" 17p13.3 100001(1|contig) "VPS53,FAM101B" 2 "VPS53,FAM101B" 2 - "334629#1%""Miller-Dieker syndrome (MDS)"":2545429" - "53376(16|Conrad(2009),Ahn(2009),Perry(2008),Matsuzaki(2009),McKernan(2009),Pang(2010),Park(2010))" "8052(33|Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" 1 164 - 0 "334629(86|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Kidd(2008),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Locke(2006),Wilson(2010),Simon-Sanchez(2007),Perry(2008b),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401993HM female "research_filter, clinical_filter" OBJF39540 5 21093789 21428130 334342 Loss 1 0.904428 172 1955 chas 100 Loss 70.97 Loss 100 Loss LossLossLoss 202 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.3 - - 0 - 0 - - - "159210(11|Sebat(2004),Perry(2008),Matsuzaki(2009),Conrad(2009),McKernan(2009),Pang(2010),Kidd(2008),Park(2010))" "1002(2|Hinds(2005),Perry(2008))" 36 202 - 0 "334342(77|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Locke(2006),Itsara(2009),Perry(2008b),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Sebat(2004),Park(2010),Pinto(2011),Sharp(2005),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401191MI male "research_filter, clinical_filter" IENJ56420 9 20087860 20422034 334175 Gain 3 0.895097 326 1028 chas 80.31 Gain 100 Gain 100 Gain GainGainGain 288 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.3 - "MIR4473,MLLT3" 2 "MIR4473,MLLT3" 2 - - - "334175(4|Conrad(2009),McKernan(2009),Shaikh(2009))" "3(2|Pang(2010),Levy(2007))" - 288 - 0 "19605(9|Conrad(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401538NS female "research_filter, clinical_filter" YMBI36841 16 32538293 32872263 333971 Loss 1 0.873718 26 13358 chas 0 - 0 - 0 - --- 67 28.89 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "333971(48|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 80 66 - 0 "333971(249|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401321CE female clinical_filter WVDE74465 14 22632881 22966744 333864 Loss 1 0.880119 525 637 chas 0 - 85.25 Loss 100 Loss #NAME? 289 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "333864(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 289 - 0 "333864(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401838EN male "research_filter, clinical_filter" AYLS39762 11 89813321 90147090 333770 Loss 1 0.915189 273 1227 chas 94.38 Loss 93.98 Loss 100 Loss LossLossLoss 189 98.51 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q14.3 - "NAALAD2,UBTFL1,CHORDC1" 3 "NAALAD2,UBTFL1,CHORDC1" 3 - - - "177007(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Kidd(2008),Shaikh(2009))" "2068(6|Wang(2008),Pang(2010),Levy(2007),Ahn(2009),Matsuzaki(2009))" 13 189 - 0 "181471(45|Teague(2010),Ahn(2009),Redon(2006),Kidd(2010),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Durbin(2010),Pang(2010),Wang(2008),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400663MD female "research_filter, clinical_filter" AYKK27829 14 22634119 22966418 332300 Gain 3 0.864873 512 650 chas 0 - 3.6 Gain 88.4 Gain #NAME? 285 80.46 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "332300(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 285 - 0 "332300(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" HAGL80690 6 57309696 57641858 332163 Gain 3 0.875633 213 1566 chas 34.09 Gain 29.44 Gain 0 - GainGain- 153 84.25 "-,Gain" "BS,IP6" "ChAS,IPN,NXS" 6p11.2 - PRIM2 1 PRIM2 1 - - 3459(1|Ahn(2009)) "332163(42|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" "2109(14|Ahn(2009),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008),Mills(2006))" - 153 - 0 "332163(227|Teague(2010),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Conrad(2009),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2010),Kidd(2008),Wilson(2010),Pang(2010),Pinto(2011),Redon(2006),Ju(2010),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" NFGH10073 14 22635429 22966744 331316 Gain 3 0.86888 508 653 chas 0 - 44 Gain 97.78 Gain #NAME? 282 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "331316(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 282 - 0 "331316(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400553PP male "research_filter, clinical_filter" ZRRL85494 14 22635728 22966744 331017 Gain 3 0.87312 500 663 chas 0 - 41.92 Gain 81.36 Gain #NAME? 281 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "331017(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 281 - 0 "331017(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400043HC female "research_filter, clinical_filter" IDKP47812 14 22635429 22966418 330990 Gain 3 0.868485 504 658 chas 0 - 26.62 Gain 92.1 Gain #NAME? 280 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "330990(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 280 - 0 "330990(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401377MA male "research_filter, clinical_filter" XKMM87171 13 55143755 55474494 330740 Loss 1 0.898315 256 1297 chas 88.32 Loss 100 Loss 100 Loss LossLossLoss 194 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "13q14.3,13q21.1" - - 0 - 0 - - - 2599(1|de Smith(2007)) 1(1|Levy(2007)) - 194 - 0 "148795(12|Kidd(2008),Shaikh(2009),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400634MP male "research_filter, clinical_filter" XNCW62958 13 55143755 55474494 330740 Loss 1 0.912428 256 1297 chas 100 Loss 99.72 Loss 100 Loss LossLossLoss 194 NA NA NA "ChAS,IPN,NXS,PTK" "13q14.3,13q21.1" - - 0 - 0 - - - 2599(1|de Smith(2007)) 1(1|Levy(2007)) - 194 - 0 "148795(12|Kidd(2008),Shaikh(2009),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" UUAC53094 14 22643684 22974280 330597 Loss 1 0.852787 516 641 chas 0 - 0 - 0 - --- 295 100 Loss "BS,GTC,IP6" ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "330597(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 295 - 0 "330597(147|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400849SH male clinical_filter LYLG55293 12 131478239 131808586 330348 Gain 3 0.896544 306 1083 chas 76.48 Gain 91.69 Gain 91.69 Gain GainGainGain 263 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - "LOC116437,GPR133" 2 "LOC116437,GPR133" 2 - - 28360(1|Korbel(2007)) "230220(46|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" "4368(18|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Levy(2007),Pang(2010))" 17 263 - 0 "320850(130|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" TKWO78971 15 85811683 86140453 328771 Gain 3 0.893139 332 993 chas 93.87 Gain 99.69 Gain 99.69 Gain GainGainGain 223 NA NA NA "ChAS,IPN,NXS,PTK" 15q25.3 - AKAP13 1 AKAP13 1 - - - "328771(20|Itsara(2009),Matsuzaki(2009),Conrad(2009),de Smith(2007),McKernan(2009),Wang(2008),Pinto(2007),Park(2010),Mills(2006),Zogopoulos(2007))" "974(3|Wang(2008),Shaikh(2009),Perry(2008))" 12 223 - 0 "328771(135|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),McKernan(2009),Wang(2008),Durbin(2010),Locke(2006),Conrad(2009),Perry(2008b),Pinto(2011),Park(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401368WR male "research_filter, clinical_filter" QRLG88085 14 22616043 22944507 328465 Loss 1 0.872443 552 596 chas 0 - 90.95 Loss 99.71 Loss #NAME? 280 100 Loss "BS,GTC" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "328465(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 280 - 0 "328465(141|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400759FV female "research_filter, clinical_filter" MOBN67062 14 22616043 22944507 328465 Loss 1 0.882403 552 596 chas 0 - 99.58 Loss 100 Loss #NAME? 280 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "328465(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 280 - 0 "328465(141|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400569WC female "research_filter, clinical_filter" ZJPO23473 14 22616043 22943736 327694 Gain 3 0.869993 550 596 chas 0 - 84.01 Gain 99.97 Gain #NAME? 279 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "327694(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 279 - 0 "327694(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401173AI male "research_filter, clinical_filter" KWYE93203 Y 25733051 26060540 327490 Gain 2 0.857299 196 1679 chas 85.52 Gain 0 - 0 - Gain-- 120 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "327490#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "327490(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 120 - 0 "327490(6|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401357MH male "research_filter, clinical_filter" CBBY76424 16 32524765 32851881 327117 Loss 1 0.911942 20 17216 chas 15.47 Loss 0 - 0 - Loss-- 67 NA NA NA "ChAS,IPN" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "327117(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 67 - 0 "327117(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401927SK female research_filter YITU99076 16 32524765 32851881 327117 Loss 1 0.908092 20 17216 chas 0 - 22.72 Loss 0 - -Loss- 67 NA NA NA "ChAS,NXS" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "327117(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 67 - 0 "327117(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401362ME male research_filter QDNW53844 16 32524765 32851881 327117 Loss 1 0.917466 20 17216 chas 0 - 39.8 Loss 99.55 Loss #NAME? 67 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "327117(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 67 - 0 "327117(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400729HC female research_filter UJRA83281 16 32524765 32851881 327117 Loss 1 0.888568 20 17216 chas 0 - 0 - 0 - --- 67 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "327117(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 67 - 0 "327117(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401361GG male - RLDP86471 14 45992101 46318303 326203 Gain 3 0.898164 246 1331 chas 100 Gain 100 Gain 100 Gain GainGainGain 193 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "326203(12|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),McKernan(2009),Altshuler(2010),McCarroll(2008),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" - - 193 - 0 "326203(20|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Altshuler(2010),Simon-Sanchez(2007),Campbell(2011),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400329HJ female "research_filter, clinical_filter" DVRF47676 X 140340737 140666276 325540 Gain 2 0.937862 132 2485 chas 96.16 Gain 0 - 0 - Gain-- 153 NA NA NA "ChAS,IPN" Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 325540(1|Kidd(2008)) "325540(16|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 36 153 - 0 "325540(58|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Sharp(2005),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401847RK male "research_filter, clinical_filter" UXJM82913 7 62437464 62762790 325327 Gain 3 0.892308 80 4118 chas 49.59 Gain 85.98 Gain 85.98 Gain GainGainGain 153 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - LOC643955 1 LOC643955 1 - - 78815(1|Kidd(2008)) "325327(23|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 647(2|Perry(2008)) 68 153 - 0 "325327(59|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Sharp(2005),Iafrate(2004),Altshuler(2010),Durbin(2010),Pang(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" MGYM61346 1 113813722 114138767 325046 Gain 3 0.895001 284 1148 chas 93.59 Gain 97.17 Gain 98.6 Gain GainGainGain 180 97.14 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p13.2 - MAGI3 1 MAGI3 1 - - - "325046(8|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Matsuzaki(2009),Levy(2007))" "721(2|Park(2010),Levy(2007))" 0 180 - 0 "314910(26|Conrad(2009),Ahn(2009),Korbel(2007),Teague(2010),Levy(2007),Conrad(2006),Durbin(2010),Pinto(2011),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400974PS female "research_filter, clinical_filter" ZQHJ50767 16 32538293 32863035 324743 Loss 1 0.880658 22 15463 chas 0 - 0 - 0 - --- 65 24.79 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "324743(41|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 79 65 - 0 "324743(242|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400888MS female - TQQL83388 2 131956545 132280823 324279 Gain 3 0.893545 204 1597 chas 66.48 Gain 66.96 Gain 67.74 Gain GainGainGain 129 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q21.1 - "MIR4784,LOC389043,TUBA3D,WTH3DI,MZT2A,LOC401010,LOC150776,LOC440910,POTEE" 9 "MIR4784,LOC389043,TUBA3D,WTH3DI,MZT2A,LOC401010,LOC150776,LOC440910,POTEE" 9 - - - "324279(35|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),McCarroll(2008))" "1949(3|Wheeler(2008),Matsuzaki(2009),Perry(2008))" 91 129 - 0 "324279(76|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Teague(2010),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" GPMX61747 X 140220878 140544892 324015 Gain 3 0.89488 217 1500 chas 85.83 Gain 0 - 0 - Gain-- 213 100 Gain "BS,GTC,IP6" "ChAS,IPN" "Xq27.1,Xq27.2" - "SPANXC,LDOC1" 2 "SPANXC,LDOC1" 2 - - 324015(1|Kidd(2008)) "299930(14|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 10 213 - 0 "324015(54|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" BKFI83925 16 32554242 32878155 323914 Gain 3 0.887132 32 10448 chas 0 - 29.17 Gain 0 - -Gain- 69 NA NA NA "ChAS,NXS" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "323914(49|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 84 68 - 0 "323914(253|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401990PR male research_filter VYEA28313 14 22635581 22959418 323838 Gain 3 0.87009 489 663 chas 0 - 16.13 Gain 95.67 Gain #NAME? 265 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 645(1|Ahn(2009)) "323838(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 265 - 0 "323838(142|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400983PV female "research_filter, clinical_filter" APOV19283 16 32524765 32847935 323171 Gain 4 0.929818 12 29379 chas 0 - 40.43 Gain 80.19 Gain #NAME? 63 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "323171(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 63 - 0 "323171(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400203NA male research_filter XBAT84080 16 32524765 32847935 323171 Loss 1 0.910991 12 29379 chas 0 - 0 - 0 - --- 63 34.31 Loss "GTC,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "323171(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 63 - 0 "323171(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400186WC female - ISVP82924 16 32524765 32847935 323171 Loss 1 0.929495 12 29379 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "323171(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 63 - 0 "323171(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401400NP male - TAVH54072 16 32524765 32847935 323171 Loss 1 0.931169 12 29379 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 310355(1|Kidd(2008)) "323171(42|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 75 63 - 0 "323171(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400948EV female - TPCN38834 14 22643684 22966744 323061 Gain 3 0.871135 492 657 chas 0 - 41.8 Gain 89.26 Gain #NAME? 276 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "323061(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 276 - 0 "323061(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400879DS female "research_filter, clinical_filter" FMEA92817 14 22643684 22966744 323061 Loss 1 0.875356 492 657 chas 0 - 83.06 Loss 100 Loss #NAME? 276 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "323061(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 276 - 0 "323061(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401175FA female "research_filter, clinical_filter" PUOR77387 14 22643684 22966744 323061 Gain 3 0.868561 492 657 chas 0 - 35.12 Gain 100 Gain #NAME? 276 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "323061(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 276 - 0 "323061(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401603HH female "research_filter, clinical_filter" KGCF91244 14 22643425 22966418 322994 Loss 1 0.855048 490 660 chas 0 - 0 - 0 - --- 274 27.07 Loss GTC ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "322994(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 274 - 0 "322994(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401112LG_1 female clinical_filter AOYC46859 14 22643715 22966418 322704 Gain 3 0.877273 486 665 chas 0 - 83.86 Gain 98.26 Gain #NAME? 274 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "322704(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 273 - 0 "322704(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400307HW male "research_filter, clinical_filter" DBFY56089 16 32554242 32875383 321142 Gain 3 0.898533 28 11894 chas 0 - 89.69 Gain 0 - -Gain- 67 0 - - "ChAS,NXS" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "321142(49|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 84 66 - 0 "321142(249|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400458LS female research_filter PAGW82790 16 32554242 32875383 321142 Gain 3 0.899044 28 11894 chas 0 - 0 - 0 - --- 67 0 Gain IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "321142(49|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 84 66 - 0 "321142(249|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400245SJ female - TKWO78971 21 15006458 15327423 320966 Loss 1 0.86849 90 3606 chas 60.04 Loss 0 - 100 Loss Loss-Loss 134 NA NA NA "ChAS,IPN,PTK" 21q11.2 - "C21orf81,POTED,C21orf15" 3 "C21orf81,POTED,C21orf15" 3 - - - "320966(35|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Ju(2010),Park(2010),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 449(1|Perry(2008)) 100 133 - 0 "320966(97|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Ahn(2009),Jakobsson(2008),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401368WR male "research_filter, clinical_filter" QGND60775 14 22645743 22966418 320676 Loss 1 0.856745 484 663 chas 0 - 0 - 97.53 Loss #NAME? 272 100 Loss "BS,GTC,IP6" "ChAS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "320676(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 272 - 0 "320676(146|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401085LA_1 female "research_filter, clinical_filter" MRAO63769 6 37832390 38152503 320114 Gain 3 0.915745 348 922 chas 100 Gain 100 Gain 100 Gain GainGainGain 189 99.6 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p21.2 - "BTBD9,ZFAND3" 2 "BTBD9,ZFAND3" 2 - - - "69093(8|Pang(2010),Conrad(2009),Pinto(2007),Matsuzaki(2009),Park(2010))" "1810(4|Levy(2007),Matsuzaki(2009))" - 189 - 0 "102214(35|Conrad(2009),Teague(2010),Levy(2007),Durbin(2010),Pang(2010),Pinto(2007),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" WMQY51169 16 32554242 32872263 318022 Loss 1 0.869737 24 13827 chas 0 - 0 - 0 - --- 66 0 - - ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "318022(48|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 84 64 - 0 "318022(242|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_no 400364SS male - HOIC14625 16 32554242 32872263 318022 Loss 1 0.876607 24 13827 chas 0 - 0 - 0 - --- 66 25.32 Loss BS ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "318022(48|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 84 64 - 0 "318022(242|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400619MP male - PEZC72297 Y 25843540 26160237 316698 Gain 2 0.85386 92 3480 chas 32.57 Gain 0 - 0 - Gain-- 151 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "316698#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "316698(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 151 - 0 "316698(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400298ME male "research_filter, clinical_filter" QTRF59074 7 71997192 72313473 316282 Gain 3 0.898306 84 3810 chas 93.52 Gain 86.31 Gain 98.3 Gain GainGainGain 101 99.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "7q11.23,7q11.22" - "MIR4650-2,MIR4650-1,SBDSP1,TYW1B" 4 "MIR4650-2,MIR4650-1,SBDSP1,TYW1B" 4 - - - "316282(28|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Mills(2006))" - 92 101 - 0 "316282(119|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Pinto(2011),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Jakobsson(2008),Kidd(2010b),Perry(2008b),Park(2010),Pinto(2007),McKernan(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" FOMC40154 14 22628662 22944507 315846 Gain 3 0.868808 516 613 chas 0 - 56.33 Gain 98.48 Gain #NAME? 266 85.77 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "315846(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 266 - 0 "315846(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" IUXY17884 14 22635581 22950491 314911 Gain 3 0.872406 485 650 chas 0 - 58.4 Gain 97.48 Gain #NAME? 260 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "314911(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 260 - 0 "314911(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401238QR male "research_filter, clinical_filter" JPSN96941 2 85292184 85606243 314060 Gain 3 0.909668 317 993 chas 89.07 Gain 91.8 Gain 98.86 Gain GainGainGain 202 NA NA NA "ChAS,IPN,NXS,PTK" 2p11.2 - "TGOLN2,ELMOD3,TCF7L1,RETSAT" 4 "TGOLN2,ELMOD3,TCF7L1,RETSAT" 4 - - "43384(3|Pang(2010),Kidd(2008),Ahn(2009))" "10467(4|Park(2010),Wang(2007),McKernan(2009),Ju(2010))" "3298(12|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Shaikh(2009))" 2 202 - 0 "314060(62|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Wang(2007),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" JYCC50302 16 32538293 32851881 313589 Loss 1 0.919687 18 18446 chas 0 - 9.42 Loss 27.46 Loss #NAME? 65 NA NA NA "ChAS,NXS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "313589(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 65 - 0 "313589(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401778CB male research_filter NFNX93095 16 32538293 32851881 313589 Loss 1 0.877645 18 18446 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "313589(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 65 - 0 "313589(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401318AV female - TTCB91135 16 32538293 32851881 313589 Loss 1 0.881868 18 18446 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "313589(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 65 - 0 "313589(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401376RD male - KKJQ91569 16 32538293 32851881 313589 Loss 1 0.877157 18 18446 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "313589(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 65 - 0 "313589(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400258BC female - TZSA84286 16 32538293 32851881 313589 Loss 1 0.898906 18 18446 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 296827(1|Kidd(2008)) "313589(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 78 65 - 0 "313589(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401166WJ female - OFVS61400 16 32564736 32878155 313420 Loss 1 0.857422 30 10807 chas 0 - 0 - 0 - --- 66 22.34 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270384(1|Kidd(2008)) "313420(48|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 87 66 - 0 "313420(251|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401143LK female clinical_filter VHVH83554 14 106536991 106849677 312687 Loss 1 0.907099 76 4169 chas 76.87 Loss 49.88 Loss 91.78 Loss LossLossLoss 147 91.06 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" ZCOM63077 14 106536991 106849677 312687 Loss 1 0.895019 76 4169 chas 76.87 Loss 40.7 Loss 78.69 Loss LossLossLoss 147 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401936BA male "research_filter, clinical_filter" SYKZ99867 14 106536991 106849677 312687 Loss 1 0.896933 76 4169 chas 76.87 Loss 68.95 Loss 79.21 Loss LossLossLoss 147 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402065BG male "research_filter, clinical_filter" MVJH83535 14 106536991 106849677 312687 Loss 1 0.919273 76 4169 chas 76.87 Loss 68.52 Loss 80.07 Loss LossLossLoss 147 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401771OS male "research_filter, clinical_filter" VDRD32700 14 106536991 106849677 312687 Loss 1 0.91025 76 4169 chas 76.87 Loss 68.52 Loss 83.21 Loss LossLossLoss 147 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400271SR male "research_filter, clinical_filter" OWBB95825 14 106536991 106849677 312687 Gain 3 0.895858 76 4169 chas 0 - 87.62 Gain 87.62 Gain #NAME? 147 67.19 Gain "BS,GTC" "ChAS,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312687(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 147 - 0 "312687(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401275SJ male "research_filter, clinical_filter" VUND65965 14 106536991 106849644 312654 Gain 3 0.912358 75 4225 chas 68.05 Gain 87.63 Gain 87.63 Gain GainGainGain 146 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "312654(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 56 146 - 0 "312654(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" AFNK41813 14 22631885 22944507 312623 Loss 1 0.867418 512 611 chas 0 - 0 - 96.88 Loss #NAME? 264 0 - - "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "312623(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 264 - 0 "312623(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401054VM female "research_filter, clinical_filter" UAZI16039 7 158571247 158883818 312572 Gain 3 0.901181 266 1179 chas 100 Gain 100 Gain 100 Gain GainGainGain 204 98.91 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q36.3 - "LOC154822,WDR60,VIPR2,ESYT2" 4 "LOC154822,WDR60,VIPR2,ESYT2" 4 VIPR2 - - "296818(42|Conrad(2009),Perry(2008),Matsuzaki(2009),McKernan(2009),Pang(2010),Tuzun(2005),Park(2010),Zogopoulos(2007))" "9399(43|Conrad(2009),Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kim(2009))" 1 204 - 0 "311429(98|Conrad(2009),Ahn(2009),Perry(2008),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Tuzun(2005),Park(2010),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400625FT male "research_filter, clinical_filter" JITM64437 8 90471789 90783871 312083 Gain 4 0.946051 192 1633 chas 100 Gain 100 Gain 100 Gain GainGainGain 184 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q21.3 - RIPK2 1 RIPK2 1 - - 1561(1|Ahn(2009)) 3431(1|Matsuzaki(2009)) 421(1|Matsuzaki(2009)) - 184 - 0 "277746(17|Ahn(2009),Wong(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400661AD male "research_filter, clinical_filter" VBTG63612 X 37221176 37532829 311654 Gain 3 0.89317 250 1251 chas 96.85 Gain 0 - 0 - Gain-- 160 NA NA NA "ChAS,IPN" Xp21.1 - "LANCL3,PRRG1" 2 "LANCL3,PRRG1" 2 - - - "6878(2|Pang(2010),Conrad(2009))" - 21 160 - 0 "21390(7|Pang(2010),Conrad(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401550SP female "research_filter, clinical_filter" FPHR45460 15 78029184 78340374 311191 Gain 3 0.89256 228 1370 chas 51.52 Gain 78.83 Gain 99.43 Gain GainGainGain 164 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "15q25.1,15q24.3" - "LOC645752,TBC1D2B,LOC91450" 3 "LOC645752,TBC1D2B,LOC91450" 3 - - - "35964(6|Conrad(2009),Perry(2008))" 1(1|Levy(2007)) 44 164 - 0 "311191(57|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" EZDG77492 14 22633604 22944507 310904 Loss 1 0.859923 501 621 chas 0 - 6.32 Loss 100 Loss #NAME? 261 87.31 Loss GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "310904(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 261 - 0 "310904(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400308SP male "research_filter, clinical_filter" WYNE83745 14 22633724 22944507 310784 Gain 3 0.871023 499 624 chas 0 - 61.46 Gain 100 Gain #NAME? 260 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "310784(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 260 - 0 "310784(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401844ZD male "research_filter, clinical_filter" AVKM43792 22 32469017 32779779 310763 Gain 3 0.900108 345 903 chas 67.27 Gain 89.96 Gain 97.15 Gain GainGainGain 214 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 22q12.3 - "LOC339666,AP1B1P1,C22orf42,RFPL3-AS1,SLC5A1,RFPL3,RFPL2,SLC5A4" 8 "LOC339666,AP1B1P1,C22orf42,RFPL3-AS1,SLC5A1,RFPL3,RFPL2,SLC5A4" 8 SLC5A1 - - "293332(4|Pang(2010),Conrad(2009),Matsuzaki(2009),Simon-Sanchez(2007))" "446(3|Levy(2007),Mills(2006))" 41 214 - 0 "310763(36|Conrad(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401246HH male "research_filter, clinical_filter" NKHQ61532 16 34445083 34755816 310734 Gain 3 0.895521 180 1735 chas 93.05 Gain 93.08 Gain 93.08 Gain GainGainGain 185 93.08 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 297414(1|Kidd(2008)) "310734(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 185 - 0 "310734(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" JORC32909 16 34445083 34754808 309726 Gain 3 0.883917 177 1759 chas 93.02 Gain 99.49 Gain 99.49 Gain GainGainGain 184 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 297414(1|Kidd(2008)) "309726(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 184 - 0 "309726(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401086MD male "research_filter, clinical_filter" ACWT82545 Y 25856645 26166354 309710 Gain 2 0.85098 84 3731 chas 96.18 Gain 0 - 0 - Gain-- 148 NA NA NA "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "309710#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "309710(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 148 - 0 "309710(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" IJLN67055 14 22633668 22943215 309548 Gain 3 0.868773 495 626 chas 0 - 13.87 Gain 100 Gain #NAME? 253 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "309548(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 253 - 0 "309548(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400982BS female "research_filter, clinical_filter" ZMDC73313 16 32554242 32863035 308794 Gain 3 0.905719 20 16252 chas 0 - 0 - 0 - --- 64 0 - - ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "308794(41|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "308794(235|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_no 401165SB female - EJHE40652 14 22635728 22944507 308780 Gain 3 0.866631 480 644 chas 0 - 74.72 Gain 95.45 Gain #NAME? 254 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "308780(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 254 - 0 "308780(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" TGHP62000 3 121125773 121434434 308662 Gain 3 0.863926 428 722 chas 17.44 Gain 22.33 Gain 0 - GainGain- 188 NA NA NA "ChAS,IPN,NXS" 3q13.33 - "FBXO40,POLQ,ARGFX,GOLGB1,HCLS1,STXBP5L" 6 "FBXO40,POLQ,ARGFX,GOLGB1,HCLS1,STXBP5L" 6 - - - "58580(3|de Smith(2007),Redon(2006),Perry(2008))" - 1 187 FBXO40#asd_candidate 1 "308662(23|Wong(2007),Redon(2006),Perry(2008),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400882DD male "research_filter, clinical_filter" ZWJR15881 1 43042195 43350823 308629 Gain 3 0.902019 344 899 chas 92.54 Gain 99.86 Gain 99.86 Gain GainGainGain 168 NA NA NA "ChAS,IPN,NXS,PTK" 1p34.2 - "ZNF691,CCDC30,CLDN19,C1orf50,LOC100129924,PPIH,ERMAP,LEPRE1,YBX1,CCDC23" 10 "ZNF691,CCDC30,CLDN19,C1orf50,LOC100129924,PPIH,ERMAP,LEPRE1,YBX1,CCDC23" 10 "ERMAP,CLDN19,LEPRE1" - - 1566(1|McKernan(2009)) 441(1|Park(2010)) 0 168 - 0 "241211(17|Pinto(2011),Park(2010),McKernan(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" ZRXE40373 14 22635429 22943573 308145 Gain 3 0.871845 484 637 chas 0 - 60.9 Gain 100 Gain #NAME? 251 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "308145(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 251 - 0 "308145(137|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400730SH male "research_filter, clinical_filter" FSLR52955 14 22635429 22943573 308145 Gain 3 0.864063 484 637 chas 0 - 35.8 Gain 100 Gain #NAME? 251 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "308145(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 251 - 0 "308145(137|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400987FB male "research_filter, clinical_filter" JQLR11985 14 106541740 106849677 307938 Gain 3 0.887989 72 4337 chas 35.82 Gain 33.78 Gain 0 - GainGain- 146 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "307938(96|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 57 146 - 0 "307938(660|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400800MW female "research_filter, clinical_filter" YEVU55281 14 22633668 22941362 307695 Gain 3 0.864232 491 627 chas 0 - 0 - 0 - --- 249 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "307695(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 249 - 0 "307695(134|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401453OL male clinical_filter AYKK27829 16 32564736 32872263 307528 Loss 1 0.873233 22 14644 chas 0 - 0 - 0 - --- 63 22.77 Loss "BS,GTC,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270384(1|Kidd(2008)) "307528(47|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 87 62 - 0 "307528(240|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400383HL female - PDTM24300 16 32564736 32872263 307528 Loss 1 0.883968 22 14644 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270384(1|Kidd(2008)) "307528(47|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 87 62 - 0 "307528(240|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401036WS female - KEHV72339 14 22635728 22942890 307163 Gain 3 0.865001 474 649 chas 0 - 0.88 Gain 0 - -Gain- 246 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "307163(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 246 - 0 "307163(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400733SW male "research_filter, clinical_filter" LHMB79045 16 32554242 32860805 306564 Loss 1 0.885054 19 17031 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "306564(41|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "306564(234|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401285HN male - JPSN96941 16 32554242 32860805 306564 Loss 1 0.876476 19 17031 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "306564(41|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "306564(234|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401612HB male - DQHB62647 14 22633724 22940138 306415 Gain 3 0.867211 479 641 chas 0 - 25.89 Gain 0 - -Gain- 246 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "306415(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 246 - 0 "306415(134|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401732HW male "research_filter, clinical_filter" LHRU87236 X 140340737 140647150 306414 Gain 3 0.888454 128 2412 chas 59.11 Gain 0 - 0 - Gain-- 152 95.9 Gain "BS,GTC,IP6" "ChAS,IPN" Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 306414(1|Kidd(2008)) "306414(11|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 32 152 - 0 "306414(53|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Sharp(2005),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401038LN female "research_filter, clinical_filter" EXZC47846 16 34449595 34755816 306222 Gain 3 0.899291 176 1749 chas 94.42 Gain 94.45 Gain 94.45 Gain GainGainGain 179 94.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400468OB female "research_filter, clinical_filter" ALWU32623 16 34449595 34755816 306222 Gain 3 0.894435 176 1749 chas 94.42 Gain 94.41 Gain 94.45 Gain GainGainGain 179 94.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400595CP female "research_filter, clinical_filter" RVIS81666 16 34449595 34755816 306222 Gain 3 0.910846 176 1749 chas 94.42 Gain 91.28 Gain 98.06 Gain GainGainGain 179 94.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" UKBP75340 16 34449595 34755816 306222 Gain 3 0.890855 176 1749 chas 94.42 Gain 92.76 Gain 94.45 Gain GainGainGain 179 96.92 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" PAGW82790 16 34449595 34755816 306222 Gain 3 0.90085 176 1749 chas 94.42 Gain 95.51 Gain 94.45 Gain GainGainGain 179 94.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" VGHI55406 16 34449595 34755816 306222 Gain 3 0.893571 176 1749 chas 82.81 Gain 95.51 Gain 95.51 Gain GainGainGain 179 94.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400221VM female "research_filter, clinical_filter" VWJW18084 16 34449595 34755816 306222 Gain 3 0.890659 176 1749 chas 94.42 Gain 98.27 Gain 99.96 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400441GS male "research_filter, clinical_filter" LHPN45961 16 34449595 34755816 306222 Gain 4 0.941072 176 1749 chas 94.42 Gain 100 Gain 98.27 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" BKFI83925 16 34449595 34755816 306222 Gain 3 0.895904 176 1749 chas 94.42 Gain 98.06 Gain 98.23 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" RPJZ72910 16 34449595 34755816 306222 Gain 3 0.894112 176 1749 chas 94.42 Gain 94.25 Gain 98.27 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401395OP male "research_filter, clinical_filter" BCMG96058 16 34449595 34755816 306222 Gain 4 0.939301 176 1749 chas 94.42 Gain 98.27 Gain 98.27 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400013TA male "research_filter, clinical_filter" XSMN99460 16 34449595 34755816 306222 Gain 3 0.891519 176 1749 chas 94.42 Gain 98.27 Gain 96.9 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401235IA male "research_filter, clinical_filter" NFPW24786 16 34449595 34755816 306222 Gain 3 0.890895 176 1749 chas 89.59 Gain 98.27 Gain 98.23 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" XUQQ42504 16 34449595 34755816 306222 Gain 3 0.889061 176 1749 chas 94.42 Gain 79.26 Gain 94.45 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401702GB male "research_filter, clinical_filter" OULL87238 16 34449595 34755816 306222 Gain 3 0.892792 176 1749 chas 83.68 Gain 73.76 Gain 86.22 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 292902(1|Kidd(2008)) "306222(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 4 179 - 0 "306222(118|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" XZCA75295 16 32554242 32860125 305884 Loss 1 0.881615 17 19117 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "305884(41|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "305884(234|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400033KC female - WMQY51169 7 72005363 72310479 305117 Gain 3 0.883594 75 4123 chas 5.28 Gain 55.23 Gain 0 - GainGain- 93 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" "7q11.23,7q11.22" - "MIR4650-2,MIR4650-1,SBDSP1,TYW1B" 4 "MIR4650-2,MIR4650-1,SBDSP1,TYW1B" 4 - - - "305117(28|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Mills(2006))" - 93 93 - 0 "305117(119|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Pinto(2011),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Jakobsson(2008),Kidd(2010b),Perry(2008b),Park(2010),Pinto(2007),McKernan(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400364SS male "research_filter, clinical_filter" LNYN65073 Y 25848007 26153070 305064 Loss 0 0.856511 80 3861 chas 99.64 Loss 0 - 0 - Loss-- 149 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "305064#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "305064(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 149 - 0 "305064(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 401924ST male "research_filter, clinical_filter" KEHV72339 Y 25848007 26152974 304968 Gain 2 0.875268 78 3960 chas 100 Gain 0 - 0 - Gain-- 149 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "304968#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "304968(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 149 - 0 "304968(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" ZPIM60940 2 137920766 138225635 304870 Loss 1 0.924703 328 932 chas 100 Loss 98.46 Loss 98.49 Loss LossLossLoss 202 98.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q22.1 - THSD7B 1 THSD7B 1 - - - "8026(2|de Smith(2007),McKernan(2009))" 615(1|Altshuler(2010)) - 202 - 0 "304870(22|Teague(2010),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" TGEI86896 14 22633800 22938641 304842 Gain 3 0.860618 474 644 chas 0 - 6.19 Gain 100 Gain #NAME? 245 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "304842(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 245 - 0 "304842(134|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401742KB male "research_filter, clinical_filter" BYSK29073 14 22635809 22940138 304330 Gain 3 0.872191 459 664 chas 0 - 42.88 Gain 0 - -Gain- 240 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "304330(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 240 - 0 "304330(134|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400620MT male "research_filter, clinical_filter" VOUF55858 16 34471298 34774280 302983 Gain 3 0.887711 176 1731 chas 93.91 Gain 100 Gain 100 Gain GainGainGain 179 94.32 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "302983(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 179 - 0 "302983(114|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400338SR male "research_filter, clinical_filter" UEDI98118 16 34471298 34774280 302983 Gain 3 0.882468 176 1731 chas 75.6 Gain 78.64 Gain 100 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "302983(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 179 - 0 "302983(114|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" FPLE23103 16 34471298 34774280 302983 Gain 3 0.892377 176 1731 chas 93.91 Gain 93.7 Gain 95.46 Gain GainGainGain 179 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "302983(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 179 - 0 "302983(114|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" MRIL85955 2 96097384 96400008 302625 Gain 3 0.905251 127 2401 chas 95.39 Gain 98.36 Gain 98.36 Gain GainGainGain 91 NA NA NA "ChAS,IPN,NXS,PTK" 2q11.1 - "TRIM43B,TRIM43" 2 "TRIM43B,TRIM43" 2 - - "253777(3|Ahn(2009),Korbel(2007),Tuzun(2005))" "110102(4|Conrad(2009),Matsuzaki(2009))" - 88 91 - 0 "302625(15|Teague(2010),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Korbel(2007),Tuzun(2005),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400705KK male "research_filter, clinical_filter" ELGU40718 4 92882506 93183756 301251 Loss 1 0.920166 148 2049 chas 98.23 Loss 98.25 Loss 98.25 Loss LossLossLoss 121 98.3 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q22.1 - - 0 - 0 - - - "45369(3|Conrad(2009),Shaikh(2009))" 1(1|Mills(2006)) - 121 - 0 "301251(18|Conrad(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401259LS female "research_filter, clinical_filter" EJLX27201 14 22643684 22944507 300824 Loss 1 0.854156 472 638 chas 0 - 0 - 100 Loss #NAME? 249 59.04 - BS "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "300824(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 249 - 0 "300824(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400545EW_1 female "research_filter, clinical_filter" GWDY85049 14 22643684 22944507 300824 Loss 1 0.868273 472 638 chas 0 - 33.56 Loss 99.04 Loss #NAME? 249 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "300824(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 249 - 0 "300824(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401093VL female "research_filter, clinical_filter" FDGT59945 14 22643715 22944507 300793 Loss 1 0.865878 470 641 chas 0 - 0 - 84.45 Loss #NAME? 249 NA NA NA "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "300793(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 248 - 0 "300793(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401475MK male "research_filter, clinical_filter" MRAO63769 16 69977422 70277619 300198 Gain 3 0.885112 45 6822 chas 0 - 0 - 0 - --- 76 15.59 Gain BS ChAS 16q22.1 - "MIR1972-2,MIR1972-1,PDPR,CLEC18A,CLEC18C,LOC729513,PDXDC2P" 7 "MIR1972-2,MIR1972-1,PDPR,CLEC18A,CLEC18C,LOC729513,PDXDC2P" 7 - - - "300198(54|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1446(5|Levy(2007),Wheeler(2008),Matsuzaki(2009))" 95 75 - 0 "300198(190|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400093BL female - TGGX58243 14 22643684 22943573 299890 Loss 1 0.859667 468 642 chas 0 - 0 - 0 - --- 245 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "299890(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 245 - 0 "299890(137|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400942HR male clinical_filter NDHJ32269 16 32564622 32863035 298414 Loss 1 0.878993 19 16578 chas 0 - 0 - 0 - --- 61 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270498(1|Kidd(2008)) "298414(40|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 86 61 - 0 "298414(233|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 402008MC female - HARD47518 17 19947921 20246237 298317 Gain 3 0.89319 456 655 chas 83.43 Gain 93.96 Gain 99.21 Gain GainGainGain 157 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - "CCDC144C,SPECC1" 2 "CCDC144C,SPECC1" 2 - "298317#2%""Smith-Magenis Syndrome"":3776041,""Potocki-Lupski syndrome (17p11.2 duplication syndrome)"":3776041" - "32783(5|de Smith(2007),Matsuzaki(2009))" - 13 157 - 0 "265410(18|Wong(2007),Alkan(2009),Locke(2006),Durbin(2010),Kidd(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" QCXI89270 16 32554242 32851881 297640 Loss 1 0.900129 16 19842 chas 0 - 0 - 0 - --- 64 27.05 Loss BS ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400558BL female - FXID76383 16 32554242 32851881 297640 Loss 1 0.887974 16 19842 chas 0 - 0 - 0 - --- 64 29.95 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 401922MW male - GPXE42967 16 32554242 32851881 297640 Loss 1 0.896128 16 19842 chas 0 - 0 - 0 - --- 64 27.01 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400006DK female - CRTB70467 16 32554242 32851881 297640 Loss 1 0.863354 16 19842 chas 0 - 0 - 0 - --- 64 27.05 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400577MK female - FSGH36026 16 32554242 32851881 297640 Loss 1 0.899778 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401254AE male - WNMH95182 16 32554242 32851881 297640 Loss 1 0.878638 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401302LJ male - IWRE15730 16 32554242 32851881 297640 Loss 1 0.877817 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 402054BD male - KWBM98824 16 32554242 32851881 297640 Loss 1 0.904789 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401212HJ female - TGEI86896 16 32554242 32851881 297640 Loss 1 0.891041 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401742KB male - KKFR54086 16 32554242 32851881 297640 Loss 1 0.895611 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401443JK male - IJLN67055 16 32554242 32851881 297640 Loss 1 0.893718 16 19842 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "297640(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 83 63 - 0 "297640(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400982BS female - JPDY25055 14 22643684 22940347 296664 Loss 1 0.865413 455 653 chas 0 - 0 - 0 - --- 236 100 Loss "BS,GTC" ChAS 14q11.2 - - 0 - 0 - - - "296664(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 236 - 0 "296664(134|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_yes 401102RD male clinical_filter FNEG58263 Y 25856645 26153070 296426 Loss 0 0.857983 68 4424 chas 100 Loss 0 - 0 - Loss-- 144 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "296426#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "296426(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 144 - 0 "296426(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400836LK male "research_filter, clinical_filter" EMAP66239 Y 25856645 26153070 296426 Loss 0 0.855241 68 4424 chas 100 Loss 0 - 0 - Loss-- 144 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "296426#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "296426(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 981(1|Matsuzaki(2009)) 100 144 - 0 "296426(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 401618HR male "research_filter, clinical_filter" GPMX61747 9 11645688 11941917 296230 Loss 1 0.908977 196 1519 chas 99.42 Loss 98.44 Loss 98.44 Loss LossLossLoss 220 96.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "296230(43|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 1 220 - 0 "296230(111|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),McCarroll(2006),Park(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" AZMC27188 1 218724255 219020322 296068 Gain 3 0.897641 192 1550 chas 96.14 Gain 96.41 Gain 100 Gain GainGainGain 185 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q41 - - 0 - 0 - - - 5190(1|Conrad(2009)) "983(5|Wang(2008),Levy(2007),Ahn(2009),Wheeler(2008))" - 185 - 0 "13965(26|Wang(2008),Conrad(2009),Levy(2007),Ahn(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" GFOF72186 16 34460183 34755816 295634 Gain 3 0.90082 175 1699 chas 97.8 Gain 98.93 Gain 97.83 Gain GainGainGain 172 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 282314(1|Kidd(2008)) "295634(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "295634(115|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" FSGH36026 16 34460183 34755816 295634 Gain 3 0.888552 175 1699 chas 97.8 Gain 99.79 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 282314(1|Kidd(2008)) "295634(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "295634(115|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" KIIK22313 16 34460183 34755816 295634 Gain 3 0.894084 175 1699 chas 92.3 Gain 81.56 Gain 72.07 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 282314(1|Kidd(2008)) "295634(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "295634(115|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401496SL male "research_filter, clinical_filter" TLUK35377 4 189183166 189478258 295093 Gain 3 0.909554 214 1385 chas 94.75 Gain 95.89 Gain 100 Gain GainGainGain 290 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q35.2 - LOC401164 1 LOC401164 1 - - - "295093(48|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Pang(2010),Kidd(2008),Tuzun(2005),McCarroll(2005),Ju(2010),Zogopoulos(2007))" "3520(23|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Levy(2007),Bentley(2008),Pang(2010),Altshuler(2010),Mills(2006))" 2 290 - 0 "295093(172|Ju(2010),Redon(2006),Conrad(2009),Tuzun(2005),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Teague(2010),De(Smith_2007),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" QMDZ51984 16 32554242 32848894 294653 Loss 1 0.88554 13 24554 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "294653(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 82 59 - 0 "294653(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401979TB male - NFGH10073 2 97731120 98025634 294515 Loss 1 0.891742 64 4674 chas 51.55 Loss 9.87 Loss 0 - LossLoss- 86 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "FAHD2B,ANKRD36,LOC100506123" 3 "FAHD2B,ANKRD36,LOC100506123" 3 - - - "294515(31|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009),Mills(2006))" "1431(2|Pang(2010),Perry(2008))" 93 86 - 0 "294515(154|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Wang(2008),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Itsara(2009),Pinto(2011),Jakobsson(2008),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" BQMP83404 16 34471298 34765203 293906 Gain 3 0.890903 173 1708 chas 96.81 Gain 98.41 Gain 100 Gain GainGainGain 173 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "293906(41|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 173 - 0 "293906(114|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400474GF female "research_filter, clinical_filter" HEAQ37888 16 32554242 32847935 293694 Loss 1 0.905226 8 41956 chas 0 - 0 - 0 - --- 60 27.38 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "293694(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 82 59 - 0 "293694(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400956AM male - QKZI23426 16 32554242 32847935 293694 Loss 1 0.893563 8 41956 chas 0 - 0 - 0 - --- 60 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "293694(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 82 59 - 0 "293694(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400943DV female - VDRD32700 16 32554242 32847935 293694 Loss 1 0.922666 8 41956 chas 0 - 0 - 0 - --- 60 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 280878(1|Kidd(2008)) "293694(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 82 59 - 0 "293694(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400271SR male - TAVH54072 14 22677187 22970327 293141 Gain 3 0.865765 466 630 chas 0 - 26.32 Gain 0 - -Gain- 262 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "293141(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 261 - 0 "293141(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400948EV female "research_filter, clinical_filter" JVBB89605 12 30955156 31247803 292648 Gain 3 0.893229 336 873 chas 15.01 Gain 90.14 Gain 94.94 Gain GainGainGain 275 92.45 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p11.21 - "LOC100287314,TSPAN11,LOC100506660,DDX11" 4 "LOC100287314,TSPAN11,LOC100506660,DDX11" 4 DDX11 - - "282505(28|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Zogopoulos(2007))" "1310(2|Wang(2008),Perry(2008))" 20 275 - 0 "292648(80|Conrad(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2008),Wang(2008),Pinto(2011),McKernan(2009),Durbin(2010),Gusev(2009),Wang(2007),Shaikh(2009),Perry(2008b),Itsara(2009),Pinto(2007),Korbel(2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" ZHGO36222 2 97865736 98158112 292377 Gain 3 0.890072 55 5414 chas 97.89 Gain 99.39 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36,ANKRD36B,LOC100506123" 3 "ANKRD36,ANKRD36B,LOC100506123" 3 - - - "292377(27|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009))" "1425(3|Conrad(2009),Perry(2008))" 96 43 - 0 "292377(146|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),Korbel(2007),McCarroll(2008),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401135CS female "research_filter, clinical_filter" PCSL59179 14 22678034 22970223 292190 Gain 3 0.870989 456 642 chas 0 - 39.01 Gain 100 Gain #NAME? 255 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "292190(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 255 - 0 "292190(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401879HJ male "research_filter, clinical_filter" UBHC61833 16 32570986 32863035 292050 Loss 1 0.899251 16 19470 chas 0 - 0 - 0 - --- 57 21.84 Loss "BS,GTC" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "292050(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "292050(230|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400768MN female - SSWV37655 16 32570986 32863035 292050 Gain 3 0.894451 16 19470 chas 0 - 0 - 0 - --- 57 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "292050(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "292050(230|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401706BJ female - FCIS19557 14 22677187 22969094 291908 Loss 1 0.85131 456 641 chas 0 - 14.71 Loss 96.68 Loss #NAME? 255 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "291908(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 254 - 0 "291908(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401931JL female "research_filter, clinical_filter" TFBW53379 11 50306193 50596467 290275 Gain 3 0.894485 100 2932 chas 62.51 Gain 86.49 Gain 86.67 Gain GainGainGain 62 87.03 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p11.12 - LOC646813 1 LOC646813 1 - - 74784(1|Kidd(2008)) "290275(16|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" 603(1|Wang(2008)) 12 61 - 0 "290275(77|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" YBMF74034 Y 25848007 26137793 289787 Loss 0 0.859475 60 4911 chas 73.62 Loss 0 - 0 - Loss-- 144 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "289787#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "289787(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 144 - 0 "289787(5|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401806DL male "research_filter, clinical_filter" BHQW11777 Y 25848007 26137793 289787 Gain 2 0.867673 60 4911 chas 100 Gain 0 - 0 - Gain-- 144 NA NA NA "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "289787#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "289787(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 144 - 0 "289787(5|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" GHOG89686 14 22677187 22966744 289558 Gain 3 0.873222 452 642 chas 0 - 45.84 Gain 88.07 Gain #NAME? 251 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "289558(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 250 - 0 "289558(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401459HF male "research_filter, clinical_filter" WKAY66815 16 34466475 34755816 289342 Gain 4 0.951248 174 1672 chas 99.93 Gain 100 Gain 99.96 Gain GainGainGain 172 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400681MC female "research_filter, clinical_filter" YDUL84017 16 34466475 34755816 289342 Gain 3 0.903309 174 1672 chas 99.93 Gain 99.96 Gain 99.96 Gain GainGainGain 172 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" NCJU46793 16 34466475 34755816 289342 Gain 3 0.887401 174 1672 chas 89.9 Gain 86.53 Gain 100 Gain GainGainGain 172 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" PBCS27067 16 34466475 34755816 289342 Gain 3 0.875741 174 1672 chas 99.93 Gain 100 Gain 0 - GainGain- 172 NA NA NA "ChAS,IPN,NXS" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" IELV11932 16 34466475 34755816 289342 Gain 3 0.891008 174 1672 chas 99.93 Gain 99.96 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400869BK female "research_filter, clinical_filter" VRGJ17464 16 34466475 34755816 289342 Gain 3 0.896542 174 1672 chas 99.93 Gain 98.17 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401914PR male "research_filter, clinical_filter" EDVH13355 16 34466475 34755816 289342 Gain 3 0.906567 174 1672 chas 99.93 Gain 99.96 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401347DH male "research_filter, clinical_filter" MJBR37071 16 34466475 34755816 289342 Gain 3 0.888136 174 1672 chas 99.93 Gain 100 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" YQAG97358 16 34466475 34755816 289342 Gain 3 0.891995 174 1672 chas 99.93 Gain 100 Gain 100 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401499JR male "research_filter, clinical_filter" IAMC34091 16 34466475 34755816 289342 Gain 3 0.885236 174 1672 chas 94.92 Gain 99.96 Gain 99.96 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402067KS female "research_filter, clinical_filter" PGEB85888 16 34466475 34755816 289342 Gain 3 0.896052 174 1672 chas 89.01 Gain 81.31 Gain 87.21 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" TLUO25428 16 34466475 34755816 289342 Gain 3 0.884172 174 1672 chas 79.16 Gain 78.17 Gain 94.29 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401836SI female "research_filter, clinical_filter" XIWO60009 16 34466475 34755816 289342 Gain 3 0.901667 174 1672 chas 89.01 Gain 94.46 Gain 97.1 Gain GainGainGain 172 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289342(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 172 - 0 "289342(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402074RR female "research_filter, clinical_filter" LSSN67820 16 32588892 32878155 289264 Loss 1 0.865301 26 11570 chas 0 - 0 - 0 - --- 55 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "289264(47|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 94 55 - 0 "289264(242|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401444LD male clinical_filter SKLJ58672 16 34466679 34755816 289138 Gain 3 0.910668 173 1681 chas 100 Gain 91.65 Gain 93.74 Gain GainGainGain 171 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" DGQM75197 16 34466679 34755816 289138 Gain 3 0.892866 173 1681 chas 100 Gain 90.37 Gain 100 Gain GainGainGain 171 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" YKLI59783 16 34466679 34755816 289138 Gain 3 0.888731 173 1681 chas 100 Gain 99.96 Gain 100 Gain GainGainGain 171 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" OPKR54750 16 34466679 34755816 289138 Gain 3 0.891286 173 1681 chas 100 Gain 100 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401822TL female "research_filter, clinical_filter" PCGN60952 16 34466679 34755816 289138 Gain 3 0.887557 173 1681 chas 100 Gain 100 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401364GM male "research_filter, clinical_filter" NVMX58254 16 34466679 34755816 289138 Gain 3 0.878914 173 1681 chas 94.99 Gain 100 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402060PD female "research_filter, clinical_filter" PYJA98100 16 34466679 34755816 289138 Gain 3 0.883009 173 1681 chas 87.7 Gain 98.24 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401981GF female "research_filter, clinical_filter" UBKP24592 16 34466679 34755816 289138 Gain 3 0.903776 173 1681 chas 100 Gain 98.55 Gain 98.55 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401513KC male "research_filter, clinical_filter" UHFE12130 16 34466679 34755816 289138 Gain 4 0.941766 173 1681 chas 100 Gain 100 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401198TI female "research_filter, clinical_filter" FCFF79727 16 34466679 34755816 289138 Gain 3 0.894556 173 1681 chas 100 Gain 97.53 Gain 97.53 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401384BP male "research_filter, clinical_filter" RCXD61683 16 34466679 34755816 289138 Gain 3 0.890319 173 1681 chas 100 Gain 97.1 Gain 97.1 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401465TB male "research_filter, clinical_filter" DOIH36842 16 34466679 34755816 289138 Gain 3 0.886921 173 1681 chas 100 Gain 98.24 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" BKPJ24282 16 34466679 34755816 289138 Gain 3 0.895796 173 1681 chas 94.89 Gain 97.53 Gain 97.53 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401458RT male "research_filter, clinical_filter" TUPR75049 16 34466679 34755816 289138 Gain 3 0.88466 173 1681 chas 84.58 Gain 90.57 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" CORE80412 16 34466679 34755816 289138 Gain 3 0.894413 173 1681 chas 76.81 Gain 78.58 Gain 97.1 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400581VJ female "research_filter, clinical_filter" CYTX87896 16 34466679 34755816 289138 Gain 3 0.885606 173 1681 chas 0 - 100 Gain 100 Gain #NAME? 171 NA NA NA "ChAS,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "289138(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289138(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 400967PK male "research_filter, clinical_filter" MRIL85955 16 34466475 34755553 289079 Gain 3 0.893531 172 1690 chas 99.93 Gain 90.85 Gain 100 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 276022(1|Kidd(2008)) "289079(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 171 - 0 "289079(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400705KK male "research_filter, clinical_filter" KHBO80872 2 97736731 98025634 288904 Loss 1 0.872302 58 5068 chas 42.02 Loss 37.04 Loss 100 Loss LossLossLoss 82 97.36 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q11.2 - "FAHD2B,ANKRD36,LOC100506123" 3 "FAHD2B,ANKRD36,LOC100506123" 3 - - - "288904(30|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009),Mills(2006))" 791(1|Perry(2008)) 93 82 - 0 "288904(148|Ju(2010),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Itsara(2009),Pinto(2011),Jakobsson(2008),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400718PS male "research_filter, clinical_filter" WWCZ24238 2 97736731 98025634 288904 Loss 1 0.880952 58 5068 chas 91.95 Loss 50.36 Loss 100 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 2q11.2 - "FAHD2B,ANKRD36,LOC100506123" 3 "FAHD2B,ANKRD36,LOC100506123" 3 - - - "288904(30|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009),Mills(2006))" 791(1|Perry(2008)) 93 82 - 0 "288904(148|Ju(2010),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Itsara(2009),Pinto(2011),Jakobsson(2008),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401736BF male "research_filter, clinical_filter" OSBA52088 16 34466679 34755553 288875 Gain 3 0.884962 171 1699 chas 94.99 Gain 99.88 Gain 99.88 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 275818(1|Kidd(2008)) "288875(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "288875(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401617KM female "research_filter, clinical_filter" XTPE89033 4 3637461 3926333 288873 Gain 3 0.875926 208 1395 chas 5.36 Gain 0 - 0 - Gain-- 135 38.02 - BS "ChAS,IPN" 4p16.3 - "LOC100133461,ADRA2C" 2 "LOC100133461,ADRA2C" 2 ADRA2C - 103162(1|Giglio(2002)) "158666(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009))" "3698(12|Ahn(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Park(2010),Shaikh(2009))" 15 134 - 0 "288873(81|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Cooper(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400817MB male "research_filter, clinical_filter" KZTP77176 7 70301346 70590089 288744 Gain 3 0.897207 186 1560 chas 11.28 Gain 98.68 Gain 98.68 Gain GainGainGain 201 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.22 - - 0 - 0 - - "94940(6|Pang(2010),Feuk(2005),Ahn(2009),Kidd(2008))" "111525(21|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Park(2010),McCarroll(2008))" "1704(9|Levy(2007),Ahn(2009),Wheeler(2008),Bentley(2008))" - 201 - 0 "288744(137|Teague(2010),Ahn(2009),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Conrad(2009),Park(2010),Pinto(2011),Feuk(2005),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" TQQL83388 14 106560963 106849677 288715 Gain 3 0.900137 64 4582 chas 38.2 Gain 47.05 Gain 73.95 Gain GainGainGain 135 82.31 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" SBST92406 14 106560963 106849677 288715 Loss 1 0.907259 64 4582 chas 38.2 Loss 66.24 Loss 71.5 Loss LossLossLoss 135 70.39 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401926MR_1 male "research_filter, clinical_filter" HXGR62358 14 106560963 106849677 288715 Gain 3 0.89738 64 4582 chas 38.2 Gain 46.06 Gain 0 - GainGain- 135 61.36 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male "research_filter, clinical_filter" UBHC61833 14 106560963 106849677 288715 Loss 1 0.922084 64 4582 chas 38.2 Loss 71.5 Loss 80.61 Loss LossLossLoss 135 77.75 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" KHBO80872 14 106560963 106849677 288715 Gain 3 0.893305 64 4582 chas 38.2 Gain 72.96 Gain 0 - GainGain- 135 72.36 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400718PS male "research_filter, clinical_filter" XIWN71249 14 106560963 106849677 288715 Loss 1 0.896277 64 4582 chas 29.19 Loss 57.82 Loss 83.8 Loss LossLossLoss 135 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401935TM female "research_filter, clinical_filter" JPEZ22320 14 106560963 106849677 288715 Loss 1 0.921903 64 4582 chas 29.25 Loss 82.64 Loss 82.64 Loss LossLossLoss 135 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" CBBY76424 14 106560963 106849677 288715 Loss 1 0.909711 64 4582 chas 0 - 85.12 Loss 88.23 Loss #NAME? 135 NA NA NA "ChAS,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "288715(92|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 60 135 - 0 "288715(646|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401927SK female "research_filter, clinical_filter" FPLE23103 9 105710559 105999095 288537 Gain 3 0.895424 227 1276 chas 92.22 Gain 99.1 Gain 99.31 Gain GainGainGain 228 NA NA NA "ChAS,IPN,NXS,PTK" 9q31.1 - CYLC2 1 CYLC2 1 - - - "281006(8|Wang(2007),Matsuzaki(2009),Conrad(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 245(1|Wang(2008)) 1 228 - 0 "288537(35|Conrad(2009),Jakobsson(2008),Wang(2007),Kidd(2008),Itsara(2009),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" JUSU56143 2 236209084 236497137 288054 Gain 3 0.903008 204 1418 chas 91.67 Gain 96.28 Gain 100 Gain GainGainGain 201 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q37.2 - AGAP1 1 AGAP1 1 - - - "1568(2|Conrad(2009),McKernan(2009))" 300(1|Mills(2006)) - 201 AGAP1#asd_candidate 1 "251781(22|Conrad(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" FPHR45460 9 525291 813180 287890 Gain 3 0.898441 480 601 chas 95.35 "Gain,Loss" 98.72 Gain 99.99 Gain "Gain,LossGainGain" 409 99.84 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.3 - KANK1 1 KANK1 1 KANK1 - - "287890(57|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),McKernan(2009),Matsuzaki(2009),Altshuler(2010),Bentley(2008),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "3964(13|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),Pang(2010),Mills(2006))" - 409 - 0 "287890(165|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Conrad(2006),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" NCUZ14929 7 70302616 70590089 287474 Gain 3 0.899838 184 1570 chas 100 Gain 100 Gain 100 Gain GainGainGain 200 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.22 - - 0 - 0 - - "94940(6|Pang(2010),Feuk(2005),Ahn(2009),Kidd(2008))" "111525(21|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Park(2010),McCarroll(2008))" "1704(9|Levy(2007),Ahn(2009),Wheeler(2008),Bentley(2008))" - 200 - 0 "287474(137|Teague(2010),Ahn(2009),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Conrad(2009),Park(2010),Pinto(2011),Feuk(2005),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401111LH male "research_filter, clinical_filter" VUCC31552 16 32564736 32851881 287146 Loss 1 0.890074 14 22088 chas 0 - 0 - 0 - --- 61 27.39 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270384(1|Kidd(2008)) "287146(38|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 86 61 - 0 "287146(222|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400109LJ male - KXKI34745 16 32564736 32851881 287146 Loss 1 0.877525 14 22088 chas 0 - 0 - 0 - --- 61 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 270384(1|Kidd(2008)) "287146(38|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 86 61 - 0 "287146(222|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401994BD male - AVAH45014 2 97739019 98025634 286616 Loss 1 0.876914 56 5211 chas 91.89 Loss 0 - 100 Loss Loss-Loss 82 NA NA NA "ChAS,IPN,PTK" 2q11.2 - "FAHD2B,ANKRD36,LOC100506123" 3 "FAHD2B,ANKRD36,LOC100506123" 3 - - - "286616(30|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009),Mills(2006))" 791(1|Perry(2008)) 93 82 - 0 "286616(148|Ju(2010),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Itsara(2009),Pinto(2011),Jakobsson(2008),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" QITC50272 14 22682479 22969094 286616 Gain 3 0.86818 430 668 chas 0 - 0 - 0 - --- 245 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "286616(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 245 - 0 "286616(140|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401012TP female clinical_filter RVAL88696 2 83007236 83292681 285446 Loss 1 0.910817 156 1841 chas 98.1 Loss 96.12 Loss 99.05 Loss LossLossLoss 146 98.06 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p12 - LOC1720 1 LOC1720 1 - - - "131521(9|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Kidd(2008),Conrad(2009),Pinto(2007))" "1736(8|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Wheeler(2008))" 1 146 - 0 "189152(64|Sebat(2004),Itsara(2009),Ju(2010),Perry(2008),Conrad(2009),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Wang(2007),Pinto(2011),Redon(2006),Teague(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400353ML male "research_filter, clinical_filter" GUWW37548 16 34471298 34755816 284519 Gain 3 0.892076 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401195PN male "research_filter, clinical_filter" IPKK73915 16 34471298 34755816 284519 Gain 3 0.899756 172 1663 chas 100 Gain 99.84 Gain 99.84 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" NXEA90195 16 34471298 34755816 284519 Gain 3 0.897856 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" PSUS84601 16 34471298 34755816 284519 Gain 3 0.905546 172 1663 chas 100 Gain 99.84 Gain 99.84 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" KWJN47187 16 34471298 34755816 284519 Gain 3 0.892916 172 1663 chas 87.21 Gain 81.5 Gain 99.89 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" MTRE48443 16 34471298 34755816 284519 Gain 3 0.890985 172 1663 chas 100 Gain 99.79 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400378HL female "research_filter, clinical_filter" MTFT89424 16 34471298 34755816 284519 Gain 3 0.894602 172 1663 chas 100 Gain 100 Gain 99.78 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" CSHY74530 16 34471298 34755816 284519 Gain 3 0.887426 172 1663 chas 93.72 Gain 87.55 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" WHSN55625 16 34471298 34755816 284519 Gain 3 0.898512 172 1663 chas 99.73 Gain 86.44 Gain 95.48 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" GPXE42967 16 34471298 34755816 284519 Gain 3 0.900214 172 1663 chas 100 Gain 98.18 Gain 99.78 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400006DK female "research_filter, clinical_filter" BMGG13461 16 34471298 34755816 284519 Gain 3 0.90141 172 1663 chas 100 Gain 99.93 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400002HK female "research_filter, clinical_filter" XNUA56302 16 34471298 34755816 284519 Gain 3 0.896462 172 1663 chas 100 Gain 99.78 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" BTBU94149 16 34471298 34755816 284519 Gain 3 0.89801 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401177SL female "research_filter, clinical_filter" AZMC27188 16 34471298 34755816 284519 Gain 3 0.897586 172 1663 chas 93.72 Gain 91.24 Gain 99.84 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" USUN51593 16 34471298 34755816 284519 Gain 3 0.896726 172 1663 chas 99.73 Gain 93.68 Gain 99.89 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" OAZH14211 16 34471298 34755816 284519 Gain 3 0.8935 172 1663 chas 99.73 Gain 90.48 Gain 99.62 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400246MG male "research_filter, clinical_filter" PEZC72297 16 34471298 34755816 284519 Gain 3 0.891051 172 1663 chas 100 Gain 94.23 Gain 99.78 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" JWQI23251 16 34471298 34755816 284519 Gain 3 0.904135 172 1663 chas 100 Gain 99.93 Gain 99.93 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400247CL male "research_filter, clinical_filter" ZVRQ32621 16 34471298 34755816 284519 Gain 3 0.899196 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401176BD male "research_filter, clinical_filter" GQXG36971 16 34471298 34755816 284519 Gain 3 0.885546 172 1663 chas 100 Gain 86.92 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" HDQN23240 16 34471298 34755816 284519 Gain 3 0.899377 172 1663 chas 100 Gain 90.54 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400136DM female "research_filter, clinical_filter" VHVH83554 16 34471298 34755816 284519 Gain 3 0.892236 172 1663 chas 100 Gain 96.4 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" CBEA57280 16 34471298 34755816 284519 Gain 3 0.896631 172 1663 chas 100 Gain 99.78 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" LYLG55293 16 34471298 34755816 284519 Gain 3 0.88708 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" GNXG93257 16 34471298 34755816 284519 Gain 3 0.887251 172 1663 chas 100 Gain 89.76 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" PZCO50940 16 34471298 34755816 284519 Gain 3 0.898544 172 1663 chas 100 Gain 99.78 Gain 99.78 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" XDYS74119 16 34471298 34755816 284519 Gain 3 0.890991 172 1663 chas 100 Gain 99.93 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401019MP female "research_filter, clinical_filter" AXJJ81139 16 34471298 34755816 284519 Gain 3 0.897369 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400432VA male "research_filter, clinical_filter" KHBO80872 16 34471298 34755816 284519 Gain 3 0.894302 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400718PS male "research_filter, clinical_filter" UAZI16039 16 34471298 34755816 284519 Gain 3 0.896479 172 1663 chas 100 Gain 91.4 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400625FT male "research_filter, clinical_filter" QTRF59074 16 34471298 34755816 284519 Gain 3 0.89433 172 1663 chas 93.72 Gain 93.7 Gain 93.7 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" IGQR94047 16 34471298 34755816 284519 Gain 3 0.889958 172 1663 chas 100 Gain 77.71 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400060MC female "research_filter, clinical_filter" ORNW53006 16 34471298 34755816 284519 Gain 3 0.884348 172 1663 chas 100 Gain 50.5 Gain 100 Gain GainGainGain 170 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400494ML female "research_filter, clinical_filter" JHGL98054 16 34471298 34755816 284519 Gain 3 0.892101 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" MUBF17546 16 34471298 34755816 284519 Gain 3 0.891483 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400540BM male "research_filter, clinical_filter" BYSK29073 16 34471298 34755816 284519 Gain 3 0.901181 172 1663 chas 100 Gain 93.98 Gain 99.79 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" ZVON68408 16 34471298 34755816 284519 Gain 3 0.899107 172 1663 chas 100 Gain 100 Gain 99.93 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" VWYL75938 16 34471298 34755816 284519 Gain 3 0.905224 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401006ES female "research_filter, clinical_filter" IJCV29609 16 34471298 34755816 284519 Gain 3 0.8911 172 1663 chas 100 Gain 81.26 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" DZNQ84721 16 34471298 34755816 284519 Gain 4 0.946785 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400866RR male "research_filter, clinical_filter" BDQN41691 16 34471298 34755816 284519 Gain 3 0.892155 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401602PR male "research_filter, clinical_filter" MOBN67062 16 34471298 34755816 284519 Gain 3 0.886121 172 1663 chas 100 Gain 99.78 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400569WC female "research_filter, clinical_filter" UBGH15538 16 34471298 34755816 284519 Gain 3 0.888041 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" LMJA76842 16 34471298 34755816 284519 Gain 3 0.883827 172 1663 chas 100 Gain 96.48 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" NFNX93095 16 34471298 34755816 284519 Gain 3 0.890665 172 1663 chas 100 Gain 95.22 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401318AV female "research_filter, clinical_filter" YMWQ49708 16 34471298 34755816 284519 Gain 3 0.899105 172 1663 chas 100 Gain 99.96 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401403TD male "research_filter, clinical_filter" ZCOM63077 16 34471298 34755816 284519 Gain 3 0.889962 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401936BA male "research_filter, clinical_filter" ROAF64821 16 34471298 34755816 284519 Gain 3 0.89739 172 1663 chas 89.73 Gain 92.57 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" HARD47518 16 34471298 34755816 284519 Gain 3 0.888436 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" TABQ91013 16 34471298 34755816 284519 Gain 3 0.892179 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" WNMH95182 16 34471298 34755816 284519 Gain 3 0.89483 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" TDHB82208 16 34471298 34755816 284519 Gain 3 0.892383 172 1663 chas 89.13 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400923OA female "research_filter, clinical_filter" FYVR80369 16 34471298 34755816 284519 Gain 3 0.894547 172 1663 chas 100 Gain 91.4 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401448BJ male "research_filter, clinical_filter" TPDE39419 16 34471298 34755816 284519 Gain 3 0.900109 172 1663 chas 100 Gain 94.13 Gain 99.93 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401369GR male "research_filter, clinical_filter" YQRK14476 16 34471298 34755816 284519 Gain 3 0.885495 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" QBXB16173 16 34471298 34755816 284519 Gain 3 0.890052 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" ZHGO36222 16 34471298 34755816 284519 Gain 3 0.89336 172 1663 chas 96.53 Gain 96.48 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401135CS female "research_filter, clinical_filter" OAGJ33866 16 34471298 34755816 284519 Gain 3 0.891611 172 1663 chas 100 Gain 99.79 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" RXRT66436 16 34471298 34755816 284519 Gain 3 0.894691 172 1663 chas 100 Gain 99.78 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" UIPG73190 16 34471298 34755816 284519 Gain 3 0.889873 172 1663 chas 96.53 Gain 99.78 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401809FU female "research_filter, clinical_filter" PEOV46099 16 34471298 34755816 284519 Gain 3 0.885738 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401110GJ female "research_filter, clinical_filter" YHQC23155 16 34471298 34755816 284519 Gain 3 0.892363 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401906DT female "research_filter, clinical_filter" YPKU53656 16 34471298 34755816 284519 Gain 3 0.885337 172 1663 chas 96.53 Gain 99.93 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402022SM female "research_filter, clinical_filter" QVQY90814 16 34471298 34755816 284519 Gain 3 0.889175 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401311GL female "research_filter, clinical_filter" XOFJ42304 16 34471298 34755816 284519 Gain 3 0.894998 172 1663 chas 100 Gain 56.95 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400177CG male "research_filter, clinical_filter" DCUN59806 16 34471298 34755816 284519 Gain 3 0.90334 172 1663 chas 96.53 Gain 94.59 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" MFZY15027 16 34471298 34755816 284519 Gain 4 0.942313 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" XUUY89365 16 34471298 34755816 284519 Gain 3 0.892095 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" TBVD73320 16 34471298 34755816 284519 Gain 3 0.899269 172 1663 chas 96.53 Gain 99.96 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400712GC female "research_filter, clinical_filter" GSWW54097 16 34471298 34755816 284519 Gain 4 0.94954 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401620BA female "research_filter, clinical_filter" TZXJ50703 16 34471298 34755816 284519 Gain 3 0.889238 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" FGSE34256 16 34471298 34755816 284519 Gain 4 0.950189 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" QDNW53844 16 34471298 34755816 284519 Gain 3 0.885758 172 1663 chas 81.79 Gain 74.73 Gain 99.93 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" XOQW96687 16 34471298 34755816 284519 Gain 3 0.891119 172 1663 chas 80.5 Gain 61.94 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" PIAG15925 16 34471298 34755816 284519 Gain 4 0.929332 172 1663 chas 96.53 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400995MS female "research_filter, clinical_filter" EGYT92211 16 34471298 34755816 284519 Gain 3 0.894005 172 1663 chas 94.29 Gain 74.14 Gain 96.59 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401402EN male "research_filter, clinical_filter" RNZZ40210 16 34471298 34755816 284519 Gain 3 0.893428 172 1663 chas 94.29 Gain 91.38 Gain 84.28 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" VUND65965 16 34471298 34755816 284519 Gain 3 0.895796 172 1663 chas 100 Gain 91.4 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" KVGJ18529 16 34471298 34755816 284519 Gain 3 0.892317 172 1663 chas 82.32 Gain 80.78 Gain 80.78 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401636WR male "research_filter, clinical_filter" UJRA83281 16 34471298 34755816 284519 Gain 3 0.904168 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" IENJ56420 16 34471298 34755816 284519 Gain 3 0.88508 172 1663 chas 80.5 Gain 62.07 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401538NS female "research_filter, clinical_filter" SSWV37655 16 34471298 34755816 284519 Gain 3 0.890945 172 1663 chas 80.5 Gain 89.22 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401706BJ female "research_filter, clinical_filter" EGVC41637 16 34471298 34755816 284519 Gain 3 0.889518 172 1663 chas 100 Gain 96.59 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401939GD male "research_filter, clinical_filter" VIXQ67410 16 34471298 34755816 284519 Gain 3 0.89354 172 1663 chas 100 Gain 99.89 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" PTGD86385 16 34471298 34755816 284519 Gain 3 0.892402 172 1663 chas 100 Gain 99.6 Gain 99.6 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" TRVK84587 16 34471298 34755816 284519 Gain 3 0.889264 172 1663 chas 100 Gain 98.53 Gain 98.53 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401288LD male "research_filter, clinical_filter" IORF34772 16 34471298 34755816 284519 Gain 3 0.89578 172 1663 chas 89.13 Gain 91.01 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" UWAE35667 16 34471298 34755816 284519 Gain 4 0.939536 172 1663 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284519(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284519(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" JITZ20982 16 34471298 34755801 284504 Gain 3 0.88389 171 1673 chas 100 Gain 100 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 271199(1|Kidd(2008)) "284504(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 170 - 0 "284504(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401180GR male "research_filter, clinical_filter" FOMC40154 20 864765 1149183 284419 Gain 3 0.903279 284 1005 chas 99.76 Gain 99.88 Gain 99.62 Gain GainGainGain 239 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p13 - "PSMF1,ANGPT4,RSPO4" 3 "PSMF1,ANGPT4,RSPO4" 3 RSPO4 - - "19641(7|Wang(2007),McKernan(2009),Matsuzaki(2009),Conrad(2009))" "1393(5|Conrad(2009),Levy(2007),Bentley(2008),Mills(2006))" - 238 - 0 "171301(77|Teague(2010),Wang(2007),Conrad(2009),Itsara(2009),Banerjee(2011),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" WXKO33327 X 112575694 112860087 284394 Gain 3 0.897854 158 1811 chas 86.62 Gain 0 - 0 - Gain-- 186 NA NA NA "ChAS,IPN" Xq23 - - 0 - 0 - - - 284394(1|Shaikh(2009)) 129(1|Wheeler(2008)) - 186 - 0 "284394(20|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400496BL female "research_filter, clinical_filter" ABMS89106 6 168333308 168617512 284205 Gain 3 0.906545 278 1026 chas 69.07 Gain 81.28 Gain 96.27 Gain GainGainGain 200 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "284205(37|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),Itsara(2009),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 200 - 0 "284205(127|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401674DD male "research_filter, clinical_filter" XUQQ42504 9 11864430 12148632 284203 Loss 1 0.892971 183 1561 chas 91.93 Loss 88.14 Loss 98.32 Loss LossLossLoss 225 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "284203(53|Wang(2007),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 1 225 - 0 "284203(85|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Gusev(2009),Itsara(2009),Pinto(2011),Altshuler(2010),Conrad(2006),Durbin(2010),McCarroll(2006),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Campbell(2011),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401702GB male "research_filter, clinical_filter" EJLX27201 7 110999824 111283978 284155 Loss 1 0.912274 204 1399 chas 100 Loss 100 Loss 100 Loss LossLossLoss 163 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q31.1 - IMMP2L 1 IMMP2L 1 - - - "284155(33|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Altshuler(2010),Matsuzaki(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Simon-Sanchez(2007),McCarroll(2008))" "2038(8|Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008))" 1 163 - 0 "284155(72|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2010b),Pinto(2011),Pinto(2007),Shaikh(2009),Campbell(2011),Park(2010),Jakobsson(2008),Mills(2006),Kidd(2008),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400545EW_1 female "research_filter, clinical_filter" LLZZ76842 16 34471686 34755816 284131 Gain 3 0.885684 171 1671 chas 100 Gain 74.13 Gain 100 Gain GainGainGain 166 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 270811(1|Kidd(2008)) "284131(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 166 - 0 "284131(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400354TJ female "research_filter, clinical_filter" JPEZ22320 Y 5307651 5591775 284125 Gain 2 0.916474 180 1587 chas 98.42 Gain 0 - 0 - Gain-- 69 NA NA NA "ChAS,IPN" Yp11.2 - PCDH11Y 1 PCDH11Y 1 - - - - 361(1|Matsuzaki(2009)) 100 68 - 0 1858(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" UAYA68179 16 34471808 34755816 284009 Gain 3 0.887224 170 1680 chas 100 Gain 100 Gain 100 Gain GainGainGain 166 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 270689(1|Kidd(2008)) "284009(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 166 - 0 "284009(113|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401729AC female "research_filter, clinical_filter" NFPW24786 6 42695835 42979828 283994 Gain 3 0.903662 243 1173 chas 59.49 Gain 99.58 Gain 99.58 Gain GainGainGain 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p21.1 - "GNMT,PEX6,KIAA0240,TBCC,CNPY3,RPL7L1,PPP2R5D,PTCRA,ATP6V0CP3,C6orf226" 10 "GNMT,PEX6,KIAA0240,TBCC,CNPY3,RPL7L1,PPP2R5D,PTCRA,ATP6V0CP3,C6orf226" 10 "GNMT,PEX6" - - 1738(1|Park(2010)) 1(1|Levy(2007)) 2 116 - 0 "283994(21|Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Cooper(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" QEPL68818 1 248785482 249069190 283709 Gain 3 0.89578 100 2865 chas 97.48 Gain 100 Gain 100 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 150001(1|contig) "LOC646627,OR2T11,OR2T27,OR2T35,OR14I1" 5 "LOC646627,OR2T11,OR2T27,OR2T35,OR14I1" 5 - - 45060(1|Kidd(2008)) "283709(46|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" "3134(10|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Bentley(2008),Wheeler(2008))" 14 71 - 0 "98515(114|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Bentley(2008),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402028BD male "research_filter, clinical_filter" JVBB89605 16 32588892 32872263 283372 Loss 1 0.87761 18 16668 chas 0 - 0 - 100 Loss #NAME? 52 16.19 Loss "BS,IP6" "ChAS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "283372(46|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 94 51 - 0 "283372(231|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400650RM male research_filter LOAP92341 14 22686232 22969566 283335 Gain 3 0.870292 428 663 chas 0 - 44.84 Gain 76.47 Gain #NAME? 245 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "283335(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 245 - 0 "283335(139|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401554VN male "research_filter, clinical_filter" PNEQ37885 Y 20325644 20608555 282912 Gain 2 0.880256 128 2227 chas 98.8 Gain 0 - 0 - Gain-- 130 NA NA NA "ChAS,IPN" Yq11.222 - "FAM41AY1,LINC00230B,LINC00230A,FAM41AY2" 4 "FAM41AY1,LINC00230B,LINC00230A,FAM41AY2" 4 - "282912#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - - 1325(7|Matsuzaki(2009)) 100 130 - 0 "282912(5|Locke(2006),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" NOIN63241 14 22676929 22959362 282434 Loss 1 0.86251 440 643 chas 0 - 30.91 Loss 74.57 Loss #NAME? 234 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "282434(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 234 - 0 "282434(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400641WJ female "research_filter, clinical_filter" BWEV96807 14 22676929 22959279 282351 Loss 1 0.852797 439 644 chas 0 - 17.4 Loss 100 Loss #NAME? 232 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 506(1|Ahn(2009)) "282351(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 232 - 0 "282351(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 402012RR male "research_filter, clinical_filter" HGCG44121 14 22677247 22959555 282309 Loss 1 0.865931 439 644 chas 0 - 75.15 Loss 100 Loss #NAME? 235 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "282309(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 235 - 0 "282309(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" NOAU21003 17 57219391 57501604 282214 Gain 3 0.887789 208 1363 chas 33.47 Gain 77 Gain 70.23 Gain GainGainGain 132 92.94 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q22 - "PRR11,YPEL2,SMG8,MIR4729,MIR301A,SKA2,GDPD1" 7 "PRR11,YPEL2,SMG8,MIR4729,MIR301A,SKA2,GDPD1" 7 - - - "21279(5|Pang(2010),Conrad(2009),Matsuzaki(2009),Park(2010))" "2224(5|de Smith(2007),Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008))" 6 132 - 0 "282214(44|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Durbin(2010),Pang(2010),Park(2010),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400627CC female "research_filter, clinical_filter" WCXF39029 Y 25856645 26137793 281149 Loss 0 0.867074 48 5981 chas 100 Loss 0 - 0 - Loss-- 139 0 - - "ChAS,IPN" Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "281149#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "281149(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 139 - 0 "281149(5|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400788PV male "research_filter, clinical_filter" VUCC31552 Y 25856645 26137793 281149 Gain 2 0.863596 48 5981 chas 0 - 0 - 0 - --- 139 0 - - ChAS Yq11.223 - "TTTY3B,TTTY3" 2 "TTTY3B,TTTY3" 2 - "281149#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "281149(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 139 - 0 "281149(5|Locke(2006),McCarroll(2008),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400109LJ male - YWSA20061 16 32570986 32851881 280896 Loss 1 0.906292 12 25536 chas 0 - 0 - 0 - --- 57 22.71 Loss BS ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "280896(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "280896(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400101EH female - JSXF59945 16 32570986 32851881 280896 Loss 1 0.915189 12 25536 chas 0 - 0 - 0 - --- 57 22.66 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "280896(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "280896(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 401863BD_1 female - ERUW26412 16 32570986 32851881 280896 Loss 1 0.90884 12 25536 chas 0 - 0 - 0 - --- 57 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "280896(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "280896(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401308LD male - DCUN59806 16 32570986 32851881 280896 Loss 1 0.89502 12 25536 chas 0 - 0 - 0 - --- 57 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "280896(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "280896(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400316SL female - TUOI10912 16 32570986 32851881 280896 Loss 1 0.884696 12 25536 chas 0 - 0 - 0 - --- 57 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "280896(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 88 57 - 0 "280896(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401792KR male - GFOF72186 5 117740360 118020345 279986 Loss 1 0.927778 187 1505 chas 100 Loss 92.58 Loss 92.59 Loss LossLossLoss 211 99.95 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q23.1 - - 0 - 0 - - - "227113(11|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Simon-Sanchez(2007))" "1563(4|Pang(2010),Conrad(2009),Levy(2007))" - 211 - 0 "279986(68|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" ZRZC68152 6 168333308 168611331 278024 Gain 3 0.898593 276 1010 chas 85.08 Gain 85.67 Gain 90.09 Gain GainGainGain 197 93.75 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "278024(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 197 - 0 "278024(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400155CW male "research_filter, clinical_filter" YMWQ49708 6 168333308 168611331 278024 Gain 3 0.899717 276 1010 chas 92.29 Gain 98.41 Gain 98.41 Gain GainGainGain 197 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "278024(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 197 - 0 "278024(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401403TD male "research_filter, clinical_filter" QWII30838 6 168333308 168611331 278024 Gain 3 0.898363 276 1010 chas 78.06 Gain 85.68 Gain 99.41 Gain GainGainGain 197 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "278024(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 197 - 0 "278024(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402061PI female "research_filter, clinical_filter" EZDG77492 16 32570986 32848897 277912 Loss 1 0.892048 11 27791 chas 0 - 0 - 0 - --- 57 0 - - ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 264134(1|Kidd(2008)) "277912(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 87 53 - 0 "277912(219|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_no 400308SP male - YQHR22161 14 22682056 22959362 277307 Gain 3 0.869041 412 674 chas 0 - 37.51 Gain 100 Gain #NAME? 223 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "277307(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 223 - 0 "277307(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400845ML female "research_filter, clinical_filter" MFZZ13533 14 22682479 22959362 276884 Gain 3 0.866123 410 676 chas 0 - 0 - 0 - --- 223 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "276884(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 223 - 0 "276884(136|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400164SS male clinical_filter HBQS50118 14 22677187 22953607 276421 Gain 3 0.86703 434 638 chas 0 - 19.38 Gain 0 - -Gain- 230 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "276421(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 229 - 0 "276421(134|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400205SP_1 male "research_filter, clinical_filter" HHAT36498 14 22677187 22953607 276421 Loss 1 0.864515 434 638 chas 0 - 3.47 Loss 0 - -Loss- 230 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "276421(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 229 - 0 "276421(134|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400574MA female "research_filter, clinical_filter" TGWW40273 6 168336562 168611331 274770 Gain 3 0.894651 274 1006 chas 92.88 Gain 80 Gain 98.98 Gain GainGainGain 196 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "274770(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 196 - 0 "274770(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400140WM female "research_filter, clinical_filter" NCJU46793 1 113304345 113579103 274759 Gain 3 0.886432 236 1169 chas 85.69 Gain 95.87 Gain 96.52 Gain GainGainGain 162 99.26 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p13.2 - "SLC16A1,AKR7A2P1" 2 "SLC16A1,AKR7A2P1" 2 SLC16A1 - - "274759(9|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Levy(2007),McKernan(2009),Pang(2010))" "1269(3|Levy(2007),Matsuzaki(2009))" - 162 - 0 "274759(26|Conrad(2009),Pang(2010),Wang(2007),Levy(2007),McKernan(2009),Iafrate(2004),Durbin(2010),Kidd(2010),Wilson(2010),Pinto(2011),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" TKWO78971 6 168336617 168611331 274715 Gain 3 0.900747 272 1013 chas 93.4 Gain 89.71 Gain 98.94 Gain GainGainGain 196 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "274715(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 196 - 0 "274715(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401368WR male "research_filter, clinical_filter" XREB60973 6 168336617 168611331 274715 Gain 3 0.891518 272 1013 chas 70.95 Gain 94.47 Gain 94.47 Gain GainGainGain 196 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "274715(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 196 - 0 "274715(124|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" QSVT75164 16 34481454 34755816 274363 Gain 3 0.895886 168 1642 chas 100 Gain 100 Gain 100 Gain GainGainGain 158 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 261043(1|Kidd(2008)) "274363(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 3 158 - 0 "274363(110|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401791FG male "research_filter, clinical_filter" SEHC73357 X 61882087 62156262 274176 Gain 2 0.934056 246 1119 chas 100 Gain 0 - 0 - Gain-- 62 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "258081(6|Pang(2010),Wang(2007),Matsuzaki(2009),Shaikh(2009),Ju(2010))" - 0 61 - 0 "265654(9|Conrad(2009),Ju(2010),Wang(2007),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402019MC male "research_filter, clinical_filter" VLMR80827 16 32588892 32863035 274144 Loss 1 0.891055 14 21088 chas 0 - 0 - 0 - --- 50 19.87 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "274144(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "274144(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 401630MK female - GRYY36123 16 32588892 32863035 274144 Loss 1 0.882043 14 21088 chas 0 - 0 - 0 - --- 50 16.73 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "274144(39|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "274144(224|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 40031BA female - PGEB85888 2 31595345 31868877 273533 Gain 3 0.898106 333 823 chas 78.46 Gain 98.87 Gain 94.09 Gain GainGainGain 122 NA NA NA "ChAS,IPN,NXS,PTK" 2p23.1 - "SRD5A2,XDH" 2 "SRD5A2,XDH" 2 "SRD5A2,XDH" - - "26826(4|Pang(2010),Kidd(2008),McKernan(2009),Matsuzaki(2009))" 1801(8|Matsuzaki(2009)) - 121 - 0 "221529(23|Teague(2010),Kidd(2010b),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" FIIC23299 14 22686724 22959279 272556 Gain 3 0.868851 399 684 chas 0 - 8.1 Gain 91.13 Gain #NAME? 218 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 506(1|Ahn(2009)) "272556(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 218 - 0 "272556(135|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400843FL female "research_filter, clinical_filter" XDYS74119 21 18808980 19081476 272497 Gain 3 0.894342 264 1036 chas 97.37 Gain 98.68 Gain 98.68 Gain GainGainGain 228 97.34 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q21.1 - "C21orf37,BTG3,CXADR" 3 "C21orf37,BTG3,CXADR" 3 - - - "19203(5|Pang(2010),Kidd(2008),Conrad(2009),Shaikh(2009),Mills(2006))" 338(1|Bentley(2008)) 1 227 - 0 "96380(26|Teague(2010),Wong(2007),Conrad(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401019MP female "research_filter, clinical_filter" OVRI44012 6 168333308 168605743 272436 Gain 3 0.906264 274 997 chas 94.32 Gain 95.28 Gain 95.88 Gain GainGainGain 192 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "272436(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 192 - 0 "272436(122|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400083TG male "research_filter, clinical_filter" KXKI34745 6 168333308 168605743 272436 Gain 3 0.919965 274 997 chas 94.32 Gain 95.88 Gain 98.14 Gain GainGainGain 192 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "272436(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 192 - 0 "272436(122|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" NINK42890 6 168333308 168605633 272326 Gain 3 0.897814 273 1001 chas 79.12 Gain 86.8 Gain 99.4 Gain GainGainGain 192 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "272326(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 192 - 0 "272326(122|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" RMNM29531 9 71570080 71842391 272312 Gain 3 0.901684 444 614 chas 99.99 Gain 98.45 Gain 98.46 Gain GainGainGain 236 96.91 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9q21.11 - "TJP2,PIP5K1B,PRKACG,FXN" 4 "TJP2,PIP5K1B,PRKACG,FXN" 4 "TJP2,FXN" - - "119869(22|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Simon-Sanchez(2007))" "2786(15|Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Park(2010),Wheeler(2008),Mills(2006))" 1 236 PIP5K1B#asd_candidate 1 "272312(181|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Conrad(2009),Kidd(2008),Itsara(2009),Banerjee(2011),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Campbell(2011),Park(2010),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" CVWU93815 4 134918953 135191179 272227 Loss 1 0.916077 160 1712 chas 96.15 Loss 98.07 Loss 98.07 Loss LossLossLoss 129 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - PABPC4L 1 PABPC4L 1 - - - "272227(2|Zogopoulos(2007),Mills(2006))" "974(2|McKernan(2009),Bentley(2008))" - 129 - 0 "268852(16|Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401253MC female "research_filter, clinical_filter" VUND65965 4 134918953 135191179 272227 Loss 1 0.901301 160 1712 chas 98.13 Loss 87.09 Loss 98.07 Loss LossLossLoss 129 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - PABPC4L 1 PABPC4L 1 - - - "272227(2|Zogopoulos(2007),Mills(2006))" "974(2|McKernan(2009),Bentley(2008))" - 129 - 0 "268852(16|Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" SAHS24305 13 25736524 26008422 271899 Gain 3 0.889773 296 921 chas 100 Gain 100 Gain 100 Gain GainGainGain 190 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.13 - "ATP8A2,MTMR6,FAM123A,NUPL1" 4 "ATP8A2,MTMR6,FAM123A,NUPL1" 4 - - 271899(1|Korbel(2007)) "4061(3|Park(2010),McKernan(2009))" 987(1|Kim(2009)) 1 189 - 0 "271899(14|Teague(2010),Korbel(2007),McKernan(2009),Durbin(2010),Pang(2010),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" RAZI40834 20 8635914 8907448 271535 Gain 3 0.901277 386 705 chas 96.69 Gain 99.96 Gain 96.89 Gain GainGainGain 279 98.24 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.3 - PLCB1 1 PLCB1 1 PLCB1 - - 9342(1|Mills(2006)) "2(2|Levy(2007),Mills(2006))" - 279 - 0 "144211(18|Wong(2007),Redon(2006),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" DOUQ66820 2 35818834 36089472 270639 Loss 1 0.910839 218 1247 chas 100 Loss 100 Loss 100 Loss LossLossLoss 244 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "270639(29|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Shaikh(2009))" "1480(2|Conrad(2009),Perry(2008))" - 244 - 0 "270639(134|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Campbell(2011),Perry(2008b),Pinto(2011),Redon(2006),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" MTRE48443 X 61882087 62152176 270090 Gain 3 0.903513 244 1111 chas 94.57 Gain 0 - 0 - Gain-- 60 100 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "258081(6|Pang(2010),Wang(2007),Matsuzaki(2009),Shaikh(2009),Ju(2010))" - 0 60 - 0 "261568(9|Conrad(2009),Ju(2010),Wang(2007),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400378HL female "research_filter, clinical_filter" OWBB95825 22 25656221 25925641 269421 Gain 3 0.89098 78 3498 chas 68.46 Gain 92.62 Gain 92.14 Gain GainGainGain 320 94.55 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269421(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 320 - 0 "269421(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401275SJ male "research_filter, clinical_filter" ZRXE40373 22 25656237 25925641 269405 Gain 3 0.895948 77 3544 chas 68.44 Gain 97.5 Gain 97.29 Gain GainGainGain 320 94.56 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269405(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269405(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" OPOQ31165 22 25656238 25925641 269404 Gain 3 0.896736 76 3592 chas 68.46 Gain 93.36 Gain 93.49 Gain GainGainGain 320 97.13 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" NYDB63609 22 25656238 25925641 269404 Gain 3 0.896657 76 3592 chas 68.46 Gain 81.13 Gain 81.73 Gain GainGainGain 320 94.55 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400138LA female "research_filter, clinical_filter" AWAR79338 22 25656238 25925641 269404 Gain 3 0.903573 76 3592 chas 68.46 Gain 87.76 Gain 87.81 Gain GainGainGain 320 94.55 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" LHPN45961 22 25656238 25925641 269404 Gain 3 0.899498 76 3592 chas 68.46 Gain 91.96 Gain 92.1 Gain GainGainGain 320 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" GWFO72077 22 25656238 25925641 269404 Gain 3 0.90213 76 3592 chas 61.11 Gain 84.4 Gain 92.02 Gain GainGainGain 320 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" VHGW31501 22 25656238 25925641 269404 Gain 3 0.887601 76 3592 chas 23.7 Gain 63.24 Gain 96.18 Gain GainGainGain 320 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401819BS female "research_filter, clinical_filter" KKRR12131 22 25656238 25925641 269404 Gain 3 0.904322 76 3592 chas 68.46 Gain 93.35 Gain 93.35 Gain GainGainGain 320 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "269404(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 319 - 0 "269404(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" YZQJ34471 6 168336544 168605743 269200 Gain 3 0.904189 273 989 chas 95.45 Gain 95.11 Gain 98.72 Gain GainGainGain 191 96.35 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "269200(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 191 - 0 "269200(122|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400482MD male "research_filter, clinical_filter" WSYP96126 9 11879528 12148632 269105 Loss 1 0.919619 168 1611 chas 97.09 Loss 93.09 Loss 98.54 Loss LossLossLoss 216 97.09 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "269105(53|Wang(2007),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 1 216 - 0 "269105(81|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Gusev(2009),Itsara(2009),Pinto(2011),Altshuler(2010),Conrad(2006),Durbin(2010),McCarroll(2006),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Campbell(2011),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400660GK male "research_filter, clinical_filter" BTBU94149 22 25656238 25925187 268950 Gain 3 0.898517 74 3684 chas 68.58 Gain 83.15 Gain 93.51 Gain GainGainGain 318 94.71 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "268950(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 317 - 0 "268950(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401177SL female "research_filter, clinical_filter" LHPN45961 11 134476412 134745300 268889 Gain 3 0.905779 388 694 chas 95.96 Gain 97.89 Gain 99.73 Gain GainGainGain 274 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - - 0 - 0 - - - "268889(72|Wang(2007),Ahn(2009),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "7004(37|Conrad(2009),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010))" - 274 - 0 "268889(174|Teague(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" YTCX24219 22 25656238 25925078 268841 Gain 3 0.886024 73 3733 chas 5.43 Gain 40.95 Gain 97.87 Gain GainGainGain 317 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "268841(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 316 - 0 "268841(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" INSC49339 22 25656238 25925078 268841 Gain 3 0.904077 73 3733 chas 26.37 Gain 93.55 Gain 93.54 Gain GainGainGain 317 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "268841(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 73 316 - 0 "268841(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" GWFO72077 1 108769289 109038100 268812 Gain 3 0.892734 100 2715 chas 70.39 Gain 96.57 Gain 0 - GainGain- 76 NA NA NA "ChAS,IPN,NXS" 1p13.3 - "NBPF6,NBPF4" 2 "NBPF6,NBPF4" 2 - - 108883(1|Kidd(2008)) "268812(27|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Levy(2007),Kidd(2008),McCarroll(2008),Park(2010))" 126(1|Wheeler(2008)) 74 76 - 0 "268812(86|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" UUMD32389 16 34471298 34739571 268274 Gain 3 0.881583 164 1645 chas 72.7 Gain 56.23 Gain 82.17 Gain GainGainGain 164 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 268274(1|Kidd(2008)) "268274(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 2 164 - 0 "268274(108|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400609FJ male "research_filter, clinical_filter" VKGU19422 10 35023778 35291505 267728 Gain 3 0.894495 239 1124 chas 97.49 Gain 98.4 Gain 98.4 Gain GainGainGain 171 NA NA NA "ChAS,IPN,NXS,PTK" 10p11.21 - PARD3 1 PARD3 1 - - - "267728(8|Itsara(2009),Jakobsson(2008),Shaikh(2009),Mills(2006))" - - 170 - 0 "267728(29|Teague(2010),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400778SR female "research_filter, clinical_filter" JVBB89605 22 22311349 22578983 267635 Loss 1 0.91052 232 1158 chas 97.61 Loss 96.48 Loss 100 Loss LossLossLoss 456 96.74 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.22 - TOP3B 1 TOP3B 1 - "267635#3%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121,""22q11.2 distal deletion syndrome"":1580382" - "267635(56|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 4 456 - 0 "267635(219|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Pinto(2011),Wang(2007),Itsara(2009),Perry(2008b),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),Locke(2006),McKernan(2009),Kim(2009),McCarroll(2006),Simon-Sanchez(2007),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" BDAF16773 22 22311349 22578983 267635 Gain 3 0.891985 232 1158 chas 92.17 Gain 97.49 Gain 98.97 Gain GainGainGain 456 96.53 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.22 - TOP3B 1 TOP3B 1 - "267635#3%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121,""22q11.2 distal deletion syndrome"":1580382" - "267635(56|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 4 456 - 0 "267635(219|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Pinto(2011),Wang(2007),Itsara(2009),Perry(2008b),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),Locke(2006),McKernan(2009),Kim(2009),McCarroll(2006),Simon-Sanchez(2007),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" ROAF64821 22 22311349 22578983 267635 Gain 3 0.896498 232 1158 chas 97.61 Gain 96.99 Gain 97.88 Gain GainGainGain 456 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.22 - TOP3B 1 TOP3B 1 - "267635#3%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121,""22q11.2 distal deletion syndrome"":1580382" - "267635(56|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 4 456 - 0 "267635(219|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Pinto(2011),Wang(2007),Itsara(2009),Perry(2008b),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),Locke(2006),McKernan(2009),Kim(2009),McCarroll(2006),Simon-Sanchez(2007),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" YPPO84595 22 22311349 22578983 267635 Gain 3 0.911132 232 1158 chas 97.93 Gain 98.97 Gain 97.88 Gain GainGainGain 456 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.22 - TOP3B 1 TOP3B 1 - "267635#3%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121,""22q11.2 distal deletion syndrome"":1580382" - "267635(56|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 4 456 - 0 "267635(219|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Pinto(2011),Wang(2007),Itsara(2009),Perry(2008b),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),Locke(2006),McKernan(2009),Kim(2009),McCarroll(2006),Simon-Sanchez(2007),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" UCQK65306 16 34471298 34738780 267483 Gain 3 0.890176 162 1661 chas 87.11 Gain 100 Gain 100 Gain GainGainGain 161 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481" 2 "LOC283914,LOC146481" 2 - - 267483(1|Kidd(2008)) "267483(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 2 161 - 0 "267483(108|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" JPEZ22320 16 34471298 34738780 267483 Gain 3 0.89623 162 1661 chas 100 Gain 100 Gain 100 Gain GainGainGain 161 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481" 2 "LOC283914,LOC146481" 2 - - 267483(1|Kidd(2008)) "267483(40|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 2 161 - 0 "267483(108|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" QPLK48897 14 22677187 22944507 267321 Loss 1 0.853403 432 620 chas 0 - 0 - 0 - --- 224 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "267321(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 223 - 0 "267321(133|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401730MS male clinical_filter ILTL12466 3 141824150 142091460 267311 Gain 3 0.903523 212 1266 chas 99.98 Gain 99.99 Gain 99.99 Gain GainGainGain 119 98.21 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q23 - "GK5,TFDP2,XRN1" 3 "GK5,TFDP2,XRN1" 3 - - - "267311(9|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009))" "1170(2|Ahn(2009),Matsuzaki(2009))" - 119 - 0 "267311(26|Conrad(2009),Ahn(2009),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" LUVG84905 3 141818850 142085757 266908 Gain 3 0.886782 212 1264 chas 84.5 Gain 99.52 Gain 99.99 Gain GainGainGain 121 NA NA NA "ChAS,IPN,NXS,PTK" 3q23 - "GK5,TFDP2,XRN1" 3 "GK5,TFDP2,XRN1" 3 - - - "266908(9|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009))" "1170(2|Ahn(2009),Matsuzaki(2009))" - 121 - 0 "266908(27|Conrad(2009),Ahn(2009),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401664SD male "research_filter, clinical_filter" RNZZ40210 3 141818850 142085757 266908 Gain 3 0.90232 212 1264 chas 98.61 Gain 98.04 Gain 99.56 Gain GainGainGain 121 NA NA NA "ChAS,IPN,NXS,PTK" 3q23 - "GK5,TFDP2,XRN1" 3 "GK5,TFDP2,XRN1" 3 - - - "266908(9|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009))" "1170(2|Ahn(2009),Matsuzaki(2009))" - 121 - 0 "266908(27|Conrad(2009),Ahn(2009),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" YBSU20689 15 84827469 85094142 266674 Gain 3 0.907191 56 4848 chas 92.43 Gain 30.42 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 15q25.2 50001(1|contig) "UBE2Q2P1,LOC100505679,DNM1P41,LOC440300,GOLGA6L5,LOC388152" 6 "UBE2Q2P1,LOC100505679,DNM1P41,LOC440300,GOLGA6L5,LOC388152" 6 - - "59475(2|Kidd(2008),Tuzun(2005))" "266674(36|Park(2010),Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 81 42 - 0 "266674(86|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Tuzun(2005),Durbin(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" NEPL50430 15 84827469 85094142 266674 Gain 3 0.880245 56 4848 chas 0 - 0 - 0 - --- 42 0 - - ChAS 15q25.2 50001(1|contig) "UBE2Q2P1,LOC100505679,DNM1P41,LOC440300,GOLGA6L5,LOC388152" 6 "UBE2Q2P1,LOC100505679,DNM1P41,LOC440300,GOLGA6L5,LOC388152" 6 - - "59475(2|Kidd(2008),Tuzun(2005))" "266674(36|Park(2010),Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 81 42 - 0 "266674(86|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Tuzun(2005),Durbin(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 401084BD male clinical_filter FUTH67903 14 22676929 22943573 266645 Gain 3 0.874538 432 618 chas 0 - 94.32 Gain 100 Gain #NAME? 221 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "266645(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 221 - 0 "266645(131|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401874DJ male "research_filter, clinical_filter" HARD47518 17 20413550 20680109 266560 Gain 3 0.875022 122 2202 chas 75.01 Gain 83.25 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - CDRT15L2 1 CDRT15L2 1 - "68512#2%""Smith-Magenis Syndrome"":3776041,""Potocki-Lupski syndrome (17p11.2 duplication syndrome)"":3776041" - "266560(30|Conrad(2009),Perry(2008),Matsuzaki(2009),McKernan(2009),Bentley(2008),Pinto(2007),Park(2010))" "2549(12|Perry(2008),Matsuzaki(2009),de Smith(2007),Levy(2007),Bentley(2008),Wang(2008))" 93 92 - 0 "266560(70|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Alkan(2009),McKernan(2009),Wang(2008),Park(2010),Bentley(2008),Pinto(2011),Durbin(2010),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Itsara(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" ETUR65669 Y 6172723 6439225 266503 Gain 2 0.874542 127 2115 chas 96.33 Gain 0 - 0 - Gain-- 105 NA NA NA "ChAS,IPN" Yp11.2 - "TTTY2,TTTY1,TTTY7B,TTTY7,TTTY8B,TTTY8,TTTY2B,TTTY1B,TTTY21,TTTY21B" 10 "TTTY2,TTTY1,TTTY7B,TTTY7,TTTY8B,TTTY8,TTTY2B,TTTY1B,TTTY21,TTTY21B" 10 - - - - - 100 105 - 0 "266503(6|Locke(2006),Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" TRUE TRUE ipn_yes algo_yes NA 401056TJ male "research_filter, clinical_filter" TRLD69151 22 25656221 25922334 266114 Gain 3 0.913784 74 3645 chas 69.28 Gain 96.01 Gain 96.01 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266114(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 312 - 0 "266114(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401514BA male "research_filter, clinical_filter" WZBZ52169 22 25656237 25922334 266098 Gain 3 0.895624 73 3695 chas 69.31 Gain 94.77 Gain 97.52 Gain GainGainGain 313 95.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266098(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266098(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401619BT female "research_filter, clinical_filter" ZSEZ81141 22 25656237 25922334 266098 Gain 3 0.898649 73 3695 chas 69.31 Gain 94.66 Gain 94.6 Gain GainGainGain 313 96.71 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266098(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266098(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" GYNG28087 22 25656238 25922334 266097 Gain 3 0.899869 72 3747 chas 69.15 Gain 95.18 Gain 97.52 Gain GainGainGain 313 95.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" XUEP99389 22 25656238 25922334 266097 Gain 3 0.892971 72 3747 chas 69.31 Gain 97.37 Gain 98.88 Gain GainGainGain 313 97.09 "Gain,-" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" QCXI89270 22 25656238 25922334 266097 Loss 1 0.938893 72 3747 chas 69.31 Loss 93.25 Loss 93.24 Loss LossLossLoss 313 95.73 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" EGQB52790 22 25656238 25922334 266097 Loss 1 0.930592 72 3747 chas 69.31 Loss 96.02 Loss 96.01 Loss LossLossLoss 313 97.95 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" SKLJ58672 22 25656238 25922334 266097 Gain 3 0.91401 72 3747 chas 69.31 Gain 97.52 Gain 97.52 Gain GainGainGain 313 95.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" VKJV88264 22 25656238 25922334 266097 Gain 3 0.907962 72 3747 chas 69.31 Gain 78.96 Gain 86.77 Gain GainGainGain 313 95.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" RVAL88696 22 25656238 25922334 266097 Loss 1 0.915496 72 3747 chas 69.31 Loss 93.3 Loss 93.9 Loss LossLossLoss 313 97.95 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400353ML male "research_filter, clinical_filter" MGJJ89085 22 25656238 25922334 266097 Loss 1 0.924067 72 3747 chas 69.31 Loss 92.05 Loss 92.63 Loss LossLossLoss 313 95.73 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" WUVU37744 22 25656238 25922334 266097 Loss 1 0.920718 72 3747 chas 69.31 Loss 94.51 Loss 94.51 Loss LossLossLoss 313 95.73 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" UBHC61833 22 25656238 25922334 266097 Gain 3 0.907601 72 3747 chas 69.15 Gain 78.21 Gain 93.68 Gain GainGainGain 313 97.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" ISXJ62958 22 25656238 25922334 266097 Gain 4 0.951122 72 3747 chas 69.31 Gain 97.52 Gain 96.01 Gain GainGainGain 313 95.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" ORXL21407 22 25656238 25922334 266097 Loss 1 0.9116 72 3747 chas 69.29 Loss 91.57 Loss 94.74 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402064DC male "research_filter, clinical_filter" JHGL98054 22 25656238 25922334 266097 Loss 1 0.93157 72 3747 chas 69.31 Loss 94.74 Loss 96.24 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" VOAZ29383 22 25656238 25922334 266097 Loss 1 0.919277 72 3747 chas 69.31 Loss 96.02 Loss 95.27 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400834SS female "research_filter, clinical_filter" IWPA56866 22 25656238 25922334 266097 Loss 1 0.931157 72 3747 chas 69.31 Loss 93.42 Loss 93.43 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401700BN_1 female "research_filter, clinical_filter" KXKI34745 22 25656238 25922334 266097 Gain 3 0.900429 72 3747 chas 69.31 Gain 94.51 Gain 96.51 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" BXCR78538 22 25656238 25922334 266097 Gain 3 0.900651 72 3747 chas 62.04 Gain 93.23 Gain 93.23 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401050GS female "research_filter, clinical_filter" QYVK49015 22 25656238 25922334 266097 Loss 1 0.922981 72 3747 chas 69.31 Loss 93.34 Loss 93.33 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" BWEV96807 22 25656238 25922334 266097 Gain 3 0.900137 72 3747 chas 69.29 Gain 93.91 Gain 93.9 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402012RR male "research_filter, clinical_filter" GHOG89686 22 25656238 25922334 266097 Gain 3 0.901003 72 3747 chas 69.29 Gain 86.16 Gain 94.74 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401459HF male "research_filter, clinical_filter" IUXY17884 22 25656238 25922334 266097 Loss 1 0.914165 72 3747 chas 69.29 Loss 82.74 Loss 92.64 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401238QR male "research_filter, clinical_filter" ZBJH32901 22 25656238 25922334 266097 Loss 1 0.929077 72 3747 chas 69.31 Loss 97.52 Loss 97.52 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401900RJ female "research_filter, clinical_filter" SMGW17663 22 25656238 25922334 266097 Loss 1 0.919795 72 3747 chas 69.31 Loss 96.02 Loss 96.01 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" QRNV11451 22 25656238 25922334 266097 Gain 3 0.900886 72 3747 chas 26.74 Gain 97.04 Gain 97.52 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" ZNRO68615 22 25656238 25922334 266097 Loss 1 0.92484 72 3747 chas 69.31 Loss 82.74 Loss 92.63 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401862AN male "research_filter, clinical_filter" OZXZ40778 22 25656238 25922334 266097 Loss 1 0.935664 72 3747 chas 69.29 Loss 93.68 Loss 93.68 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" BTMS28214 22 25656238 25922334 266097 Gain 3 0.91347 72 3747 chas 69.31 Gain 78.58 Gain 97.52 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" DQHB62647 22 25656238 25922334 266097 Gain 3 0.903378 72 3747 chas 69.29 Gain 93.24 Gain 96.25 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401732HW male "research_filter, clinical_filter" JWHR52164 22 25656238 25922334 266097 Gain 3 0.900318 72 3747 chas 26.64 Gain 60.51 Gain 92.63 Gain GainGainGain 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400984LD female "research_filter, clinical_filter" UCQK65306 22 25656238 25922334 266097 Loss 1 0.923772 72 3747 chas 69.31 Loss 84.84 Loss 93.23 Loss LossLossLoss 313 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" CSHY74530 22 25656238 25922334 266097 Gain 3 0.885201 72 3747 chas 0 - 0 - 62.69 Gain #NAME? 313 97.09 Gain "BS,GTC,IP6" "ChAS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "266097(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 311 - 0 "266097(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" RBBO63662 14 22678503 22944507 266005 Gain 3 0.872017 420 634 chas 0 - 86.44 Gain 100 Gain #NAME? 219 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "266005(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 219 - 0 "266005(133|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401105WS male "research_filter, clinical_filter" FPLE23103 3 141821163 142085757 264595 Gain 3 0.9032 210 1266 chas 99.47 Gain 100 Gain 99.38 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 3q23 - "GK5,TFDP2,XRN1" 3 "GK5,TFDP2,XRN1" 3 - - - "264595(9|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009))" "1170(2|Ahn(2009),Matsuzaki(2009))" - 118 - 0 "264595(26|Conrad(2009),Ahn(2009),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" NQBM70678 16 21576803 21841354 264552 Loss 1 0.934554 180 1477 chas 59.95 Loss 54.63 Loss 92.7 Loss LossLossLoss 127 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p12.2 - "METTL9,IGSF6,RRN3P1,OTOA" 4 "METTL9,IGSF6,RRN3P1,OTOA" 4 OTOA "227399#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" "263540(6|Pang(2010),Kidd(2008),Korbel(2007),Tuzun(2005))" "264552(32|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),Jakobsson(2008),McKernan(2009),McCarroll(2008),Kim(2009),Zogopoulos(2007))" 855(1|Conrad(2009)) 38 127 - 0 "264552(186|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400084DM female "research_filter, clinical_filter" EJVQ96131 14 22686232 22950491 264260 Loss 1 0.860084 401 660 chas 0 - 3.3 Loss 0 - -Loss- 218 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "264260(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 218 - 0 "264260(133|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400738WM female "research_filter, clinical_filter" LMJA76842 22 22315093 22578983 263891 Gain 3 0.895173 228 1162 chas 90.35 Gain 92.64 Gain 98.87 Gain GainGainGain 456 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.22 - TOP3B 1 TOP3B 1 - "263891#3%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121,""22q11.2 distal deletion syndrome"":1580382" - "263891(55|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 4 455 - 0 "263891(217|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Pinto(2011),Teague(2010),Itsara(2009),Perry(2008b),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Shaikh(2009),Park(2010),Locke(2006),McKernan(2009),Kim(2009),McCarroll(2006),Simon-Sanchez(2007),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" FPHR45460 16 32588892 32851881 262990 Loss 1 0.894727 10 29221 chas 0 - 1.64 Loss 0 - -Loss- 50 17.44 Loss "BS,IP6" "ChAS,NXS" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 401104DM female research_filter GQSZ37539 16 32588892 32851881 262990 Loss 1 0.905116 10 29221 chas 0 - 1.14 Loss 0 - -Loss- 50 25.34 "Loss,-" "BS,IP6" "ChAS,NXS" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400455SJ female research_filter WGSV83254 16 32588892 32851881 262990 Loss 1 0.894355 10 29221 chas 0 - 0 - 100 Loss #NAME? 50 NA NA NA "ChAS,PTK" 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401733CG male research_filter NSZE63198 16 32588892 32851881 262990 Loss 1 0.898377 10 29221 chas 0 - 0 - 0 - --- 50 17.44 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400724CD male - GZBA26596 16 32588892 32851881 262990 Loss 1 0.915369 10 29221 chas 0 - 0 - 0 - --- 50 17.44 Loss IP6 ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400150SS female - OLST13930 16 32588892 32851881 262990 Loss 1 0.904307 10 29221 chas 0 - 0 - 0 - --- 50 17.44 Loss "BS,IP6" ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400007RG female - BYSK29073 16 32588892 32851881 262990 Loss 1 0.910925 10 29221 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400620MT male - OWWC21327 16 32588892 32851881 262990 Loss 1 0.904504 10 29221 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400547BS female - GLGF34868 16 32588892 32851881 262990 Loss 1 0.905089 10 29221 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401268PS male - YOPA81411 16 32588892 32851881 262990 Loss 1 0.905166 10 29221 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 402056KD male - LYLV54353 16 32588892 32851881 262990 Loss 1 0.89736 10 29221 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 16p11.2 - "LOC653550,TP53TG3B,TP53TG3" 3 "LOC653550,TP53TG3B,TP53TG3" 3 - - 246228(1|Kidd(2008)) "262990(37|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 1107(2|Perry(2008)) 93 50 - 0 "262990(213|Sebat(2004),Korbel(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 401506LK male - KRCX57170 11 55780469 56043455 262987 Loss 1 0.902438 320 824 chas 100 Loss 94.03 Loss 100 Loss LossLossLoss 175 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q12.1 - "OR5J2,OR8H2,OR8H3,OR8I2,OR5T1,OR5T3,OR5T2,OR8J3,OR8K5,OR5AS1" 10 "OR5J2,OR8H2,OR8H3,OR8I2,OR5T1,OR5T3,OR5T2,OR8J3,OR8K5,OR5AS1" 10 - - - "126428(26|Sebat(2004),Jakobsson(2008),Conrad(2005),Matsuzaki(2009),Pinto(2007),Redon(2006),Shaikh(2009))" "1495(9|Levy(2007),Matsuzaki(2009))" 8 175 - 0 "262987(23|Sebat(2004),Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),Pinto(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" QVOH35939 6 67706386 67968844 262459 Gain 3 0.89897 194 1359 chas 96.57 Gain 93.3 Gain 100 Gain GainGainGain 256 NA NA NA "ChAS,IPN,NXS,PTK" 6q12 - - 0 - 0 - - - "46419(6|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Matsuzaki(2009),Shaikh(2009))" "1178(2|Wheeler(2008),McKernan(2009))" 1 256 - 0 "262459(46|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Conrad(2006),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" IBGK33359 14 22682537 22944507 261971 Gain 3 0.870155 404 650 chas 0 - 0.62 Gain 0 - -Gain- 214 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "261971(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 214 - 0 "261971(133|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401503MJ male "research_filter, clinical_filter" PGEB85888 4 3909534 4171323 261790 Gain 3 0.881371 80 3313 chas 5.23 Gain 0 - 0 - Gain-- 84 NA NA NA "ChAS,IPN" 4p16.3 - FAM86EP 1 FAM86EP 1 - - 261790(1|Giglio(2002)) "261790(18|Conrad(2009),Perry(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),Shaikh(2009))" "600(6|Levy(2007),Bentley(2008))" 100 83 - 0 "261790(63|Teague(2010),Redon(2006),Perry(2008),Kidd(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Locke(2006),Conrad(2009),Kidd(2010b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" JKIG25467 14 22676929 22938641 261713 Gain 3 0.86552 412 636 chas 0 - 85.16 Gain 100 Gain #NAME? 210 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "261713(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 210 - 0 "261713(128|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400645KM male "research_filter, clinical_filter" UJRA83281 13 24767820 25029401 261582 Gain 3 0.900599 308 852 chas 76.88 Gain 83.98 Gain 97.21 Gain GainGainGain 209 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.12 - "SPATA13,PARP4,C1QTNF9" 3 "SPATA13,PARP4,C1QTNF9" 3 - - - "240918(22|Conrad(2009),Pinto(2007),Redon(2006),Matsuzaki(2009),Simon-Sanchez(2007))" "2167(4|Conrad(2009),Levy(2007),Matsuzaki(2009))" 54 209 - 0 "261582(28|Conrad(2009),Wong(2007),Redon(2006),Wang(2008),Durbin(2010),Itsara(2009),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" YKLI59783 10 75999133 76260707 261575 Loss 1 0.908776 280 937 chas 100 Loss 95.55 Loss 99.27 Loss LossLossLoss 124 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q22.2 - ADK 1 ADK 1 ADK - - "261575(4|Itsara(2009),Gusev(2009),McKernan(2009),Shaikh(2009))" - - 124 - 0 "261575(10|Kidd(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" UXJM82913 2 97900818 98162176 261359 Gain 3 0.886474 32 8430 chas 9 Gain 12.92 Gain 0 - GainGain- 30 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36,ANKRD36B,LOC100506123" 3 "ANKRD36,ANKRD36B,LOC100506123" 3 - - - "261359(21|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009))" "1425(3|Conrad(2009),Perry(2008))" 95 30 - 0 "261359(80|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401359HF male research_filter YKSB12189 1 49477345 49738282 260938 Loss 1 0.912855 196 1338 chas 100 Loss 100 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 AGBL4 1 - - - 6518(1|Kim(2009)) "1203(3|Conrad(2009),Levy(2007),Matsuzaki(2009))" - 114 - 0 "183932(13|Conrad(2009),Wong(2007),Levy(2007),Durbin(2010),Kidd(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401390DG male "research_filter, clinical_filter" UJRA83281 6 168332233 168593036 260804 Gain 3 0.908604 272 962 chas 98.34 Gain 98.97 Gain 100 Gain GainGainGain 186 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "260804(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 186 - 0 "260804(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" RBTV68848 Y 22228627 22489344 260718 Loss 0 0.840759 48 5547 chas 0 - 0 - 0 - --- 22 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "260718#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "260718(3|Levy(2007),Perry(2008),Bentley(2008))" 10(10|Levy(2007)) - 22 - 0 "260718(19|Levy(2007),Durbin(2010),Perry(2008),Bentley(2008))" TRUE TRUE ipn_no algo_no NA 401182OC male clinical_filter BTJZ41884 14 22677543 22938211 260669 Loss 1 0.859779 400 653 chas 0 - 0 - 0 - --- 206 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "260669(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 206 - 0 "260669(128|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 400068PW female clinical_filter JUSU56143 2 237143820 237404435 260616 Gain 3 0.897357 236 1109 chas 95.72 Gain 96.83 Gain 98.54 Gain GainGainGain 135 97.29 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "2q37.3,2q37.2" - "ASB18,IQCA1" 2 "ASB18,IQCA1" 2 - - - "59540(2|de Smith(2007),Park(2010))" "1224(3|Park(2010),Conrad(2009),Levy(2007))" 1 134 - 0 "131146(32|Conrad(2009),Wong(2007),Pinto(2011),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),De(Smith_2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" YYJA27879 6 168332453 168593036 260584 Gain 3 0.908218 269 972 chas 97.94 Gain 98.41 Gain 99.05 Gain GainGainGain 185 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "260584(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 185 - 0 "260584(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401074CM_1 female "research_filter, clinical_filter" AMDW97336 6 168332453 168593036 260584 Gain 3 0.906565 269 972 chas 98.43 Gain 99.05 Gain 99.05 Gain GainGainGain 185 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "260584(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 185 - 0 "260584(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401281BP male "research_filter, clinical_filter" QAGW25123 1 195736926 195997281 260356 Loss 1 0.925831 204 1282 chas 98.47 Loss 97.24 Loss 98.17 Loss LossLossLoss 220 96.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.3 - - 0 - 0 - - - "191091(13|Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009))" "1402(2|Park(2010),Shaikh(2009))" - 220 - 0 "206554(34|Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Park(2010),Pinto(2007),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" UXJM82913 Y 22229119 22489344 260226 Loss 0 0.872306 46 5782 chas 0 - 0 - 0 - --- 22 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "260226#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "260226(3|Levy(2007),Perry(2008),Bentley(2008))" 10(10|Levy(2007)) - 22 - 0 "260226(19|Levy(2007),Durbin(2010),Perry(2008),Bentley(2008))" TRUE TRUE ipn_no algo_no NA 401359HF male clinical_filter APOV19283 1 145625611 145885646 260036 Gain 3 0.899271 149 1757 chas 51.79 Gain 66.12 Gain 89.18 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.1 50001(1|clone) "CD160,GPR89C,RNF115,GPR89A,PDZK1" 5 "CD160,GPR89C,RNF115,GPR89A,PDZK1" 5 - "260036#1%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871" 53673(1|Korbel(2007)) "260036(10|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009))" - 34 61 GPR89A#asd_candidate 1 "260036(26|Wang(2007),Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Perry(2008b),Locke(2006),Jakobsson(2008),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" YQRK14476 3 3977156 4237101 259946 Loss 1 0.90441 176 1485 chas 94.62 Loss 97.3 Loss 97.31 Loss LossLossLoss 251 NA NA NA "ChAS,IPN,NXS,PTK" "3p26.1,3p26.2" - - 0 - 0 - - - "243841(42|Conrad(2009),Ahn(2009),McKernan(2009),Redon(2006),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Matsuzaki(2009),Bentley(2008),Pang(2010),Wang(2008),Pinto(2007),McCarroll(2008),McCarroll(2005),Jakobsson(2008),Wheeler(2008),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "830(2|Conrad(2009),Levy(2007))" 1 251 - 0 "259946(91|Teague(2010),Redon(2006),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Wilson(2010),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" BDYF88242 6 168333308 168593036 259729 Gain 3 0.904576 268 972 chas 97.43 Gain 99.38 Gain 100 Gain GainGainGain 183 99.24 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "259729(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 183 - 0 "259729(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" GDZR23108 6 168333308 168593036 259729 Gain 3 0.906484 268 972 chas 81.73 Gain 98.75 Gain 99.37 Gain GainGainGain 183 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "259729(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 183 - 0 "259729(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400375KA female "research_filter, clinical_filter" TRLD69151 6 168333308 168593036 259729 Gain 3 0.912158 268 972 chas 98.75 Gain 100 Gain 100 Gain GainGainGain 183 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "259729(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 183 - 0 "259729(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401514BA male "research_filter, clinical_filter" YDIQ26421 6 168333308 168593036 259729 Gain 3 0.903287 268 972 chas 98.64 Gain 98.68 Gain 98.68 Gain GainGainGain 183 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "259729(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 183 - 0 "259729(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401591BE female "research_filter, clinical_filter" JSHH93314 1 108769289 109028735 259447 Gain 3 0.885459 96 2731 chas 35.78 Gain 84.73 Gain 0 - GainGain- 73 NA NA NA "ChAS,IPN,NXS" 1p13.3 - "NBPF6,NBPF4" 2 "NBPF6,NBPF4" 2 - - 108883(1|Kidd(2008)) "259447(27|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Levy(2007),Kidd(2008),McCarroll(2008),Park(2010))" 126(1|Wheeler(2008)) 76 73 - 0 "259447(86|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" WGSV83254 8 2330754 2589993 259240 Gain 3 0.910314 200 1302 chas 86.99 Gain 98.67 Gain 94.3 Gain GainGainGain 219 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - 12751(2|Pang(2010)) "259240(23|Conrad(2009),Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "2135(6|Wang(2008),Conrad(2009),Pang(2010),Shaikh(2009),Mills(2006))" 5 219 - 0 "259240(70|Teague(2010),Durbin(2010),Redon(2006),Wang(2008),Pinto(2011),Sharp(2005),Itsara(2009),McKernan(2009),Wilson(2010),Locke(2006),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Jakobsson(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" AQKH94698 7 10398207 10655852 257646 Loss 1 0.911728 165 1571 chas 98.63 Loss 99.27 Loss 99.27 Loss LossLossLoss 163 98.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.3 - - 0 - 0 - - - "78400(12|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),McKernan(2009),Bentley(2008),Pang(2010),Shaikh(2009),Mills(2006))" "856(2|Levy(2007),Ahn(2009))" 1 163 - 0 "169045(47|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" LWHQ31793 14 22686232 22943736 257505 Gain 3 0.869788 398 648 chas 0 - 7.81 Gain 0 - -Gain- 212 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "257505(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 212 - 0 "257505(130|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401353BC male "research_filter, clinical_filter" RWTQ90156 9 9331657 9588828 257172 Loss 1 0.919048 334 772 chas 97.99 Loss 98.8 Loss 98.8 Loss LossLossLoss 260 98.67 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - PTPRD 1 PTPRD 1 - - - "213171(4|Park(2010),Shaikh(2009),Zogopoulos(2007))" 1551(2|Conrad(2009)) - 260 - 0 "208941(22|Conrad(2009),Pinto(2011),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" KKFR54086 14 22686724 22943573 256850 Loss 1 0.852228 392 656 chas 0 - 0 - 0 - --- 207 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "256850(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 207 - 0 "256850(130|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401443JK male clinical_filter WVDE74465 6 168336544 168593036 256493 Gain 4 0.944831 267 964 chas 100 Gain 100 Gain 100 Gain GainGainGain 182 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256493(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256493(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401838EN male "research_filter, clinical_filter" RPJZ72910 6 168336544 168593036 256493 Gain 3 0.901938 267 964 chas 100 Gain 100 Gain 100 Gain GainGainGain 182 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256493(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256493(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401395OP male "research_filter, clinical_filter" ICDL89338 6 168336562 168593036 256475 Gain 3 0.903703 266 967 chas 99.5 Gain 92.22 Gain 99.99 Gain GainGainGain 182 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256475(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256475(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" RCQQ88896 6 168336562 168593036 256475 Gain 3 0.905499 266 967 chas 99.86 Gain 99.87 Gain 99.87 Gain GainGainGain 182 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256475(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256475(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" IDVO19613 6 168336602 168593036 256435 Gain 3 0.898352 265 971 chas 62.47 Gain 97.03 Gain 97.03 Gain GainGainGain 182 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256435(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256435(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401434VN female "research_filter, clinical_filter" IFQR85921 6 168336617 168593036 256420 Gain 4 0.939018 264 974 chas 99.53 Gain 100 Gain 99.95 Gain GainGainGain 182 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "256420(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2989(13|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 182 - 0 "256420(121|Ju(2010),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400835FD female "research_filter, clinical_filter" KEHV72339 8 130872538 131128902 256365 Gain 3 0.906937 202 1275 chas 97.55 Gain 98.78 Gain 98.78 Gain GainGainGain 122 97.56 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.21 - "LOC100507117,ASAP1,FAM49B" 3 "LOC100507117,ASAP1,FAM49B" 3 - - - "2958(4|Pang(2010),Conrad(2009),Ju(2010),Mills(2006))" "277(8|Levy(2007),Mills(2006))" - 122 - 0 "256365(41|Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" NCJU46793 11 50306193 50562391 256199 Gain 3 0.904979 88 2944 chas 23.04 Gain 92.65 Gain 92.65 Gain GainGainGain 57 85.31 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 11p11.12 - LOC646813 1 LOC646813 1 - - 74784(1|Kidd(2008)) "256199(16|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" 603(1|Wang(2008)) 13 57 - 0 "256199(73|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" PTKC28903 15 28659911 28915864 255954 Loss 1 0.919276 10 28439 chas 0 - 22.15 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 15q13.1 - "HERC2P9,GOLGA8G,GOLGA8F,MIR4509-2,MIR4509-3,MIR4509-1" 6 "HERC2P9,GOLGA8G,GOLGA8F,MIR4509-2,MIR4509-3,MIR4509-1" 6 - - - "250828(39|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Cooper(2008))" 195(1|Perry(2008)) 100 10 - 0 "255954(101|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Sharp(2005),Durbin(2010),Pang(2010),Locke(2006),Korbel(2007),Cooper(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400442FE female research_filter TLUK35377 4 188280621 188536462 255842 Gain 3 0.906038 158 1629 chas 89.35 Gain 94.68 Gain 94.67 Gain GainGainGain 148 90.56 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q35.2 - LOC339975 1 LOC339975 1 - - - "255842(9|de Smith(2007),Pinto(2007),Matsuzaki(2009),Shaikh(2009),Zogopoulos(2007))" "1884(4|Levy(2007),McKernan(2009),Ahn(2009))" - 148 - 0 "255842(8|Durbin(2010),McKernan(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" IJCH39724 14 22687071 22942890 255820 Loss 1 0.857631 386 664 chas 0 - 0 - 0 - --- 202 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "255820(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 202 - 0 "255820(129|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401571SD male clinical_filter TOAX48712 16 21585792 21841354 255563 Loss 1 0.926353 177 1452 chas 60.28 Loss 60.49 Loss 60.25 Loss LossLossLoss 124 97.27 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p12.2 - "METTL9,IGSF6,RRN3P1,OTOA" 4 "METTL9,IGSF6,RRN3P1,OTOA" 4 OTOA "227399#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" "255563(6|Pang(2010),Kidd(2008),Korbel(2007),Tuzun(2005))" "255563(30|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),Jakobsson(2008),McKernan(2009),McCarroll(2008),Zogopoulos(2007))" 855(1|Conrad(2009)) 39 124 - 0 "255563(173|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" FPEA56091 16 34500501 34755816 255316 Gain 3 0.892833 160 1605 chas 100 Gain 100 Gain 100 Gain GainGainGain 151 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - "LOC283914,LOC146481,LOC100130700" 3 "LOC283914,LOC146481,LOC100130700" 3 - - 241996(1|Kidd(2008)) "255316(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 1 151 - 0 "255316(103|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" BTDG34378 22 25656237 25911104 254868 Gain 3 0.897247 72 3589 chas 51.78 Gain 88.58 Gain 94.84 Gain GainGainGain 298 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254868(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 71 297 - 0 "254868(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401366WD male "research_filter, clinical_filter" ORMZ25698 22 25656238 25911104 254867 Gain 3 0.891028 71 3640 chas 70.5 Gain 94.97 Gain 94.97 Gain GainGainGain 298 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254867(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 71 297 - 0 "254867(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400600DP female "research_filter, clinical_filter" FDPK98295 22 25656238 25910667 254430 Gain 3 0.902717 69 3741 chas 72.32 Gain 97.41 Gain 97.4 Gain GainGainGain 289 96.96 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254430(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 71 288 - 0 "254430(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" ZVRQ32621 22 25656238 25910667 254430 Gain 3 0.898539 69 3741 chas 72.32 Gain 85.73 Gain 85.73 Gain GainGainGain 289 96.96 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254430(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 71 288 - 0 "254430(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401176BD male "research_filter, clinical_filter" AXFF10000 22 25656238 25910667 254430 Loss 1 0.911956 69 3741 chas 72.32 Loss 96.07 Loss 96.7 Loss LossLossLoss 289 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254430(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 71 288 - 0 "254430(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400272AE male "research_filter, clinical_filter" ROAF64821 22 25656238 25910555 254318 Gain 3 0.897709 68 3795 chas 72.3 Gain 97.4 Gain 97.4 Gain GainGainGain 287 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254318(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 286 - 0 "254318(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" YREU97751 22 25656238 25910555 254318 Gain 3 0.887987 68 3795 chas 27.94 Gain 87.5 Gain 98.82 Gain GainGainGain 287 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254318(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 286 - 0 "254318(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" AFRT86195 22 25656238 25910555 254318 Gain 3 0.900617 68 3795 chas 72.28 Gain 94.96 Gain 95.46 Gain GainGainGain 287 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "254318(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 286 - 0 "254318(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400844GP male "research_filter, clinical_filter" IWPA56866 14 22687071 22941375 254305 Loss 1 0.85482 384 663 chas 0 - 0 - 0 - --- 198 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "254305(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 198 - 0 "254305(127|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401700BN_1 female clinical_filter LTTD14271 14 22687071 22941347 254277 Loss 1 0.867226 382 667 chas 0 - 23.12 Loss 0 - -Loss- 198 53.09 Loss GTC "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "254277(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 198 - 0 "254277(127|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" ZQHJ50767 6 168333308 168587371 254064 Gain 3 0.908729 266 958 chas 88.69 Gain 99.36 Gain 99.36 Gain GainGainGain 178 99.23 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "254064(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2597(12|Pang(2010),Conrad(2009),Levy(2007),McKernan(2009),Bentley(2008))" - 178 - 0 "254064(119|Ju(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" UKBP75340 14 22689703 22943573 253871 Loss 1 0.851807 380 669 chas 0 - 0 - 0 - --- 203 0 - - ChAS 14q11.2 - - 0 - 0 - - - "253871(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 203 - 0 "253871(130|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400059SV female clinical_filter ZDRZ89201 2 97908373 98162176 253804 Gain 3 0.885791 30 8751 chas 9.27 Gain 39.67 Gain 0 - GainGain- 30 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36,ANKRD36B,LOC100506123" 3 "ANKRD36,ANKRD36B,LOC100506123" 3 - - - "253804(20|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009))" "1425(3|Conrad(2009),Perry(2008))" 95 30 - 0 "253804(80|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401855RE male research_filter EJHE40652 15 28705281 28958779 253499 Loss 1 0.880562 16 16899 chas 0 - 0 - 0 - --- 39 0 - - ChAS 15q13.1 - "HERC2P9,GOLGA8G,GOLGA8F,MIR4509-2,MIR4509-3,MIR4509-1" 6 "HERC2P9,GOLGA8G,GOLGA8F,MIR4509-2,MIR4509-3,MIR4509-1" 6 - - - "248542(39|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Bentley(2008),Pang(2010))" 195(1|Perry(2008)) 100 39 - 0 "253499(80|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Ju(2010),Sharp(2005),Durbin(2010),Bentley(2008),Pang(2010),Locke(2006),Wong(2007),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no affy6_no 400654YW male - KNEY83753 13 32707508 32960792 253285 Loss 1 0.911325 600 422 chas 100 Loss 92.26 Loss 97.95 Loss LossLossLoss 309 NA NA NA "ChAS,IPN,NXS,PTK" 13q13.1 - "FRY,BRCA2,ZAR1L" 3 "FRY,BRCA2,ZAR1L" 3 BRCA2 - - - 243(1|Kim(2009)) - 309 - 0 "79588(12|Pinto(2011),Wong(2007),Kim(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400411TG male "research_filter, clinical_filter" EDMQ40540 6 80238028 80491078 253051 Gain 3 0.899601 220 1155 chas 98.71 Gain 99.29 Gain 99.29 Gain GainGainGain 168 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - "RNY4,LCA5,SH3BGRL2" 3 "RNY4,LCA5,SH3BGRL2" 3 LCA5 - - "15833(2|Conrad(2009),Matsuzaki(2009))" "684(4|Ahn(2009),Matsuzaki(2009))" 1 168 - 0 "123046(12|Teague(2010),Ahn(2009),Wong(2007),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401589HP male "research_filter, clinical_filter" PDHC59420 Y 24624094 24877075 252982 Loss 0 0.834227 56 4599 chas 100 Loss 0 - 0 - Loss-- 16 NA NA NA "ChAS,IPN" Yq11.223 - "PRY2,PRY" 2 "PRY2,PRY" 2 - "252982#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 13770(2|Matsuzaki(2009)) 380(1|Perry(2008)) 100 16 - 0 "252982(5|Teague(2010),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" DGQM75197 8 2330754 2583198 252445 Gain 3 0.902177 198 1281 chas 99.71 Gain 100 Gain 100 Gain GainGainGain 217 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - 12751(2|Pang(2010)) "252445(22|Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "2134(5|Wang(2008),Conrad(2009),Pang(2010),Mills(2006))" 5 217 - 0 "252445(66|Teague(2010),Durbin(2010),Redon(2006),Wang(2008),Pinto(2011),Sharp(2005),Itsara(2009),McKernan(2009),Wilson(2010),Locke(2006),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Jakobsson(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" EHXC97365 8 2330754 2583198 252445 Gain 3 0.91013 198 1281 chas 89.33 Gain 99.9 Gain 100 Gain GainGainGain 217 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - 12751(2|Pang(2010)) "252445(22|Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "2134(5|Wang(2008),Conrad(2009),Pang(2010),Mills(2006))" 5 217 - 0 "252445(66|Teague(2010),Durbin(2010),Redon(2006),Wang(2008),Pinto(2011),Sharp(2005),Itsara(2009),McKernan(2009),Wilson(2010),Locke(2006),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Jakobsson(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" OBWN97941 22 25656238 25908616 252379 Gain 3 0.882802 67 3823 chas 50.6 Gain 77.04 Gain 75.4 Gain GainGainGain 283 96.93 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,IGLL3P,CRYBB2P1" 3 "LRP5L,IGLL3P,CRYBB2P1" 3 - - - "252379(66|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "872(4|Bentley(2008),Conrad(2005),Mills(2006))" 72 282 - 0 "252379(229|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" BCMG96058 14 106525299 106777331 252033 Gain 3 0.896397 78 3273 chas 0 - 98.74 Gain 0 - -Gain- 125 NA NA NA "ChAS,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "252033(64|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 44 124 - 0 "252033(537|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400013TA male "research_filter, clinical_filter" FXID76383 14 106525299 106777210 251912 Gain 3 0.909864 76 3358 chas 97.95 Gain 95.38 Gain 98.74 Gain GainGainGain 124 93.47 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "251912(64|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 44 124 - 0 "251912(537|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" HARD47518 8 2330754 2582659 251906 Gain 3 0.900695 197 1285 chas 99.92 Gain 100 Gain 100 Gain GainGainGain 215 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - 12751(2|Pang(2010)) "251906(22|Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "2134(5|Wang(2008),Conrad(2009),Pang(2010),Mills(2006))" 5 215 - 0 "251906(66|Teague(2010),Durbin(2010),Redon(2006),Wang(2008),Pinto(2011),Sharp(2005),Itsara(2009),McKernan(2009),Wilson(2010),Locke(2006),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Jakobsson(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" FPUC66465 14 22691898 22943573 251676 Loss 1 0.852923 368 685 chas 0 - 0 - 0 - --- 200 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "251676(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 200 - 0 "251676(130|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400827MM male clinical_filter AIRH51991 8 5779956 6030889 250934 Loss 1 0.925284 269 936 chas 98.82 Loss 99.24 Loss 99.35 Loss LossLossLoss 364 98.83 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - - "250934(15|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Gusev(2009),Pinto(2007),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Mills(2006))" "951(3|Levy(2007),Perry(2008),Mills(2006))" - 364 - 0 "250934(52|Teague(2010),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400236DB_1 male "research_filter, clinical_filter" BSJX70163 13 97188397 97439143 250747 Loss 1 0.914533 272 925 chas 100 Loss 100 Loss 100 Loss LossLossLoss 128 NA NA NA "ChAS,IPN,NXS,PTK" 13q32.1 - HS6ST3 1 - 0 - - - - 148(1|Bentley(2008)) - 128 - 0 "250747(6|Kidd(2008),Durbin(2010),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401406KF male "research_filter, clinical_filter" XUEP99389 6 168333308 168583576 250269 Gain 3 0.898196 264 951 chas 94.51 Gain 95.17 Gain 99.35 Gain GainGainGain 177 99.21 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "250269(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2597(12|Pang(2010),Conrad(2009),Levy(2007),McKernan(2009),Bentley(2008))" - 177 - 0 "250269(119|Ju(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" ZNRO68615 Y 28420329 28670492 250164 Gain 2 0.873712 120 2102 chas 100 Gain 0 - 0 - Gain-- 138 NA NA NA "ChAS,IPN" Yq11.23 - - 0 - 0 - - - "213993(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" 633(1|Matsuzaki(2009)) 94 138 - 0 "200311(18|Locke(2006),McCarroll(2008),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401862AN male "research_filter, clinical_filter" WVDE74465 2 40210182 40459572 249391 Gain 3 0.899867 258 970 chas 83.9 Gain 98.74 Gain 98.74 Gain GainGainGain 242 97.48 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p22.1 - "SLC8A1,LOC100128590" 2 "SLC8A1,LOC100128590" 2 - - - 24342(1|Gusev(2009)) "367(4|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008))" - 241 - 0 "219649(26|Banerjee(2011),Wong(2007),Wang(2008),Levy(2007),Durbin(2010),Pang(2010),Gusev(2009),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401838EN male "research_filter, clinical_filter" OWBB95825 14 22692124 22941375 249252 Loss 1 0.854099 360 694 chas 0 - 0 - 0 - --- 191 0 - - ChAS 14q11.2 - - 0 - 0 - - - "249252(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 191 - 0 "249252(127|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 401275SJ male clinical_filter ABMS89106 16 70024577 70272376 247800 Gain 3 0.89291 31 8260 chas 0 - 68.88 Gain 0 - -Gain- 72 NA NA NA "ChAS,NXS" 16q22.1 - "MIR1972-2,MIR1972-1,PDPR,CLEC18C,LOC729513,PDXDC2P" 6 "MIR1972-2,MIR1972-1,PDPR,CLEC18C,LOC729513,PDXDC2P" 6 - - - "247800(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1187(4|Levy(2007),Matsuzaki(2009))" 94 72 - 0 "247800(181|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401674DD male research_filter TUPR75049 22 17055734 17303480 247747 Gain 3 0.892402 136 1835 chas 38.79 Gain 96.92 Gain 0 - GainGain- 112 NA NA NA "ChAS,IPN,NXS" 22q11.1 - "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 "psiTPTE22,XKR3,CCT8L2,ANKRD62P1-PARP4P3" 4 - "247747#1%""Cat-Eye Syndrome (Type I)"":18591860" - "247747(17|Itsara(2009),Jakobsson(2008),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" "459(2|Park(2010),Levy(2007))" 90 112 - 0 "247747(49|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),Park(2010),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" WSSG80726 14 22692441 22940138 247698 Gain 3 0.863531 344 722 chas 0 - 31.44 Gain 99.42 Gain #NAME? 188 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "247698(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 188 - 0 "247698(127|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400515ZG male "research_filter, clinical_filter" AFRT86195 2 126806753 127054351 247599 Loss 1 0.91749 152 1639 chas 100 Loss 100 Loss 100 Loss LossLossLoss 128 NA NA NA "ChAS,IPN,NXS,PTK" 2q14.3 - - 0 - 0 - - - 1608(1|Conrad(2009)) 731(1|Conrad(2009)) - 128 - 0 "133706(24|Teague(2010),Wong(2007),Redon(2006),Conrad(2009),Durbin(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 400844GP male "research_filter, clinical_filter" OUAW94182 9 33283582 33531047 247466 Gain 3 0.890433 220 1129 chas 87.79 Gain 99.99 Gain 100 Gain GainGainGain 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p13.3 - "NFX1,AQP3,AQP7,SUGT1P1,ANKRD18B,NOL6" 6 "NFX1,AQP3,AQP7,SUGT1P1,ANKRD18B,NOL6" 6 AQP3 - - "56035(13|Conrad(2009),Matsuzaki(2009),Perry(2008),Wang(2008),McKernan(2009),Bentley(2008),Shaikh(2009),Mills(2006))" - 28 137 - 0 "201993(26|Itsara(2009),Schuster(2010),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402063WM female "research_filter, clinical_filter" OAGJ33866 3 1316860 1563944 247085 Loss 1 0.917694 274 905 chas 99.53 Loss 98.83 Loss 100 Loss LossLossLoss 255 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.3 - CNTN6 1 CNTN6 1 - - - "247085(16|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),McKernan(2009),Bentley(2008),Pinto(2007),Park(2010),Simon-Sanchez(2007),Mills(2006))" "367(2|Matsuzaki(2009),Shaikh(2009))" - 255 - 0 "247085(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2007),Shaikh(2009),Park(2010),Jakobsson(2008),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" ZYTR30302 14 106530534 106777331 246798 Loss 1 0.900611 76 3290 chas 97.43 Loss 97.41 Loss 97.41 Loss LossLossLoss 122 95.45 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "246798(63|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 45 121 - 0 "246798(523|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400356MC female "research_filter, clinical_filter" PAFA79672 5 21486661 21733331 246671 Gain 3 0.904553 134 1854 chas 86.46 Gain 86.63 Gain 86.72 Gain GainGainGain 150 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.3 - GUSBP1 1 GUSBP1 1 - - - "91982(26|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),McKernan(2009),Kidd(2008),Tuzun(2005),Park(2010))" "1462(8|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Mills(2006))" 15 150 - 0 "246671(80|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Wang(2008),Levy(2007),Tuzun(2005),Park(2010),Durbin(2010),Bentley(2008),Kidd(2008),Korbel(2007),Perry(2008b),Locke(2006),McKernan(2009),Itsara(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402033WD male "research_filter, clinical_filter" JUSU56143 14 22692441 22938933 246493 Gain 3 0.863464 343 720 chas 0 - 15.77 Gain 100 Gain #NAME? 187 0 - - "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "246493(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 187 - 0 "246493(127|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400743LS female "research_filter, clinical_filter" GFOF72186 5 156402215 156647788 245574 Gain 3 0.907309 348 707 chas 96.62 Gain 97.33 Gain 100 Gain GainGainGain 168 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q33.3 - "ITK,FAM71B,HAVCR1,HAVCR2,MED7" 5 "ITK,FAM71B,HAVCR1,HAVCR2,MED7" 5 "HAVCR1,ITK" - - 7388(2|Pang(2010)) - 2 168 - 0 "87345(18|Pang(2010),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" OWWR99794 2 212236088 212481478 245391 Gain 3 0.900069 417 589 chas 100 Gain 100 Gain 93.75 Gain GainGainGain 204 NA NA NA "ChAS,IPN,NXS,PTK" 2q34 - ERBB4 1 ERBB4 1 - - - 2972(1|Wang(2007)) 650(1|Park(2010)) - 204 - 0 "235555(14|Wang(2007),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" JWQI23251 16 21596300 21841456 245157 Loss 1 0.916533 177 1392 chas 100 Loss 58.87 Loss 100 Loss LossLossLoss 117 99.14 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p12.2 - "METTL9,IGSF6,RRN3P1,OTOA" 4 "METTL9,IGSF6,RRN3P1,OTOA" 4 OTOA "227501#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" "245157(6|Pang(2010),Kidd(2008),Korbel(2007),Tuzun(2005))" "245157(22|Wang(2007),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Cooper(2008),Park(2010),Redon(2006),Ju(2010),Zogopoulos(2007))" 855(1|Conrad(2009)) 41 117 - 0 "245157(147|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Teague(2010),Conrad(2009),Jakobsson(2008),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400247CL male "research_filter, clinical_filter" SKLJ58672 1 163558092 163801544 243453 Loss 1 0.926895 149 1644 chas 93.48 Loss 96.75 Loss 96.74 Loss LossLossLoss 143 97.78 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q23.3 - - 0 - 0 - - - - - - 143 - 0 "99355(9|Kidd(2008),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" TNZB91328 10 98455754 98698686 242933 Gain 3 0.892446 192 1271 chas 96.2 Gain 98.1 Gain 98.1 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 10q24.1 - "LCOR,PIK3AP1" 2 "LCOR,PIK3AP1" 2 - - - "52252(2|Park(2010),McKernan(2009))" "1185(3|Levy(2007),Ahn(2009),Bentley(2008))" 1 110 - 0 "170956(35|Teague(2010),Ahn(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400911GA female "research_filter, clinical_filter" HQWW55061 17 15855134 16097403 242270 Gain 3 0.913318 220 1106 chas 79.72 Gain 84.73 Gain 100 Gain GainGainGain 117 97.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "17p12,17p11.2" - "ADORA2B,ZSWIM7,TTC19,NCOR1" 4 "ADORA2B,ZSWIM7,TTC19,NCOR1" 4 TTC19 - - "21529(5|Conrad(2009),Wheeler(2008),McKernan(2009),Matsuzaki(2009))" "684(3|Levy(2007),Bentley(2008))" 4 117 - 0 "242270(26|Conrad(2009),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" TBVD73320 5 175373703 175615594 241892 Gain 3 0.886733 66 3721 chas 82.47 Gain 39.28 Gain 0 - GainGain- 77 NA NA NA "ChAS,IPN,NXS" 5q35.2 - "THOC3,FAM153B,LOC100507387,LOC643201" 4 "THOC3,FAM153B,LOC100507387,LOC643201" 4 - "241892#1%""Sotos syndrome"":2326144" - "241892(30|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" 230(1|Wang(2008)) 81 77 - 0 "241892(110|Conrad(2009),Wong(2007),Pinto(2007),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Redon(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400712GC female "research_filter, clinical_filter" CBBY76424 7 15334035 15575393 241359 Loss 1 0.929858 332 729 chas 98.67 Loss 97.84 Loss 97.84 Loss LossLossLoss 213 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.2 - AGMO 1 AGMO 1 - - - "56406(6|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" "172(2|Pang(2010),Mills(2006))" - 213 - 0 "115818(32|Conrad(2009),Conrad(2006),Durbin(2010),Pang(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401927SK female "research_filter, clinical_filter" MYLH81171 14 106536858 106777330 240473 Gain 3 0.890244 74 3294 chas 100 Gain 100 Gain 100 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "240473(63|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 46 118 - 0 "240473(509|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401972BA male "research_filter, clinical_filter" MLXC26947 14 22718942 22959362 240421 Gain 3 0.869471 336 717 chas 0 - 1.06 Gain 92.48 Gain #NAME? 186 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "240421(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 186 - 0 "240421(134|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401977ES male "research_filter, clinical_filter" AVAH45014 6 76736997 76977357 240361 Gain 3 0.903173 176 1373 chas 97.45 Gain 99.33 Gain 100 Gain GainGainGain 147 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - IMPG1 1 IMPG1 1 - - - - 222(1|Wang(2008)) - 147 - 0 "38679(16|Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" INUW24322 14 106536991 106777331 240341 Loss 1 0.907608 74 3292 chas 100 Loss 74.39 Loss 100 Loss LossLossLoss 119 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "240341(63|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 46 118 - 0 "240341(509|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400110MD male "research_filter, clinical_filter" DZXP20142 14 106536991 106777330 240340 Loss 1 0.916053 73 3338 chas 98.58 Loss 89.17 Loss 100 Loss LossLossLoss 118 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "240340(63|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 46 118 - 0 "240340(509|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" RBTV68848 14 106536991 106777210 240220 Gain 3 0.910691 72 3383 chas 88.58 Gain 100 Gain 0 - GainGain- 118 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "240220(63|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 46 118 - 0 "240220(509|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" EMKM20452 14 22553956 22793078 239123 Gain 3 0.87718 439 545 chas 0 - 67.36 Gain 100 Gain #NAME? 250 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "239123(14|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1559(7|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 250 - 0 "239123(77|Sebat(2004),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" VZCC67569 6 168333308 168571947 238640 Gain 3 0.895619 256 935 chas 12.77 Gain 97.9 Gain 97.89 Gain GainGainGain 168 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "MLLT4,KIF25,HGC6.3,FRMD1" 4 "MLLT4,KIF25,HGC6.3,FRMD1" 4 - - - "238640(36|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "2597(12|Pang(2010),Conrad(2009),Levy(2007),McKernan(2009),Bentley(2008))" - 168 - 0 "238640(119|Ju(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),McKernan(2009),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" MTFT89424 9 561854 798521 236668 Gain 3 0.903109 401 591 chas 95.19 Gain 100 Gain 100 Gain GainGainGain 345 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.3 - KANK1 1 KANK1 1 KANK1 - - "236668(36|Wang(2007),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Matsuzaki(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "3522(12|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Levy(2007),Pang(2010),Mills(2006))" - 345 - 0 "236668(96|Ju(2010),Redon(2006),Wang(2007),Conrad(2006),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" LLZZ76842 3 108416784 108653389 236606 Loss 1 0.919456 228 1042 chas 96 Loss 98 Loss 98 Loss LossLossLoss 175 95.47 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q13.13 - "RETNLB,TRAT1,GUCA1C" 3 "RETNLB,TRAT1,GUCA1C" 3 - - - "5025(4|McKernan(2009),Matsuzaki(2009),Shaikh(2009))" "744(2|Conrad(2009),Matsuzaki(2009))" 0 175 - 0 "236606(22|Teague(2010),Wong(2007),Conrad(2009),Levy(2007),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400354TJ female "research_filter, clinical_filter" RNZZ40210 8 97478546 97714642 236097 Gain 3 0.910166 222 1068 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 176 NA NA NA "ChAS,IPN,NXS,PTK" 8q22.1 - "SDC2,PGCP" 2 "SDC2,PGCP" 2 - - - "7264(8|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Park(2010),Kim(2009))" "1701(7|Matsuzaki(2009),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Mills(2006))" - 176 - 0 "196292(58|Ju(2010),Ahn(2009),Wong(2007),Teague(2010),Conrad(2009),McKernan(2009),Durbin(2010),De(Smith_2007),Pang(2010),Pinto(2011),Park(2010),Kim(2009),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" CWFZ39975 12 84469896 84705912 236017 Gain 3 0.893565 197 1204 chas 70.86 Gain 99.19 Gain 99.19 Gain GainGainGain 158 92.43 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.31 - - 0 - 0 - - - "11307(10|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Park(2010))" "1815(9|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Park(2010),Wheeler(2008))" - 158 - 0 "232362(132|Ju(2010),Ahn(2009),Wong(2007),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" XNQF62194 10 116644169 116879483 235315 Gain 3 0.900436 192 1232 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 124 NA NA NA "ChAS,IPN,NXS,PTK" 10q25.3 - "FAM160B1,TRUB1,ATRNL1" 3 "FAM160B1,TRUB1,ATRNL1" 3 - - - - 168(2|Levy(2007)) - 122 - 0 "235315(9|Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401690HA male "research_filter, clinical_filter" YIUT48601 7 62849387 63083344 233958 Loss 1 0.871372 32 7547 chas 0 - 0 - 0 - --- 20 NA NA NA ChAS 7q11.21 - "LOC100287834,MIR4283-2,MIR4283-1" 3 "LOC100287834,MIR4283-2,MIR4283-1" 3 - - - "233958(15|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Pinto(2007))" 291(1|Perry(2008)) 98 20 - 0 "233958(37|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401274PA female clinical_filter BHQW11777 16 28810325 29043450 233126 Gain 3 0.895377 141 1665 chas 92.4 Gain 62.23 Gain 100 Gain GainGainGain 74 NA NA NA "ChAS,IPN,NXS,PTK" 16p11.2 - "ATXN2L,ATP2A1,MIR4517,MIR4721,NFATC2IP,SPNS1,RABEP2,SH2B1,LAT,TUFM,CD19" 11 "ATXN2L,ATP2A1,MIR4517,MIR4721,NFATC2IP,SPNS1,RABEP2,SH2B1,LAT,TUFM,CD19" 11 "ATP2A1,TUFM,CD19" "231868#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" - "24265(5|de Smith(2007),Conrad(2009),Matsuzaki(2009),Perry(2008))" "2834(5|de Smith(2007),Pang(2010),Ahn(2009),McKernan(2009),Perry(2008))" 5 74 - 0 "233126(37|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" SYKZ99867 1 108713557 108946614 233058 Loss 1 0.897953 126 1864 chas 84.3 Loss 72.2 Loss 99.35 Loss LossLossLoss 91 NA NA NA "ChAS,IPN,NXS,PTK" 1p13.3 - "NBPF4,SLC25A24" 2 "NBPF4,SLC25A24" 2 - - 108883(1|Kidd(2008)) "212842(48|Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" 860(5|Matsuzaki(2009)) 61 91 - 0 "233058(184|Teague(2010),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402065BG male "research_filter, clinical_filter" FPLE23103 1 107260536 107492581 232046 Gain 3 0.896284 180 1296 chas 98.56 Gain 100 Gain 99.28 Gain GainGainGain 181 NA NA NA "ChAS,IPN,NXS,PTK" 1p13.3 - - 0 - 0 - - - 30832(1|Tuzun(2005)) - - 181 - 0 "136377(10|Banerjee(2011),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Tuzun(2005),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" NLDQ95097 6 28417488 28649125 231638 Gain 3 0.897711 186 1252 chas 74.78 Gain 87.4 Gain 100 Gain GainGainGain 115 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "SCAND3,GPX5,GPX6" 3 "SCAND3,GPX5,GPX6" 3 - - - "28465(4|Conrad(2009),Korbel(2007),Matsuzaki(2009))" - - 115 - 0 "207686(8|Kidd(2008),Wong(2007),Korbel(2007),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" EHLK43437 17 18922418 19152089 229672 Loss 1 0.86494 10 25519 chas 0 - 0 - 0 - --- 20 0 - - ChAS 17p11.2 - "GRAP,SLC5A10,GRAPL,EPN2" 4 "GRAP,SLC5A10,GRAPL,EPN2" 4 - "229672#2%""Smith-Magenis Syndrome"":3776041,""Potocki-Lupski syndrome (17p11.2 duplication syndrome)"":3776041" 212592(1|Kidd(2008)) "229672(14|de Smith(2007),Kidd(2008),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 94 20 - 0 "229672(182|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401192MJ male - UDNO19569 14 22598597 22827209 228613 Gain 3 0.869431 432 530 chas 0 - 59.28 Gain 100 Gain #NAME? 219 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "228613(13|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 219 - 0 "228613(73|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401766MR male "research_filter, clinical_filter" VSHC86133 14 22732619 22960619 228001 Loss 1 0.857128 317 721 chas 0 - 3.13 Loss 0 - -Loss- 175 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 1846(1|Ahn(2009)) "228001(25|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 175 - 0 "228001(137|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400347VJ male "research_filter, clinical_filter" OTMU34006 5 1055626 1282693 227068 Gain 3 0.899999 332 686 chas 69.61 Gain 96 Gain 100 Gain GainGainGain 136 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "SLC6A18,SLC12A7,SLC6A19,MIR4635,TERT" 5 "SLC6A18,SLC12A7,SLC6A19,MIR4635,TERT" 5 "SLC6A19,TERT" "227068#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "92529(20|Ju(2010),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Itsara(2009),Park(2010))" "6657(31|Conrad(2009),Ahn(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Wang(2008),Wheeler(2008),Mills(2006))" - 136 - 0 "227068(280|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402038MR male "research_filter, clinical_filter" ZYKC24489 1 46120435 46347383 226949 Gain 3 0.900335 222 1026 chas 80.96 Gain 96.21 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 1p34.1 - "IPP,MAST2,TMEM69,GPBP1L1" 4 "IPP,MAST2,TMEM69,GPBP1L1" 4 - - - "38115(8|Pang(2010),Conrad(2009),Korbel(2007),Conrad(2005),Matsuzaki(2009))" "857(6|Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 1 99 - 0 "127596(30|Conrad(2009),Korbel(2007),Wang(2008),Levy(2007),Conrad(2006),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" LDEW86321 17 18922418 19149350 226933 Loss 1 0.882087 8 32419 chas 0 - 0 - 0 - --- 19 0 - - ChAS 17p11.2 - "GRAP,SLC5A10,GRAPL,EPN2" 4 "GRAP,SLC5A10,GRAPL,EPN2" 4 - "226933#2%""Smith-Magenis Syndrome"":3776041,""Potocki-Lupski syndrome (17p11.2 duplication syndrome)"":3776041" 212592(1|Kidd(2008)) "226933(14|de Smith(2007),Kidd(2008),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 95 19 - 0 "226933(182|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401786WD male - TFBW53379 14 22718942 22944507 225566 Loss 1 0.850815 332 681 chas 0 - 0 - 0 - --- 177 22.32 Loss GTC ChAS 14q11.2 - - 0 - 0 - - - "225566(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 177 - 0 "225566(131|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401087SF male clinical_filter WKJP80388 4 127227829 127453231 225403 Loss 1 0.897447 136 1669 chas 94.79 Loss 97.39 Loss 97.39 Loss LossLossLoss 135 97.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q28.1 - - 0 - 0 - - - 5195(1|Matsuzaki(2009)) 113(1|Wheeler(2008)) - 135 - 0 "152928(15|Kidd(2008),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400320RN male "research_filter, clinical_filter" ZRXE40373 Y 24017592 24241593 224002 Gain 2 0.928213 392 572 chas 71.61 Gain 0 - 0 - Gain-- 16 0 - - "ChAS,IPN" Yq11.223 - "RBMY1B,PRY2,RBMY1E,RBMY1D,RBMY1A1,PRY" 6 "RBMY1B,PRY2,RBMY1E,RBMY1D,RBMY1A1,PRY" 6 - "224002#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "217594(5|Matsuzaki(2009),Perry(2008))" 380(1|Perry(2008)) 100 16 - 0 "224002(8|Locke(2006),Redon(2006),Durbin(2010),Perry(2008))" TRUE TRUE ipn_yes algo_yes affy6_no 400730SH male "research_filter, clinical_filter" ENVJ37912 20 29652122 29875831 223710 Gain 3 0.917567 44 5202 chas 18.31 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 20q11.21 150001(1|contig) DEFB115 1 DEFB115 1 - - - "47775(19|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),McKernan(2009),Pang(2010),Park(2010),Mills(2006))" 108(1|Wheeler(2008)) 1 23 - 0 "73711(76|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Pinto(2011),Perry(2008b),Park(2010),Jakobsson(2008),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400532MH male research_filter SEHC73357 6 488810 712070 223261 Gain 3 0.900304 261 858 chas 83.54 Gain 96.68 Gain 96.74 Gain GainGainGain 167 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - "EXOC2,HUS1B" 2 "EXOC2,HUS1B" 2 - - - "138347(37|Conrad(2009),Ahn(2009),Matsuzaki(2009),Ju(2010),Wang(2008),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Wheeler(2008),Kim(2009))" "4057(16|Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 1 167 - 0 "223261(130|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Campbell(2011),Perry(2008b),Pinto(2011),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402019MC male "research_filter, clinical_filter" XZOF13341 14 106924693 107147845 223153 Gain 3 0.896347 150 1497 chas 83.58 Gain 100 Gain 100 Gain GainGainGain 141 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00221 1 LINC00221 1 - - - "223153(86|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "55207(8|Wang(2008),Bentley(2008),Matsuzaki(2009),Mills(2006))" 23 141 - 0 "223153(327|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Shaikh(2009),Iafrate(2004),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" ZRXE40373 Y 24644461 24867009 222549 Gain 2 0.936883 42 5428 chas 100 Gain 0 - 0 - Gain-- 5 0 - - "ChAS,IPN" Yq11.223 - "PRY2,PRY" 2 "PRY2,PRY" 2 - "222549#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 13770(2|Matsuzaki(2009)) 380(1|Perry(2008)) 100 5 - 0 "222549(3|Perry(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400730SH male research_filter OPOQ31165 6 17457599 17679960 222362 Gain 3 0.903473 256 872 chas 100 Gain 99.99 Gain 100 Gain GainGainGain 155 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.3 - "FAM8A1,NUP153,CAP2" 3 "FAM8A1,NUP153,CAP2" 3 - - - - "741(7|Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008))" 1 155 CAP2#asd_candidate 1 "222362(31|Ahn(2009),Wong(2007),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" EFHU67365 14 22746792 22969118 222327 Gain 3 0.868546 305 731 chas 0 - 0 - 0 - --- 171 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "222327(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 171 - 0 "222327(133|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401333MM male clinical_filter MJBR37071 X 6449837 6671662 221826 Gain 2 0.937479 1027 216 chas 89.44 Gain 0 - 0 - Gain-- 153 NA NA NA "ChAS,IPN" Xp22.31 - VCX3A 1 VCX3A 1 - "221826#1%""Steroid sulphatase deficiency (STS)"":1725741" - "221826(17|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 4 153 - 0 "221826(17|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" DOIH36842 19 28271147 28492962 221816 Gain 3 0.898402 430 517 chas 84.07 Gain 99.28 Gain 100 Gain GainGainGain 189 NA NA NA "ChAS,IPN,NXS,PTK" 19q11 - LOC148189 1 LOC148189 1 - - - "45358(12|de Smith(2007),Conrad(2009),Ahn(2009),Pang(2010),Matsuzaki(2009))" - - 189 - 0 "197088(36|Conrad(2009),Ahn(2009),Itsara(2009),Durbin(2010),Pang(2010),Wilson(2010),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" NFGH10073 16 16294706 16516109 221404 Gain 3 0.868124 94 2380 chas 0 - 15.38 Gain 0 - -Gain- 12 NA NA NA "ChAS,NXS" 16p13.11 - "NOMO3,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1,PKD1P1,ABCC6" 9 "NOMO3,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1,PKD1P1,ABCC6" 9 ABCC6 - - "221404(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),de Smith(2007),Pang(2010))" - 100 12 - 0 "221404(52|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Kidd(2008),Durbin(2010),Pang(2010),Pinto(2011),Perry(2008b),Locke(2006),Ju(2010),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 400553PP male "research_filter, clinical_filter" VQFC85923 16 49740655 49961548 220894 Gain 3 0.902351 184 1207 chas 88.06 Gain 99.22 Gain 99.36 Gain GainGainGain 160 NA NA NA "ChAS,IPN,NXS,PTK" 16q12.1 - ZNF423 1 ZNF423 1 - - - "64960(2|Park(2010),Conrad(2009))" 672(1|Park(2010)) - 160 - 0 "75482(32|Park(2010),Pinto(2011),Shaikh(2009),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" LCVR91256 16 69977422 70197754 220333 Loss 1 0.881477 32 7107 chas 0 - 0 - 0 - --- 54 NA NA NA ChAS 16q22.1 - "CLEC18A,MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 5 "CLEC18A,MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 5 - - - "220333(52|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1446(5|Levy(2007),Wheeler(2008),Matsuzaki(2009))" 94 53 - 0 "220333(167|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_no NA 401510DG male clinical_filter QYVK49015 9 97201731 97420857 219127 Gain 3 0.903114 294 747 chas 100 Gain 100 Gain 100 Gain GainGainGain 164 NA NA NA "ChAS,IPN,NXS,PTK" 9q22.32 - "HIATL1,FBP1,FBP2" 3 "HIATL1,FBP1,FBP2" 3 FBP1 - - "19258(4|de Smith(2007),Conrad(2009),McKernan(2009),Mills(2006))" "2039(8|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 21 163 - 0 "168332(33|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" YCEN33630 6 161599406 161817638 218233 Gain 4 0.927954 224 978 chas 95.11 Gain 99.56 Gain 95.73 Gain GainGainGain 163 98.47 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q26 - "AGPAT4,PARK2" 2 "AGPAT4,PARK2" 2 PARK2 - - "218233(8|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),Pinto(2007),Park(2010),Kim(2009))" "1224(12|Levy(2007),Wheeler(2008),Matsuzaki(2009),Bentley(2008))" - 163 PARK2#asd_candidate 1 "132293(42|Teague(2010),Wong(2007),Ju(2010),Conrad(2009),Levy(2007),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" KZTP77176 6 121295975 121513664 217690 Loss 1 0.923962 193 1133 chas 88.46 Loss 94.82 Loss 96.68 Loss LossLossLoss 126 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q22.31 - C6orf170 1 C6orf170 1 - - - 1419(1|Conrad(2009)) "636(4|Wang(2008),Levy(2007),Ahn(2009),Wheeler(2008))" - 126 - 0 "74142(24|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Durbin(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" GQXG36971 14 22722491 22940138 217648 Gain 3 0.867418 310 704 chas 0 - 76.49 Gain 100 Gain #NAME? 161 80.04 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "217648(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 161 - 0 "217648(126|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" EEVS84165 Y 25842927 26060540 217614 Gain 2 0.871482 57 3885 chas 0 - 0 - 0 - --- 108 0 - - ChAS Yq11.223 - - 0 - 0 - "217614#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "217614(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 108 - 0 "217614(5|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_no algo_no affy6_no 401039PA male clinical_filter TPCN38834 X 146037088 146254547 217460 Loss 1 0.918686 136 1610 chas 100 Loss 0 - 0 - Loss-- 187 NA NA NA "ChAS,IPN" Xq27.3 - - 0 - 0 - - - "137784(11|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),McCarroll(2005),Shaikh(2009))" 604(1|Matsuzaki(2009)) 2 187 - 0 "191237(22|Conrad(2009),Redon(2006),Perry(2008),Durbin(2010),Kidd(2008),Pinto(2007),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" KWYE93203 6 17679622 17897037 217416 Gain 3 0.903137 204 1071 chas 97.11 Gain 98.74 Gain 100 Gain GainGainGain 135 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.3 - "NUP153,KIF13A" 2 "NUP153,KIF13A" 2 - - - 25889(1|Park(2010)) 638(1|Conrad(2009)) - 135 - 0 "217416(12|Conrad(2009),Wong(2007),Durbin(2010),Pinto(2011),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401357MH male "research_filter, clinical_filter" YBGD61325 1 189320336 189537683 217348 Loss 1 0.90068 168 1301 chas 99.99 Loss 98.61 Loss 100 Loss LossLossLoss 134 97.08 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - "217348(16|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Redon(2006),McCarroll(2008),Zogopoulos(2007))" 708(1|Perry(2008)) - 134 - 0 "217348(49|Wang(2007),Pinto(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Shaikh(2009),Campbell(2011),Park(2010),Redon(2006),Jakobsson(2008),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400543CK male "research_filter, clinical_filter" TFVC48426 10 17820273 18037328 217056 Loss 1 0.88228 33 6783 chas 0 - 0 - 0 - --- 13 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "19219(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 77 13 - 0 "152220(11|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 400501SJ male clinical_filter JYCC50302 6 161345213 161562254 217042 Gain 3 0.92087 212 1028 chas 95.86 Gain 100 Gain 100 Gain GainGainGain 166 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - "AGPAT4,MAP3K4" 2 "AGPAT4,MAP3K4" 2 - - - "97165(2|Simon-Sanchez(2007),Mills(2006))" "581(4|Wang(2008),Pang(2010),Levy(2007),Bentley(2008))" - 166 - 0 "103680(19|Wong(2007),Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" JWQI23251 10 17820273 18036656 216384 Loss 1 0.882017 32 6980 chas 0 - 0 - 55.22 Loss #NAME? 13 0 - - "ChAS,PTK" 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "19219(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 77 13 - 0 "151548(11|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400247CL male "research_filter, clinical_filter" PYHX78792 10 17820273 18036656 216384 Loss 1 0.881096 32 6980 chas 0 - 0 - 0 - --- 13 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "19219(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 77 13 - 0 "151548(11|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 401799DP male clinical_filter AXJJ81139 10 17820273 18036656 216384 Loss 1 0.876135 32 6980 chas 0 - 0 - 0 - --- 13 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "19219(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 77 13 - 0 "151548(11|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 400432VA male clinical_filter YOPA81411 10 17820273 18036656 216384 Loss 1 0.873422 32 6980 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "19219(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 77 13 - 0 "151548(11|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no NA 402056KD male clinical_filter UPRR75789 14 106560963 106777331 216369 Loss 1 0.886498 62 3547 chas 38.95 Loss 78.91 Loss 97.18 Loss LossLossLoss 107 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "216369(59|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 52 106 - 0 "216369(495|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400889CM female "research_filter, clinical_filter" UECJ73760 14 106560963 106777331 216369 Loss 1 0.904121 62 3547 chas 39.02 Loss 62.62 Loss 98.59 Loss LossLossLoss 107 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "216369(59|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 52 106 - 0 "216369(495|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" JSXF59945 14 106560963 106777210 216248 Loss 1 0.899213 60 3665 chas 50.94 Loss 90.55 Loss 92.02 Loss LossLossLoss 106 93.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "216248(59|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 52 106 - 0 "216248(495|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female "research_filter, clinical_filter" MGYM61346 14 106560963 106777210 216248 Loss 1 0.911744 60 3665 chas 50.94 Loss 83.78 Loss 95.17 Loss LossLossLoss 106 93.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "216248(59|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 52 106 - 0 "216248(495|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400974PS female "research_filter, clinical_filter" SJFM69248 20 14691426 14907597 216172 Loss 1 0.934775 172 1264 chas 96.26 Loss 97.88 Loss 97.88 Loss LossLossLoss 223 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - "MACROD2-AS1,MACROD2" 2 MACROD2-AS1 1 - - - "216172(37|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1(1|Levy(2007)) - 223 - 0 "216172(116|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401655DC male "research_filter, clinical_filter" GKVG35266 22 24137684 24353737 216054 Gain 3 0.904461 252 860 chas 58.11 Gain 81.74 Gain 87.6 Gain GainGainGain 151 94.01 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.23 - "GSTT2B,GSTT2,LOC284889,DDTL,SLC2A11,MIF,GSTTP1,DERL3,SMARCB1,DDT" 10 "SMARCB1,GSTT2,LOC284889,DDTL,SLC2A11,MIF,GSTTP1,DERL3,GSTT2B,DDT" 10 "SMARCB1,MIF" - - "101708(73|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" "1871(3|Park(2010),Kim(2009),Mills(2006))" 35 151 - 0 "216054(500|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" BCMG96058 Y 24650154 24865822 215669 Gain 2 0.882448 39 5675 chas 19.05 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" Yq11.223 - "PRY2,PRY" 2 "PRY2,PRY" 2 - "215669#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 10499(2|Matsuzaki(2009)) 380(1|Perry(2008)) 100 5 - 0 "215669(3|Perry(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400013TA male research_filter YREU97751 19 28492811 28707872 215062 Loss 1 0.896537 272 793 chas 91.81 Loss 95.65 Loss 99.16 Loss LossLossLoss 192 NA NA NA "ChAS,IPN,NXS,PTK" "19q11,19q12" - - 0 - 0 - - - "34719(3|Pinto(2007),Matsuzaki(2009))" - - 192 - 0 "215062(10|Pinto(2011),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" ASYD11505 19 28492811 28707872 215062 Loss 1 0.91939 272 793 chas 96.02 Loss 99.69 Loss 99.73 Loss LossLossLoss 192 NA NA NA "ChAS,IPN,NXS,PTK" "19q11,19q12" - - 0 - 0 - - - "34719(3|Pinto(2007),Matsuzaki(2009))" - - 192 - 0 "215062(10|Pinto(2011),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 402024BB male "research_filter, clinical_filter" RBTV68848 6 4255708 4470722 215015 Loss 1 0.933972 204 1059 chas 100 Loss 100 Loss 100 Loss LossLossLoss 218 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.1 - - 0 - 0 - - - "215015(4|Itsara(2009),Conrad(2009),Shaikh(2009),Simon-Sanchez(2007))" - - 218 - 0 "215015(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" VZJS13167 5 668842 883821 214980 Gain 3 0.903286 30 7413 chas 25.81 Gain 52.77 Gain 0 - GainGain- 98 47.42 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11,BRD9" 3 "TPPP,ZDHHC11,BRD9" 3 - "214980#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "214980(69|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Ju(2010),Park(2010),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "5867(19|Park(2010),Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 79 98 TPPP#asd_candidate 1 "214980(298|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),McKernan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400213DB female research_filter OBWN97941 4 10115495 10330328 214834 Gain 3 0.867547 232 930 chas 5.42 Gain 0 - 0 - Gain-- 317 9.83 Gain BS "ChAS,IPN" 4p16.1 - WDR1 1 WDR1 1 - - - "199368(48|Conrad(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),McCarroll(2005),Park(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" "2728(15|Conrad(2009),Perry(2008),Ju(2010),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 317 - 0 "191066(236|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" LRBG51365 X 140340737 140555204 214468 Gain 3 0.897489 116 1864 chas 84.46 Gain 0 - 0 - Gain-- 145 NA NA NA "ChAS,IPN" Xq27.2 - - 0 - 0 - - 214468(1|Kidd(2008)) "214468(10|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "1156(5|Matsuzaki(2009),Perry(2008))" 5 145 - 0 "214468(48|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2007),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400886MP female "research_filter, clinical_filter" XQAG43010 16 6845489 7059572 214084 Loss 1 0.913696 546 392 chas 100 Loss 97.97 Loss 100 Loss LossLossLoss 223 NA NA NA "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - "214084(13|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pang(2010),Simon-Sanchez(2007),Park(2010),Redon(2006),Shaikh(2009),Zogopoulos(2007))" "717(2|Pang(2010),Shaikh(2009))" - 223 - 0 "214084(43|Wang(2007),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Park(2010),Redon(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" GUWW37548 14 22730241 22943573 213333 Gain 3 0.86294 316 677 chas 0 - 60.18 Gain 0 - -Gain- 164 80.23 Gain GTC "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "213333(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 164 - 0 "213333(129|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401195PN male "research_filter, clinical_filter" JSXF59945 19 6890663 7103968 213306 Gain 3 0.900298 188 1140 chas 62.59 Gain 99.88 Gain 100 Gain GainGainGain 128 99.01 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "19p13.3,19p13.2" - "EMR1,EMR4P,FLJ25758,ZNF557,MBD3L2,MBD3L3,MBD3L4,MBD3L5" 8 "EMR1,EMR4P,FLJ25758,ZNF557,MBD3L2,MBD3L3,MBD3L4,MBD3L5" 8 - - - "213306(23|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "1073(3|Park(2010),Levy(2007),Wheeler(2008))" 17 128 - 0 "213306(100|Teague(2010),Wong(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Park(2010),Wilson(2010),Simon-Sanchez(2007),Pinto(2011),Schuster(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female "research_filter, clinical_filter" GNZH35610 19 6890663 7103968 213306 Gain 3 0.904188 188 1140 chas 97.89 Gain 99.9 Gain 99.9 Gain GainGainGain 128 NA NA NA "ChAS,IPN,NXS,PTK" "19p13.3,19p13.2" - "EMR1,EMR4P,FLJ25758,ZNF557,MBD3L2,MBD3L3,MBD3L4,MBD3L5" 8 "EMR1,EMR4P,FLJ25758,ZNF557,MBD3L2,MBD3L3,MBD3L4,MBD3L5" 8 - - - "213306(23|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "1073(3|Park(2010),Levy(2007),Wheeler(2008))" 17 128 - 0 "213306(100|Teague(2010),Wong(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Park(2010),Wilson(2010),Simon-Sanchez(2007),Pinto(2011),Schuster(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402029KJ male "research_filter, clinical_filter" KLXQ40405 14 22747483 22960757 213275 Loss 1 0.856585 288 743 chas 0 - 0 - 0 - --- 155 100 Loss "BS,GTC,IP6" ChAS 14q11.2 - - 0 - 0 - - 1984(1|Ahn(2009)) "213275(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 155 - 0 "213275(132|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400051MR_1 male clinical_filter BYSK29073 Y 27014504 27227595 213092 Gain 2 0.86766 56 3874 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 - "213092#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "213092(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 17 - 0 "213092(9|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" TRUE TRUE ipn_no algo_no NA 400620MT male clinical_filter VVPL10652 14 22746792 22959279 212488 Loss 1 0.853469 283 753 chas 0 - 0 - 0 - --- 147 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 506(1|Ahn(2009)) "212488(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 147 - 0 "212488(129|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400871CM female clinical_filter EIZV81962 X 148884729 149097068 212340 Gain 3 0.911157 352 604 chas 53.18 Gain 0 - 0 - Gain-- 67 67.83 Gain "GTC,IP6" "ChAS,IPN" Xq28 "100002(2|clone,contig)" MAGEA8 1 MAGEA8 1 - - - "212340(10|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McCarroll(2008),Shaikh(2009))" - 5 67 - 0 "212340(15|Wang(2007),Conrad(2009),Durbin(2010),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400937OR female "research_filter, clinical_filter" RDPM47345 18 55374614 55586348 211735 Gain 3 0.865903 160 1331 chas 0 - 0 - 0 - --- 136 0 - - ChAS 18q21.31 - ATP8B1 1 ATP8B1 1 ATP8B1 - - "98774(2|Pinto(2007),Mills(2006))" 742(1|Pang(2010)) 1 136 - 0 "101244(14|Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400554WB male clinical_filter PBCS27067 14 106525299 106736911 211613 Gain 3 0.887064 48 4502 chas 14.41 Gain 19.27 Gain 0 - GainGain- 98 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "211613(59|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 50 98 - 0 "211613(504|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400422PN male research_filter LHRU87236 1 189326337 189537683 211347 Loss 1 0.907737 167 1273 chas 100 Loss 100 Loss 100 Loss LossLossLoss 131 99.83 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - "211347(16|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Redon(2006),McCarroll(2008),Zogopoulos(2007))" 708(1|Perry(2008)) - 131 - 0 "211347(48|Wang(2007),Pinto(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Shaikh(2009),Campbell(2011),Park(2010),Redon(2006),Jakobsson(2008),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401038LN female "research_filter, clinical_filter" VGND49817 Y 25848007 26059293 211287 Gain 2 0.873395 48 4495 chas 100 Gain 0 - 0 - Gain-- 108 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "211287#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "211287(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 107 - 0 "211287(5|Locke(2006),McCarroll(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401735LE male research_filter BNID76344 12 93120894 93332082 211189 Gain 3 0.903772 206 1030 chas 94.75 Gain 95.45 Gain 95.47 Gain GainGainGain 99 96.36 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q22 - "EEA1,PLEKHG7" 2 "EEA1,PLEKHG7" 2 - - - 24001(1|Shaikh(2009)) "1231(2|Conrad(2009),Ahn(2009))" 1 99 - 0 "211189(23|Conrad(2009),Ahn(2009),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" YTOE66394 Y 25849444 26060540 211097 Loss 0 0.847755 48 4491 chas 100 Loss 0 - 0 - Loss-- 106 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "211097#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "211097(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 106 - 0 "211097(5|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" YWSA20061 22 16888900 17099631 210732 Gain 3 0.907182 80 2667 chas 100 Gain 100 Gain 100 Gain GainGainGain 64 94.34 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.1 - "psiTPTE22,CCT8L2" 2 "psiTPTE22,CCT8L2" 2 - "210732#1%""Cat-Eye Syndrome (Type I)"":18591860" - "210732(39|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Pinto(2007),Shaikh(2009),Park(2010),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" "586(2|Wheeler(2008),Perry(2008))" 96 64 - 0 "210732(81|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Park(2010),Jakobsson(2008),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" RXRT66436 4 74780568 74990442 209875 Gain 3 0.897059 177 1192 chas 98.2 Gain 98.78 Gain 99.65 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.3 - "CXCL3,CXCL2,CXCL5,PPBP,PF4,PPBPL2" 6 "CXCL3,CXCL2,CXCL5,PPBP,PF4,PPBPL2" 6 - - - "14651(4|de Smith(2007),Conrad(2009),McKernan(2009),Pang(2010))" 110(1|Mills(2006)) 1 110 - 0 "209875(17|Conrad(2009),McKernan(2009),Durbin(2010),Pang(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" HOIC14625 5 12571916 12781760 209845 Loss 1 0.926076 332 633 chas 99.81 Loss 99.9 Loss 99.9 Loss LossLossLoss 109 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "176227(8|Wang(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Kidd(2008),Park(2010),Shaikh(2009))" - - 109 - 0 "209845(33|Wang(2007),Pang(2010),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" CAEK98371 1 33362311 33572082 209772 Gain 3 0.90261 228 924 chas 91.87 Gain 97.12 Gain 98.83 Gain GainGainGain 102 99.95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p35.1 - "AK2,TMEM54,RNF19B,ADC" 4 "AK2,TMEM54,RNF19B,ADC" 4 AK2 - - "28482(8|Levy(2007),Ahn(2009),Wheeler(2008),Shaikh(2009),Bentley(2008))" - 1 102 - 0 "209772(23|Teague(2010),Ahn(2009),Wong(2007),Durbin(2010),Bentley(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" LHRU87236 7 62623531 62833286 209756 Loss 1 0.868574 17 13109 chas 0 - 0 - 0 - --- 51 0 - - ChAS 7q11.21 - "LOC100287834,LOC100287704,LOC643955" 3 "LOC100287834,LOC100287704,LOC643955" 3 - - 145587(1|Kidd(2008)) "209756(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 881(3|Perry(2008)) 91 51 - 0 "209756(48|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Sharp(2005),Altshuler(2010),Durbin(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 401038LN female - ZKED26020 3 60067512 60277128 209617 Loss 1 0.931395 346 607 chas 99.83 Loss 99.91 Loss 99.91 Loss LossLossLoss 223 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.2 - FHIT 1 - 0 - - - "209617(4|McKernan(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007))" 540(1|Matsuzaki(2009)) - 221 FHIT#asd_candidate 1 "209617(8|Wong(2007),McKernan(2009),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" XHZD61935 14 39116739 39326084 209346 Loss 1 0.909859 164 1284 chas 95.77 Loss 95.83 Loss 100 Loss LossLossLoss 126 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.1 - LOC283547 1 LOC283547 1 - - - 1363(1|McKernan(2009)) 1(1|Levy(2007)) - 126 - 0 "172321(10|McKernan(2009),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" MECH38806 10 17927541 18136735 209195 Loss 1 0.866031 36 5977 chas 0 - 0 - 95.86 Loss #NAME? 14 NA NA NA "ChAS,PTK" 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 76 14 - 0 "209195(14|Teague(2010),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_no algo_yes NA 400671PP male "research_filter, clinical_filter" PDHC59420 Y 20670148 20879124 208977 Loss 0 0.822916 148 1421 chas 100 Loss 0 - 0 - Loss-- 126 NA NA NA "ChAS,IPN" Yq11.222 - "HSFY1,HSFY2,TTTY9A,TTTY9B" 4 "HSFY1,HSFY2,TTTY9A,TTTY9B" 4 - "208977#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "89662(3|Matsuzaki(2009),Perry(2008))" - 81 125 - 0 "208977(4|Levy(2007),Redon(2006),Perry(2008))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" TMXA54308 7 6854365 7062903 208539 Gain 3 0.897264 90 2343 chas 76.66 Gain 99.98 Gain 99.88 Gain GainGainGain 89 NA NA NA "ChAS,IPN,NXS,PTK" 7p22.1 - CCZ1B 1 CCZ1B 1 - - "135679(2|Feuk(2005),Kidd(2008))" "208539(9|Conrad(2009),Korbel(2007),Redon(2006),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),McCarroll(2008))" - 89 89 - 0 "208539(40|Conrad(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" CHSN35204 X 110601359 110809103 207745 Gain 2 0.945851 840 247 chas 99.99 Gain 0 - 0 - Gain-- 96 99.42 Gain "BS,GTC,IP6" "ChAS,IPN" Xq23 - "DKFZp686D0853,DCX" 2 "DKFZp686D0853,DCX" 2 DCX - - - - - 96 DCX#id_known 1 34069(1|Kidd(2008)) TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" JSIF57066 14 22761524 22969094 207571 Gain 3 0.871193 276 754 chas 0 - 22.29 Gain 0 - -Gain- 159 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "207571(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 159 - 0 "207571(130|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400512LR female "research_filter, clinical_filter" PDHC59420 14 32560196 32767649 207454 Gain 3 0.906509 156 1338 chas 92.55 Gain 95.26 Gain 95.26 Gain GainGainGain 100 NA NA NA "ChAS,IPN,NXS,PTK" 14q12 - ARHGAP5 1 ARHGAP5 1 - - - - "449(5|Park(2010),Levy(2007),Mills(2006))" 5 100 - 0 "197383(7|Park(2010),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" ICDL89338 14 22722258 22929410 207153 Gain 3 0.870754 267 778 chas 0 - 67.26 Gain 100 Gain #NAME? 148 96.6 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "207153(23|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 148 - 0 "207153(126|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" JDGZ96096 10 107110991 107318118 207128 Gain 3 0.902022 148 1409 chas 88.66 Gain 99.88 Gain 99.88 Gain GainGainGain 122 NA NA NA "ChAS,IPN,NXS,PTK" 10q25.1 - - 0 - 0 - - - 196440(1|Pinto(2007)) "1123(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 122 - 0 "207128(36|Ahn(2009),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401482CB male "research_filter, clinical_filter" OBHQ36250 14 22597856 22804704 206849 Loss 1 0.861544 414 500 chas 0 - 91.05 Loss 100 Loss #NAME? 212 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "206849(13|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 212 - 0 "206849(72|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401011PJ female "research_filter, clinical_filter" PTWY73614 15 71229947 71436723 206777 Gain 3 0.902599 187 1111 chas 92.75 Gain 98.72 Gain 98.72 Gain GainGainGain 98 97.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q23 - "LRRC49,THSD4,CT62" 3 "LRRC49,THSD4,CT62" 3 - - - - - 1 98 - 0 "155760(8|Itsara(2009),Kidd(2008),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401540GM male "research_filter, clinical_filter" CAYM40684 14 22752657 22959362 206706 Gain 3 0.865516 270 768 chas 0 - 0 - 0 - --- 143 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "206706(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 143 - 0 "206706(129|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401986LC female clinical_filter IBGK33359 16 46467498 46673971 206474 Gain 3 0.899822 315 657 chas 85.52 Gain 100 Gain 100 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 16q11.2 - "SHCBP1,ANKRD26P1" 2 "SHCBP1,ANKRD26P1" 2 - - - "33120(8|Conrad(2009),McKernan(2009),Korbel(2007),Cooper(2008),Matsuzaki(2009))" 163(1|Ahn(2009)) 18 69 - 0 "206474(53|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2008),McKernan(2009),Durbin(2010),Wong(2007),Cooper(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" PYWH93436 12 129164153 129370111 205959 Gain 3 0.908088 216 957 chas 28.35 Gain 93.4 Gain 96.85 Gain GainGainGain 179 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "12q24.33,12q24.32" - "SLC15A4,TMEM132C,GLT1D1" 3 "SLC15A4,TMEM132C,GLT1D1" 3 - - - "69034(17|Wang(2007),Ahn(2009),Pinto(2007),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Park(2010),Wheeler(2008),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" "3252(13|Conrad(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Shaikh(2009),Mills(2006))" 1 179 - 0 "205959(45|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Perry(2008),Wang(2007),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Itsara(2009),Altshuler(2010),Park(2010),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400270BD female "research_filter, clinical_filter" ZVRQ32621 9 416748 622360 205613 Gain 3 0.897116 354 582 chas 97.78 Gain 98.9 Gain 98.89 Gain GainGainGain 262 99.66 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.3 - "DOCK8,KANK1" 2 "DOCK8,KANK1" 2 "DOCK8,KANK1" - - "205613(58|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "2397(13|Conrad(2009),Matsuzaki(2009),Wang(2008),McKernan(2009),Bentley(2008),Wheeler(2008),Mills(2006))" - 262 - 0 "205613(151|Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401176BD male "research_filter, clinical_filter" JAVP94180 15 31073736 31279343 205608 Gain 3 0.900029 156 1326 chas 92.13 Gain 99.64 Gain 99.64 Gain GainGainGain 117 NA NA NA "ChAS,IPN,NXS,PTK" "15q13.2,15q13.3" - "FAN1,MTMR10" 2 "FAN1,MTMR10" 2 - "205608#1%""15q13.3 microdeletion syndrome"":1931488" 205608(1|Kidd(2008)) "199761(6|Conrad(2009),Redon(2006),Perry(2008),de Smith(2007),Altshuler(2010),Park(2010))" 813(2|Levy(2007)) 37 117 - 0 "205608(24|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" GXLR90543 1 239350728 239555593 204866 Gain 3 0.901385 130 1588 chas 95.63 Gain 99.97 Gain 100 Gain GainGainGain 131 NA NA NA "ChAS,IPN,NXS,PTK" 1q43 - - 0 - 0 - - - 4660(1|Mills(2006)) 101(1|Wheeler(2008)) - 131 - 0 "80283(15|Wong(2007),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401330RR female "research_filter, clinical_filter" BDAF16773 1 102648232 102852953 204722 Loss 1 0.90401 160 1287 chas 96.11 Loss 98.05 Loss 98.05 Loss LossLossLoss 161 96.07 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - - 0 - 0 - - - "204722(6|Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "693(5|McCarroll(2005),Conrad(2005))" - 161 - 0 "204722(27|Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),Shaikh(2009),Park(2010),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" PXVB29564 1 102648232 102852953 204722 Loss 1 0.922622 160 1287 chas 89.52 Loss 98.05 Loss 98.05 Loss LossLossLoss 161 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - - 0 - 0 - - - "204722(6|Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "693(5|McCarroll(2005),Conrad(2005))" - 161 - 0 "204722(27|Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),Shaikh(2009),Park(2010),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" FSQK31243 18 67670524 67874814 204291 Loss 1 0.915282 196 1047 chas 92.6 Loss 96.3 Loss 96.3 Loss LossLossLoss 106 92.49 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q22.2 - RTTN 1 RTTN 1 - - - 204291(1|de Smith(2007)) - - 106 - 0 "204291(7|Pinto(2011),Teague(2010),Wong(2007),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400863SS female "research_filter, clinical_filter" GWRR97762 X 6455150 6659212 204063 Gain 3 0.910282 902 226 chas 87.22 Gain 0 - 0 - Gain-- 147 96.54 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - "204063#1%""Steroid sulphatase deficiency (STS)"":1725741" - "204063(14|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 1 147 - 0 "204063(15|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" JVBB89605 17 21328666 21532485 203820 Loss 1 0.901181 56 3705 chas 89.2 Loss 94.81 Loss 99.37 Loss LossLossLoss 98 91.47 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p11.2 - C17orf51 1 C17orf51 1 - - - "203820(21|Wang(2007),Korbel(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "2315(7|Conrad(2009),Perry(2008),Bentley(2008))" 90 98 - 0 "203820(42|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" CZJD30358 14 22746792 22950491 203700 Gain 3 0.868127 281 727 chas 0 - 14.83 Gain 0 - -Gain- 145 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "203700(23|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 145 - 0 "203700(127|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400063BR female "research_filter, clinical_filter" UEDI98118 9 11864218 12067914 203697 Loss 1 0.896215 124 1656 chas 99.99 Loss 98.48 Loss 99.3 Loss LossLossLoss 161 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "203697(49|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 1 161 - 0 "203697(78|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),McCarroll(2006),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Campbell(2011),Park(2010),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" ZQHJ50767 X 6455150 6658781 203632 Gain 3 0.904616 900 226 chas 88.51 Gain 0 - 0 - Gain-- 147 96.75 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - "203632#1%""Steroid sulphatase deficiency (STS)"":1725741" - "203632(14|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 1 147 - 0 "203632(15|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" NBJX82400 12 93120894 93323931 203038 Gain 3 0.896723 204 1000 chas 91.85 Gain 98.08 Gain 98.46 Gain GainGainGain 94 98.61 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q22 - "EEA1,PLEKHG7" 2 "EEA1,PLEKHG7" 2 - - - 24001(1|Shaikh(2009)) "1231(2|Conrad(2009),Ahn(2009))" 2 94 - 0 "203038(23|Conrad(2009),Ahn(2009),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400014SL female "research_filter, clinical_filter" MWKR26526 14 22738180 22940284 202105 Loss 1 0.85899 266 762 chas 0 - 0 - 0 - --- 132 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "202105(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 132 - 0 "202105(121|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 400225CJ male clinical_filter BQFC38547 14 106044263 106246289 202027 Gain 3 0.911964 31 6734 chas 0 - 0 - 0 - --- 34 0 - - ChAS 14q32.33 - - 0 - 0 - - "63433(3|Kidd(2008),Ahn(2009))" "202027(88|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Park(2010),Pang(2010),Kidd(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Itsara(2009),Shaikh(2009))" "5696(19|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 34 - 0 "202027(488|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_no 400238BB female - KWYE93203 Y 27022376 27224389 202014 Gain 2 0.858966 44 4698 chas 92.1 Gain 0 - 0 - Gain-- 17 NA NA NA "ChAS,IPN" Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 - "202014#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "202014(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 17 - 0 "202014(9|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" FALSE TRUE ipn_yes algo_yes NA 401357MH male research_filter BOWS70612 Y 27022376 27224389 202014 Gain 2 0.868135 44 4698 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS Yq11.23 - "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 "DAZ3,DAZ2,TTTY4,BPY2,DAZ4,TTTY4C,TTTY4B,BPY2B,BPY2C" 9 - "202014#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "202014(8|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 17 - 0 "202014(9|Locke(2006),Campbell(2011),McCarroll(2008),Durbin(2010),Sharp(2005))" FALSE TRUE ipn_no algo_no NA 401975VD male - NKNM36178 3 163096351 163297620 201270 Gain 3 0.894839 100 2033 chas 89.67 Gain 89.71 Gain 0 - GainGain- 92 NA NA NA "ChAS,IPN,NXS" 3q26.1 - - 0 - 0 - - - "201270(3|Pang(2010),Kidd(2008),Pinto(2007))" - - 92 - 0 "201270(23|Teague(2010),Wong(2007),Jakobsson(2008),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400668TD male "research_filter, clinical_filter" OBHQ36250 15 57032437 57233655 201219 Gain 3 0.90036 151 1341 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 15q21.3 - "TCF12,LOC145783" 2 "TCF12,LOC145783" 2 - - - 6500(1|Park(2010)) 172(1|Ahn(2009)) - 92 - 0 "201219(11|Itsara(2009),Park(2010),Ahn(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401011PJ female "research_filter, clinical_filter" XZZR64566 2 35610752 35811650 200899 Gain 3 0.904726 136 1488 chas 83.79 Gain 100 Gain 100 Gain GainGainGain 149 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "27349(16|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Kidd(2008),Altshuler(2010),Cooper(2008),McCarroll(2005),Jakobsson(2008),Shaikh(2009))" - - 148 - 0 "200899(52|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Campbell(2011),Jakobsson(2008),McCarroll(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400996MC male "research_filter, clinical_filter" FCXX78522 1 104102804 104303626 200823 Gain 4 0.948473 23 9128 chas 11.66 Gain 28.89 Gain 27.27 Gain GainGainGain 58 28.05 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "200570(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 88 58 - 0 "200823(273|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401117GM male research_filter GNMX63810 1 104102831 104303626 200796 Gain 3 0.897154 22 9561 chas 11.66 Gain 24.92 Gain 0 - GainGain- 58 NA NA NA "ChAS,IPN,NXS" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "200570(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 88 58 - 0 "200796(273|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401067BD male research_filter XWKR95070 14 28104675 28305219 200545 Gain 3 0.88855 136 1485 chas 60.58 Gain 60.9 Gain 100 Gain GainGainGain 108 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q12 - LOC100505967 1 LOC100505967 1 - - - "98802(4|Conrad(2009),Kim(2009),Matsuzaki(2009),Perry(2008))" 390(1|Wheeler(2008)) 44 108 - 0 "200545(18|Conrad(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pinto(2011),Jakobsson(2008),Kim(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" NUHG48677 X 126145136 126345665 200530 Loss 1 0.929181 90 2253 chas 100 Loss 0 - 0 - Loss-- 108 100 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - "195518(3|McKernan(2009),Shaikh(2009))" 1(1|Levy(2007)) - 108 - 0 "200530(9|Kidd(2008),McKernan(2009),Durbin(2010),Shaikh(2009),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 40050SB female "research_filter, clinical_filter" CKLN80228 7 151755927 151956453 200527 Gain 3 0.907298 170 1186 chas 75.41 Gain 96.46 Gain 96.46 Gain GainGainGain 86 94.24 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q36.1 - "MLL3,GALNT11" 2 "MLL3,GALNT11" 2 - - - "64932(14|Conrad(2009),Korbel(2007),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010))" - 27 86 - 0 "182866(23|Conrad(2009),Wong(2007),Perry(2008),Ju(2010),Durbin(2010),Pang(2010),Korbel(2007),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400695PH female "research_filter, clinical_filter" GYLD25146 6 162712347 162912832 200486 Gain 3 0.905531 246 818 chas 41.22 Gain 93.34 Gain 93.32 Gain GainGainGain 183 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 PARK2 1 PARK2 - - "200486(24|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "2742(7|McKernan(2009),Matsuzaki(2009),Perry(2008),Bentley(2008))" - 182 PARK2#asd_candidate 1 "200486(60|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Pinto(2007),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Altshuler(2010),Shaikh(2009),Park(2010),Redon(2006),Mills(2006),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400132HN female "research_filter, clinical_filter" IJPA28382 15 56210318 56409868 199551 Gain 3 0.895483 160 1255 chas 80.03 Gain 100 Gain 100 Gain GainGainGain 114 99.63 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q21.3 - "RFX7,NEDD4" 2 "RFX7,NEDD4" 2 - - - "69041(6|Itsara(2009),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Park(2010))" - 3 114 - 0 "182233(26|Teague(2010),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400103BN female "research_filter, clinical_filter" OZXZ40778 17 21311580 21510992 199413 Gain 3 0.892879 56 3625 chas 87.44 Gain 99.98 Gain 88.63 Gain GainGainGain 93 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - "C17orf51,KCNJ12,KCNJ18" 3 "C17orf51,KCNJ12,KCNJ18" 3 KCNJ18 - - "199413(24|Wang(2007),Ahn(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Itsara(2009),Pinto(2007),Zogopoulos(2007),Shaikh(2009),Mills(2006))" "2315(7|Conrad(2009),Perry(2008),Bentley(2008))" 86 93 - 0 "199413(73|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" BSJX70163 6 1192422 1391210 198789 Gain 3 0.897873 228 875 chas 99.98 Gain 99.99 Gain 100 Gain GainGainGain 210 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - "FOXQ1,FOXF2" 2 "FOXQ1,FOXF2" 2 - - - "15738(3|Park(2010),McKernan(2009))" "1917(12|Pang(2010),Levy(2007),Matsuzaki(2009),Bentley(2008))" - 210 - 0 "81948(56|Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401406KF male "research_filter, clinical_filter" UVWE33125 4 168795302 168994080 198779 Loss 1 0.908476 113 1774 chas 99.18 Loss 91.45 Loss 92.84 Loss LossLossLoss 173 93.6 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "198779(29|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 172 - 0 "198779(130|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401423BA male "research_filter, clinical_filter" VWYL75938 10 17938195 18136735 198541 Loss 1 0.86143 32 6404 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 75 13 - 0 "198541(14|Teague(2010),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_no algo_no NA 401006ES female clinical_filter ENVJ37912 10 17938195 18136735 198541 Loss 1 0.865385 32 6404 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 75 13 - 0 "198541(14|Teague(2010),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_no algo_no NA 400532MH male clinical_filter UJRI14149 10 107109582 107308079 198498 Gain 4 0.930681 146 1368 chas 99.99 Gain 100 Gain 99.93 Gain GainGainGain 119 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 10q25.1 - - 0 - 0 - - - 197849(1|Pinto(2007)) "1123(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 119 - 0 "198498(36|Ahn(2009),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400227MM female "research_filter, clinical_filter" BDAF16773 10 17297080 17495001 197922 Loss 1 0.904228 220 903 chas 100 Loss 100 Loss 100 Loss LossLossLoss 159 93.8 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "10p13,10p12.33" - "ST8SIA6,LOC100128098" 2 "ST8SIA6,LOC100128098" 2 - - - "4788(2|Park(2010),Conrad(2009))" "719(2|Park(2010),Mills(2006))" - 159 - 0 "90739(79|Teague(2010),Wong(2007),Conrad(2009),Durbin(2010),Kidd(2010b),Park(2010),Pinto(2011),Bentley(2008),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" NFGH10073 1 104109341 104307231 197891 Gain 4 0.927176 22 9423 chas 11.71 Gain 100 Gain 98.08 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "197891(36|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 56 - 0 "197891(271|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400553PP male research_filter YQAG97358 14 22761524 22959362 197839 Loss 1 0.855328 256 775 chas 0 - 0 - 0 - --- 137 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "197839(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 137 - 0 "197839(126|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401499JR male clinical_filter OZXZ40778 14 106530534 106728149 197616 Loss 1 0.893336 42 4819 chas 20.52 Loss 18.49 Loss 10.57 Loss LossLossLoss 93 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "197616(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 550(1|Park(2010)) 53 93 - 0 "197616(476|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" OFVS61400 15 34671746 34868996 197251 Loss 1 0.899355 8 28178 chas 0 - 0 - 0 - --- 92 79.76 Loss "BS,GTC,IP6" ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 401143LK female - FSQK31243 15 34671746 34868996 197251 Loss 1 0.88586 8 28178 chas 0 - 0 - 0 - --- 92 82.83 Loss "BS,GTC,IP6" ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400863SS female - WMQY51169 15 34671746 34868996 197251 Loss 1 0.894329 8 28178 chas 0 - 0 - 0 - --- 92 82.39 Loss "BS,GTC,IP6" ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400364SS male - PCGN60952 15 34671746 34868996 197251 Loss 1 0.891896 8 28178 chas 0 - 0 - 0 - --- 92 NA NA NA ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401364GM male - PRED73338 15 34671746 34868996 197251 Loss 1 0.882171 8 28178 chas 0 - 0 - 0 - --- 92 NA NA NA ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401183HP female - XNQF62194 15 34671746 34868996 197251 Loss 1 0.880346 8 28178 chas 0 - 0 - 0 - --- 92 NA NA NA ChAS 15q14 - "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 "MIR1233-1,GOLGA8B,GOLGA8A,MIR1233-2" 4 - - - "197251(90|Sebat(2004),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2005),Kim(2009),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Perry(2008),Itsara(2009),Levy(2007),McCarroll(2008),Park(2010),Ju(2010))" "3505(12|Wheeler(2008),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 98 92 - 0 "197251(557|Teague(2010),Redon(2006),Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Wang(2007),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401690HA male - PTWY73614 16 55639139 55835988 196850 Gain 3 0.901692 255 775 chas 77.85 Gain 81.79 Gain 89.43 Gain GainGainGain 188 90.2 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16q12.2 - "CES1P2,SLC6A2,CES1P1" 3 "CES1P2,SLC6A2,CES1P1" 3 SLC6A2 - "77865(6|Pang(2010),Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "43451(14|Conrad(2009),Perry(2008),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" "1013(4|Levy(2007),Kim(2009),Ahn(2009),Mills(2006))" 38 188 - 0 "182109(173|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Tuzun(2005),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401540GM male "research_filter, clinical_filter" JITM64437 1 196716413 196913251 196839 Loss 1 0.913784 70 2852 chas 24.99 Loss 79.14 Loss 81.05 Loss LossLossLoss 171 88.35 "-,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.3 - "CFHR2,CFHR3,CFHR1,CFHR4,CFH" 5 "CFHR2,CFHR3,CFHR1,CFHR4,CFH" 5 "CFHR3,CFHR1,CFH" - - "196839(69|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Wang(2008),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "1508(3|McCarroll(2005),Conrad(2005),Mills(2006))" 70 172 - 0 "196839(416|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400661AD male "research_filter, clinical_filter" MVJH83535 X 49173886 49370133 196248 Gain 2 0.878026 16 13083 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196248(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 5 - 0 "146249(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401771OS male - OWBB95825 X 49173938 49370133 196196 Gain 2 0.907247 14 15092 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196196(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "146197(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401275SJ male - ZVRQ32621 X 49173938 49370133 196196 Gain 2 0.889843 14 15092 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196196(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "146197(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401176BD male - ZJYL67451 X 49173938 49370133 196196 Gain 2 0.912853 14 15092 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196196(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "146197(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401025SM male - YREU97751 X 49173938 49370133 196196 Gain 2 0.900717 14 15092 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196196(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "146197(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401478RD male - VZCC67569 X 49173938 49370133 196196 Gain 2 0.910977 14 15092 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "196196(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "146197(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400906BR male - XWKR95070 6 67143009 67338924 195916 Gain 3 0.893202 152 1297 chas 90.18 Gain 99.94 Gain 100 Gain GainGainGain 172 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q12 - - 0 - 0 - - - "104079(5|Park(2010),Conrad(2009),Matsuzaki(2009),Simon-Sanchez(2007))" "1925(8|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010))" - 172 - 0 "135784(34|Conrad(2009),Ahn(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Shaikh(2009),Park(2010),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" XKMM87171 X 49174229 49370133 195905 Gain 2 0.92099 12 17809 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400634MP male - ELXG87337 X 49174229 49370133 195905 Gain 2 0.93929 12 17809 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401634CH male - EMAP66239 X 49174229 49370133 195905 Gain 2 0.890433 12 17809 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401618HR male - MDAA91863 X 49174229 49370133 195905 Gain 2 0.915347 12 17809 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400425SL male - EZDG77492 X 49174229 49370133 195905 Gain 2 0.907871 12 17809 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400308SP male - JQGN11749 X 49174229 49370133 195905 Gain 2 0.887043 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400534ME male - BDQN41691 X 49174229 49370133 195905 Gain 2 0.939479 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401602PR male - KNEY83753 X 49174229 49370133 195905 Gain 2 0.925905 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400411TG male - FYVR80369 X 49174229 49370133 195905 Gain 2 0.900683 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401448BJ male - ZKCL87954 X 49174229 49370133 195905 Gain 2 0.913091 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401698SB male - QXHS37749 X 49174229 49370133 195905 Gain 2 0.913421 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401943KA male - EZOV24426 X 49174229 49370133 195905 Gain 2 0.891142 12 17809 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195905(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145906(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400454RE male - AXJJ81139 X 49174258 49370133 195876 Gain 2 0.895139 11 19587 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 "GAGE8,GAGE1,GAGE5,GAGE4,GAGE7,GAGE6,GAGE2D,GAGE2E,GAGE2A,GAGE2B,GAGE2C,GAGE12H,GAGE12I,GAGE12J,GAGE12B,GAGE12C,GAGE12D,GAGE12E,GAGE12F,GAGE12G,GAGE10,GAGE13" 22 - - - "195876(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "145877(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400432VA male - OEHV36421 22 25726662 25922334 195673 Gain 3 0.901685 71 2795 chas 94.26 Gain 97.96 Gain 100 Gain GainGainGain 265 98.15 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,CRYBB2P1" 2 "LRP5L,CRYBB2P1" 2 - - - "195673(64|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "621(2|Conrad(2005),Bentley(2008))" 65 264 - 0 "195673(218|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401997HB male "research_filter, clinical_filter" BDQN41691 22 25726662 25922334 195673 Loss 1 0.922772 71 2795 chas 94.26 Loss 95.09 Loss 100 Loss LossLossLoss 265 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,CRYBB2P1" 2 "LRP5L,CRYBB2P1" 2 - - - "195673(64|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "621(2|Conrad(2005),Bentley(2008))" 65 264 - 0 "195673(218|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401602PR male "research_filter, clinical_filter" VAON88685 22 25726776 25922334 195559 Gain 3 0.901808 68 2918 chas 94.26 Gain 95.08 Gain 95.08 Gain GainGainGain 262 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,CRYBB2P1" 2 "LRP5L,CRYBB2P1" 2 - - - "195559(64|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "621(2|Conrad(2005),Bentley(2008))" 65 261 - 0 "195559(218|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" YDKF16445 9 136447926 136643453 195528 Gain 3 0.896853 156 1261 chas 64.48 Gain 71.57 Gain 100 Gain GainGainGain 135 NA NA NA "ChAS,IPN,NXS,PTK" 9q34.2 - "DBH,SARDH,VAV2" 3 "DBH,SARDH,VAV2" 3 "DBH,SARDH" - - "68578(9|Ahn(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Pang(2010),Shaikh(2009))" "3630(11|Conrad(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Park(2010))" 3 135 - 0 "167063(95|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401442WR male "research_filter, clinical_filter" FCXX78522 10 98275008 98470301 195294 Gain 3 0.913713 231 849 chas 96.38 Gain 97.95 Gain 97.38 Gain GainGainGain 131 97.93 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q24.1 - "PIK3AP1,TM9SF3" 2 "PIK3AP1,TM9SF3" 2 - - - - "844(2|Park(2010),Mills(2006))" 1 131 - 0 "195294(12|Park(2010),Teague(2010),Mills(2006),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" STES59258 10 68356145 68551219 195075 Loss 1 0.918946 232 844 chas 90.55 Loss 90.6 Loss 90.58 Loss LossLossLoss 153 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "71601(5|Itsara(2009),Park(2010),Redon(2006),Shaikh(2009),Perry(2008))" 724(1|Conrad(2009)) - 153 - 0 "195075(36|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" INSC49339 16 75266607 75461625 195019 Loss 1 0.920549 212 924 chas 91.81 Loss 93.55 Loss 93.55 Loss LossLossLoss 105 NA NA NA "ChAS,IPN,NXS,PTK" 16q23.1 - "BCAR1,CFDP1" 2 "BCAR1,CFDP1" 2 - - "31609(3|Kidd(2008),Tuzun(2005))" "114798(6|Park(2010),Ju(2010),Shaikh(2009),Perry(2008),Simon-Sanchez(2007))" "858(2|Pang(2010),Mills(2006))" 1 105 - 0 "195019(44|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Tuzun(2005),Pinto(2011),Redon(2006),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" AVAH45014 14 35529876 35724244 194369 Gain 3 0.895617 204 957 chas 93.71 Gain 99.8 Gain 100 Gain GainGainGain 95 NA NA NA "ChAS,IPN,NXS,PTK" 14q13.2 - "PPP2R3C,FAM177A1,KIAA0391" 3 "PPP2R3C,FAM177A1,KIAA0391" 3 - - - "40510(8|Wang(2007),Conrad(2009),McKernan(2009),Kidd(2008),Altshuler(2010),Cooper(2008),Park(2010),Kim(2009))" "599(3|Conrad(2009),Matsuzaki(2009))" - 95 - 0 "41694(53|Conrad(2009),Wang(2007),Kidd(2010b),McKernan(2009),Durbin(2010),Kidd(2008),Altshuler(2010),Campbell(2011),Park(2010),Pinto(2011),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" CHNV74218 1 104109341 104303626 194286 Gain 4 0.93786 20 10225 chas 11.92 Gain 100 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "194286(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 55 - 0 "194286(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400837HN female research_filter LCWB88916 1 104109341 104303626 194286 Gain 3 0.914881 20 10225 chas 11.92 Gain 27.63 Gain 0 - GainGain- 55 NA NA NA "ChAS,IPN,NXS" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "194286(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 55 - 0 "194286(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401725MR male research_filter SUUF34898 14 22749289 22943573 194285 Loss 1 0.855759 268 727 chas 0 - 0 - 60.14 Loss #NAME? 133 100 Loss "BS,GTC,IP6" "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "194285(23|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 133 - 0 "194285(124|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400669LD male "research_filter, clinical_filter" TUOI10912 7 102138955 102333120 194166 Loss 1 0.90433 16 12944 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 7q22.1 - "UPK3BL,SPDYE2,SPDYE2L,RASA4,POLR2J2,POLR2J3" 6 "UPK3BL,SPDYE2,SPDYE2L,RASA4,POLR2J2,POLR2J3" 6 - - - "194166(24|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Kidd(2008),Cooper(2008),Tuzun(2005))" 339(1|Wheeler(2008)) 100 9 - 0 "194166(167|Conrad(2009),Ahn(2009),Wong(2007),Perry(2008),Kidd(2010b),Alkan(2009),Locke(2006),Schuster(2010),Durbin(2010),Kidd(2008),Korbel(2007),Cooper(2008),Tuzun(2005),Perry(2008b),Pinto(2011),Sharp(2005),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401792KR male - YKWT45889 1 104109341 104303335 193995 Gain 4 0.948377 18 11411 chas 11.94 Gain 26.54 Gain 26.54 Gain GainGainGain 53 81.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "193995(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 53 - 0 "193995(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400094RS male research_filter TFVC48426 1 104109341 104303335 193995 Gain 4 0.943548 18 11411 chas 11.94 Gain 27.35 Gain 27.35 Gain GainGainGain 53 81.89 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "193995(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 53 - 0 "193995(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400501SJ male research_filter GPXE42967 1 104109341 104303335 193995 Gain 4 0.974695 18 11411 chas 11.94 Gain 77.72 Gain 27.99 Gain GainGainGain 53 81.89 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "193995(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 53 - 0 "193995(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400006DK female research_filter XCWR96625 1 104109341 104303335 193995 Gain 4 0.936943 18 11411 chas 11.78 Gain 99.99 Gain 100 Gain GainGainGain 53 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - "AMY2B,LOC648740,AMY2A,AMY1A,AMY1C,AMY1B" 6 "LOC648740,AMY2B,AMY2A,AMY1A,AMY1C,AMY1B" 6 - - 18904(1|Kidd(2008)) "193995(33|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 91 53 - 0 "193995(270|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),De(Smith_2007),Wang(2007),Alkan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400158FB male research_filter YMTT86375 15 39195053 39388882 193830 Gain 3 0.900127 188 1036 chas 95.75 Gain 96.47 Gain 96.48 Gain GainGainGain 189 99.17 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q14 - - 0 - 0 - - - "16145(7|Pang(2010),Conrad(2009),McKernan(2009),Park(2010),Ju(2010))" "1575(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008))" - 189 - 0 "158449(59|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400797ST male "research_filter, clinical_filter" WWCZ24238 15 39195053 39388882 193830 Gain 3 0.902934 188 1036 chas 95.75 Gain 98.61 Gain 98.19 Gain GainGainGain 189 NA NA NA "ChAS,IPN,NXS,PTK" 15q14 - - 0 - 0 - - - "16145(7|Pang(2010),Conrad(2009),McKernan(2009),Park(2010),Ju(2010))" "1575(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008))" - 189 - 0 "158449(59|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401736BF male "research_filter, clinical_filter" OPOQ31165 20 14718380 14912034 193655 Loss 1 0.927517 161 1210 chas 99.82 Loss 98.65 Loss 99.2 Loss LossLossLoss 215 98.59 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - "MACROD2-AS1,MACROD2" 2 MACROD2-AS1 1 - - - "193655(36|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1(1|Levy(2007)) - 215 - 0 "193655(115|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" ZEGT44347 10 68356145 68549709 193565 Loss 1 0.925038 231 841 chas 91.26 Loss 91.53 Loss 92.59 Loss LossLossLoss 152 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "71601(5|Itsara(2009),Park(2010),Redon(2006),Shaikh(2009),Perry(2008))" 724(1|Conrad(2009)) - 152 - 0 "193565(36|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401609MB female "research_filter, clinical_filter" SLNP19984 14 22749289 22942619 193331 Loss 1 0.853021 265 732 chas 0 - 0 - 0 - --- 128 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "193331(23|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 128 - 0 "193331(122|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401152MV female clinical_filter TCSA61368 1 200633484 200826283 192800 Gain 3 0.910281 168 1154 chas 95.15 Gain 97.41 Gain 97.42 Gain GainGainGain 92 95.15 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q32.1 - "CAMSAP2,DDX59" 2 "CAMSAP2,DDX59" 2 - - - "13099(2|Park(2010),Mills(2006))" 107(1|Levy(2007)) - 92 - 0 "77026(8|Park(2010),Levy(2007),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" GTDY31038 4 99190924 99383471 192548 Gain 3 0.89418 292 661 chas 61.09 Gain 98.56 Gain 100 Gain GainGainGain 88 NA NA NA "ChAS,IPN,NXS,PTK" 4q23 - RAP1GDS1 1 RAP1GDS1 1 RAP1GDS1 - - 29763(1|Matsuzaki(2009)) - - 88 - 0 38916(1|Shaikh(2009)) TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" XTPE89033 X 49177801 49370133 192333 Gain 3 0.921415 10 21370 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400817MB male - VVDA27035 X 49177801 49370133 192333 Gain 2 0.877319 10 21370 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400377WJ male - YLVO48162 X 49177801 49370133 192333 Gain 2 0.834677 10 21370 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400876OG male - IWPA56866 X 49177801 49370133 192333 Loss 1 0.864654 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401700BN_1 female - RZMS47755 X 49177801 49370133 192333 Gain 4 0.893244 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400387HE female - AEJP39672 X 49177801 49370133 192333 Gain 3 0.944418 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401234MB male - RXRT66436 X 49177801 49370133 192333 Gain 2 0.88318 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401414CR male - NQMZ66306 X 49177801 49370133 192333 Gain 2 0.903388 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401801LA male - KIIK22313 X 49177801 49370133 192333 Gain 2 0.895393 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401496SL male - MFZZ13533 X 49177801 49370133 192333 Gain 2 0.873784 10 21370 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "192333(22|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 74 4 - 0 "142334(46|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400164SS male - VABQ19693 Y 16099876 16291999 192124 Gain 2 0.934094 236 817 chas 100 Gain 0 - 0 - Gain-- 119 0 - - "ChAS,IPN" Yq11.221 - "VCY,VCY1B" 2 "VCY,VCY1B" 2 - - - - - 36 119 - 0 "188882(4|Locke(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400493KH male "research_filter, clinical_filter" QNLU68354 17 779535 971097 191563 Gain 3 0.893768 196 982 chas 75.92 Gain 95.46 Gain 100 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 17p13.3 - "ABR,NXN,MIR3183,TIMM22" 4 "ABR,NXN,MIR3183,TIMM22" 4 - "191563#1%""Miller-Dieker syndrome (MDS)"":2545429" - "191563(46|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Redon(2006),Wheeler(2008),Ju(2010))" "6826(28|Conrad(2009),Matsuzaki(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 3 103 - 0 "191563(190|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401829FJ female "research_filter, clinical_filter" ZYTR30302 14 22747483 22938720 191238 Gain 3 0.867179 253 758 chas 0 - 0 - 0 - --- 124 0 - - ChAS 14q11.2 - - 0 - 0 - - - "191238(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 124 - 0 "191238(121|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400356MC female clinical_filter HQWW55061 14 106536991 106728149 191159 Loss 1 0.913159 40 4901 chas 17.84 Loss 16.87 Loss 10.9 Loss LossLossLoss 90 15.75 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "191159(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 550(1|Park(2010)) 55 90 - 0 "191159(462|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" SLNP19984 14 106536991 106728149 191159 Loss 1 0.896482 40 4901 chas 17.84 Loss 16.87 Loss 10.9 Loss LossLossLoss 90 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "191159(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 550(1|Park(2010)) 55 90 - 0 "191159(462|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" JFSR33951 4 39924299 40114810 190512 Gain 3 0.897853 156 1229 chas 73.42 Gain 99.68 Gain 100 Gain GainGainGain 80 99.26 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4p14 - "LOC344967,PDS5A,N4BP2" 3 "LOC344967,PDS5A,N4BP2" 3 - - - "128160(9|Conrad(2009),Ahn(2009),Matsuzaki(2009),McKernan(2009),Park(2010),Simon-Sanchez(2007))" "1550(3|Conrad(2009),Matsuzaki(2009),Mills(2006))" 1 80 - 0 "190512(46|Conrad(2009),Ahn(2009),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Wilson(2010),Shaikh(2009),Park(2010),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400444MM female "research_filter, clinical_filter" UUMD32389 10 59174427 59364919 190493 Gain 3 0.904294 159 1205 chas 85.43 Gain 100 Gain 100 Gain GainGainGain 139 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.1 - - 0 - 0 - - 264(1|Ahn(2009)) "7234(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Hinds(2005),Pang(2010),Altshuler(2010))" "1397(5|Park(2010),Ju(2010),McCarroll(2008),Matsuzaki(2009))" - 139 - 0 "58235(95|Conrad(2009),Ahn(2009),Perry(2008),Ju(2010),Levy(2007),Altshuler(2010),Durbin(2010),Hinds(2006),Park(2010),Wilson(2010),McCarroll(2008),Pang(2010),Campbell(2011),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 400609FJ male "research_filter, clinical_filter" WWCZ24238 X 3690527 3880686 190160 Loss 0 0.81921 8 27165 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS Xp22.33 - LOC389906 1 LOC389906 1 - - - "159977(12|Conrad(2009),Matsuzaki(2009),Ju(2010))" - 48 1 - 0 "190160(20|Ju(2010),Wilson(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401736BF male - BRIY29802 1 55093212 55283311 190100 Gain 3 0.893942 214 892 chas 76.76 Gain 73.84 Gain 99.98 Gain GainGainGain 157 NA NA NA "ChAS,IPN,NXS,PTK" 1p32.3 - "TTC4,PARS2,HEATR8-TTC4,HEATR8,C1orf177,ACOT11,TTC22" 7 "TTC4,PARS2,HEATR8-TTC4,HEATR8,C1orf177,ACOT11,TTC22" 7 - - - "27075(15|Conrad(2009),Redon(2006),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Kim(2009))" "758(5|Matsuzaki(2009),Mills(2006))" 1 156 - 0 "190100(78|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Itsara(2009),Kim(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Pinto(2011),Forsberg(2012),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" VRMG83827 2 230713969 230903875 189907 Gain 4 0.935077 154 1241 chas 99.08 Gain 100 Gain 99.09 Gain GainGainGain 74 NA NA NA "ChAS,IPN,NXS,PTK" 2q36.3 - "SLC16A14,TRIP12,FBXO36" 3 "SLC16A14,TRIP12,FBXO36" 3 - - - "189907(6|de Smith(2007),Conrad(2009),Pinto(2007),Matsuzaki(2009))" 673(1|Pang(2010)) - 74 - 0 "168859(37|Conrad(2009),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401769CR male "research_filter, clinical_filter" MUIH56067 14 22769983 22959555 189573 Gain 3 0.868511 256 743 chas 0 - 42.86 Gain 100 Gain #NAME? 139 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "189573(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 139 - 0 "189573(125|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400930MK female "research_filter, clinical_filter" XOQW96687 16 15127986 15317320 189335 Gain 3 0.885939 118 1618 chas 13.63 Gain 14.99 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 16p13.11 - "NTAN1,MIR3180-4,PDXDC1,RRN3" 4 "NTAN1,MIR3180-4,PDXDC1,RRN3" 4 - - - "141627(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Itsara(2009),McKernan(2009),Shaikh(2009))" 656(1|Conrad(2009)) 85 45 - 0 "189335(43|Teague(2010),Itsara(2009),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2008),Wong(2007),Pinto(2011),McKernan(2009))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" FYVR80369 3 61027397 61216598 189202 Loss 1 0.928067 384 494 chas 96.41 Loss 97.18 Loss 98.2 Loss LossLossLoss 186 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.2 - FHIT 1 FHIT 1 - - - "155011(5|Pinto(2007),Redon(2006),Perry(2008))" "984(2|Conrad(2009),Perry(2008))" - 186 FHIT#asd_candidate 1 "189202(20|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401448BJ male "research_filter, clinical_filter" ZRXE40373 Y 23707259 23896313 189055 Gain 2 0.927943 126 1512 chas 99.61 Gain 0 - 0 - Gain-- 97 0 - - "ChAS,IPN" Yq11.223 - "RBMY1B,RBMY1A1,TTTY13,RBMY1D" 4 "RBMY1B,RBMY1A1,TTTY13,RBMY1D" 4 - "189055#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "189055(3|Kim(2009),Matsuzaki(2009),Perry(2008))" - 95 97 - 0 "189055(5|Locke(2006),Kim(2009),Redon(2006),Perry(2008),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400730SH male "research_filter, clinical_filter" OULL87238 5 37354525 37543486 188962 Gain 3 0.901781 155 1227 chas 53.19 Gain 83.89 Gain 88.67 Gain GainGainGain 70 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.2 - "WDR70,NUP155" 2 "WDR70,NUP155" 2 - - - 6405(1|Conrad(2009)) - 29 70 - 0 "188962(10|Pinto(2011),Conrad(2009),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" JVBB89605 2 87120889 87309821 188933 Loss 1 0.887446 29 6747 chas 0 - 0 - 0 - --- 19 0 - - ChAS 2p11.2 - "PLGLB1,PLGLB2,LOC285074,RGPD2,RGPD1,LOC100286979" 6 "PLGLB1,PLGLB2,LOC285074,RGPD2,RGPD1,LOC100286979" 6 - - - "188933(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Kidd(2008))" - 99 19 - 0 "188933(53|Conrad(2009),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 400650RM male clinical_filter TZAD89276 9 30554963 30743640 188678 Loss 1 0.916445 124 1533 chas 95.05 Loss 97.51 Loss 97.5 Loss LossLossLoss 122 97.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - "188678(9|Pinto(2007),Shaikh(2009))" 355(1|McKernan(2009)) 2 122 - 0 "188678(15|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401185LE female "research_filter, clinical_filter" IXLI37228 14 22749289 22937856 188568 Loss 1 0.852559 242 782 chas 0 - 0 - 99.89 Loss #NAME? 120 100 Loss "BS,IP6" "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "188568(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 120 - 0 "188568(121|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" TQQL83388 3 143474357 143662394 188038 Loss 1 0.912019 160 1182 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 117 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q24 - SLC9A9 1 SLC9A9 1 SLC9A9 - - 2923(2|McKernan(2009)) 388(2|Bentley(2008)) - 117 SLC9A9#asd_known 1 "34976(15|Kidd(2008),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" AVGX21589 X 114205634 114393470 187837 Gain 3 0.902058 132 1433 chas 63.51 Gain 0 - 0 - Gain-- 129 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq23 - "IL13RA2,LRCH2" 2 "IL13RA2,LRCH2" 2 - - - "187837(2|de Smith(2007),Shaikh(2009))" 139(1|Levy(2007)) - 129 - 0 "187837(9|Levy(2007),Durbin(2010),Kidd(2008),Wilson(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400379BB_1 female "research_filter, clinical_filter" IDTW13637 4 59484598 59672416 187819 Loss 1 0.918847 128 1478 chas 95.33 Loss 97.67 Loss 97.67 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" "4q13.1,4q12" - - 0 - 0 - - - 41119(1|Jakobsson(2008)) 318(1|Mills(2006)) - 114 - 0 "178506(12|Wong(2007),Jakobsson(2008),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" BDAF16773 X 97844714 98032407 187694 Loss 1 0.909776 84 2261 chas 95.93 Loss 0 - 0 - Loss-- 103 100 Loss "BS,GTC,IP6" "ChAS,IPN" Xq21.33 - - 0 - 0 - - - "83819(3|Wang(2007),Shaikh(2009))" 485(1|Matsuzaki(2009)) - 103 - 0 "187694(20|Wang(2007),Durbin(2010),Shaikh(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" FXTM73808 17 21345001 21532485 187485 Gain 4 0.946878 44 4360 chas 100 Gain 100 Gain 100 Gain GainGainGain 88 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - C17orf51 1 C17orf51 1 - - - "187485(21|Wang(2007),Korbel(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "2184(6|Conrad(2009),Perry(2008))" 89 88 - 0 "187485(30|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401030GI female research_filter NGFJ29672 X 89691649 89878515 186867 Loss 1 0.849974 60 3167 chas 0 - 0 - 0 - --- 58 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - 1(1|Levy(2007)) - 100 58 - 0 "175983(6|Teague(2010),Redon(2006),Durbin(2010))" TRUE TRUE ipn_no algo_no NA 400269DA female clinical_filter LHMB79045 14 20511673 20698504 186832 Loss 1 0.912258 360 520 chas 100 Loss 100 Loss 100 Loss LossLossLoss 140 NA NA NA "ChAS,IPN,NXS,PTK" 14q11.2 - "OR4L1,OR4K17,OR11G2,OR11H6,OR4N5" 5 "OR4L1,OR4K17,OR11G2,OR11H6,OR4N5" 5 - - - "186832(30|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Ju(2010),McCarroll(2008),Park(2010),Zogopoulos(2007),Kim(2009),Shaikh(2009),Mills(2006))" "3663(5|Park(2010),Ahn(2009),Matsuzaki(2009),Perry(2008))" 3 140 - 0 "186832(94|Ju(2010),Redon(2006),Conrad(2009),Perry(2008b),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Mills(2006),Wang(2007),Ahn(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401285HN male "research_filter, clinical_filter" OBJF39540 10 51449414 51636197 186784 Gain 3 0.879855 213 881 chas 51 Gain 71.36 Gain 98.61 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.23 - "TIMM23,MSMB,NCOA4,AGAP7" 4 "TIMM23,MSMB,NCOA4,AGAP7" 4 "MSMB,NCOA4" - - "76899(13|Conrad(2009),Matsuzaki(2009),de Smith(2007),McKernan(2009),Bentley(2008),Park(2010))" "2196(7|Conrad(2009),Matsuzaki(2009),Perry(2008))" 54 64 - 0 "186784(74|Teague(2010),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401191MI male "research_filter, clinical_filter" RSYQ67471 14 22566186 22752693 186508 Gain 3 0.869336 373 501 chas 0 - 22.95 Gain 0 - -Gain- 210 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "186508(13|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 687(1|Matsuzaki(2009)) - 210 - 0 "186508(51|Sebat(2004),Wong(2007),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_no 400624RJ male "research_filter, clinical_filter" LFVX88346 1 121152812 121339317 186506 Gain 3 0.889077 142 1322 chas 89.31 Gain 81.26 Gain 90.36 Gain GainGainGain 76 NA NA NA "ChAS,IPN,NXS,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "147193(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 81 76 - 0 "186506(15|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401694SG male "research_filter, clinical_filter" RTCT86718 Y 25403869 25590273 186405 Gain 2 0.847366 132 1422 chas 42.26 Gain 0 - 0 - Gain-- 39 NA NA NA "ChAS,IPN" Yq11.223 - "DAZ3,DAZ2,DAZ4" 3 "DAZ3,DAZ2,DAZ4" 3 - "186405#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "186405(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 38 - 0 "186405(7|McCarroll(2008),Durbin(2010),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" GHAL32977 X 49173886 49360238 186353 Gain 2 0.907006 13 15529 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "186353(20|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 3 - 0 "136354(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401734PG male - BCMG96058 7 62437464 62623531 186068 Gain 3 0.89629 76 2480 chas 49.34 Gain 100 Gain 100 Gain GainGainGain 107 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - - 0 - 0 - - - "186068(17|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pang(2010),Pinto(2007),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" 182(1|Perry(2008)) 49 107 - 0 "186068(54|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Sharp(2005),Iafrate(2004),Durbin(2010),Pang(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400013TA male "research_filter, clinical_filter" WGSV83254 7 62437464 62623531 186068 Gain 3 0.889145 76 2480 chas 49.34 Gain 100 Gain 100 Gain GainGainGain 107 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - - 0 - 0 - - - "186068(17|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pang(2010),Pinto(2007),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" 182(1|Perry(2008)) 49 107 - 0 "186068(54|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Sharp(2005),Iafrate(2004),Durbin(2010),Pang(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" HDQS55514 X 49174229 49360238 186010 Gain 2 0.922146 9 23251 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "186010(20|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "136011(48|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400653GP male - MDAA91863 4 168808128 168994080 185953 Loss 1 0.914545 111 1690 chas 98.91 Loss 99.24 Loss 99.48 Loss LossLossLoss 164 98.86 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "185953(25|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 164 - 0 "185953(123|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" FSQK31243 X 91223891 91409681 185791 Loss 1 0.915264 124 1510 chas 89.83 Loss 0 - 0 - Loss-- 60 92.9 Loss "BS,GTC,IP6" "ChAS,IPN" Xq21.31 - PCDH11X 1 - 0 - - - 2108(3|Matsuzaki(2009)) 1507(4|Matsuzaki(2009)) 100 60 - 0 "185791(11|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400863SS female "research_filter, clinical_filter" VBEF49630 4 168808500 168994080 185581 Loss 1 0.929915 110 1702 chas 99.06 Loss 99.47 Loss 100 Loss LossLossLoss 163 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "185581(25|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 163 - 0 "185581(123|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" AEJP39672 9 25537670 25723237 185568 Loss 1 0.917575 160 1167 chas 94.9 Loss 97.45 Loss 97.45 Loss LossLossLoss 142 NA NA NA "ChAS,IPN,NXS,PTK" "9p21.2,9p21.3" - TUSC1 1 TUSC1 1 - - - "52267(4|Itsara(2009),Conrad(2009),Matsuzaki(2009),Park(2010))" "765(4|Bentley(2008),Matsuzaki(2009),Mills(2006))" - 142 - 0 "160784(37|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401234MB male "research_filter, clinical_filter" HDQN23240 4 168808600 168994080 185481 Loss 1 0.918216 109 1717 chas 99.12 Loss 99.47 Loss 99.47 Loss LossLossLoss 163 99.12 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "185481(25|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 163 - 0 "185481(123|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400136DM female "research_filter, clinical_filter" JITM64437 X 49184676 49370133 185458 Gain 3 0.948193 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400661AD male - GUWW37548 X 49184676 49370133 185458 Gain 2 0.93895 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401195PN male - HEAQ37888 X 49184676 49370133 185458 Gain 4 0.939499 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400956AM male - PYHX78792 X 49184676 49370133 185458 Gain 3 0.904062 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401799DP male - JSXF59945 X 49184676 49370133 185458 Gain 4 0.87764 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401863BD_1 female - HBQS50118 X 49184676 49370133 185458 Gain 2 0.885417 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400205SP_1 male - QGND60775 X 49184676 49370133 185458 Loss 1 0.87105 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401085LA_1 female - HXGR62358 X 49184676 49370133 185458 Gain 3 0.897513 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400156WT_1 male - PEZC72297 X 49184676 49370133 185458 Gain 3 0.861473 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400298ME male - PTWY73614 X 49184676 49370133 185458 Gain 3 0.939347 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401540GM male - WUVU37744 X 49184676 49370133 185458 Gain 3 0.92876 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401763SG male - IZON54653 X 49184676 49370133 185458 Gain 2 0.941067 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400572PJ male - KZTP77176 X 49184676 49370133 185458 Gain 2 0.911782 8 26494 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401491BB male - XUMQ23395 X 49184676 49370133 185458 Gain 3 0.927431 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401875FG male - LHPN45961 X 49184676 49370133 185458 Gain 3 0.935775 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400603CJ male - BYSK29073 X 49184676 49370133 185458 Gain 3 0.951688 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400620MT male - CYTX87896 X 49184676 49370133 185458 Gain 3 0.922515 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400967PK male - BKFI83925 X 49184676 49370133 185458 Gain 2 0.939719 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401990PR male - ZCOM63077 X 49184676 49370133 185458 Gain 3 0.949391 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401936BA male - YITU99076 X 49184676 49370133 185458 Gain 3 0.92612 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401362ME male - AVAH45014 X 49184676 49370133 185458 Gain 3 0.908106 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401401BA male - GTDY31038 X 49184676 49370133 185458 Gain 3 0.921177 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401860TJ male - FSGH36026 X 49184676 49370133 185458 Gain 2 0.928235 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401254AE male - VPFM57168 X 49184676 49370133 185458 Gain 3 0.95557 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401696CG male - XREB60973 X 49184676 49370133 185458 Gain 3 0.942152 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401084TD male - UAVX81306 X 49184676 49370133 185458 Gain 3 0.951855 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400643LD male - YKSB12189 X 49184676 49370133 185458 Gain 3 0.946546 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401390DG male - QSVT75164 X 49184676 49370133 185458 Gain 3 0.94064 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401791FG male - BCMG96058 X 49184676 49370133 185458 Gain 2 0.942311 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400013TA male - MFZY15027 X 49184676 49370133 185458 Gain 4 0.952465 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401739BJ male - KJKF45195 X 49184676 49370133 185458 Gain 3 0.935375 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401132CH male - KAAS48951 X 49184676 49370133 185458 Gain 3 0.941653 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401504RJ male - QYCK62831 X 49184676 49370133 185458 Gain 3 0.936222 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401556KR male - LUVG84905 X 49184676 49370133 185458 Gain 2 0.934132 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401664SD male - FSRW48279 X 49184676 49370133 185458 Gain 2 0.93308 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401385BB male - OZXZ40778 X 49184676 49370133 185458 Gain 2 0.905988 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400123WN male - TDCE32526 X 49184676 49370133 185458 Gain 2 0.918274 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400583HS male - QMEK60192 X 49184676 49370133 185458 Gain 2 0.938054 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401711WS male - BWCN37814 X 49184676 49370133 185458 Gain 2 0.916315 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401966SR male - NKNM36178 X 49184676 49370133 185458 Gain 2 0.922227 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400668TD male - LCVR91256 X 49184676 49370133 185458 Gain 2 0.898239 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401510DG male - JTMA20495 X 49184676 49370133 185458 Gain 2 0.944287 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 402042BJ male - DHFF12670 X 49184676 49370133 185458 Gain 3 0.88869 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401252AE male - YOPA81411 X 49184676 49370133 185458 Gain 3 0.890333 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 402056KD male - TRVK84587 X 49184676 49370133 185458 Gain 3 0.935147 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401288LD male - QRSF74396 X 49184676 49370133 185458 Gain 3 0.919046 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401500OM male - UDNO19569 X 49184676 49370133 185458 Gain 2 0.891976 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401766MR male - AGBJ55549 X 49184676 49370133 185458 Gain 2 0.869247 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 402016HZ male - WYNE83745 X 49184676 49370133 185458 Gain 3 0.893551 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401844ZD male - AVJL63299 X 49184676 49370133 185458 Gain 3 0.900515 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400206SC male - RFXX95002 X 49184676 49370133 185458 Gain 3 0.922286 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401773AM male - YKER13969 X 49184676 49370133 185458 Gain 2 0.912539 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401372RR male - XCWR96625 X 49184676 49370133 185458 Gain 2 0.928709 8 26494 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 "GAGE8,GAGE12C,GAGE12E,GAGE1,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE12I,GAGE12J,GAGE2B,GAGE6,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 21 - - - "185458(16|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 73 2 - 0 "135459(42|Conrad(2009),Campbell(2011),Kidd(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400158FB male - CRTB70467 4 3903823 4089256 185434 Loss 1 0.869911 74 2540 chas 32.76 Loss 67.97 Loss 100 Loss LossLossLoss 60 0 - - "ChAS,IPN,NXS,PTK" 4p16.3 - FAM86EP 1 FAM86EP 1 - - 185434(1|Giglio(2002)) "185434(7|Pang(2010),Matsuzaki(2009),Shaikh(2009))" "600(6|Levy(2007),Bentley(2008))" 100 60 - 0 "185434(22|Teague(2010),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400577MK female "research_filter, clinical_filter" UMLY49839 9 249920 435130 185211 Gain 3 0.897517 504 368 chas 90.9 Gain 98.3 Gain 98.36 Gain GainGainGain 234 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.3 - DOCK8 1 DOCK8 1 DOCK8 - - "185211(29|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "2099(4|Matsuzaki(2009),Bentley(2008))" 1 234 - 0 "185211(51|Ju(2010),Redon(2006),Conrad(2009),Iafrate(2004),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" AXWL27269 14 22774695 22959540 184846 Loss 1 0.85084 235 789 chas 0 - 0 - 57.59 Loss #NAME? 128 NA NA NA "ChAS,PTK" 14q11.2 - - 0 - 0 - - 767(1|Ahn(2009)) "184846(24|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1581(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 128 - 0 "184846(125|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401962BK female "research_filter, clinical_filter" AVJL63299 11 81836891 82021618 184728 Loss 1 0.913636 152 1223 chas 99.99 Loss 99.62 Loss 100 Loss LossLossLoss 132 NA NA NA "ChAS,IPN,NXS,PTK" 11q14.1 - - 0 - 0 - - - "33688(7|Conrad(2009),Matsuzaki(2009),Levy(2007),McKernan(2009),Kidd(2008),Park(2010))" 439(1|Park(2010)) - 132 - 0 "177297(29|Conrad(2009),Kidd(2010b),McKernan(2009),Durbin(2010),Kidd(2008),Campbell(2011),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" RWTQ90156 8 137677896 137862435 184540 Loss 1 0.927555 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" TUWR15724 8 137677896 137862435 184540 Loss 1 0.925293 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401207DA male "research_filter, clinical_filter" EXZC47846 8 137677896 137862435 184540 Loss 1 0.926071 120 1550 chas 97.49 Loss 96.01 Loss 96.01 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400468OB female "research_filter, clinical_filter" WVDE74465 8 137677896 137862435 184540 Loss 1 0.907973 120 1550 chas 97.49 Loss 96.01 Loss 97.48 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401838EN male "research_filter, clinical_filter" LAYE10086 8 137677896 137862435 184540 Loss 1 0.925183 120 1550 chas 97.49 Loss 96.01 Loss 96.01 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" CCNM95095 8 137677896 137862435 184540 Loss 1 0.920122 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401881TJ male "research_filter, clinical_filter" UCFR59681 8 137677896 137862435 184540 Loss 1 0.904724 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400319HT male "research_filter, clinical_filter" AIRH51991 8 137677896 137862435 184540 Loss 1 0.926701 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400236DB_1 male "research_filter, clinical_filter" RKMW41925 8 137677896 137862435 184540 Loss 1 0.935106 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400323AA female "research_filter, clinical_filter" GQSZ37539 8 137677896 137862435 184540 Loss 1 0.922435 120 1550 chas 97.49 Loss 96.98 Loss 97.48 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" GWRR97762 8 137677896 137862435 184540 Loss 1 0.934414 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" WUVU37744 8 137677896 137862435 184540 Loss 1 0.923027 120 1550 chas 97.49 Loss 93.93 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" VHVH83554 8 137677896 137862435 184540 Loss 1 0.914614 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" YMTT86375 8 137677896 137862435 184540 Loss 1 0.921793 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400797ST male "research_filter, clinical_filter" IGQR94047 8 137677896 137862435 184540 Loss 1 0.918218 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400060MC female "research_filter, clinical_filter" GPMX61747 8 137677896 137862435 184540 Loss 1 0.924733 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 97.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" UAYA68179 8 137677896 137862435 184540 Loss 1 0.910695 120 1550 chas 97.49 Loss 98.25 Loss 98.25 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401729AC female "research_filter, clinical_filter" QIUJ19845 8 137677896 137862435 184540 Loss 1 0.915199 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401853WR male "research_filter, clinical_filter" QJEX76408 8 137677896 137862435 184540 Loss 1 0.923412 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400413FJ female "research_filter, clinical_filter" BOFG10595 8 137677896 137862435 184540 Loss 1 0.916629 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400230TB male "research_filter, clinical_filter" EIKI77114 8 137677896 137862435 184540 Loss 1 0.912884 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" WHOU87472 8 137677896 137862435 184540 Loss 1 0.913167 120 1550 chas 97.49 Loss 96.98 Loss 97.48 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" VAON88685 8 137677896 137862435 184540 Loss 1 0.906326 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" NSQR79941 8 137677896 137862435 184540 Loss 1 0.920324 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401077VC female "research_filter, clinical_filter" QBLX62038 8 137677896 137862435 184540 Loss 1 0.918321 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401681MS female "research_filter, clinical_filter" MNUZ55770 8 137677896 137862435 184540 Loss 1 0.91045 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400292LP female "research_filter, clinical_filter" NBLH72263 8 137677896 137862435 184540 Loss 1 0.90994 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401532LJ female "research_filter, clinical_filter" ZNRO68615 8 137677896 137862435 184540 Loss 1 0.925972 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401862AN male "research_filter, clinical_filter" OWWR99794 8 137677896 137862435 184540 Loss 1 0.920672 120 1550 chas 97.49 Loss 98.25 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" RPWI18802 8 137677896 137862435 184540 Loss 1 0.926354 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" YDLH53232 8 137677896 137862435 184540 Loss 1 0.9095 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401691HA male "research_filter, clinical_filter" TDCE32526 8 137677896 137862435 184540 Loss 1 0.929215 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400583HS male "research_filter, clinical_filter" CHNV74218 8 137677896 137862435 184540 Loss 1 0.921512 120 1550 chas 97.49 Loss 98.75 Loss 100 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400837HN female "research_filter, clinical_filter" JWHR52164 8 137677896 137862435 184540 Loss 1 0.917123 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400984LD female "research_filter, clinical_filter" ROFY65487 8 137677896 137862435 184540 Loss 1 0.922804 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400683EC female "research_filter, clinical_filter" UCQK65306 8 137677896 137862435 184540 Loss 1 0.926896 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" TUOI10912 8 137677896 137862435 184540 Loss 1 0.931458 120 1550 chas 97.49 Loss 98.75 Loss 98.75 Loss LossLossLoss 180 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "184540(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 180 - 0 "184540(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" RPJZ72910 2 52378299 52562733 184435 Loss 1 0.916894 120 1549 chas 97.14 Loss 98.57 Loss 98.57 Loss LossLossLoss 118 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - 1497(1|McKernan(2009)) - - 118 - 0 "60085(7|McKernan(2009),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401395OP male "research_filter, clinical_filter" YDLH53232 22 25726662 25910555 183894 Gain 3 0.889585 67 2786 chas 99.95 Gain 96.12 Gain 100 Gain GainGainGain 239 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,CRYBB2P1" 2 "LRP5L,CRYBB2P1" 2 - - - "183894(64|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "621(2|Conrad(2005),Bentley(2008))" 63 239 - 0 "183894(218|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401691HA male "research_filter, clinical_filter" UYAI76550 6 118723497 118907381 183885 Gain 3 0.90235 180 1027 chas 100 Gain 100 Gain 100 Gain GainGainGain 105 86.42 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q22.31 - "C6orf204,PLN,BRD7P3" 3 "C6orf204,PLN,BRD7P3" 3 PLN - - 1593(1|McKernan(2009)) - 1 105 PLN#asd_candidate 1 "161140(9|Banerjee(2011),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" JFDL89779 1 144279310 144462929 183620 Gain 3 0.882651 32 5923 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.1 50001(1|clone) "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "183620(11|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" "1065(11|Matsuzaki(2009),Perry(2008))" 73 1 - 0 "183620(74|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401526WB male - PXVB29564 2 87126323 87309821 183499 Loss 1 0.870565 28 6796 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 2p11.2 - "RGPD2,PLGLB1,RGPD1,PLGLB2,LOC285074" 5 "RGPD2,PLGLB1,RGPD1,PLGLB2,LOC285074" 5 - - - "183499(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Kidd(2008))" - 99 15 - 0 "183499(52|Conrad(2009),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400818BL female clinical_filter LMDJ78561 2 87126323 87309821 183499 Loss 1 0.873324 28 6796 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 2p11.2 - "RGPD2,PLGLB1,RGPD1,PLGLB2,LOC285074" 5 "RGPD2,PLGLB1,RGPD1,PLGLB2,LOC285074" 5 - - - "183499(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Kidd(2008))" - 99 15 - 0 "183499(52|Conrad(2009),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401518VK female clinical_filter APGE11753 9 17092188 17275608 183421 Loss 1 0.926018 150 1231 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 112 NA NA NA "ChAS,IPN,NXS,PTK" 9p22.2 - CNTLN 1 CNTLN 1 - - - "183421(3|Conrad(2009),McKernan(2009),Shaikh(2009))" 965(1|McKernan(2009)) - 111 - 0 "132955(15|Conrad(2009),Jakobsson(2008),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" UAZI16039 14 22761289 22944507 183219 Gain 3 0.867426 256 718 chas 0 - 10.72 Gain 0 - -Gain- 129 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "183219(23|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 129 - 0 "183219(123|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400625FT male "research_filter, clinical_filter" DCUN59806 14 106044263 106227154 182892 Gain 3 0.910534 29 6531 chas 0 - 66.42 Gain 71.83 Gain #NAME? 34 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - "44298(3|Kidd(2008),Ahn(2009))" "182892(77|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4900(18|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 34 - 0 "182892(410|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400316SL female research_filter KWJN47187 10 46966534 47149411 182878 Gain 3 0.885597 232 791 chas 99.99 Gain 0 - 100 Gain Gain-Gain 170 79.68 Gain "BS,GTC" "ChAS,IPN,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" OPKR54750 10 46966534 47149411 182878 Gain 3 0.888637 232 791 chas 99.99 Gain 95.32 Gain 100 Gain GainGainGain 170 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401822TL female "research_filter, clinical_filter" GNMX63810 10 46966534 47149411 182878 Loss 1 0.931614 232 791 chas 49 Loss 99.96 Loss 100 Loss LossLossLoss 170 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" RVIS81666 10 46966534 47149411 182878 Gain 3 0.905346 232 791 chas 0 - 97.06 Gain 100 Gain #NAME? 170 67.95 - BS "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 401852SK male "research_filter, clinical_filter" NZSQ74406 10 46966534 47149411 182878 Loss 1 0.86117 232 791 chas 0 - 3.98 Loss 0 - -Loss- 170 53.02 Loss GTC "ChAS,NXS" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" MECH38806 10 46966534 47149411 182878 Gain 3 0.906321 232 791 chas 0 - 100 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400671PP male "research_filter, clinical_filter" EFHU67365 10 46966534 47149411 182878 Gain 3 0.882798 232 791 chas 0 - 93.11 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401333MM male "research_filter, clinical_filter" XBDZ94110 10 46966534 47149411 182878 Gain 3 0.883804 232 791 chas 0 - 72.09 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400649PS male "research_filter, clinical_filter" GBOO31083 10 46966534 47149411 182878 Gain 3 0.888549 232 791 chas 0 - 98.77 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400282RA female "research_filter, clinical_filter" ASYD11505 10 46966534 47149411 182878 Gain 3 0.885665 232 791 chas 0 - 80.37 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402024BB male "research_filter, clinical_filter" IDVO19613 10 46966534 47149411 182878 Gain 3 0.878067 232 791 chas 0 - 44.82 Gain 0 - -Gain- 170 NA NA NA "ChAS,NXS" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401434VN female "research_filter, clinical_filter" RPWI18802 10 46966534 47149411 182878 Gain 3 0.883998 232 791 chas 0 - 100 Gain 100 Gain #NAME? 170 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401580CA male "research_filter, clinical_filter" EIKI77114 10 46966534 47149411 182878 Loss 1 0.854182 232 791 chas 0 - 0 - 0 - --- 170 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "182878(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 170 - 0 "182878(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401221LD female clinical_filter PRPG47770 14 106667035 106849677 182643 Gain 3 0.892778 63 2945 chas 60.39 Gain 69.48 Gain 69.48 Gain GainGainGain 85 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "182643(82|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 47 85 - 0 "182643(467|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401695BT female "research_filter, clinical_filter" KWBM98824 17 21328368 21510992 182625 Loss 1 0.908206 50 3727 chas 96.66 Loss 87.66 Loss 99.3 Loss LossLossLoss 89 NA NA NA "ChAS,IPN,NXS,PTK" 17p11.2 - C17orf51 1 C17orf51 1 - - - "182625(19|Wang(2007),Korbel(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "2315(7|Conrad(2009),Perry(2008),Bentley(2008))" 89 89 - 0 "182625(39|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" CHNV74218 10 17859430 18042017 182588 Loss 1 0.870692 27 7022 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 73 11 - 0 "151783(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400837HN female clinical_filter OBWN97941 11 48709715 48892181 182467 Loss 1 0.873603 44 4243 chas 0 - 0 - 0 - --- 53 0 - - ChAS "11p11.12,11p11.2" - - 0 - 0 - - - "182467(19|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009),McCarroll(2008))" "638(4|Levy(2007),McKernan(2009))" - 53 - 0 "182467(306|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),Wilson(2010),Pinto(2007),Cooper(2008),Pinto(2011),Redon(2006),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no affy6_no 400113LD female clinical_filter AGIM53957 21 21266216 21448325 182110 Loss 1 0.920055 104 1768 chas 98.85 Loss 99.42 Loss 99.42 Loss LossLossLoss 116 98.89 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q21.1 - - 0 - 0 - - - "182110(5|McKernan(2009),Pinto(2007),Matsuzaki(2009),Shaikh(2009))" - - 116 - 0 "139741(11|McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400564SN female "research_filter, clinical_filter" ICCB48361 7 62437464 62619266 181803 Gain 3 0.888817 72 2560 chas 88.45 Gain 89.17 Gain 100 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - - 0 - 0 - - - "181803(17|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pang(2010),Pinto(2007),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" 182(1|Perry(2008)) 50 103 - 0 "181803(52|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Sharp(2005),Iafrate(2004),Durbin(2010),Pang(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401258PC female "research_filter, clinical_filter" AQKH94698 10 48117190 48298893 181704 Loss 1 0.871198 16 12113 chas 0 - 0 - 0 - --- 2 0 - - ChAS 10q11.22 - "ANXA8,LOC642826,CTSL1P2,ANXA8L1,FAM25B,FAM25C,AGAP9,FAM25G" 8 "ANXA8,LOC642826,CTSL1P2,ANXA8L1,FAM25B,FAM25C,AGAP9,FAM25G" 8 - - - "181704(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 2 - 0 "181704(63|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400955BE male - NSQR79941 10 48117190 48298893 181704 Loss 1 0.891412 16 12113 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 10q11.22 - "ANXA8,LOC642826,CTSL1P2,ANXA8L1,FAM25B,FAM25C,AGAP9,FAM25G" 8 "ANXA8,LOC642826,CTSL1P2,ANXA8L1,FAM25B,FAM25C,AGAP9,FAM25G" 8 - - - "181704(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 2 - 0 "181704(63|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401077VC female - JTJC66263 1 145622531 145803834 181304 Gain 3 0.89093 146 1250 chas 67.62 Gain 98.13 Gain 100 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.1 - "CD160,RNF115,GPR89A,PDZK1" 4 "CD160,RNF115,GPR89A,PDZK1" 4 - "181304#1%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871" - "181304(10|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009))" - 33 61 GPR89A#asd_candidate 1 "181304(26|Wang(2007),Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Perry(2008b),Locke(2006),Jakobsson(2008),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" FRXS36515 1 55102448 55283311 180864 Gain 3 0.892076 201 904 chas 80.68 Gain 89.97 Gain 100 Gain GainGainGain 152 NA NA NA "ChAS,IPN,NXS,PTK" 1p32.3 - "TTC4,PARS2,HEATR8-TTC4,HEATR8,C1orf177,TTC22" 6 "TTC4,PARS2,HEATR8-TTC4,HEATR8,C1orf177,TTC22" 6 - - - "17839(4|de Smith(2007),Kim(2009),Redon(2006),Park(2010))" 1(1|Mills(2006)) 1 151 - 0 "180864(15|Wong(2007),Redon(2006),Pinto(2011),Itsara(2009),Kim(2009),Durbin(2010),Kidd(2008),Park(2010),Forsberg(2012),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400769SL female "research_filter, clinical_filter" XZOF13341 21 35726226 35906868 180643 Gain 3 0.895252 324 559 chas 100 Gain 99.53 Gain 99.7 Gain GainGainGain 106 NA NA NA "ChAS,IPN,NXS,PTK" "21q22.11,21q22.12" - "KCNE2,RCAN1,KCNE1,FAM165B" 4 "KCNE2,RCAN1,KCNE1,FAM165B" 4 "KCNE2,KCNE1" - - "180643(2|Shaikh(2009),Zogopoulos(2007))" "923(2|Levy(2007),McKernan(2009))" - 106 - 0 "180643(11|Teague(2010),McKernan(2009),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" UEDI98118 14 106525299 106705896 180598 Gain 3 0.903965 24 7852 chas 16.89 Gain 0 - 0 - Gain-- 81 NA NA NA "ChAS,IPN" 14q32.33 - - 0 - 0 - - - "180598(52|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 57 81 - 0 "180598(422|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400131CM female research_filter XIWN71249 10 46969032 47149411 180380 Gain 3 0.878494 228 794 chas 0 - 42.1 Gain 100 Gain #NAME? 169 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "180380(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 169 - 0 "180380(263|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401935TM female "research_filter, clinical_filter" UMLY49839 14 22761289 22941375 180087 Loss 1 0.851592 248 729 chas 0 - 0 - 0 - --- 117 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "180087(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 117 - 0 "180087(118|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401419SW male clinical_filter YRQD30893 8 137682510 137862435 179926 Loss 1 0.907556 119 1524 chas 99.99 Loss 96.12 Loss 98.47 Loss LossLossLoss 177 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.23 - - 0 - 0 - - - "179926(22|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "463(5|Wang(2008),Pang(2010),Levy(2007),Wheeler(2008),Mills(2006))" - 177 - 0 "179926(112|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Pang(2010),Pinto(2007),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401022ML female "research_filter, clinical_filter" KZTP77176 14 22752095 22931832 179738 Gain 3 0.868332 220 820 chas 0 - 0 - 0 - --- 113 0 - - ChAS 14q11.2 - - 0 - 0 - - - "179738(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 113 - 0 "179738(121|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 401491BB male clinical_filter PAGW82790 14 106044263 106223587 179325 Loss 1 0.872484 28 6641 chas 0 - 19.77 Loss 0 - -Loss- 30 0 - - "ChAS,NXS" 14q32.33 - - 0 - 0 - - "40731(3|Kidd(2008),Ahn(2009))" "179325(77|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4900(18|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 30 - 0 "179325(405|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400245SJ female "research_filter, clinical_filter" FDGT59945 14 106044263 106223587 179325 Loss 1 0.89408 28 6641 chas 0 - 57.99 Loss 47.14 Loss #NAME? 30 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - "40731(3|Kidd(2008),Ahn(2009))" "179325(77|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4900(18|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 30 - 0 "179325(405|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401475MK male "research_filter, clinical_filter" FSGH36026 11 107019544 107198839 179296 Gain 3 0.900227 132 1368 chas 99.4 Gain 99.46 Gain 99.62 Gain GainGainGain 115 NA NA NA "ChAS,IPN,NXS,PTK" 11q22.3 - CWF19L2 1 CWF19L2 1 - - 14326(1|Korbel(2007)) - 847(1|Conrad(2009)) 1 115 - 0 "179296(14|Conrad(2009),Wong(2007),Durbin(2010),Bentley(2008),Korbel(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" DWHI65488 17 69973920 70153211 179292 Gain 3 0.902286 280 642 chas 98.35 Gain 100 Gain 100 Gain GainGainGain 140 NA NA NA "ChAS,IPN,NXS,PTK" 17q24.3 - SOX9 1 SOX9 1 SOX9 - - "32284(3|McKernan(2009),Matsuzaki(2009))" "1197(2|Park(2010),Conrad(2009))" - 140 - 0 "124131(11|Park(2010),Conrad(2009),McKernan(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400135DR male "research_filter, clinical_filter" UBGH15538 10 38721570 38900673 179104 Loss 1 0.94029 10 19900 chas 84.02 Loss 0 - 0 - Loss-- 7 NA NA NA "ChAS,IPN" 10p11.1 50001(1|clone) LOC399744 1 LOC399744 1 - - - "179104(19|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009),Pang(2010))" "1779(3|Levy(2007),Ahn(2009))" 36 7 - 0 "179104(55|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Perry(2008b),Pinto(2011),Teague(2010))" FALSE TRUE ipn_yes algo_yes NA 401266HM female research_filter TOAX48712 15 84915079 85094142 179064 Gain 3 0.87708 52 3511 chas 4.45 Gain 0 - 0 - Gain-- 36 0 - - "ChAS,IPN" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "179064(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 36 - 0 "179064(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400758KP female "research_filter, clinical_filter" JHGL98054 15 84915079 85094142 179064 Gain 3 0.874496 52 3511 chas 4.45 Gain 5.64 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "179064(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 36 - 0 "179064(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" QXHS37749 15 84915079 85094142 179064 Gain 3 0.884747 52 3511 chas 26.48 Gain 55.07 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "179064(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 36 - 0 "179064(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401943KA male "research_filter, clinical_filter" PCSL59179 15 84915079 85094142 179064 Gain 3 0.880823 52 3511 chas 18.76 Gain 12.45 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "179064(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 36 - 0 "179064(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401879HJ male "research_filter, clinical_filter" QRSF74396 15 84915079 85094142 179064 Gain 3 0.882652 52 3511 chas 18.76 Gain 45.31 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "179064(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 36 - 0 "179064(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401500OM male "research_filter, clinical_filter" GVAB34760 14 106044679 106223587 178909 Loss 1 0.893702 26 7156 chas 0 - 34.68 Loss 67.9 Loss #NAME? 29 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - "40731(3|Kidd(2008),Ahn(2009))" "178909(77|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4900(18|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 29 - 0 "178909(405|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400453LN male "research_filter, clinical_filter" LHPN45961 1 235533690 235712522 178833 Gain 3 0.902942 320 560 chas 86.05 Gain 93.62 Gain 98.49 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 1q42.3 - "GNG4,TBCE,B3GALNT2" 3 "GNG4,TBCE,B3GALNT2" 3 TBCE - - "178833(6|Conrad(2009),McKernan(2009),Pang(2010),Kidd(2008),Kim(2009),Shaikh(2009))" - 2 103 - 0 "178833(17|Pang(2010),Kidd(2010),Conrad(2009),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Hinds(2006),Kidd(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" NHGO29651 X 126540626 126719357 178732 Loss 1 0.91683 93 1942 chas 92.53 Loss 0 - 0 - Loss-- 107 95.37 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - "30210(10|Ju(2010),Korbel(2007),Matsuzaki(2009),Conrad(2009),Pang(2010),Kidd(2008),Park(2010))" 1(1|Levy(2007)) - 107 - 0 "147172(37|Conrad(2009),Korbel(2007),Ju(2010),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Campbell(2011),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400524NJ female "research_filter, clinical_filter" EDVH13355 4 168808500 168987086 178587 Loss 1 0.909525 107 1684 chas 99.99 Loss 99.97 Loss 99.97 Loss LossLossLoss 155 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "178587(25|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 155 - 0 "178587(123|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401347DH male "research_filter, clinical_filter" YQRA83123 5 175460088 175638617 178530 Loss 1 0.922903 48 3798 chas 90.37 Loss 39.82 Loss 88.49 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.2 - "FAM153B,LOC100507387,LOC643201" 3 "FAM153B,LOC100507387,LOC643201" 3 - "178530#1%""Sotos syndrome"":2326144" - "178530(29|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" 230(1|Wang(2008)) 73 70 - 0 "178530(106|Conrad(2009),Wong(2007),Pinto(2007),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Redon(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400416KA male "research_filter, clinical_filter" OWBB95825 15 84915079 85093439 178361 Gain 3 0.882315 48 3794 chas 4.55 Gain 0 - 0 - Gain-- 35 0 - - "ChAS,IPN" 15q25.2 50001(1|contig) "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 "GOLGA6L5,DNM1P41,UBE2Q2P1" 3 - - "41982(2|Kidd(2008),Tuzun(2005))" "178361(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" 1(1|Levy(2007)) 72 35 - 0 "178361(55|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Tuzun(2005),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 401275SJ male research_filter JYQV48819 11 50417448 50595389 177942 Gain 3 0.896022 48 3786 chas 66.12 Gain 99.96 Gain 0 - GainGain- 34 99.94 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 11p11.12 - - 0 - 0 - - - "177942(9|Itsara(2009),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009))" - - 34 - 0 "177942(36|Conrad(2009),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400449PK female research_filter XMAJ27378 7 118853849 119031778 177930 Loss 1 0.909765 105 1710 chas 100 Loss 97.17 Loss 100 Loss LossLossLoss 84 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q31.31 - - 0 - 0 - - - "49104(3|Itsara(2009),Pang(2010),Shaikh(2009))" - - 83 - 0 "177930(17|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401100SJ female "research_filter, clinical_filter" MLUO94199 10 17859430 18037328 177899 Loss 1 0.885501 25 7412 chas 0 - 0 - 50.82 Loss #NAME? 11 0 - - "ChAS,PTK" 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "147094(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400508RD male "research_filter, clinical_filter" UWAE35667 1 145626119 145803834 177716 Gain 3 0.897554 140 1278 chas 75.7 Gain 96.49 Gain 98.8 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.1 - "CD160,RNF115,GPR89A,PDZK1" 4 "CD160,RNF115,GPR89A,PDZK1" 4 - "177716#1%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871" - "177716(10|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009))" - 31 59 GPR89A#asd_candidate 1 "177716(26|Wang(2007),Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Perry(2008b),Locke(2006),Jakobsson(2008),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" PEOV46099 4 168808128 168985834 177707 Loss 1 0.921977 107 1676 chas 99.73 Loss 99.76 Loss 99.76 Loss LossLossLoss 154 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.3 - - 0 - 0 - - - "177707(25|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" - - 154 - 0 "177707(123|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Kim(2009),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401110GJ female "research_filter, clinical_filter" TASV63603 9 28588575 28766228 177654 Loss 1 0.933163 166 1076 chas 97.47 Loss 98.76 Loss 98.75 Loss LossLossLoss 137 97.48 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "177654(16|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 137 - 0 "177654(27|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" PRED73338 9 28588575 28766228 177654 Loss 1 0.932229 166 1076 chas 94.93 Loss 97.64 Loss 98.75 Loss LossLossLoss 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "177654(16|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 137 - 0 "177654(27|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" GDLU88739 9 28588575 28766228 177654 Loss 1 0.910645 166 1076 chas 94.93 Loss 95.09 Loss 97.64 Loss LossLossLoss 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "177654(16|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 137 - 0 "177654(27|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" LUVG84905 9 28588575 28766228 177654 Loss 1 0.9002 166 1076 chas 97.47 Loss 90.45 Loss 98.75 Loss LossLossLoss 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "177654(16|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 137 - 0 "177654(27|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401664SD male "research_filter, clinical_filter" TBRP43796 4 69366693 69544335 177643 Gain 3 0.894336 64 2819 chas 66.9 Gain 63.8 Gain 0 - GainGain- 78 67.15 Gain IP6 "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "177643(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 65 78 - 0 "177643(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401894PD male "research_filter, clinical_filter" NXEA90195 Y 22311731 22489344 177614 Loss 0 0.879125 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 401133JG male research_filter EEVS84165 Y 22311731 22489344 177614 Loss 0 0.845095 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 401039PA male research_filter WQLL63278 Y 22311731 22489344 177614 Loss 0 0.914507 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400503HD male research_filter GTRU40344 Y 22311731 22489344 177614 Loss 0 0.909894 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400134WK_1 male research_filter ZVRQ32621 Y 22311731 22489344 177614 Loss 0 0.883938 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 401176BD male research_filter LDEW86321 Y 22311731 22489344 177614 Loss 0 0.864179 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 401786WD male research_filter MUBF17546 Y 22311731 22489344 177614 Loss 0 0.954963 12 16146 chas 24.79 Loss 0 - 0 - Loss-- 8 NA NA NA "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes NA 400540BM male research_filter DLXG88049 Y 22311731 22489344 177614 Loss 0 0.879602 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 NA NA NA "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes NA 400927BD male research_filter ERUW26412 Y 22311731 22489344 177614 Loss 0 0.916842 12 16146 chas 24.8 Loss 0 - 0 - Loss-- 8 NA NA NA "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes NA 401308LD male research_filter NZSQ74406 Y 22311731 22489344 177614 Loss 0 0.880358 12 16146 chas 0 - 0 - 0 - --- 8 0 - - ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no affy6_no 400191MP_1 male - TASV63603 Y 22311731 22489344 177614 Loss 0 0.876405 12 16146 chas 0 - 0 - 0 - --- 8 0 - - ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no affy6_no 400255CD male - YMTT86375 Y 22311731 22489344 177614 Loss 0 0.864059 12 16146 chas 0 - 0 - 0 - --- 8 0 - - ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no affy6_no 400797ST male - GFOF72186 Y 22311731 22489344 177614 Loss 0 0.933961 12 16146 chas 0 - 0 - 0 - --- 8 0 - - ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no affy6_no 401942MP male - KMMD77027 Y 22311731 22489344 177614 Loss 0 0.963133 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 400783MJ male - LVBF79370 Y 22311731 22489344 177614 Loss 0 0.896405 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401287CF male - LFVX88346 Y 22311731 22489344 177614 Loss 0 0.942835 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401694SG male - ZNRO68615 Y 22311731 22489344 177614 Loss 0 0.925716 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401862AN male - LUVG84905 Y 22311731 22489344 177614 Loss 0 0.915852 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401664SD male - DEXW71048 Y 22311731 22489344 177614 Loss 0 0.88741 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 400833BB male - LOAP92341 Y 22311731 22489344 177614 Loss 0 0.960847 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401554VN male - JTMA20495 Y 22311731 22489344 177614 Loss 0 0.906402 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 402042BJ male - RFXX95002 Y 22311731 22489344 177614 Loss 0 0.858593 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401773AM male - JPEZ22320 Y 22311731 22489344 177614 Loss 0 0.892999 12 16146 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Yq11.223 50001(1|clone) - 0 - 0 - "177614#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "177614(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "177614(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no NA 401149VA male - ZRRL85494 X 52923472 53101067 177596 Gain 3 0.903119 106 1691 chas 80.21 Gain 0 - 0 - Gain-- 60 NA NA NA "ChAS,IPN" Xp11.22 - "GPR173,FAM156B,FAM156A" 3 "GPR173,FAM156B,FAM156A" 3 - - 101999(1|Kidd(2008)) "177596(3|Conrad(2009),Korbel(2007),Matsuzaki(2009))" 187(2|Levy(2007)) 40 60 - 0 "177596(12|Teague(2010),Korbel(2007),Conrad(2009),Kidd(2008),Levy(2007),Durbin(2010),Kidd(2010b))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" YSLM40888 10 17859430 18036656 177227 Loss 1 0.888395 24 7705 chas 0 - 0 - 52.78 Loss #NAME? 11 0 - - "ChAS,PTK" 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400460DM female research_filter USNP20353 10 17859430 18036656 177227 Loss 1 0.872183 24 7705 chas 0 - 0 - 0 - --- 11 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400082SD female - ROAF64821 10 17859430 18036656 177227 Loss 1 0.893348 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401870FB male - WHOU87472 10 17859430 18036656 177227 Loss 1 0.864768 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401380OL male - FMEA92817 10 17859430 18036656 177227 Loss 1 0.872784 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401175FA female - RXUT32164 10 17859430 18036656 177227 Loss 1 0.872113 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401813DN female - IOGU88526 10 17859430 18036656 177227 Loss 1 0.874008 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401623SN male - YKER13969 10 17859430 18036656 177227 Loss 1 0.874599 24 7705 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "14093(3|de Smith(2007),Conrad(2009),Matsuzaki(2009))" 535(1|Matsuzaki(2009)) 72 11 - 0 "146422(9|Conrad(2009),De(Smith_2007),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401372RR male - HARD47518 4 69367093 69544297 177205 Loss 1 0.928949 59 3055 chas 28.26 Loss 51.06 Loss 57.16 Loss LossLossLoss 78 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "177205(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 65 78 - 0 "177205(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" AWAR79338 Y 22312720 22489344 176625 Loss 0 0.881771 11 17662 chas 24.38 Loss 0 - 0 - Loss-- 8 0 - - "ChAS,IPN" Yq11.223 50001(1|clone) - 0 - 0 - "176625#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "176625(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 8 - 0 "176625(14|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400859SC male research_filter RPWI18802 14 22689703 22866234 176532 Gain 3 0.864766 276 641 chas 0 - 0 - 0 - --- 150 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "176532(12|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 150 - 0 "176532(67|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401580CA male clinical_filter KEHV72339 Y 23719971 23896375 176405 Gain 2 0.927998 125 1422 chas 95.03 Gain 0 - 0 - Gain-- 92 0 - - "ChAS,IPN" Yq11.223 - TTTY13 1 TTTY13 1 - "176405#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "176405(2|Matsuzaki(2009),Perry(2008))" - 94 92 - 0 "176405(4|Locke(2006),Redon(2006),Perry(2008),Sharp(2005))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" UEII10946 22 25746030 25922334 176305 Loss 1 0.911996 64 2798 chas 93.64 Loss 85.26 Loss 94.55 Loss LossLossLoss 239 NA NA NA "ChAS,IPN,NXS,PTK" "22q12.1,22q11.23" - "LRP5L,CRYBB2P1" 2 "LRP5L,CRYBB2P1" 2 - - - "176305(63|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Cooper(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 519(1|Conrad(2005)) 64 238 - 0 "176305(214|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401913GT male "research_filter, clinical_filter" SDOC11846 7 100965601 101141867 176267 Gain 3 0.906619 144 1232 chas 94.66 Gain 96.87 Gain 96.87 Gain GainGainGain 81 94.76 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q22.1 - EMID2 1 EMID2 1 - - - "176267(17|Conrad(2009),Itsara(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" "1463(4|Conrad(2009),Levy(2007),Shaikh(2009),Mills(2006))" - 81 - 0 "176267(66|Conrad(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400325BE male "research_filter, clinical_filter" NUMT67226 7 100965601 101141867 176267 Gain 3 0.891114 144 1232 chas 67.33 Gain 86.97 Gain 98.12 Gain GainGainGain 81 NA NA NA "ChAS,IPN,NXS,PTK" 7q22.1 - EMID2 1 EMID2 1 - - - "176267(17|Conrad(2009),Itsara(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" "1463(4|Conrad(2009),Levy(2007),Shaikh(2009),Mills(2006))" - 81 - 0 "176267(66|Conrad(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401079HJ female "research_filter, clinical_filter" JIVU24920 10 46966534 47142216 175683 Loss 1 0.856118 224 787 chas 0 - 0 - 0 - --- 165 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "175683(36|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 165 - 0 "175683(258|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400168HC female clinical_filter OGJP80646 14 106536991 106712665 175675 Gain 3 0.878919 28 6506 chas 13.65 Gain 18.36 Gain 0 - GainGain- 79 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "175675(51|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 59 79 - 0 "175675(398|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400704LC female research_filter ORXH15927 X 7319728 7495395 175668 Loss 1 0.932235 284 620 chas 99.99 Loss 0 - 0 - Loss-- 134 99.99 Loss "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - "175668#1%""Steroid sulphatase deficiency (STS)"":1725741" - "151452(6|Wang(2007),Redon(2006),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" - - 134 - 0 "175668(9|Wang(2007),Redon(2006),Durbin(2010),Pinto(2007),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" FNSQ39400 15 66344113 66519507 175395 Loss 1 0.921105 208 847 chas 99.11 Loss 97.42 Loss 99.55 Loss LossLossLoss 165 NA NA NA "ChAS,IPN,NXS,PTK" 15q22.31 - MEGF11 1 MEGF11 1 - - - "22189(11|Pang(2010),Kidd(2008),Levy(2007),Shaikh(2009),Tuzun(2005))" 1(1|Levy(2007)) - 165 - 0 "100049(16|Teague(2010),Redon(2006),Kidd(2010),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" BOWS70612 4 69366693 69541963 175271 Gain 3 0.893205 60 2970 chas 28.57 Gain 64.98 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "175271(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "175271(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401975VD male "research_filter, clinical_filter" NJBJ54022 4 69366693 69541963 175271 Gain 3 0.883509 60 2970 chas 0 - 45.83 Gain 0 - -Gain- 78 NA NA NA "ChAS,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "175271(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "175271(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401066MM female "research_filter, clinical_filter" ZJNH41176 6 162624163 162799405 175243 Loss 1 0.914631 184 957 chas 96.52 Loss 98.18 Loss 98.18 Loss LossLossLoss 131 96.52 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 PARK2 1 PARK2 - - "175243(25|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "951(5|Matsuzaki(2009),Bentley(2008))" - 131 PARK2#asd_candidate 1 "175243(47|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Altshuler(2010),Shaikh(2009),Park(2010),Redon(2006),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400285FA female "research_filter, clinical_filter" UXJM82913 15 102253947 102429112 175166 Loss 1 0.889588 433 405 chas 77.55 Loss 39.47 Loss 87.64 Loss LossLossLoss 92 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - "OR4F6,GPCRLTM7,TARSL2,OR4F15" 4 "OR4F6,GPCRLTM7,TARSL2,OR4F15" 4 - "175166#1%""15q26 overgrowth syndrome"":3163423" - "175166(23|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Kidd(2008),Pinto(2007),Tuzun(2005),Shaikh(2009),Zogopoulos(2007))" "570(2|Wheeler(2008),Mills(2006))" 50 92 - 0 "175166(35|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Iafrate(2004),Wilson(2010),Durbin(2010),Kidd(2008),Conrad(2009),Alkan(2009),Tuzun(2005),Locke(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" PXVB29564 9 12097677 12272803 175127 Loss 1 0.927874 124 1423 chas 100 Loss 99.98 Loss 99.92 Loss LossLossLoss 151 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "175127(20|Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" 715(1|Park(2010)) - 151 - 0 "175127(43|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Gusev(2009),Pinto(2007),Perry(2008b),Pinto(2011),Redon(2006),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" FCXX78522 4 69367093 69541963 174871 Gain 3 0.888238 56 3179 chas 28.64 Gain 50.57 Gain 0 - GainGain- 78 65.42 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" AIKT30285 4 69367093 69541963 174871 Gain 3 0.889437 56 3179 chas 67.96 Gain 64.04 Gain 0 - GainGain- 78 69.9 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400618GC male "research_filter, clinical_filter" VUCC31552 4 69367093 69541963 174871 Gain 3 0.880947 56 3179 chas 59.77 Gain 65.4 Gain 0 - GainGain- 78 65.18 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400109LJ male "research_filter, clinical_filter" XOFJ42304 4 69367093 69541963 174871 Gain 3 0.893822 56 3179 chas 28.64 Gain 72.01 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400177CG male "research_filter, clinical_filter" XZZR64566 4 69367093 69541963 174871 Gain 3 0.904662 56 3179 chas 67.75 Gain 69.46 Gain 69.9 Gain GainGainGain 78 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400996MC male "research_filter, clinical_filter" KKRR12131 4 69367093 69541963 174871 Gain 3 0.89803 56 3179 chas 28.64 Gain 69.46 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" ELWV13238 4 69367093 69541963 174871 Gain 3 0.894095 56 3179 chas 28.64 Gain 55.11 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401013GJ male "research_filter, clinical_filter" IENJ56420 4 69367093 69541963 174871 Gain 3 0.889158 56 3179 chas 0 - 71.33 Gain 0 - -Gain- 78 NA NA NA "ChAS,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174871(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174871(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401538NS female "research_filter, clinical_filter" MRIL85955 4 69367129 69541963 174835 Gain 3 0.895666 55 3237 chas 28.64 Gain 69.53 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174835(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 78 - 0 "174835(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400705KK male "research_filter, clinical_filter" UFYD24142 4 69367486 69541963 174478 Gain 3 0.892085 53 3355 chas 0 - 68.82 Gain 54.56 Gain #NAME? 77 NA NA NA "ChAS,NXS,PTK" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "174478(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 66 77 - 0 "174478(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 400313DF female "research_filter, clinical_filter" AVGX21589 9 74109628 74283763 174136 Gain 3 0.904027 128 1371 chas 64.71 Gain 94.62 Gain 94.62 Gain GainGainGain 170 94.18 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9q21.13 - - 0 - 0 - - - "6614(7|Korbel(2007),Redon(2006),Matsuzaki(2009),McKernan(2009),Bentley(2008),McCarroll(2008))" "2100(8|Ahn(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 170 - 0 "103006(36|Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Korbel(2007),Campbell(2011),Mills(2006),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400379BB_1 female "research_filter, clinical_filter" UYUQ10460 22 42781610 42955616 174007 Gain 3 0.899091 108 1626 chas 87.98 Gain 82.7 Gain 96.62 Gain GainGainGain 95 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.2 - "SERHL2,NFAM1,RRP7A,SERHL" 4 "SERHL2,NFAM1,RRP7A,SERHL" 4 - - - "159692(21|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "1489(6|Wheeler(2008),Matsuzaki(2009),Perry(2008))" 30 95 - 0 "174007(96|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),Korbel(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400971MK female "research_filter, clinical_filter" PNEQ37885 7 5760897 5934779 173883 Gain 3 0.899156 152 1151 chas 100 Gain 95.86 Gain 100 Gain GainGainGain 100 NA NA NA "ChAS,IPN,NXS,PTK" 7p22.1 - "RNF216,OCM,ZNF815" 3 "RNF216,OCM,ZNF815" 3 - - 93832(1|Feuk(2005)) "112426(6|de Smith(2007),Itsara(2009),Conrad(2009),Perry(2008),Mills(2006))" "962(5|Wang(2008),Pang(2010),Levy(2007),McKernan(2009),Bentley(2008))" 69 100 - 0 "173883(42|Conrad(2009),Korbel(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Wong(2007),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" QRLG88085 7 100968363 101141867 173505 Gain 3 0.89957 140 1248 chas 96.17 Gain 96.91 Gain 98.09 Gain GainGainGain 79 96.27 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q22.1 - EMID2 1 EMID2 1 - - - "173505(17|Conrad(2009),Itsara(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" "1463(4|Conrad(2009),Levy(2007),Shaikh(2009),Mills(2006))" - 79 - 0 "173505(66|Conrad(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400759FV female "research_filter, clinical_filter" XUUY89365 7 100968363 101141867 173505 Gain 3 0.900539 140 1248 chas 89.37 Gain 98.09 Gain 100 Gain GainGainGain 79 NA NA NA "ChAS,IPN,NXS,PTK" 7q22.1 - EMID2 1 EMID2 1 - - - "173505(17|Conrad(2009),Itsara(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" "1463(4|Conrad(2009),Levy(2007),Shaikh(2009),Mills(2006))" - 79 - 0 "173505(66|Conrad(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" UCHK30425 3 23683778 23857206 173429 Gain 3 0.902811 90 1948 chas 99.98 Gain 92.74 Gain 0 - GainGain- 103 92.63 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3p24.3 - UBE2E1 1 UBE2E1 1 - - - 1499(1|McKernan(2009)) "865(6|Ahn(2009),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 103 - 0 "173429(28|Ahn(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400385LJ female "research_filter, clinical_filter" RMNM29531 2 132107689 132280823 173135 Loss 1 0.903533 143 1219 chas 97.11 Loss 81.48 Loss 100 Loss LossLossLoss 102 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q21.1 - "MIR4784,LOC389043,TUBA3D,WTH3DI,MZT2A,LOC401010,LOC150776" 7 "MIR4784,LOC389043,TUBA3D,WTH3DI,MZT2A,LOC401010,LOC150776" 7 - - - "173135(24|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),McCarroll(2008))" "1035(2|Wheeler(2008),Perry(2008))" 84 102 - 0 "173135(50|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Teague(2010),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" RGHO54100 4 16923578 17096598 173021 Gain 3 0.906341 110 1587 chas 96.56 Gain 97.92 Gain 99.99 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.32 - - 0 - 0 - - - "28833(6|Conrad(2009),Korbel(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Park(2010))" 310(1|Levy(2007)) - 110 - 0 "104076(26|Conrad(2009),Korbel(2007),Kidd(2010b),Levy(2007),Durbin(2010),Kidd(2008),McCarroll(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" JXQB25794 8 39213949 39386952 173004 Gain 3 0.909704 92 1901 chas 81.03 Gain 88.91 Gain 88.41 Gain GainGainGain 70 85.86 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "173004(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" "2386(4|de Smith(2007),Park(2010))" 2 69 - 0 "173004(289|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" NJNE14201 8 39213949 39386952 173004 Gain 3 0.912717 92 1901 chas 81.03 Gain 88.91 Gain 88.91 Gain GainGainGain 70 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "173004(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" "2386(4|de Smith(2007),Park(2010))" 2 69 - 0 "173004(289|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401393JW male "research_filter, clinical_filter" GDLU88739 8 39213949 39386952 173004 Gain 3 0.903454 92 1901 chas 81.03 Gain 88.91 Gain 88.91 Gain GainGainGain 70 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "173004(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" "2386(4|de Smith(2007),Park(2010))" 2 69 - 0 "173004(289|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" JPSN96941 9 28593229 28766228 173000 Loss 1 0.932216 164 1061 chas 97.41 Loss 97.42 Loss 98.72 Loss LossLossLoss 135 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "173000(16|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 135 - 0 "173000(27|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" NFIA96453 1 144307124 144480047 172924 Gain 3 0.883541 28 6404 chas 0 - 0 - 0 - --- 3 0 - - ChAS 1q21.1 50001(1|clone) "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "172924(9|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" 589(10|Matsuzaki(2009)) 71 3 - 0 "172924(69|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400069CN female - WMBQ46007 20 9736493 9909005 172513 Gain 3 0.90102 160 1084 chas 82.83 Gain 84.94 Gain 84.94 Gain GainGainGain 148 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.2 - PAK7 1 PAK7 1 - - - - - - 148 PAK7#asd_candidate 1 "26215(8|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" QCXI89270 1 87307057 87479429 172373 Gain 3 0.901308 167 1038 chas 91.49 Gain 96.88 Gain 97.53 Gain GainGainGain 85 97.63 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p22.3 - "HS2ST1,SEP15" 2 "HS2ST1,SEP15" 2 - - - - 1(1|Levy(2007)) - 85 - 0 "34701(5|Kidd(2008),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" FEZX98083 7 118853849 119026108 172260 Loss 1 0.919359 104 1672 chas 100 Loss 100 Loss 100 Loss LossLossLoss 83 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q31.31 - - 0 - 0 - - - "49104(3|Itsara(2009),Pang(2010),Shaikh(2009))" - - 83 - 0 "172260(17|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" ZKCL87954 21 29188153 29359939 171787 Loss 1 0.90577 95 1827 chas 96.09 Loss 98.04 Loss 98.04 Loss LossLossLoss 89 NA NA NA "ChAS,IPN,NXS,PTK" 21q21.3 - - 0 - 0 - - - 1034(1|Matsuzaki(2009)) - 83 88 - 0 "171787(5|Itsara(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" HAGL80690 15 85539699 85711071 171373 Loss 1 0.929743 143 1206 chas 86.67 Loss 92.78 Loss 92.79 Loss LossLossLoss 102 90.74 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q25.3 - PDE8A 1 PDE8A 1 - - - "124368(3|Zogopoulos(2007),Mills(2006))" 611(1|Mills(2006)) - 102 - 0 "160458(10|Wong(2007),Redon(2006),Durbin(2010),Kidd(2008),Perry(2008b),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" TZSA84286 20 3321335 3492629 171295 Gain 3 0.896307 123 1404 chas 93.65 Gain 99.97 Gain 99.97 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 20p13 - "ATRN,C20orf194" 2 "ATRN,C20orf194" 2 - - - - 680(1|Conrad(2009)) 2 92 - 0 "46836(14|Conrad(2009),Shaikh(2009),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401166WJ female "research_filter, clinical_filter" KGCF91244 7 863281 1034361 171081 Loss 1 0.925746 108 1598 chas 87.82 Loss 93.91 Loss 93.91 Loss LossLossLoss 60 85.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p22.3 - "GET4,COX19,SUN1,CYP2W1,ADAP1" 5 "GET4,COX19,SUN1,CYP2W1,ADAP1" 5 - - - "11912(6|Park(2010),Conrad(2009),Levy(2007),McKernan(2009),Ahn(2009))" "6171(24|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" - 60 - 0 "133651(128|Banerjee(2011),Ahn(2009),Schuster(2010),Pinto(2011),Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Wilson(2010),Park(2010),Teague(2010),Kidd(2008),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" GYNG28087 12 5235862 5406692 170831 Loss 1 0.92372 189 908 chas 92.49 Loss 96 Loss 96 Loss LossLossLoss 190 92.6 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "12p13.32,12p13.31" - - 0 - 0 - - - 1245(1|Shaikh(2009)) "548(2|Wang(2008),Pang(2010))" - 190 - 0 "133788(14|Wong(2007),Wang(2008),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" UCFR59681 5 98739564 98909847 170284 Gain 3 0.8951 80 2155 chas 63.18 Gain 58.61 Gain 0 - GainGain- 82 91.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q21.1 - - 0 - 0 - - - "77098(17|Conrad(2009),Matsuzaki(2009),Perry(2008),McKernan(2009),Altshuler(2010),Wheeler(2008),Shaikh(2009))" "2331(5|Levy(2007),Matsuzaki(2009),Perry(2008))" 62 82 - 0 "170284(50|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Altshuler(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400319HT male "research_filter, clinical_filter" NSQR79941 10 46971945 47142216 170272 Loss 1 0.851323 216 791 chas 0 - 0 - 0 - --- 163 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "170272(36|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 163 - 0 "170272(256|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401077VC female clinical_filter XIWO60009 10 46977471 47147301 169831 Loss 1 0.868063 212 804 chas 0 - 2.06 Loss 0 - -Loss- 164 NA NA NA "ChAS,NXS" 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "169831(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 164 - 0 "169831(256|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402074RR female "research_filter, clinical_filter" JAVP94180 4 69367093 69536713 169621 Gain 3 0.889874 46 3769 chas 0 - 42.83 Gain 0 - -Gain- 74 NA NA NA "ChAS,NXS" 4q13.2 - "UGT2B15,UGT2B17" 2 "UGT2B15,UGT2B17" 2 - - - "169621(35|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 67 74 - 0 "169621(403|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401932GN female research_filter ICCB48361 1 145622531 145792051 169521 Gain 3 0.893786 142 1202 chas 60.82 Gain 87.11 Gain 99.45 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.1 - "CD160,RNF115,GPR89A,PDZK1" 4 "CD160,RNF115,GPR89A,PDZK1" 4 - "169521#1%""1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome"":526871" - "169521(10|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009))" - 28 60 GPR89A#asd_candidate 1 "169521(25|Wang(2007),Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Perry(2008b),Locke(2006),Jakobsson(2008),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401258PC female "research_filter, clinical_filter" FISX28606 9 138139989 138309279 169291 Gain 3 0.891374 92 1860 chas 36.98 Gain 25.95 Gain 0 - GainGain- 124 84.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "169291(44|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Park(2010))" "3063(9|Levy(2007),Bentley(2008),McKernan(2009),Matsuzaki(2009),Mills(2006))" - 124 - 0 "169291(176|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400677HD male "research_filter, clinical_filter" INSC49339 9 138139989 138309279 169291 Gain 3 0.903412 92 1860 chas 80.24 Gain 93.02 Gain 100 Gain GainGainGain 124 NA NA NA "ChAS,IPN,NXS,PTK" 9q34.3 - - 0 - 0 - - - "169291(44|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Park(2010))" "3063(9|Levy(2007),Bentley(2008),McKernan(2009),Matsuzaki(2009),Mills(2006))" - 124 - 0 "169291(176|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" ZEGT44347 10 46966534 47135671 169138 Loss 1 0.855856 220 772 chas 0 - 0 - 0 - --- 162 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 "GPRIN2,LOC728643,PPYR1,LOC643650,SYT15" 5 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "169138(35|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 162 - 0 "169138(249|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401609MB female clinical_filter MGJJ89085 8 115743062 115911935 168874 Loss 1 0.926176 116 1468 chas 95.41 Loss 97.56 Loss 97.56 Loss LossLossLoss 123 95.44 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q23.3 - - 0 - 0 - - - "81113(6|Conrad(2009),McKernan(2009),Pinto(2007),Matsuzaki(2009),Mills(2006))" "678(3|Matsuzaki(2009),Bentley(2008))" - 123 - 0 "122693(26|Conrad(2009),Wong(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" UJRA83281 9 26266001 26434418 168418 Loss 1 0.937671 104 1635 chas 100 Loss 97.46 Loss 97.46 Loss LossLossLoss 121 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.2 - - 0 - 0 - - - "168418(2|Pinto(2007),Zogopoulos(2007))" 954(1|McKernan(2009)) - 121 - 0 "148605(9|Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" MNUZ55770 14 106525299 106693670 168372 Gain 3 0.916433 22 8017 chas 18.12 Gain 24.22 Gain 0 - GainGain- 81 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "168372(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 81 - 0 "168372(402|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400292LP female research_filter TDDJ68763 14 22770617 22938933 168317 Gain 3 0.865708 223 758 chas 0 - 0 - 0 - --- 111 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "168317(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 111 - 0 "168317(117|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401250WD female clinical_filter BWEV96807 10 46981356 47149411 168056 Loss 1 0.852087 208 811 chas 0 - 0 - 0 - --- 158 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "168056(37|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 158 - 0 "168056(259|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 402012RR male clinical_filter YQRK14476 19 20829413 20997330 167918 Gain 3 0.887314 140 1208 chas 94.18 Gain 97.09 Gain 97.09 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF626 1 ZNF626 1 - - "54741(4|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "158138(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - 51 103 - 0 "167918(25|Ahn(2009),Korbel(2007),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" RXRT66436 19 20829413 20997330 167918 Gain 3 0.890243 140 1208 chas 94.18 Gain 97.09 Gain 97.09 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF626 1 ZNF626 1 - - "54741(4|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "158138(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - 51 103 - 0 "167918(25|Ahn(2009),Korbel(2007),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" MOBN67062 14 106525299 106692891 167593 Gain 3 0.9163 20 8820 chas 18.2 Gain 24.33 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "167593(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 78 - 0 "167593(400|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400569WC female research_filter SXXB40252 14 106525299 106692891 167593 Gain 3 0.916671 20 8820 chas 18.2 Gain 25.62 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "167593(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 78 - 0 "167593(400|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401495NR male research_filter JIVU24920 14 106525299 106692891 167593 Gain 3 0.916097 20 8820 chas 18.2 Gain 24.33 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "167593(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 78 - 0 "167593(400|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400168HC female research_filter QRSF74396 14 106525299 106692891 167593 Gain 4 0.933188 20 8820 chas 18.2 Gain 21.21 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "167593(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 78 - 0 "167593(400|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401500OM male research_filter FIIC23299 14 106525299 106692891 167593 Gain 4 0.937605 20 8820 chas 18.2 Gain 23.03 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "167593(50|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 78 - 0 "167593(400|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400843FL female research_filter ZMNN35179 17 36243051 36410559 167509 Gain 3 0.890069 40 4295 chas 0 - 70.69 Gain 0 - -Gain- 8 NA NA NA "ChAS,NXS" 17q12 - "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 - - 54003(1|Kidd(2008)) "167509(25|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 8 - 0 "167509(204|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400430KV male research_filter EMKM20452 14 22798952 22966418 167467 Gain 3 0.888163 208 809 chas 0 - 87.8 Gain 94.05 Gain #NAME? 127 100 Gain GTC "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - 2140(1|Ahn(2009)) "167467(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 127 - 0 "167467(105|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" TQFG68171 10 6673607 6840956 167350 Gain 3 0.908888 144 1170 chas 98.37 Gain 99.19 Gain 99.19 Gain GainGainGain 163 98.8 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p14 - LOC100507127 1 LOC100507127 1 - - - "30439(5|McKernan(2009),Matsuzaki(2009),Mills(2006))" 160(1|McKernan(2009)) - 163 - 0 "167350(15|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" XCWR96625 4 93677564 93844851 167288 Gain 3 0.899371 154 1093 chas 85.27 Gain 95.51 Gain 95.51 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" "4q22.1,4q22.2" - GRID2 1 - 0 - - - 3773(1|Pang(2010)) - - 71 - 0 "18663(5|Pang(2010),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400158FB male "research_filter, clinical_filter" PDHC59420 Y 18417479 18584456 166978 Loss 0 0.839068 49 3478 chas 100 Loss 0 - 0 - Loss-- 81 NA NA NA "ChAS,IPN" Yq11.221 - - 0 - 0 - - - - - 66 81 - 0 166978(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" NFPW24786 12 7975694 8142583 166890 Gain 3 0.9071 108 1559 chas 63.56 Gain 81.39 Gain 80.13 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 22940(2|Kidd(2008)) "166890(54|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1441(2|Levy(2007),Mills(2006))" 16 73 - 0 "166890(173|Wang(2007),McKernan(2009),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Wilson(2010),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" JQGN11749 17 36243781 36410559 166779 Loss 1 0.906747 36 4765 chas 0 - 86.09 Loss 0 - -Loss- 7 NA NA NA "ChAS,NXS" 17q12 - "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 - - 53273(1|Kidd(2008)) "166779(25|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 7 - 0 "166779(204|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400534ME male "research_filter, clinical_filter" PUOR77387 X 65770462 65937194 166733 Gain 4 0.961473 97 1736 chas 97.43 Gain 0 - 0 - Gain-- 87 NA NA NA "ChAS,IPN" Xq12 - EDA2R 1 EDA2R 1 - - - "166733(2|Shaikh(2009),Zogopoulos(2007))" 2(2|Levy(2007)) - 87 - 0 "166733(7|Teague(2010),Levy(2007),Durbin(2010),Bentley(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401603HH female "research_filter, clinical_filter" MAKG95944 X 65770490 65937194 166705 Gain 2 0.933903 96 1754 chas 97.52 Gain 0 - 0 - Gain-- 87 97.68 Gain "BS,GTC,IP6" "ChAS,IPN" Xq12 - EDA2R 1 EDA2R 1 - - - "166705(2|Shaikh(2009),Zogopoulos(2007))" 2(2|Levy(2007)) - 87 - 0 "166705(7|Teague(2010),Levy(2007),Durbin(2010),Bentley(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400041LJ male "research_filter, clinical_filter" IJCV29609 1 121172739 121339317 166579 Gain 3 0.898319 138 1215 chas 99.94 Gain 89.81 Gain 100 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "139061(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 79 73 - 0 "166579(12|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" VZCC67569 15 43888262 44054734 166473 Gain 3 0.879623 104 1616 chas 0 - 0 - 0 - --- 41 NA NA NA ChAS 15q15.3 - "PDIA3,CKMT1A,CATSPER2,CKMT1B,STRC,CATSPER2P1" 6 "PDIA3,CKMT1A,CATSPER2,CKMT1B,STRC,CATSPER2P1" 6 STRC - - "166473(20|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" 784(2|Perry(2008)) 92 41 - 0 "166473(47|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no NA 400906BR male clinical_filter UFJQ31039 1 121172958 121339317 166360 Gain 3 0.889233 136 1232 chas 100 Gain 0 - 100 Gain Gain-Gain 72 100 Gain "BS,GTC,IP6" "ChAS,IPN,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "138842(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 79 72 - 0 "166360(12|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401551MB male "research_filter, clinical_filter" TLUO25428 1 121172958 121339317 166360 Gain 3 0.889816 136 1232 chas 80.49 Gain 89.8 Gain 100 Gain GainGainGain 72 NA NA NA "ChAS,IPN,NXS,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "138842(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 79 72 - 0 "166360(12|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401836SI female "research_filter, clinical_filter" SAHS24305 1 121172958 121339317 166360 Gain 3 0.88624 136 1232 chas 87.78 Gain 89.8 Gain 100 Gain GainGainGain 72 NA NA NA "ChAS,IPN,NXS,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "138842(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 79 72 - 0 "166360(12|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" FGIX67905 14 22770617 22936709 166093 Gain 3 0.876421 208 802 chas 0 - 82.81 Gain 0 - -Gain- 106 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "166093(22|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 106 - 0 "166093(117|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401391PJ male "research_filter, clinical_filter" YDIQ26421 10 135234162 135400250 166089 Gain 3 0.8908 239 697 chas 75.32 Gain 71.1 Gain 93.09 Gain GainGainGain 126 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "CYP2E1,MTG1,SYCE1,SPRN,LOC619207,SPRNP1" 6 "CYP2E1,MTG1,SYCE1,SPRN,LOC619207,SPRNP1" 6 - - - "166089(82|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 19 126 - 0 "166089(175|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401591BE female "research_filter, clinical_filter" GHAL32977 9 28190069 28356095 166027 Loss 1 0.925158 196 851 chas 94.84 Loss 97.29 Loss 99.84 Loss LossLossLoss 139 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "166027(12|Pang(2010),Pinto(2007),Matsuzaki(2009),Shaikh(2009))" 1(1|Levy(2007)) 3 139 - 0 "144594(8|Pang(2010),Itsara(2009),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" QWII30838 1 121172958 121338935 165978 Gain 3 0.884244 135 1238 chas 69.96 Gain 90 Gain 100 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" 1p11.2 - EMBP1 1 EMBP1 1 - - - "138842(4|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 79 71 - 0 "165978(12|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402061PI female "research_filter, clinical_filter" NXEA90195 14 22731262 22897115 165854 Gain 3 0.866164 232 717 chas 0 - 83.36 Gain 0 - -Gain- 126 100 Gain GTC "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "165854(17|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1591(16|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 126 - 0 "165854(106|Sebat(2004),Ahn(2009),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" TDDJ68763 10 46966534 47132184 165651 Loss 1 0.851645 216 770 chas 0 - 0 - 0 - --- 160 NA NA NA ChAS 10q11.22 - "GPRIN2,PPYR1,LOC643650,SYT15" 4 "GPRIN2,PPYR1,LOC643650,SYT15" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "165651(35|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" - 159 - 0 "165651(246|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401250WD female clinical_filter UYAI76550 5 61802729 61968311 165583 Gain 3 0.903247 164 1015 chas 99.99 Gain 99.85 Gain 100 Gain GainGainGain 88 99.95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q12.1 - "LRRC70,IPO11" 2 "LRRC70,IPO11" 2 - - - "2710(2|McKernan(2009),Mills(2006))" "195(4|Levy(2007),Bentley(2008),Mills(2006))" 3 88 - 0 "52636(14|Kidd(2008),McKernan(2009),Bentley(2008),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" ZKCL87954 X 6455150 6620307 165158 Gain 2 0.930305 642 257 chas 99.97 Gain 0 - 0 - Gain-- 126 NA NA NA "ChAS,IPN" Xp22.31 - - 0 - 0 - "165158#1%""Steroid sulphatase deficiency (STS)"":1725741" - "165158(13|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 0 126 - 0 "165158(15|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" SFLX52247 15 24339754 24504770 165017 Gain 3 0.883498 146 1138 chas 46.73 Gain 86.77 Gain 89.44 Gain GainGainGain 101 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "165017#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "165017(55|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "210(2|Levy(2007),Wheeler(2008))" 95 101 - 0 "165017(111|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pinto(2007),Durbin(2010),Pang(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Ju(2010),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" VKJV88264 10 20867222 21032227 165006 Gain 3 0.899437 164 1012 chas 93.06 Gain 95.36 Gain 100 Gain GainGainGain 174 95.38 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p12.31 - - 0 - 0 - - - "41983(2|Pinto(2007),Redon(2006))" - - 174 - 0 "119936(11|Wong(2007),Redon(2006),Itsara(2009),Kidd(2008),Pinto(2007),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" RJMG42549 10 46971945 47135671 163727 Loss 1 0.860189 212 775 chas 0 - 0 - 0 - --- 160 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "163727(35|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 160 - 0 "163727(247|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400749VW male clinical_filter XSKZ13040 16 21576803 21740274 163472 Loss 1 0.925173 172 955 chas 88.07 Loss 88.19 Loss 88.19 Loss LossLossLoss 104 NA NA NA "ChAS,IPN,NXS,PTK" 16p12.2 - "METTL9,IGSF6,OTOA" 3 "METTL9,IGSF6,OTOA" 3 OTOA "126319#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" "162460(6|Pang(2010),Kidd(2008),Korbel(2007),Tuzun(2005))" "163472(29|Wang(2007),McKernan(2009),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Ju(2010),Cooper(2008),Park(2010),Jakobsson(2008),McCarroll(2008),Kim(2009),Zogopoulos(2007))" 855(1|Conrad(2009)) - 104 - 0 "163472(156|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401824MM female "research_filter, clinical_filter" IUXY17884 9 119321362 119484313 162952 Loss 1 0.906494 212 772 chas 99.8 Loss 99.9 Loss 99.9 Loss LossLossLoss 140 NA NA NA "ChAS,IPN,NXS,PTK" 9q33.1 - "ASTN2,LOC100128505,TRIM32" 3 "ASTN2,LOC100128505,TRIM32" 3 TRIM32 - - 1712(1|McKernan(2009)) "698(4|Wang(2008),Wheeler(2008),Ahn(2009),Bentley(2008))" - 140 ASTN2#asd_candidate 1 "162952(23|Ahn(2009),Wong(2007),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401238QR male "research_filter, clinical_filter" KRCX57170 4 129774954 129937866 162913 Gain 3 0.894126 174 941 chas 97.65 Gain 98.27 Gain 100 Gain GainGainGain 89 98.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q28.2 - "SCLT1,PHF17" 2 "SCLT1,PHF17" 2 - - - 138392(1|Zogopoulos(2007)) - - 88 - 0 "162913(5|Kidd(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" GYLD25146 14 106530534 106693442 162909 Loss 0 0.944369 19 9050 chas 18.69 Loss 23.76 Loss 19.83 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400132HN female research_filter GPXE42967 14 106530534 106693442 162909 Loss 0 0.939636 19 9050 chas 18.69 Loss 23.76 Loss 12.82 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400006DK female research_filter KRGM31190 14 106530534 106693442 162909 Loss 0 0.938724 19 9050 chas 18.69 Loss 23.76 Loss 16.62 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male research_filter VKJV88264 14 106530534 106693442 162909 Loss 0 0.934047 19 9050 chas 18.69 Loss 23.76 Loss 19.83 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401950MD male research_filter PEZC72297 14 106530534 106693442 162909 Loss 0 0.94206 19 9050 chas 18.69 Loss 23.76 Loss 12.82 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400298ME male research_filter GYBK42448 14 106530534 106693442 162909 Loss 0 0.94868 19 9050 chas 18.69 Loss 16.62 Loss 7.1 Loss LossLossLoss 76 18.97 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401277RA female research_filter NBJX82400 14 106530534 106693442 162909 Loss 0 0.931736 19 9050 chas 18.69 Loss 19.83 Loss 12.82 Loss LossLossLoss 76 18.97 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400014SL female research_filter YMTT86375 14 106530534 106693442 162909 Loss 0 0.936472 19 9050 chas 18.69 Loss 23.76 Loss 12.82 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400797ST male research_filter YLVO48162 14 106530534 106693442 162909 Loss 0 0.945369 19 9050 chas 18.69 Loss 19.83 Loss 16.62 Loss LossLossLoss 76 22.45 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400876OG male research_filter DQOB10223 14 106530534 106693442 162909 Loss 0 0.938714 19 9050 chas 18.69 Loss 18.5 Loss 12.82 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401567BD male research_filter MRIL85955 14 106530534 106693442 162909 Loss 0 0.93501 19 9050 chas 18.69 Loss 16.62 Loss 7.1 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400705KK male research_filter WFGA96432 14 106530534 106693442 162909 Loss 0 0.937246 19 9050 chas 18.69 Loss 23.76 Loss 23.76 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401493HC male research_filter KKFR54086 14 106530534 106693442 162909 Loss 0 0.946484 19 9050 chas 18.69 Loss 23.76 Loss 12.82 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "162909(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 64 76 - 0 "162909(387|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401443JK male research_filter GDLU88739 7 118863298 119026108 162811 Loss 1 0.906145 100 1644 chas 100 Loss 100 Loss 100 Loss LossLossLoss 81 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.31 - - 0 - 0 - - - "49104(3|Itsara(2009),Pang(2010),Shaikh(2009))" - - 81 - 0 "162811(17|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" RYTQ14327 14 106342889 106505481 162593 Loss 1 0.894002 19 9032 chas 100 Loss 90.23 Loss 99.95 Loss LossLossLoss 52 91.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - "ADAM6,KIAA0125" 2 "ADAM6,KIAA0125" 2 - - - "162593(89|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Tuzun(2005),Park(2010),Kim(2009))" "3472(6|Park(2010),Conrad(2009),Levy(2007))" 57 52 - 0 "162593(700|Teague(2010),Korbel(2007),Wang(2007),Campbell(2011),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Tuzun(2005),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400374LB female research_filter NJBJ54022 10 18037328 18199800 162473 Gain 3 0.877318 36 4642 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 10p12.33 - "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 100 14 - 0 "162473(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401066MM female - SFLX52247 X 149028748 149191189 162442 Gain 2 0.920248 103 1592 chas 57.72 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq28 50001(1|contig) "CXorf40B,LOC100272228" 2 "CXorf40B,LOC100272228" 2 - - - "101059(14|Conrad(2009),McCarroll(2008),Redon(2006),Matsuzaki(2009),Perry(2008))" 929(1|Matsuzaki(2009)) 19 58 - 0 "162442(13|Conrad(2009),McCarroll(2008),Durbin(2010),Perry(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" WVAB12930 18 62117453 62279691 162239 Gain 3 0.89183 96 1707 chas 85.2 Gain 95.2 Gain 98.21 Gain GainGainGain 94 88.86 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - 851(1|Ahn(2009)) "50778(5|Wang(2007),McKernan(2009),Simon-Sanchez(2007),Conrad(2009))" 2(2|Levy(2007)) - 94 - 0 "155463(53|Conrad(2009),Ahn(2009),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Pinto(2011),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400655WB female "research_filter, clinical_filter" TZGC22320 10 105151033 105313230 162198 Gain 3 0.903099 108 1515 chas 55.73 Gain 92.4 Gain 92.4 Gain GainGainGain 91 95.68 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q24.33 - "USMG5,CALHM3,CALHM2,NEURL,CALHM1,MIR1307,PDCD11" 7 "USMG5,CALHM3,CALHM2,NEURL,CALHM1,MIR1307,PDCD11" 7 - - - "7400(2|Conrad(2009),Conrad(2005))" - - 91 - 0 "149705(8|Kidd(2008),Conrad(2006),Durbin(2010),Shaikh(2009),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401295HB male "research_filter, clinical_filter" KXKI34745 10 26513572 26675752 162181 Gain 3 0.903047 152 1074 chas 99.56 Gain 100 Gain 100 Gain GainGainGain 137 NA NA NA "ChAS,IPN,NXS,PTK" 10p12.1 - GAD2 1 GAD2 1 - - - "4096(3|Conrad(2009),Matsuzaki(2009))" "949(3|Matsuzaki(2009),Bentley(2008))" - 137 - 0 "7497(15|Pinto(2011),Conrad(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" AVJL63299 7 152589484 152751639 162156 Loss 1 0.921948 120 1362 chas 97.27 Loss 98.54 Loss 98.54 Loss LossLossLoss 133 NA NA NA "ChAS,IPN,NXS,PTK" "7q36.2,7q36.1" - - 0 - 0 - - - "18249(2|Itsara(2009),Kidd(2008))" - - 133 - 0 "64401(28|Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" TGHP62000 14 106044263 106206398 162136 Gain 3 0.910595 25 6755 chas 0 - 73.41 Gain 100 Gain #NAME? 29 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 34203(1|Kidd(2008)) "162136(62|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4899(17|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 29 - 0 "162136(342|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wong(2007),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400882DD male research_filter YKLI59783 3 53755409 53917332 161924 Gain 3 0.907299 183 889 chas 99.42 Gain 99.5 Gain 99.5 Gain GainGainGain 120 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.1 - "CHDH,CACNA1D,IL17RB,ACTR8" 4 "CHDH,CACNA1D,IL17RB,ACTR8" 4 - - - - - - 120 - 0 "73537(8|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" NXEA90195 14 51013516 51175303 161788 Loss 1 0.914518 164 992 chas 98.56 Loss 98.38 Loss 99.28 Loss LossLossLoss 78 98.56 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q22.1 - "ATL1,SAV1" 2 "ATL1,SAV1" 2 ATL1 - - - 811(1|Park(2010)) 4 78 - 0 "49713(9|Park(2010),Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" SLNP19984 9 138147641 138309279 161639 Gain 3 0.911358 91 1795 chas 29.32 Gain 90.21 Gain 0 - GainGain- 123 NA NA NA "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "161639(43|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Park(2010))" "3063(9|Levy(2007),Bentley(2008),McKernan(2009),Matsuzaki(2009),Mills(2006))" - 123 - 0 "161639(175|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" QKZI23426 8 39225875 39386952 161078 Gain 3 0.915726 84 1940 chas 87.03 Gain 99.93 Gain 95.5 Gain GainGainGain 66 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "161078(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 66 - 0 "161078(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400943DV female "research_filter, clinical_filter" MGJR69521 1 196716413 196877037 160625 Loss 1 0.917681 66 2471 chas 30.13 Loss 99.7 Loss 99.76 Loss LossLossLoss 153 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.3 - "CFHR3,CFHR1,CFHR4,CFH" 4 "CFHR3,CFHR1,CFHR4,CFH" 4 "CFHR3,CFHR1,CFH" - - "160625(65|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Wang(2008),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "1508(3|McCarroll(2005),Conrad(2005),Mills(2006))" 65 154 - 0 "160625(379|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401251WN female "research_filter, clinical_filter" ZMDC73313 8 39226336 39386952 160617 Gain 3 0.91393 80 2033 chas 87.28 Gain 94.22 Gain 87.17 Gain GainGainGain 63 94.24 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401165SB female "research_filter, clinical_filter" NKHQ61532 8 39226336 39386952 160617 Gain 3 0.900013 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 94.24 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" JPDY25055 8 39226336 39386952 160617 Gain 3 0.905031 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 97.61 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401102RD male "research_filter, clinical_filter" XKMM87171 8 39226336 39386952 160617 Gain 3 0.89995 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 94.24 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400634MP male "research_filter, clinical_filter" YCLA52151 8 39226336 39386952 160617 Gain 3 0.913071 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 94.24 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400173KP female "research_filter, clinical_filter" NEPL50430 8 39226336 39386952 160617 Gain 3 0.904336 80 2033 chas 87.28 Gain 95.77 Gain 94.08 Gain GainGainGain 63 94.24 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401084BD male "research_filter, clinical_filter" KSNB36135 8 39226336 39386952 160617 Gain 3 0.915813 80 2033 chas 87.28 Gain 98.71 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401677MM female "research_filter, clinical_filter" PRED73338 8 39226336 39386952 160617 Gain 3 0.914703 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" ICZT95489 8 39226336 39386952 160617 Gain 3 0.911242 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401386WA male "research_filter, clinical_filter" HEJH85210 8 39226336 39386952 160617 Gain 3 0.919171 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" KAAS48951 8 39226336 39386952 160617 Gain 3 0.917281 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401504RJ male "research_filter, clinical_filter" QYCK62831 8 39226336 39386952 160617 Gain 3 0.905314 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401556KR male "research_filter, clinical_filter" GNMX63810 8 39226336 39386952 160617 Gain 3 0.904726 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" QITC50272 8 39226336 39386952 160617 Gain 3 0.902697 80 2033 chas 87.28 Gain 98.71 Gain 97.52 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" UECJ73760 8 39226336 39386952 160617 Gain 3 0.908682 80 2033 chas 87.28 Gain 95.77 Gain 95.77 Gain GainGainGain 63 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "160617(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "160617(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" NCUZ14929 10 46981608 47142216 160609 Loss 1 0.858656 196 823 chas 0 - 0 - 0 - --- 147 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "160609(36|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 147 - 0 "160609(254|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401111LH male clinical_filter KIIK22313 14 22798952 22959362 160411 Loss 1 0.854234 196 822 chas 0 - 0 - 0 - --- 111 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "160411(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 111 - 0 "160411(101|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401496SL male clinical_filter FSLR52955 17 36243781 36404138 160358 Gain 3 0.895552 33 5011 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 17q12 - "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 - - 53273(1|Kidd(2008)) "160358(25|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 5 - 0 "160358(204|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400987FB male - YOPA81411 11 37665487 37825768 160282 Loss 1 0.914798 128 1262 chas 99.99 Loss 91.04 Loss 100 Loss LossLossLoss 112 NA NA NA "ChAS,IPN,NXS,PTK" 11p12 - - 0 - 0 - - - "54060(4|McKernan(2009),Shaikh(2009))" "1776(7|Levy(2007),McKernan(2009),Ahn(2009),Wheeler(2008),Bentley(2008))" - 112 - 0 "104413(37|Teague(2010),Ahn(2009),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" KWYE93203 6 17484669 17644779 160111 Gain 3 0.904661 180 894 chas 99.09 Gain 99.55 Gain 100 Gain GainGainGain 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.3 - "FAM8A1,NUP153,CAP2" 3 "FAM8A1,NUP153,CAP2" 3 - - - - - 1 114 CAP2#asd_candidate 1 "160111(7|Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401357MH male "research_filter, clinical_filter" FSGH36026 X 130810042 130969981 159940 Gain 2 0.935045 156 1031 chas 96.85 Gain 0 - 0 - Gain-- 104 NA NA NA "ChAS,IPN" Xq26.2 - LOC286467 1 LOC286467 1 - - - - 932(2|Matsuzaki(2009)) 3 104 - 0 "100380(9|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" EGVC41637 18 66716404 66876246 159843 Gain 3 0.903405 100 1614 chas 94.78 Gain 100 Gain 100 Gain GainGainGain 168 NA NA NA "ChAS,IPN,NXS,PTK" "18q22.1,18q22.2" - CCDC102B 1 CCDC102B 1 - - - "145727(30|Wang(2007),Redon(2006),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" - - 168 - 0 "159843(161|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Park(2010),Pinto(2011),Jakobsson(2008),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401939GD male "research_filter, clinical_filter" OBWN97941 3 90343134 90502849 159716 Loss 1 0.873134 36 4563 chas 18.73 Loss 0 - 0 - Loss-- 16 0 - - "ChAS,IPN" 3p11.1 - - 0 - 0 - - - "159716(5|Conrad(2009),Ahn(2009),McKernan(2009),Kim(2009),Ju(2010))" "465(3|Levy(2007),McKernan(2009))" - 16 - 0 "159716(35|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),McKernan(2009),Durbin(2010),Wilson(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400113LD female "research_filter, clinical_filter" ZQFY18932 11 56078073 56237487 159415 Loss 1 0.908286 200 801 chas 98.44 Loss 98.34 Loss 99.81 Loss LossLossLoss 111 NA NA NA "ChAS,IPN,NXS,PTK" 11q12.1 - "OR5M9,OR5M3,OR5R1,OR8U8,OR8K1,OR8K3,OR8J1,OR8U1" 8 "OR5M9,OR5M3,OR5R1,OR8U8,OR8K1,OR8K3,OR8J1,OR8U1" 8 - - - "44186(10|Young(2008),Kidd(2008),Park(2010))" 1222(2|Park(2010)) 3 111 - 0 "96385(13|Teague(2010),Wong(2007),Kidd(2010b),Kidd(2010),Kidd(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" RBTV68848 9 74124588 74283763 159176 Gain 3 0.91178 118 1360 chas 100 Gain 100 Gain 100 Gain GainGainGain 158 NA NA NA "ChAS,IPN,NXS,PTK" 9q21.13 - - 0 - 0 - - - "6614(7|Korbel(2007),Redon(2006),Matsuzaki(2009),McKernan(2009),Bentley(2008),McCarroll(2008))" "2100(8|Ahn(2009),Perry(2008),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 158 - 0 "103006(36|Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Korbel(2007),Campbell(2011),Mills(2006),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" GYBK42448 13 108332296 108490799 158504 Loss 1 0.927765 208 765 chas 96.55 Loss 98.28 Loss 98.28 Loss LossLossLoss 134 96.56 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q33.3 - FAM155A 1 - 0 - - - "7489(2|Pang(2010),Redon(2006))" "917(3|Shaikh(2009),Bentley(2008))" - 134 - 0 "150690(16|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401277RA female "research_filter, clinical_filter" KWJN47187 8 39230312 39388766 158455 Gain 3 0.898459 79 2031 chas 88.47 Gain 97.66 Gain 97.66 Gain GainGainGain 63 95.53 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "158455(38|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 63 - 0 "158455(289|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" YDHD10968 Y 16133590 16292038 158449 Gain 2 0.938765 213 747 chas 89.24 Gain 0 - 0 - Gain-- 106 NA NA NA "ChAS,IPN" Yq11.221 - "VCY,VCY1B" 2 "VCY,VCY1B" 2 - - - - - 24 106 - 0 155207(3|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401355CD male "research_filter, clinical_filter" KEHV72339 12 127021455 127179372 157918 Gain 4 0.953839 96 1662 chas 100 Gain 100 Gain 100 Gain GainGainGain 121 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.32 - - 0 - 0 - - - "1856(2|Conrad(2009),Ju(2010))" 142(1|Levy(2007)) - 121 - 0 "157918(15|Ju(2010),Conrad(2009),Levy(2007),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" NYDB63609 8 39226489 39384337 157849 Gain 3 0.90053 75 2133 chas 87.15 Gain 95.79 Gain 100 Gain GainGainGain 59 94.23 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "157849(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "157849(288|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400138LA female "research_filter, clinical_filter" KWYE93203 9 28190069 28347524 157456 Loss 1 0.927458 193 820 chas 100 Loss 100 Loss 100 Loss LossLossLoss 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "157456(12|Pang(2010),Pinto(2007),Matsuzaki(2009),Shaikh(2009))" 1(1|Levy(2007)) 4 137 - 0 "144594(8|Pang(2010),Itsara(2009),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401357MH male "research_filter, clinical_filter" GNMX63810 9 28190069 28347524 157456 Loss 1 0.934148 193 820 chas 100 Loss 100 Loss 100 Loss LossLossLoss 137 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "157456(12|Pang(2010),Pinto(2007),Matsuzaki(2009),Shaikh(2009))" 1(1|Levy(2007)) 4 137 - 0 "144594(8|Pang(2010),Itsara(2009),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" LYLG55293 12 131958370 132115667 157298 Gain 3 0.903929 112 1417 chas 92.22 Gain 93.11 Gain 93.1 Gain GainGainGain 167 97.3 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 157298(1|Korbel(2007)) "157298(21|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Redon(2006),McCarroll(2008))" "4737(13|Conrad(2009),Levy(2007),McKernan(2009),Kim(2009),Perry(2008))" 6 167 - 0 "157298(72|Conrad(2009),Korbel(2007),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2007),Wang(2007),Pinto(2011),Redon(2006),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" HAGL80690 10 45210690 45367803 157114 Gain 3 0.901133 116 1366 chas 90.56 Gain 77.2 Gain 96.42 Gain GainGainGain 120 93.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "157114(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 120 - 0 "157114(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" DZVA59681 10 45210690 45367803 157114 Gain 3 0.914682 116 1366 chas 85.28 Gain 95.92 Gain 93.55 Gain GainGainGain 120 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "157114(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 120 - 0 "157114(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" FNSQ39400 20 29421118 29578144 157027 Loss 1 0.86251 61 2617 chas 0 - 0 - 0 - --- 47 NA NA NA ChAS 20q11.21 - - 0 - 0 - - - "157027(26|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008),Wheeler(2008))" - 100 47 - 0 "157027(35|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Pang(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Korbel(2007))" TRUE TRUE ipn_no algo_no NA 400721DJ male clinical_filter TAVH54072 11 50438535 50595389 156855 Loss 1 0.904705 36 4481 chas 0 - 72.63 Loss 76.56 Loss #NAME? 28 NA NA NA "ChAS,NXS,PTK" 11p11.12 - - 0 - 0 - - - "156855(9|Itsara(2009),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009))" - - 28 - 0 "156855(35|Conrad(2009),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400948EV female "research_filter, clinical_filter" YTCX24219 11 50438535 50595389 156855 Loss 1 0.880166 36 4481 chas 0 - 0 - 0 - --- 28 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "156855(9|Itsara(2009),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009))" - - 28 - 0 "156855(35|Conrad(2009),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400502GS female clinical_filter FPHR45460 12 131958370 132115091 156722 Gain 3 0.897899 110 1437 chas 92.56 Gain 89.9 Gain 100 Gain GainGainGain 166 95.57 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 156722(1|Korbel(2007)) "156722(19|Conrad(2009),Jakobsson(2008),Perry(2008),Itsara(2009),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Redon(2006),McCarroll(2008))" "4737(13|Conrad(2009),Levy(2007),McKernan(2009),Kim(2009),Perry(2008))" 5 166 - 0 "156722(70|Conrad(2009),Korbel(2007),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2007),Pinto(2011),Redon(2006),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" FPLE23103 5 46208805 46365514 156710 Loss 1 0.899855 38 4235 chas 0.31 Loss 52.48 Loss 0 - LossLoss- 34 NA NA NA "ChAS,IPN,NXS" 5p11 - - 0 - 0 - - - "156710(21|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 34 - 0 "156710(79|Conrad(2009),Korbel(2007),Ju(2010),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" YTCX24219 5 46208805 46365514 156710 Loss 1 0.883637 38 4235 chas 0 - 90.24 Loss 100 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 5p11 - - 0 - 0 - - - "156710(21|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 34 - 0 "156710(79|Conrad(2009),Korbel(2007),Ju(2010),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400502GS female "research_filter, clinical_filter" TAVH54072 5 46208805 46365514 156710 Loss 1 0.916545 38 4235 chas 0 - 90.24 Loss 0 - -Loss- 34 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "156710(21|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 34 - 0 "156710(79|Conrad(2009),Korbel(2007),Ju(2010),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400948EV female "research_filter, clinical_filter" QMSH77829 14 106536991 106693670 156680 Loss 0 0.950537 18 9216 chas 15.31 Loss 20.59 Loss 19.2 Loss LossLossLoss 75 15.61 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156680(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 75 - 0 "156680(374|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400038CK male research_filter JYQV48819 13 57888566 58045225 156660 Gain 3 0.89327 104 1520 chas 88.88 Gain 100 Gain 100 Gain GainGainGain 91 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q21.1 - - 0 - 0 - - - "151894(17|Wang(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),McCarroll(2008),Park(2010),Redon(2006),Shaikh(2009))" "2972(11|Ahn(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008))" - 91 - 0 "156660(54|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Conrad(2006),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Altshuler(2010),Pinto(2011),Jakobsson(2008),Mills(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400449PK female "research_filter, clinical_filter" YBMF74034 8 39230312 39386952 156641 Gain 3 0.89638 78 2034 chas 89.49 Gain 98.2 Gain 89.28 Gain GainGainGain 61 96.63 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "156641(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 61 - 0 "156641(287|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" WLVX71025 8 39230312 39386952 156641 Gain 3 0.918946 78 2034 chas 89.49 Gain 98.2 Gain 94.97 Gain GainGainGain 61 96.63 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "156641(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 61 - 0 "156641(287|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400064WJ female "research_filter, clinical_filter" YSDD20509 8 39230312 39386952 156641 Gain 3 0.913996 78 2034 chas 89.49 Gain 100 Gain 100 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "156641(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 61 - 0 "156641(287|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" USNP20353 15 100934262 101090886 156625 Gain 3 0.910474 267 588 chas 71.67 Gain 92.1 Gain 99.36 Gain GainGainGain 144 98.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - CERS3 1 CERS3 1 - "156625#1%""15q26 overgrowth syndrome"":3163423" - "156625(5|Pang(2010),Kidd(2008),McKernan(2009),Jakobsson(2008))" "817(8|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" 2 144 - 0 "156625(35|Ahn(2009),Wong(2007),Jakobsson(2008),Kidd(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400082SD female "research_filter, clinical_filter" FOMC40154 14 106536991 106693442 156452 Loss 0 0.94406 17 9778 chas 15.33 Loss 20.62 Loss 17.27 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401096SL male research_filter XKMM87171 14 106536991 106693442 156452 Loss 0 0.954309 17 9778 chas 15.33 Loss 20.62 Loss 19.52 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400634MP male research_filter XMVT70735 14 106536991 106693442 156452 Loss 0 0.953348 17 9778 chas 15.33 Loss 20.62 Loss 10.77 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401873BK male research_filter SDOC11846 14 106536991 106693442 156452 Loss 0 0.953547 17 9778 chas 15.33 Loss 20.62 Loss 19.52 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400325BE male research_filter WCSO50334 14 106536991 106693442 156452 Loss 0 0.952312 17 9778 chas 15.33 Loss 19.23 Loss 13.32 Loss LossLossLoss 73 15.63 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400073HT male research_filter XBAT84080 14 106536991 106693442 156452 Loss 0 0.948166 17 9778 chas 15.33 Loss 20.62 Loss 19.52 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400186WC female research_filter QAGW25123 14 106536991 106693442 156452 Loss 0 0.947966 17 9778 chas 15.33 Loss 17.27 Loss 7.36 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400234CA female research_filter RDPM47345 14 106536991 106693442 156452 Loss 0 0.947075 17 9778 chas 15.33 Loss 20.62 Loss 13.92 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400554WB male research_filter EUQI28257 14 106536991 106693442 156452 Loss 0 0.94884 17 9778 chas 15.33 Loss 20.62 Loss 13.92 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400920MK female research_filter DGQM75197 14 106536991 106693442 156452 Loss 0 0.939018 17 9778 chas 15.33 Loss 19.23 Loss 19.23 Loss LossLossLoss 73 15.63 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400518MS female research_filter EZDG77492 14 106536991 106693442 156452 Loss 0 0.951141 17 9778 chas 15.33 Loss 20.62 Loss 13.32 Loss LossLossLoss 73 19.25 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400308SP male research_filter JHGL98054 14 106536991 106693442 156452 Loss 0 0.945053 17 9778 chas 15.33 Loss 19.23 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400368SD female research_filter AJUD27157 14 106536991 106693442 156452 Loss 0 0.951681 17 9778 chas 15.33 Loss 20.62 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401075MN female research_filter IJCH39724 14 106536991 106693442 156452 Loss 0 0.946736 17 9778 chas 15.33 Loss 20.62 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401571SD male research_filter LMJA76842 14 106536991 106693442 156452 Loss 0 0.932333 17 9778 chas 15.33 Loss 19.23 Loss 19.52 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401284GM female research_filter BTDG34378 14 106536991 106693442 156452 Loss 0 0.940638 17 9778 chas 15.33 Loss 20.62 Loss 19.52 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401366WD male research_filter MJBR37071 14 106536991 106693442 156452 Loss 0 0.935362 17 9778 chas 15.33 Loss 20.62 Loss 17.27 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400570RW male research_filter YJHX17222 14 106536991 106693442 156452 Loss 0 0.943783 17 9778 chas 15.33 Loss 19.23 Loss 13.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401728WK female research_filter KSUK43841 14 106536991 106693442 156452 Loss 0 0.93878 17 9778 chas 15.33 Loss 13.32 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401762SD male research_filter TABQ91013 14 106536991 106693442 156452 Loss 0 0.940293 17 9778 chas 15.33 Loss 19.23 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400934LA female research_filter GHOG89686 14 106536991 106693442 156452 Loss 0 0.939635 17 9778 chas 15.33 Loss 20.62 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401459HF male research_filter FNSQ39400 14 106536991 106693442 156452 Loss 0 0.935531 17 9778 chas 15.33 Loss 20.62 Loss 13.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400721DJ male research_filter VAON88685 14 106536991 106693442 156452 Loss 0 0.937036 17 9778 chas 15.33 Loss 17.27 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401783BD male research_filter ZZDG28391 14 106536991 106693442 156452 Loss 0 0.942284 17 9778 chas 15.33 Loss 17.27 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400801HS female research_filter YQRA83123 14 106536991 106693442 156452 Loss 0 0.949244 17 9778 chas 15.33 Loss 19.23 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400416KA male research_filter THNQ55263 14 106536991 106693442 156452 Loss 0 0.937053 17 9778 chas 15.33 Loss 20.62 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400960TN female research_filter FCIS19557 14 106536991 106693442 156452 Loss 0 0.944774 17 9778 chas 15.33 Loss 19.23 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401931JL female research_filter YBSU20689 14 106536991 106693442 156452 Loss 0 0.935156 17 9778 chas 15.33 Loss 20.62 Loss 18.42 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401278DM female research_filter QRNV11451 14 106536991 106693442 156452 Loss 0 0.941864 17 9778 chas 15.33 Loss 22 Loss 20.91 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401918CA male research_filter IDKP47812 14 106536991 106693442 156452 Loss 0 0.949488 17 9778 chas 15.33 Loss 20.62 Loss 7.36 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401377MA male research_filter NJNE14201 14 106536991 106693442 156452 Loss 0 0.940551 17 9778 chas 15.33 Loss 17.27 Loss 13.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401393JW male research_filter IZPX82976 14 106536991 106693442 156452 Loss 0 0.929578 17 9778 chas 15.33 Loss 19.23 Loss 22 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401693RC male research_filter UMLY49839 14 106536991 106693442 156452 Loss 0 0.926246 17 9778 chas 15.33 Loss 20.62 Loss 19.52 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401419SW male research_filter YDLH53232 14 106536991 106693442 156452 Loss 0 0.933546 17 9778 chas 15.33 Loss 20.62 Loss 21.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401691HA male research_filter BWCN37814 14 106536991 106693442 156452 Loss 0 0.941763 17 9778 chas 15.33 Loss 20.62 Loss 20.91 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401966SR male research_filter RAQB29487 14 106536991 106693442 156452 Loss 0 0.940798 17 9778 chas 15.33 Loss 20.62 Loss 13.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401746WW male research_filter WMOD47474 14 106536991 106693442 156452 Loss 0 0.946023 17 9778 chas 15.33 Loss 20.62 Loss 13.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401489CB male research_filter UYUQ10460 14 106536991 106693442 156452 Loss 0 0.947841 17 9778 chas 15.33 Loss 20.62 Loss 21.92 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400971MK female research_filter FCFF79727 14 106536991 106693442 156452 Loss 0 0.960118 17 9778 chas 15.33 Loss 20.62 Loss 13.32 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401384BP male research_filter GUYS21436 14 106536991 106693442 156452 Loss 0 0.942061 17 9778 chas 15.33 Loss 19.23 Loss 23.01 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400582WS female research_filter YBMF74034 14 106536991 106693442 156452 Loss 0 0.950874 17 9778 chas 0 - 19.23 Loss 13.32 Loss #NAME? 73 19.24 Loss "GTC,IP6" "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - - "156452(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 66 73 - 0 "156452(373|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401806DL male research_filter LHMB79045 16 73163923 73320309 156387 Gain 3 0.911767 81 1954 chas 100 Gain 97.81 Gain 97.81 Gain GainGainGain 86 NA NA NA "ChAS,IPN,NXS,PTK" 16q22.3 - - 0 - 0 - - - - 793(2|de Smith(2007)) - 86 - 0 "156387(11|Kidd(2008),Shaikh(2009),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401285HN male "research_filter, clinical_filter" JILG60414 22 47722840 47879110 156271 Loss 1 0.917107 110 1433 chas 99.99 Loss 95.72 Loss 95.73 Loss LossLossLoss 130 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.31 - LOC339685 1 LOC339685 1 - - - "33313(4|Itsara(2009),McKernan(2009),Matsuzaki(2009))" "1084(7|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Mills(2006))" - 130 - 0 "61372(23|Conrad(2009),Ahn(2009),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400278PD male "research_filter, clinical_filter" VZCC67569 14 106693442 106849677 156236 Gain 3 0.901394 60 2648 chas 53.7 Gain 58.38 Gain 64.32 Gain GainGainGain 74 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "156236(80|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 45 74 - 0 "156236(418|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" ICCB48361 14 106693442 106849677 156236 Gain 3 0.884869 60 2648 chas 37.05 Gain 38.32 Gain 0 - GainGain- 74 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "156236(80|Sebat(2004),Ahn(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006))" "2913(5|Pang(2010),Park(2010),Levy(2007),Bentley(2008))" 45 74 - 0 "156236(418|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Iafrate(2004),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401258PC female "research_filter, clinical_filter" ZRAK81940 19 20829413 20985425 156013 Gain 3 0.896652 138 1138 chas 21.45 Gain 100 Gain 100 Gain GainGainGain 99 99.89 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF626 1 ZNF626 1 - - "54741(4|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "156013(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - 49 99 - 0 "156013(25|Ahn(2009),Korbel(2007),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401864CV female "research_filter, clinical_filter" FRXS36515 14 106536991 106692891 155901 Gain 4 0.932986 16 10393 chas 15.38 Gain 0 - 0 - Gain-- 72 NA NA NA "ChAS,IPN" 14q32.33 - - 0 - 0 - - - "155901(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 67 72 - 0 "155901(372|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400769SL female research_filter TAVH54072 14 106536991 106692891 155901 Gain 4 0.927491 16 10393 chas 15.38 Gain 0 - 0 - Gain-- 72 NA NA NA "ChAS,IPN" 14q32.33 - - 0 - 0 - - - "155901(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 67 72 - 0 "155901(372|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400948EV female research_filter GVAB34760 14 106536991 106692891 155901 Gain 4 0.947493 16 10393 chas 15.38 Gain 19.3 Gain 0 - GainGain- 72 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "155901(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 67 72 - 0 "155901(372|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400453LN male research_filter JWHR52164 14 106536991 106692891 155901 Gain 4 0.944757 16 10393 chas 15.38 Gain 19.3 Gain 0 - GainGain- 72 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "155901(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 67 72 - 0 "155901(372|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400984LD female research_filter KIIK22313 1 144307124 144462929 155806 Gain 3 0.885235 24 6774 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.1 50001(1|clone) "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "155806(8|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" 589(10|Matsuzaki(2009)) 68 1 - 0 "155806(64|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401496SL male - WUMM65746 2 98118199 98273958 155760 Gain 3 0.889442 76 2076 chas 55.63 Gain 93.51 Gain 0 - GainGain- 41 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,COX5B,ACTR1B" 3 "ANKRD36B,COX5B,ACTR1B" 3 - - - "155760(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008))" "1556(3|Conrad(2009),Perry(2008))" 91 41 - 0 "155760(92|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" UWAE35667 9 17506782 17662494 155713 Loss 1 0.92305 164 955 chas 98.83 Loss 97.36 Loss 97.36 Loss LossLossLoss 154 NA NA NA "ChAS,IPN,NXS,PTK" 9p22.2 - SH3GL2 1 SH3GL2 1 - - - "155713(8|Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 154 - 0 "155713(13|Conrad(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" OAGJ33866 6 95346421 95501763 155343 Loss 1 0.91227 116 1350 chas 100 Loss 99.6 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "155343(7|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" "205(2|Wang(2008),Bentley(2008))" - 114 - 0 "155343(34|Jakobsson(2008),Itsara(2009),Durbin(2010),Bentley(2008),Wang(2008),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" JYCC50302 5 46210339 46365514 155176 Loss 1 0.922841 34 4702 chas 53.68 Loss 100 Loss 60 Loss LossLossLoss 29 NA NA NA "ChAS,IPN,NXS,PTK" 5p11 - - 0 - 0 - - - "155176(21|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 29 - 0 "155176(79|Conrad(2009),Korbel(2007),Ju(2010),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" QKSF16477 5 46210339 46365514 155176 Loss 1 0.91512 34 4702 chas 0 - 91.25 Loss 95.54 Loss #NAME? 29 NA NA NA "ChAS,NXS,PTK" 5p11 - - 0 - 0 - - - "155176(21|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 29 - 0 "155176(79|Conrad(2009),Korbel(2007),Ju(2010),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401749DJ male "research_filter, clinical_filter" YKWT45889 16 70042730 70197754 155025 Gain 4 0.929646 18 9119 chas 0 - 0 - 0 - --- 47 29.83 Gain GTC ChAS 16q22.1 - "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 - - - "155025(37|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1187(4|Levy(2007),Matsuzaki(2009))" 91 47 - 0 "155025(154|Ju(2010),Korbel(2007),Redon(2006),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400094RS male - IWRE15730 16 70042730 70197754 155025 Loss 1 0.884588 18 9119 chas 0 - 0 - 0 - --- 47 NA NA NA ChAS 16q22.1 - "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 - - - "155025(37|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1187(4|Levy(2007),Matsuzaki(2009))" 91 47 - 0 "155025(154|Ju(2010),Korbel(2007),Redon(2006),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no NA 402054BD male - QBLX62038 16 70042730 70197754 155025 Loss 1 0.879794 18 9119 chas 0 - 0 - 0 - --- 47 NA NA NA ChAS 16q22.1 - "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 "MIR1972-2,MIR1972-1,PDPR,PDXDC2P" 4 - - - "155025(37|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009),Mills(2006))" "1187(4|Levy(2007),Matsuzaki(2009))" 91 47 - 0 "155025(154|Ju(2010),Korbel(2007),Redon(2006),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no NA 401681MS female - XMEG92101 9 138154270 138309279 155010 Gain 3 0.891451 88 1781 chas 40.39 Gain 39.34 Gain 0 - GainGain- 121 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "155010(42|Ju(2010),Korbel(2007),Bentley(2008),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Park(2010))" "2706(8|Levy(2007),Bentley(2008),McKernan(2009),Matsuzaki(2009),Mills(2006))" - 121 - 0 "155010(170|Ju(2010),Korbel(2007),Teague(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" UDNO19569 9 11901376 12056360 154985 Loss 1 0.927229 92 1703 chas 92.49 Loss 94.62 Loss 94.62 Loss LossLossLoss 139 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "154985(46|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 2 139 - 0 "154985(69|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),McCarroll(2006),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Campbell(2011),Redon(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401766MR male "research_filter, clinical_filter" KJKF45195 7 62623531 62778143 154613 Loss 1 0.871326 9 19326 chas 0 - 0 - 0 - --- 47 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "154613(21|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 93 47 - 0 "154613(38|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Sharp(2005),Altshuler(2010),Durbin(2010),Pinto(2007),Shaikh(2009),Pinto(2011),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401132CH male - OWBB95825 8 39230312 39384687 154376 Gain 3 0.8967 75 2086 chas 89.34 Gain 98.17 Gain 98.17 Gain GainGainGain 58 99.99 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "154376(34|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 58 - 0 "154376(287|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401275SJ male "research_filter, clinical_filter" FCXX78522 Y 22311731 22466070 154340 Loss 0 0.881148 10 17148 chas 0 - 0 - 0 - --- 7 0 - - ChAS Yq11.223 50001(1|clone) - 0 - 0 - "154340#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "154340(2|Levy(2007),Perry(2008))" 9(9|Levy(2007)) - 7 - 0 "154340(13|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_no algo_no affy6_no 401117GM male - TZAD89276 14 41825276 41979584 154309 Loss 1 0.907023 116 1341 chas 97.51 Loss 97.58 Loss 97.58 Loss LossLossLoss 104 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.1 - - 0 - 0 - - - "58922(7|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Matsuzaki(2009),McCarroll(2008),Park(2010))" - - 104 - 0 "154309(24|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401185LE female "research_filter, clinical_filter" FGSE34256 15 24350719 24504770 154052 Loss 1 0.871788 137 1132 chas 65.29 Loss 30.57 Loss 100 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "154052#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "154052(54|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 95 94 - 0 "154052(110|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Wang(2007),Itsara(2009),Pinto(2007),Durbin(2010),Pang(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Ju(2010),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" NOIN63241 15 24350719 24504770 154052 Loss 1 0.886789 137 1132 chas 75.14 Loss 55.86 Loss 99.64 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "154052#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "154052(54|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 95 94 - 0 "154052(110|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Wang(2007),Itsara(2009),Pinto(2007),Durbin(2010),Pang(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Ju(2010),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400641WJ female "research_filter, clinical_filter" ZSEZ81141 15 24350856 24504770 153915 Loss 1 0.894234 136 1140 chas 100 Loss 86.74 Loss 100 Loss LossLossLoss 94 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "153915#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "153915(54|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 95 94 - 0 "153915(110|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Wang(2007),Itsara(2009),Pinto(2007),Durbin(2010),Pang(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Ju(2010),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" RTCT86718 Y 27648476 27802256 153781 Gain 2 0.855214 187 826 chas 92.8 Gain 0 - 0 - Gain-- 52 NA NA NA "ChAS,IPN" Yq11.23 - "CDY1B,CDY1" 2 "CDY1B,CDY1" 2 - "153781#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "153781(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 99 52 - 0 "153781(8|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" VLMR80827 16 14900183 15053870 153688 Gain 3 0.883765 76 2049 chas 4.38 Gain 29.93 Gain 0 - GainGain- 35 100 Gain "BS,GTC" "ChAS,IPN,NXS" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,ABCC6P2,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 9 "NPIP,NOMO1,MIR3179-2,MIR3179-3,ABCC6P2,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 9 - - "78680(5|Kidd(2008),Tuzun(2005))" "152702(30|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 97 34 - 0 "153688(119|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401630MK female "research_filter, clinical_filter" TMXA54308 9 138139989 138293641 153653 Gain 3 0.907844 90 1726 chas 10.51 Gain 89.68 Gain 0 - GainGain- 120 NA NA NA "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "153653(43|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2007),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Perry(2008),Itsara(2009),Levy(2007),Altshuler(2010),Park(2010))" "2844(8|Levy(2007),Bentley(2008),McKernan(2009),Matsuzaki(2009),Mills(2006))" - 120 - 0 "153653(173|Ju(2010),Korbel(2007),Conrad(2009),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Teague(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Mills(2006),Wang(2007),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" NLWZ33045 17 36243781 36397279 153499 Gain 3 0.904328 29 5482 chas 0 - 64.87 Gain 0 - -Gain- 5 NA NA NA "ChAS,NXS" 17q12 - "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 "LOC284100,TBC1D3,LOC440434,TBC1D3F" 4 - - 53273(1|Kidd(2008)) "153499(21|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 5 - 0 "153499(197|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401993HM female research_filter XUMQ23395 10 46989207 47142216 153010 Loss 1 0.85973 192 801 chas 0 - 0 - 0 - --- 143 NA NA NA ChAS 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "153010(36|Sebat(2004),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 143 - 0 "153010(254|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401875FG male clinical_filter ORXH15927 10 45215162 45367803 152642 Gain 3 0.902659 112 1375 chas 93.21 Gain 85.48 Gain 96.32 Gain GainGainGain 118 92.64 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "152642(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "152642(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" WMBQ46007 1 147731329 147883764 152436 Gain 3 0.899694 66 2345 chas 72.45 Gain 98.76 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 1q21.2 - - 0 - 0 - "6172#2%""1q21.1 recurrent microdeletion (susceptility locus for neurodevelopmental disorders)"":1224571,""1q21.1 recurrent microduplication (possible susceptiblity locus for neurodevelopmental disorders)"":1224571" "61836(2|Kidd(2008),Ahn(2009))" "152436(15|Conrad(2009),Redon(2006),Perry(2008),Pinto(2007),Park(2010),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" - 93 59 - 0 "152436(46|Teague(2010),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Wong(2007),Perry(2008b),Pinto(2011),Park(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" PRED73338 X 148875828 149028111 152284 Gain 3 0.899767 348 438 chas 33.45 Gain 0 - 0 - Gain-- 66 NA NA NA "ChAS,IPN" Xq28 50001(1|clone) MAGEA8 1 MAGEA8 1 - - - "152284(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McCarroll(2008),Shaikh(2009))" - 1 66 - 0 "152284(13|Wang(2007),Conrad(2009),Durbin(2010),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" ZQHJ50767 11 55908699 56060529 151831 Loss 1 0.921654 148 1032 chas 93.49 "Gain,Loss" 100 "Gain,Loss" 100 "Gain,Loss" "Gain,LossGain,LossGain,Loss" 76 93.43 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q12.1 - "OR5J2,OR8H1,OR5T1,OR5T3,OR5T2,OR8K5" 6 "OR5J2,OR8H1,OR5T1,OR5T3,OR5T2,OR8K5" 6 - - - "32017(18|Matsuzaki(2009),Shaikh(2009))" "1495(9|Levy(2007),Matsuzaki(2009))" - 75 - 0 "151831(10|Itsara(2009),Levy(2007),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" GWRR97762 12 76043062 76194445 151384 Gain 3 0.909719 146 1044 chas 92.65 Gain 95.95 Gain 99.11 Gain GainGainGain 140 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.2 - - 0 - 0 - - - - - - 140 - 0 57895(1|Wong(2007)) TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" ZVON68408 14 22793130 22944507 151378 Loss 1 0.858002 212 717 chas 0 - 0 - 0 - --- 110 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "151378(22|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 110 - 0 "151378(101|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400688FL female clinical_filter WKJP80388 7 142342271 142493638 151368 Gain 3 0.883501 124 1230 chas 7.4 Gain 12.54 Gain 19.16 Gain GainGainGain 128 0 - - "ChAS,IPN,NXS,PTK" 7q34 - "PRSS1,TRY6,PRSS2,MTRNR2L6" 4 "PRSS1,TRY6,PRSS2,MTRNR2L6" 4 "PRSS1,PRSS2" - - "151368(16|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" "383(2|Wheeler(2008),Bentley(2008))" 76 127 - 0 "151368(66|Wang(2007),Wong(2007),Perry(2008),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_no 400320RN male "research_filter, clinical_filter" MLUO94199 7 142342271 142493638 151368 Gain 3 0.876431 124 1230 chas 0 - 11.57 Gain 0 - -Gain- 128 0 - - "ChAS,NXS" 7q34 - "PRSS1,TRY6,PRSS2,MTRNR2L6" 4 "PRSS1,TRY6,PRSS2,MTRNR2L6" 4 "PRSS1,PRSS2" - - "151368(16|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" "383(2|Wheeler(2008),Bentley(2008))" 76 127 - 0 "151368(66|Wang(2007),Wong(2007),Perry(2008),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_no 400508RD male "research_filter, clinical_filter" USUN51593 14 106072251 106223587 151337 Loss 1 0.886662 24 6579 chas 0 - 19.99 Loss 62.97 Loss #NAME? 28 62.92 Loss GTC "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - "40731(3|Kidd(2008),Ahn(2009))" "151337(73|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4117(14|Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 28 - 0 "151337(366|Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Wheeler(2008),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400199SA_1 male research_filter ORXL21407 14 87064576 87215564 150989 Gain 3 0.894815 88 1735 chas 74.89 Gain 95.71 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 14q31.3 - - 0 - 0 - - - - - - 78 - 0 "150989(10|Pinto(2011),Wong(2007),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402064DC male "research_filter, clinical_filter" JTMA20495 10 45195185 45345776 150592 Gain 3 0.896424 113 1344 chas 87.44 Gain 86.77 Gain 100 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "150592(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "150592(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" MFZY15027 16 72214613 72365096 150484 Loss 1 0.92227 92 1653 chas 92.48 Loss 96.96 "Gain,Loss" 96.97 "Gain,Loss" "LossGain,LossGain,Loss" 103 NA NA NA "ChAS,IPN,NXS,PTK" 16q22.2 - - 0 - 0 - - - "7032(3|Pang(2010),Conrad(2009),Matsuzaki(2009))" 1157(2|Matsuzaki(2009)) 1 103 - 0 "150484(12|Conrad(2009),Redon(2006),Durbin(2010),Pang(2010),Kidd(2008),Perry(2008b),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" EFCN47469 10 38750290 38900673 150384 Loss 0 0.976416 8 21483 chas 100 Loss 0 - 0 - Loss-- 6 0 - - "ChAS,IPN" 10p11.1 50001(1|clone) - 0 - 0 - - - "150384(17|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009))" "1779(3|Levy(2007),Ahn(2009))" 23 6 - 0 "150384(47|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Perry(2008b),Pinto(2011),Teague(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400483DP male research_filter DSDE67128 10 38750290 38900673 150384 Loss 0 0.965152 8 21483 chas 100 Loss 0 - 0 - Loss-- 6 NA NA NA "ChAS,IPN" 10p11.1 50001(1|clone) - 0 - 0 - - - "150384(17|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009))" "1779(3|Levy(2007),Ahn(2009))" 23 6 - 0 "150384(47|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Perry(2008b),Pinto(2011),Teague(2010))" FALSE TRUE ipn_yes algo_yes NA 401125LM female research_filter UBKP24592 10 38750290 38900673 150384 Loss 0 0.970232 8 21483 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p11.1 50001(1|clone) - 0 - 0 - - - "150384(17|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Ju(2010),Levy(2007),McKernan(2009))" "1779(3|Levy(2007),Ahn(2009))" 23 6 - 0 "150384(47|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Perry(2008b),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401513KC male - ATJL19217 7 108506322 108656534 150213 Gain 3 0.907957 92 1650 chas 67.36 Gain 98.16 Gain 0 - GainGain- 103 NA NA NA "ChAS,IPN,NXS" 7q31.1 - C7orf66 1 C7orf66 1 - - - "60965(4|Park(2010),McKernan(2009),McCarroll(2008),Redon(2006))" - - 103 - 0 "86323(9|Park(2010),McKernan(2009),McCarroll(2008),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401608GE female "research_filter, clinical_filter" WDRZ91881 20 9736493 9886643 150151 Gain 3 0.904532 148 1021 chas 98.42 Gain 100 Gain 99.28 Gain GainGainGain 133 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.2 - PAK7 1 PAK7 1 - - - - - - 133 PAK7#asd_candidate 1 "16648(7|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401426WD male "research_filter, clinical_filter" VXMJ58338 12 7973990 8124048 150059 Gain 3 0.894497 106 1429 chas 79.76 Gain 77.71 Gain 82.8 Gain GainGainGain 66 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 24644(2|Kidd(2008)) "150059(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 66 - 0 "150059(164|Wang(2007),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" YBGD61325 20 982733 1132723 149991 Gain 3 0.892414 120 1260 chas 90.25 Gain 97.32 Gain 97.83 Gain GainGainGain 101 96.35 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p13 - "PSMF1,RSPO4" 2 "PSMF1,RSPO4" 2 RSPO4 - - "7910(3|Conrad(2009),McKernan(2009),Matsuzaki(2009))" "386(3|Levy(2007),Mills(2006))" - 101 - 0 "87132(18|Conrad(2009),McKernan(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400543CK male "research_filter, clinical_filter" DOIH36842 X 22856962 23006946 149985 Loss 0 0.959064 108 1401 chas 100 Loss 0 - 0 - Loss-- 129 NA NA NA "ChAS,IPN" Xp22.11 - - 0 - 0 - - - "126049(2|Wheeler(2008),Redon(2006))" 1(1|Levy(2007)) - 129 - 0 "149985(15|Redon(2006),Jakobsson(2008),Durbin(2010),Shaikh(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" YCLA52151 7 89557232 89707146 149915 Loss 1 0.903564 144 1048 chas 100 Loss 100 Loss 100 Loss LossLossLoss 135 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q21.13 - - 0 - 0 - - - "149915(13|Redon(2006),Matsuzaki(2009),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007))" "794(8|Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 134 - 0 "149915(39|Ahn(2009),Wong(2007),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400173KP female "research_filter, clinical_filter" IJLN67055 13 23134875 23284470 149596 Loss 1 0.930568 131 1150 chas 96.9 Loss 99.88 Loss 98.33 Loss LossLossLoss 118 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.11 - - 0 - 0 - - - "149596(2|McKernan(2009),Simon-Sanchez(2007))" 925(1|McKernan(2009)) - 118 - 0 "149596(14|Itsara(2009),Shaikh(2009),McKernan(2009),Durbin(2010),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400982BS female "research_filter, clinical_filter" FPEA56091 14 22790830 22940138 149309 Loss 1 0.849401 200 750 chas 0 - 0 - 0 - --- 99 0 - - ChAS 14q11.2 - - 0 - 0 - - - "149309(21|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 99 - 0 "149309(97|Sebat(2004),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400075MR male clinical_filter ZCOM63077 7 102138955 102288202 149248 Loss 1 0.909779 10 16583 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 7q22.1 - "UPK3BL,SPDYE2,SPDYE2L,RASA4,POLR2J2,POLR2J3" 6 "UPK3BL,SPDYE2,SPDYE2L,RASA4,POLR2J2,POLR2J3" 6 - - - "149248(22|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Kidd(2008),Cooper(2008),Tuzun(2005))" 339(1|Wheeler(2008)) 100 4 - 0 "149248(145|Conrad(2009),Ahn(2009),Wong(2007),Perry(2008),Kidd(2010b),Alkan(2009),Locke(2006),Schuster(2010),Durbin(2010),Kidd(2008),Korbel(2007),Cooper(2008),Tuzun(2005),Perry(2008b),Pinto(2011),Sharp(2005),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401936BA male - CAYM40684 20 9737456 9886643 149188 Gain 3 0.904767 145 1036 chas 90.95 Gain 98.21 Gain 98.21 Gain GainGainGain 130 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.2 - PAK7 1 PAK7 1 - - - - - - 130 PAK7#asd_candidate 1 "16648(7|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" HEJH85210 3 35800767 35949450 148684 Gain 3 0.903463 96 1565 chas 92.51 Gain 96.05 Gain 0 - GainGain- 88 NA NA NA "ChAS,IPN,NXS" 3p22.3 - ARPP21 1 ARPP21 1 - - - "148684(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 88 - 0 "148684(16|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" IJCV29609 12 112173196 112321871 148676 Gain 3 0.888134 139 1077 chas 88.84 Gain 56.83 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" "12q24.13,12q24.12" - "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 ALDH2 - - 1090(1|Ahn(2009)) - - 56 - 0 "133484(15|Ahn(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" IDTW13637 10 17927541 18075960 148420 Loss 1 0.873198 23 6746 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236" 2 "MRC1,TMEM236" 2 - - - 5016(1|Conrad(2009)) - 66 10 - 0 "148420(8|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401687LR male - QMDZ51984 15 93791496 93939901 148406 Gain 3 0.912668 116 1290 chas 97.14 Gain 98.56 Gain 94.89 Gain GainGainGain 184 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.1 - - 0 - 0 - - - "116257(13|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McKernan(2009),Gusev(2009),McCarroll(2008),Shaikh(2009))" 1567(2|Conrad(2009)) - 184 - 0 "121264(22|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),McCarroll(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401979TB male "research_filter, clinical_filter" MUIH56067 12 7975694 8124048 148355 Gain 3 0.880792 100 1498 chas 78.92 Gain 61.89 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 22940(2|Kidd(2008)) "148355(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 65 - 0 "148355(164|Wang(2007),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" QRNV11451 12 7975694 8124048 148355 Gain 3 0.890966 100 1498 chas 80.67 Gain 74.32 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 22940(2|Kidd(2008)) "148355(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 65 - 0 "148355(164|Wang(2007),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" KAYE11117 12 7975694 8124048 148355 Gain 3 0.887772 100 1498 chas 80.67 Gain 83.75 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 22940(2|Kidd(2008)) "148355(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 65 - 0 "148355(164|Wang(2007),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400686BM male "research_filter, clinical_filter" MLUO94199 X 6449837 6598136 148300 Gain 2 0.931207 283 525 chas 93.42 Gain 0 - 0 - Gain-- 110 93.41 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - VCX3A 1 VCX3A 1 - "148300#1%""Steroid sulphatase deficiency (STS)"":1725741" - "148300(16|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 4 110 - 0 "148300(17|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" PZCO50940 14 39660738 39808953 148216 Gain 3 0.89086 167 892 chas 97.52 Gain 97.71 Gain 100 Gain GainGainGain 72 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.1 - "LOC100288846,CTAGE5,MIA2" 3 "LOC100288846,CTAGE5,MIA2" 3 - - - "32169(4|Matsuzaki(2009),Mills(2006))" 333(1|Wheeler(2008)) 1 72 - 0 "47722(8|Kidd(2008),Levy(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" APCZ69205 X 38486619 38634614 147996 Gain 3 0.903905 257 578 chas 91.23 Gain 0 - 0 - Gain-- 137 100 Gain "BS,GTC" "ChAS,IPN" Xp11.4 - TSPAN7 1 TSPAN7 1 TSPAN7 - - "81785(7|Conrad(2009),Ahn(2009),Matsuzaki(2009),Kidd(2008),Tuzun(2005),Kim(2009),Zogopoulos(2007))" "1231(5|Matsuzaki(2009),Perry(2008))" - 137 TSPAN7#id_known 1 "143771(16|Teague(2010),Ahn(2009),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Conrad(2009),Tuzun(2005),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400970VE female "research_filter, clinical_filter" PTKC28903 X 38486800 38634614 147815 Gain 3 0.898759 256 579 chas 96.5 Gain 0 - 0 - Gain-- 135 NA NA NA "ChAS,IPN" Xp11.4 - TSPAN7 1 TSPAN7 1 TSPAN7 - - "81785(7|Conrad(2009),Ahn(2009),Matsuzaki(2009),Kidd(2008),Tuzun(2005),Kim(2009),Zogopoulos(2007))" "1231(5|Matsuzaki(2009),Perry(2008))" - 135 TSPAN7#id_known 1 "143771(16|Teague(2010),Ahn(2009),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Conrad(2009),Tuzun(2005),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400442FE female "research_filter, clinical_filter" GHAL32977 12 7976388 8124048 147661 Gain 3 0.892405 99 1506 chas 69.9 Gain 83.44 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - 22246(2|Kidd(2008)) "147661(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 65 - 0 "147661(164|Wang(2007),Redon(2006),Conrad(2009),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" MWKR26526 5 131067380 131214852 147473 Loss 1 0.914857 92 1620 chas 94.28 Loss 96.98 Loss 97.14 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 5q31.1 - FNIP1 1 FNIP1 1 - - - 1416(1|McKernan(2009)) "185(2|Pang(2010),Wheeler(2008))" - 55 - 0 "64652(8|Pang(2010),Levy(2007),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400225CJ male "research_filter, clinical_filter" NSQR79941 10 135252898 135400250 147353 Gain 3 0.896927 236 627 chas 84.41 Gain 80.23 Gain 92.21 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 - - - "147353(69|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 12 118 - 0 "147353(150|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401077VC female "research_filter, clinical_filter" ZXNE12672 2 117777535 117924658 147124 Gain 4 0.952894 72 2072 chas 100 Gain 100 Gain 100 Gain GainGainGain 71 99.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400070PC female "research_filter, clinical_filter" VWRZ18168 2 117777535 117924658 147124 Gain 3 0.910799 72 2072 chas 94.6 Gain 100 Gain 0 - GainGain- 71 94.54 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400890IT male "research_filter, clinical_filter" GFOF72186 2 117777535 117924658 147124 Gain 3 0.90832 72 2072 chas 91.78 Gain 99.96 Gain 0 - GainGain- 71 97.52 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" CVYW15790 2 117777535 117924658 147124 Gain 3 0.900355 72 2072 chas 80.45 Gain 81.68 Gain 0 - GainGain- 71 NA NA NA "ChAS,IPN,NXS" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" FDGT59945 2 117777535 117924658 147124 Gain 3 0.908795 72 2072 chas 91.78 Gain 98.54 Gain 98.54 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401475MK male "research_filter, clinical_filter" CBBY76424 2 117777535 117924658 147124 Gain 3 0.902225 72 2072 chas 86.17 Gain 94.29 Gain 0 - GainGain- 71 NA NA NA "ChAS,IPN,NXS" 2q14.1 - - 0 - 0 - - 4275(1|Korbel(2007)) "147124(12|Conrad(2009),Matsuzaki(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" "865(3|Wang(2008),Wheeler(2008),Ahn(2009))" - 71 - 0 "116358(37|Conrad(2009),Ahn(2009),Korbel(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401927SK female "research_filter, clinical_filter" MWKR26526 10 17889808 18036656 146849 Loss 1 0.905152 16 9789 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - 1921(1|de Smith(2007)) - 66 9 - 0 "134250(7|Teague(2010),De(Smith_2007),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400225CJ male - DUXB26784 10 17889808 18036656 146849 Loss 1 0.886089 16 9789 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - 1921(1|de Smith(2007)) - 66 9 - 0 "134250(7|Teague(2010),De(Smith_2007),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401519SA female - NNNK99860 X 58318310 58465151 146842 Loss 1 0.91344 26 5873 chas 0 - 0 - 0 - --- 21 NA NA NA ChAS Xp11.1 - - 0 - 0 - - - "146842(5|McCarroll(2005),Wang(2007),Matsuzaki(2009))" 173(1|Levy(2007)) - 20 - 0 "32235(5|Wang(2007),Levy(2007),McCarroll(2006),Durbin(2010))" TRUE TRUE ipn_no algo_no NA 400439IM female clinical_filter VLMR80827 3 4166685 4313485 146801 Loss 1 0.935992 95 1561 chas 99.8 Loss 94.11 Loss 94.11 Loss LossLossLoss 102 95.13 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "146801(26|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "807(3|Levy(2007),Perry(2008))" - 102 - 0 "146801(39|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401630MK female "research_filter, clinical_filter" TRLD69151 3 197458811 197605588 146778 Loss 1 0.928052 148 998 chas 90.28 Loss 95.13 Loss 95.13 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 3q29 - "KIAA0226,FYTTD1,LRCH3" 3 "KIAA0226,FYTTD1,LRCH3" 3 - "39059#2%""3q29 microdeletion syndrome"":1825641,""3q29 microduplication syndrome"":1825641" - "130149(3|Conrad(2009),McKernan(2009),Pinto(2007))" "1585(4|Conrad(2009),Levy(2007),Perry(2008),Ju(2010))" 2 69 - 0 "146778(28|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Perry(2008b),Pinto(2011),Ju(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401514BA male "research_filter, clinical_filter" SKLJ58672 10 45210690 45357442 146753 Gain 3 0.914591 114 1298 chas 98.18 Gain 99.74 Gain 99.74 Gain GainGainGain 118 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "146753(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "146753(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" LCAJ69904 10 45210690 45357442 146753 Gain 3 0.8985 114 1298 chas 100 Gain 100 Gain 100 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "146753(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "146753(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401595BL female "research_filter, clinical_filter" AWAR79338 10 45210690 45357414 146725 Gain 3 0.902566 113 1310 chas 98.2 Gain 100 Gain 100 Gain GainGainGain 118 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "146725(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "146725(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" GVYY53861 10 45210690 45357414 146725 Gain 3 0.91261 113 1310 chas 89.74 Gain 99.74 Gain 100 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "146725(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 118 - 0 "146725(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401214BJ male "research_filter, clinical_filter" AXFF10000 21 24492713 24639393 146681 Loss 1 0.909662 104 1424 chas 100 Loss 100 Loss 100 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 21q21.2 - - 0 - 0 - - - "146681(4|de Smith(2007),McKernan(2009),Redon(2006),Shaikh(2009))" "735(2|Park(2010),Bentley(2008))" - 115 - 0 "146681(18|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Redon(2006),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400272AE male "research_filter, clinical_filter" APOV19283 2 116532361 116679009 146649 Gain 3 0.897356 108 1370 chas 92.94 Gain 97.12 Gain 0 - GainGain- 112 NA NA NA "ChAS,IPN,NXS" 2q14.1 - DPP10 1 DPP10 1 - - - "146649(5|Park(2010),Pinto(2007),Redon(2006),Perry(2008))" "749(12|Conrad(2009),Conrad(2005),Matsuzaki(2009),Ju(2010),Pang(2010),Park(2010),Kim(2009))" - 112 DPP10#asd_candidate 1 "146649(43|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Conrad(2006),Durbin(2010),Pang(2010),Pinto(2011),Pinto(2007),Park(2010),Kim(2009))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" LNYN65073 18 62109238 62255693 146456 Gain 3 0.911695 90 1645 chas 94.38 Gain 90.76 Gain 100 Gain GainGainGain 91 94.52 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - 3970(1|Ahn(2009)) "58993(5|Wang(2007),McKernan(2009),Simon-Sanchez(2007),Conrad(2009))" 2(2|Levy(2007)) - 91 - 0 "146456(51|Conrad(2009),Ahn(2009),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Pinto(2011),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401924ST male "research_filter, clinical_filter" JTJC66263 7 7352481 7498546 146066 Gain 3 0.90043 176 834 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 180 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.3 - COL28A1 1 COL28A1 1 - - - "146066(7|Conrad(2009),Redon(2006),Conrad(2005),Matsuzaki(2009),Pinto(2007),McCarroll(2005))" - - 179 - 0 "141421(12|Conrad(2009),Redon(2006),Itsara(2009),Conrad(2006),Durbin(2010),Pinto(2007),Locke(2006),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" MRIL85955 4 33621068 33767032 145965 Loss 1 0.907535 83 1780 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 78 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - 10318(1|Pang(2010)) - - 78 - 0 "119083(9|Pang(2010),Pinto(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400705KK male "research_filter, clinical_filter" ORXH15927 10 35169895 35315646 145752 Gain 3 0.899819 106 1388 chas 99.64 Gain 99.68 Gain 0 - GainGain- 85 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 10p11.21 - CUL2 1 CUL2 1 - - - "145752(5|Jakobsson(2008),Shaikh(2009))" - - 85 - 0 "145752(15|Teague(2010),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" WFIZ12719 7 64133709 64279274 145566 Loss 1 0.899992 103 1427 chas 76.9 Loss 97.28 Loss 97.29 Loss LossLossLoss 63 96.94 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.21 - "ZNF138,ZNF107" 2 "ZNF138,ZNF107" 2 - - - "145566(2|Conrad(2009),Simon-Sanchez(2007))" 192(1|de Smith(2007)) 1 62 - 0 "145566(14|Itsara(2009),Conrad(2009),Durbin(2010),Simon-Sanchez(2007),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400793BR male "research_filter, clinical_filter" WQLF68770 1 248683392 248828847 145456 Gain 3 0.90498 74 1992 chas 24.75 Gain 42.06 Gain 42.28 Gain GainGainGain 68 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2G6,OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 7 "OR2G6,OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 7 - - "145456(2|Kidd(2008),Ahn(2009))" "145456(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" "4123(9|Young(2008),Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 64 68 - 0 "145456(92|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401437MJ male "research_filter, clinical_filter" LRBG51365 5 676464 821699 145236 Loss 1 0.924228 12 13203 chas 0 - 4.32 Loss 0 - -Loss- 70 NA NA NA "ChAS,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "145236#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "145236(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 95 70 TPPP#asd_candidate 1 "145236(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400886MP female research_filter EATF12348 16 7052774 7198005 145232 Loss 1 0.908972 444 327 chas 93.39 Loss 87.37 Loss 91.02 Loss LossLossLoss 202 NA NA NA "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 RBFOX1 1 - - - "32496(9|Wang(2007),Redon(2006),Perry(2008),McKernan(2009),Pinto(2007),Park(2010),Zogopoulos(2007))" 567(1|McKernan(2009)) - 202 - 0 "122538(36|Wang(2007),Redon(2006),Perry(2008),Kidd(2008),Itsara(2009),Banerjee(2011),McKernan(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400352CA female "research_filter, clinical_filter" APCZ69205 1 248688587 248833756 145170 Gain 3 0.910869 68 2166 chas 24.25 Gain 29.09 Gain 0 - GainGain- 61 74.83 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1q44 - "OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 6 "OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 6 - - "141955(2|Kidd(2008),Ahn(2009))" "145170(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" "3172(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 67 60 - 0 "145170(89|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400970VE female "research_filter, clinical_filter" VPFM57168 10 35170560 35315646 145087 Gain 3 0.89268 102 1436 chas 100 Gain 100 Gain 100 Gain GainGainGain 84 NA NA NA "ChAS,IPN,NXS,PTK" 10p11.21 - CUL2 1 CUL2 1 - - - "145087(5|Jakobsson(2008),Shaikh(2009))" - - 84 - 0 "145087(14|Teague(2010),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401696CG male "research_filter, clinical_filter" IFQR85921 2 186960817 187105825 145009 Loss 1 0.906636 94 1559 chas 84.46 Loss 92.92 Loss 100 Loss LossLossLoss 83 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q32.1 - - 0 - 0 - - - - 118(1|de Smith(2007)) - 83 - 0 "26631(6|De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400835FD female "research_filter, clinical_filter" BWEV96807 X 10871959 11016950 144992 Gain 3 0.984864 77 1907 chas 100 Gain 0 - 0 - Gain-- 79 NA NA NA "ChAS,IPN" Xp22.2 - - 0 - 0 - - - - - - 79 - 0 2450(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 402012RR male "research_filter, clinical_filter" WPKS46597 5 676847 821699 144853 Gain 4 0.964912 9 18106 chas 1.3 Gain 47.69 Gain 47.69 Gain GainGainGain 70 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144853#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144853(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 70 TPPP#asd_candidate 1 "144853(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400732MA female research_filter RIAA15120 5 676847 821699 144853 Loss 1 0.935277 9 18106 chas 0 - 62.77 Loss 62.77 Loss #NAME? 70 NA NA NA "ChAS,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144853#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144853(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 70 TPPP#asd_candidate 1 "144853(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401315HK female research_filter RCQQ88896 5 676873 821699 144827 Loss 1 0.923826 8 20689 chas 1.3 Loss 4.33 Loss 0 - LossLoss- 69 2.66 Loss IP6 "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male research_filter KZTP77176 5 676873 821699 144827 Loss 1 0.933782 8 20689 chas 1.3 Loss 4.33 Loss 0 - LossLoss- 69 0 - - "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 401491BB male research_filter YKLI59783 5 676873 821699 144827 Loss 1 0.929201 8 20689 chas 1.3 Loss 31.05 Loss 0 - LossLoss- 69 2.66 Loss IP6 "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401919MD male research_filter RSYQ67471 5 676873 821699 144827 Loss 1 0.931075 8 20689 chas 1.3 Loss 47.7 Loss 47.7 Loss LossLossLoss 69 41.91 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400624RJ male research_filter IJCH39724 5 676873 821699 144827 Loss 1 0.923598 8 20689 chas 1.3 Loss 3.42 Loss 0 - LossLoss- 69 NA NA NA "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401571SD male research_filter JITZ20982 5 676873 821699 144827 Gain 4 0.951407 8 20689 chas 1.3 Gain 63.96 Gain 47.7 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401180GR male research_filter NFGH10073 5 676873 821699 144827 Gain 4 0.969882 8 20689 chas 1.3 Gain 3.42 Gain 19.69 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400553PP male research_filter VDRD32700 5 676873 821699 144827 Loss 1 0.928472 8 20689 chas 1.3 Loss 58.49 Loss 65.32 Loss LossLossLoss 69 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400271SR male research_filter XROV61149 5 676873 821699 144827 Loss 1 0.928196 8 20689 chas 1.3 Loss 31.05 Loss 0 - LossLoss- 69 NA NA NA "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401480PG male research_filter FSLR52955 5 676873 821699 144827 Gain 4 0.966264 8 20689 chas 1.3 Gain 66.79 Gain 19.69 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400987FB male research_filter XCWR96625 5 676873 821699 144827 Loss 1 0.934332 8 20689 chas 1.3 Loss 5.03 Loss 0 - LossLoss- 69 NA NA NA "ChAS,IPN,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400158FB male research_filter XBAT84080 5 676873 821699 144827 Loss 1 0.93142 8 20689 chas 0 - 3.42 Loss 0 - -Loss- 69 32.57 "Gain,Loss" IP6 "ChAS,NXS" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400186WC female research_filter ZEGT44347 5 676873 821699 144827 Gain 4 0.964801 8 20689 chas 0 - 100 Gain 100 Gain #NAME? 69 NA NA NA "ChAS,NXS,PTK" 5p15.33 - "TPPP,ZDHHC11" 2 "TPPP,ZDHHC11" 2 - "144827#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "144827(51|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2708(9|Levy(2007),Ahn(2009),Matsuzaki(2009),Mills(2006))" 96 69 TPPP#asd_candidate 1 "144827(252|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Perry(2008b),Sebat(2004),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401609MB female research_filter UJRA83281 8 10300915 10445702 144788 Loss 1 0.923422 120 1216 chas 94.77 Loss 97.34 Loss 97.34 Loss LossLossLoss 123 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.1 - PRSS55 1 PRSS55 1 - "144788#1%""8p23.1 deletion syndrome"":3646425" 144788(16|Kidd(2008)) - - 2 123 - 0 "46273(5|Itsara(2009),Wang(2007),Durbin(2010),Shaikh(2009),Banerjee(2011))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" DHFF12670 9 30420466 30564985 144520 Loss 1 0.912391 84 1741 chas 99.3 Loss 99.65 Loss 99.65 Loss LossLossLoss 90 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - "144520(6|Pinto(2007),Shaikh(2009))" "979(8|Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Wheeler(2008),Mills(2006))" - 90 - 0 "144520(33|Ahn(2009),Wong(2007),Redon(2006),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401252AE male "research_filter, clinical_filter" MKJI51363 6 162745745 162890201 144457 Loss 1 0.941909 167 870 chas 99.56 Loss 99.79 Loss 99.79 Loss LossLossLoss 121 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 PARK2 1 PARK2 - - "144457(13|Jakobsson(2008),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" "1942(3|McKernan(2009),Perry(2008),Bentley(2008))" - 121 PARK2#asd_candidate 1 "144457(38|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2007),Shaikh(2009),Redon(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" RIAA15120 X 57759303 57903735 144433 Gain 3 0.881822 64 2292 chas 53.43 Gain 0 - 0 - Gain-- 62 NA NA NA "ChAS,IPN" Xp11.21 - - 0 - 0 - - - - 69(1|Pang(2010)) - 62 - 0 "144433(8|Pang(2010),Kidd(2008),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" GFOF72186 7 2113671 2258103 144433 Loss 1 0.930073 160 908 chas 99.99 Loss 99.99 Loss 100 Loss LossLossLoss 98 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p22.3 - MAD1L1 1 MAD1L1 1 MAD1L1 - - "62942(2|Itsara(2009),Matsuzaki(2009))" "273(2|Levy(2007),Bentley(2008))" - 98 - 0 "144433(40|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" OPOQ31165 2 98017407 98161697 144291 Loss 1 0.900917 26 5771 chas 96.15 Loss 4.78 Loss 0 - LossLoss- 20 20.23 Loss "BS,GTC" "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "144291(18|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),McCarroll(2008),Jakobsson(2008),Ju(2010),Shaikh(2009))" "1425(3|Conrad(2009),Perry(2008))" 94 20 - 0 "144291(64|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" JUSU56143 10 135252179 135396272 144094 Gain 3 0.892974 236 613 chas 56.84 Gain 73.23 Gain 77.21 Gain GainGainGain 119 86.82 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 - - - "144094(69|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 12 118 - 0 "144094(150|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" MUBF17546 10 135252179 135396272 144094 Gain 3 0.894385 236 613 chas 82.14 Gain 73.06 Gain 89.18 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 "SYCE1,LOC619207,SPRNP1,CYP2E1" 4 - - - "144094(69|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 12 118 - 0 "144094(150|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400540BM male "research_filter, clinical_filter" JYCC50302 5 45954457 46098523 144067 Loss 1 0.863276 44 3350 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS 5p12 - - 0 - 0 - - - "104215(20|Wang(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),Conrad(2009),Shaikh(2009))" - - 19 - 0 "144067(57|Conrad(2009),Ju(2010),Wang(2007),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401778CB male clinical_filter QAGW25123 X 148884729 149028747 144019 Gain 3 0.905489 348 415 chas 97.95 Gain 0 - 0 - Gain-- 66 100 Gain GTC "ChAS,IPN" Xq28 50001(1|clone) MAGEA8 1 MAGEA8 1 - - - "144019(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McCarroll(2008),Shaikh(2009))" - - 66 - 0 "144019(13|Wang(2007),Conrad(2009),Durbin(2010),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" BDAF16773 X 148884729 149028747 144019 Gain 3 0.89016 348 415 chas 80.19 Gain 0 - 0 - Gain-- 66 0 - - "ChAS,IPN" Xq28 50001(1|clone) MAGEA8 1 MAGEA8 1 - - - "144019(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McCarroll(2008),Shaikh(2009))" - - 66 - 0 "144019(13|Wang(2007),Conrad(2009),Durbin(2010),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400811SK female "research_filter, clinical_filter" DZXX36994 3 22111545 22255478 143934 Loss 1 0.909427 96 1515 chas 100 Loss 100 Loss 100 Loss LossLossLoss 121 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.3 - - 0 - 0 - - - "105296(3|Pinto(2007),Shaikh(2009))" - - 121 - 0 "143934(18|Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Perry(2008b),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401005BL female "research_filter, clinical_filter" ROCO41006 15 55799916 55943713 143798 Gain 3 0.891297 128 1132 chas 94.58 Gain 91.84 Gain 100 Gain GainGainGain 96 NA NA NA "ChAS,IPN,NXS,PTK" 15q21.3 - "DYX1C1,PYGO1,PRTG" 3 "DYX1C1,PYGO1,PRTG" 3 DYX1C1 - - 9745(1|Wang(2007)) 278(1|Mills(2006)) - 96 - 0 "111163(11|Itsara(2009),Wang(2007),Wong(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" TUOI10912 10 135233544 135377265 143722 Gain 3 0.901761 239 603 chas 73.95 Gain 90.19 Gain 96.58 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143722(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 12 118 - 0 "143722(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" WVAB12930 X 148884729 149028332 143604 Gain 3 0.884397 346 416 chas 85.47 Gain 0 - 0 - Gain-- 65 100 Gain "GTC,IP6" "ChAS,IPN" Xq28 50001(1|clone) MAGEA8 1 MAGEA8 1 - - - "143604(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),McCarroll(2008),Shaikh(2009))" - - 65 - 0 "143604(13|Wang(2007),Conrad(2009),Durbin(2010),McCarroll(2008),Campbell(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400655WB female "research_filter, clinical_filter" FOMC40154 8 183896 327495 143600 Gain 3 0.899406 168 859 chas 91.94 Gain 96.11 Gain 96.11 Gain GainGainGain 134 93.03 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.3 - ZNF596 1 ZNF596 1 - - - "142075(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),McKernan(2009),Pinto(2007))" "2722(10|Pang(2010),Levy(2007),Wheeler(2008),Matsuzaki(2009),Bentley(2008))" 31 134 - 0 "143600(47|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Perry(2008b),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" WSYP96126 10 135234127 135377265 143139 Loss 1 0.914476 236 609 chas 87.27 Loss 89.61 Loss 89.61 Loss LossLossLoss 119 93.89 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400660GK male "research_filter, clinical_filter" DDLZ80520 10 135234127 135377265 143139 Gain 3 0.898255 236 609 chas 87.39 Gain 93.93 Gain 96.97 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401892MJ female "research_filter, clinical_filter" UPRR75789 10 135234127 135377265 143139 Loss 1 0.91009 236 609 chas 65.14 Loss 83.61 Loss 91.85 Loss LossLossLoss 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400889CM female "research_filter, clinical_filter" FIIC23299 10 135234127 135377265 143139 Gain 3 0.885715 236 609 chas 69.19 Gain 77.71 Gain 89.61 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400843FL female "research_filter, clinical_filter" FPUC66465 10 135234127 135377265 143139 Gain 3 0.902075 236 609 chas 83.37 Gain 93.93 Gain 99.98 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400827MM male "research_filter, clinical_filter" DUXB26784 10 135234127 135377265 143139 Gain 3 0.901031 236 609 chas 87.39 Gain 95.28 Gain 99.98 Gain GainGainGain 119 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143139(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 118 - 0 "143139(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401519SA female "research_filter, clinical_filter" TEQK36134 5 104433581 104576696 143116 Loss 1 0.910365 103 1403 chas 99.99 Loss 94.82 Loss 100 Loss LossLossLoss 100 NA NA NA "ChAS,IPN,NXS,PTK" "5q21.3,5q21.2" - RAB9BP1 1 RAB9BP1 1 - - - "129596(16|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 1 100 - 0 "143116(51|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400908PJ female "research_filter, clinical_filter" BCMG96058 10 135234162 135377265 143104 Gain 3 0.901092 235 611 chas 59.38 Gain 83.66 Gain 76.81 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143104(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 117 - 0 "143104(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400013TA male "research_filter, clinical_filter" FMEA92817 10 135234162 135377265 143104 Gain 3 0.895531 235 611 chas 87.41 Gain 83.28 Gain 93.96 Gain GainGainGain 118 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "143104(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 117 - 0 "143104(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401175FA female "research_filter, clinical_filter" DOJD65755 9 30249305 30392080 142776 Gain 3 0.893687 88 1641 chas 95.7 Gain 95.73 Gain 97.87 Gain GainGainGain 93 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - "142776(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009))" "1104(4|Pang(2010),Levy(2007),Wheeler(2008),Bentley(2008))" - 93 - 0 "142776(29|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Pinto(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402023EC female "research_filter, clinical_filter" NSZE63198 5 17512016 17654787 142772 Loss 1 0.897174 28 5287 chas 29.94 Loss 67.78 Loss 0 - LossLoss- 27 37.3 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "142772(43|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 56 27 - 0 "142772(126|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400724CD male "research_filter, clinical_filter" AUMQ17072 5 17512016 17654787 142772 Loss 1 0.874851 28 5287 chas 0 - 0 - 0 - --- 27 NA NA NA ChAS 5p15.1 50001(1|clone) - 0 - 0 - - - "142772(43|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 56 27 - 0 "142772(126|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401856GC male clinical_filter UECJ73760 14 87979561 88122302 142742 Gain 3 0.88891 84 1719 chas 92.17 Gain 96.8 Gain 0 - GainGain- 69 NA NA NA "ChAS,IPN,NXS" 14q31.3 - - 0 - 0 - - - "20369(2|Kim(2009),Shaikh(2009))" 154(2|Mills(2006)) - 69 - 0 "22419(8|Kim(2009),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" GYBK42448 6 162598180 162740905 142726 Gain 3 0.909899 174 825 chas 99.66 Gain 99.54 Gain 99.84 Gain GainGainGain 122 99.67 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 PARK2 1 PARK2 - - "142726(24|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 800(4|Matsuzaki(2009)) - 122 PARK2#asd_candidate 1 "142726(45|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Wilson(2010),Altshuler(2010),Shaikh(2009),Park(2010),Redon(2006),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401277RA female "research_filter, clinical_filter" GUYS21436 2 116532361 116674814 142454 Gain 3 0.899738 104 1383 chas 32 Gain 99.42 Gain 99.42 Gain GainGainGain 106 NA NA NA "ChAS,IPN,NXS,PTK" 2q14.1 - DPP10 1 DPP10 1 - - - "142454(5|Park(2010),Pinto(2007),Redon(2006),Perry(2008))" "749(12|Conrad(2009),Conrad(2005),Matsuzaki(2009),Ju(2010),Pang(2010),Park(2010),Kim(2009))" - 106 DPP10#asd_candidate 1 "142454(42|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Conrad(2006),Durbin(2010),Pang(2010),Pinto(2011),Pinto(2007),Park(2010),Kim(2009))" TRUE TRUE ipn_yes algo_yes NA 400582WS female "research_filter, clinical_filter" JITM64437 12 31265044 31407111 142068 Gain 3 0.904251 56 2583 chas 36.07 Gain 87.68 Gain 88.66 Gain GainGainGain 94 90.86 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400661AD male "research_filter, clinical_filter" KLXQ40405 12 31265044 31407111 142068 Gain 3 0.902109 56 2583 chas 36.07 Gain 55.12 Gain 0 - GainGain- 94 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400051MR_1 male "research_filter, clinical_filter" HAGL80690 12 31265044 31407111 142068 Gain 3 0.903603 56 2583 chas 36.07 Gain 88.43 Gain 0 - GainGain- 94 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" AJUD27157 12 31265044 31407111 142068 Gain 3 0.909608 56 2583 chas 36.07 Gain 98.52 Gain 0 - GainGain- 94 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401075MN female "research_filter, clinical_filter" XGQH24350 12 31265044 31407111 142068 Gain 3 0.887652 56 2583 chas 36.07 Gain 0 - 0 - Gain-- 94 NA NA NA "ChAS,IPN" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401215MJ female "research_filter, clinical_filter" TZSA84286 12 31265044 31407111 142068 Gain 3 0.90115 56 2583 chas 26.97 Gain 94.45 Gain 0 - GainGain- 94 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401166WJ female "research_filter, clinical_filter" RPWI18802 12 31265044 31407111 142068 Gain 3 0.899845 56 2583 chas 32.95 Gain 89.88 Gain 99.99 Gain GainGainGain 94 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" RAQB29487 12 31265044 31407111 142068 Gain 3 0.904711 56 2583 chas 32.95 Gain 97.01 Gain 0 - GainGain- 94 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401746WW male "research_filter, clinical_filter" WMOD47474 12 31265044 31407111 142068 Gain 3 0.890174 56 2583 chas 32.95 Gain 99.87 Gain 0 - GainGain- 94 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" STES59258 12 31265044 31407111 142068 Gain 3 0.895839 56 2583 chas 97.11 Gain 89.02 Gain 100 Gain GainGainGain 94 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "142068(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 93 - 0 "142068(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" YMNK31782 12 31265151 31407111 141961 Gain 3 0.896363 55 2628 chas 36.09 Gain 87.75 Gain 0 - GainGain- 93 90.93 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "141961(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 92 - 0 "141961(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400438DB female "research_filter, clinical_filter" KGCF91244 12 31265151 31407111 141961 Gain 3 0.90543 55 2628 chas 36.09 Gain 90.68 Gain 0 - GainGain- 93 97.08 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "141961(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 92 - 0 "141961(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" JAVP94180 12 31265151 31407111 141961 Gain 3 0.883567 55 2628 chas 26.99 Gain 93.97 Gain 0 - GainGain- 93 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "141961(55|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 64 92 - 0 "141961(196|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" AUMQ17072 8 39247098 39388919 141822 Gain 3 0.909998 78 1841 chas 100 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141822(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 60 - 0 "141822(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401856GC male "research_filter, clinical_filter" SYHV89014 14 106525299 106667115 141817 Gain 3 0.910061 19 7878 chas 21.51 Gain 28.75 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141817(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141817(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400658BW male research_filter MKJI51363 14 106525299 106667115 141817 Gain 4 0.926414 19 7878 chas 21.51 Gain 28.75 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141817(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141817(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400047DS female research_filter WUVU37744 14 106525299 106667035 141737 Gain 3 0.913431 18 8337 chas 21.52 Gain 23.54 Gain 0 - GainGain- 68 21.93 Gain IP6 "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401763SG male research_filter VWYL75938 14 106525299 106667035 141737 Gain 4 0.921923 18 8337 chas 21.52 Gain 29.05 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401006ES female research_filter SJFM69248 14 106525299 106667035 141737 Gain 4 0.931274 18 8337 chas 21.52 Gain 28.77 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401655DC male research_filter ZNRO68615 14 106525299 106667035 141737 Gain 4 0.932892 18 8337 chas 21.52 Gain 28.77 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401862AN male research_filter XSKZ13040 14 106525299 106667035 141737 Gain 4 0.943751 18 8337 chas 21.52 Gain 28.77 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401824MM female research_filter FSLR52955 14 106525299 106667035 141737 Gain 4 0.94048 18 8337 chas 21.52 Gain 28.77 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "141737(43|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 62 68 - 0 "141737(355|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400987FB male research_filter VVDA27035 14 38426891 38568613 141723 Loss 1 0.912446 118 1211 chas 100 Loss 99.3 Loss 100 Loss LossLossLoss 79 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.1 - - 0 - 0 - - - - - - 79 - 0 "28750(4|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400377WJ male "research_filter, clinical_filter" NFIA96453 8 39247098 39388766 141669 Loss 0 0.97623 77 1864 chas 98.73 Loss 99.37 Loss 96.62 Loss LossLossLoss 59 98.73 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141669(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "141669(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400069CN female "research_filter, clinical_filter" XBAT84080 8 39247098 39388766 141669 Gain 4 0.923995 77 1864 chas 98.73 Gain 99.37 Gain 99.37 Gain GainGainGain 59 98.73 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141669(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "141669(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400186WC female "research_filter, clinical_filter" ABMS89106 8 39247098 39388766 141669 Gain 4 0.933583 77 1864 chas 98.73 Gain 100 Gain 100 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141669(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "141669(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401674DD male "research_filter, clinical_filter" ERKP22336 8 39247098 39388766 141669 Loss 0 0.966067 77 1864 chas 98.73 Loss 99.37 Loss 100 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141669(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "141669(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" VZCC67569 8 39247098 39388766 141669 Gain 3 0.895185 77 1864 chas 98.73 Gain 99.37 Gain 96.8 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "141669(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "141669(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" HAAE15834 5 46224011 46365514 141504 Loss 1 0.910168 30 4879 chas 0.35 Loss 58.12 Loss 0 - LossLoss- 28 NA NA NA "ChAS,IPN,NXS" 5p11 - - 0 - 0 - - - "141504(17|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 28 - 0 "141504(67|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" VIXQ67410 5 46224011 46365514 141504 Loss 1 0.892109 30 4879 chas 0.35 Loss 58.12 Loss 0 - LossLoss- 28 NA NA NA "ChAS,IPN,NXS" 5p11 - - 0 - 0 - - - "141504(17|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 28 - 0 "141504(67|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" DQHB62647 5 46224011 46365514 141504 Loss 1 0.927482 30 4879 chas 0 - 93.47 Loss 49.6 Loss #NAME? 28 NA NA NA "ChAS,NXS,PTK" 5p11 - - 0 - 0 - - - "141504(17|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 28 - 0 "141504(67|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401732HW male "research_filter, clinical_filter" BTJZ41884 11 51126724 51268156 141433 Gain 4 0.94833 26 5657 chas 53.36 Gain 99.99 Gain 0 - GainGain- 30 NA NA NA "ChAS,IPN,NXS" 11p11.12 - - 0 - 0 - - - "141433(8|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" 463(1|Wang(2008)) - 30 - 0 "141433(53|Ju(2010),Conrad(2009),Wang(2008),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400068PW female research_filter VUCC31552 5 17513397 17654787 141391 Loss 1 0.892538 27 5438 chas 30.23 Loss 60.77 Loss 0 - LossLoss- 26 37.66 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "141391(42|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 56 26 - 0 "141391(125|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400109LJ male "research_filter, clinical_filter" YOPA81411 5 17513397 17654787 141391 Loss 1 0.90106 27 5438 chas 30.23 Loss 65.02 Loss 0 - LossLoss- 26 NA NA NA "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "141391(42|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 56 26 - 0 "141391(125|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" WMFM14051 8 15493122 15634510 141389 Loss 1 0.913469 200 710 chas 99.9 Loss 99.95 Loss 100 Loss LossLossLoss 134 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - TUSC3 1 TUSC3 1 TUSC3 - - "141389(8|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Pinto(2007),McCarroll(2005),Shaikh(2009))" - - 134 TUSC3#id_known 1 "141389(20|Wang(2007),Redon(2006),Perry(2008),Teague(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400451kh female "research_filter, clinical_filter" ISVP82924 5 46224011 46365391 141381 Loss 1 0.888375 28 5236 chas 0 - 65.09 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "141381(17|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "141381(67|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401400NP male "research_filter, clinical_filter" BOFG10595 10 45210690 45351872 141183 Gain 3 0.893456 111 1283 chas 100 Gain 93.17 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.21 - TMEM72-AS1 1 TMEM72-AS1 1 - - - "141183(8|Jakobsson(2008),de Smith(2007),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 112 - 0 "141183(31|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400230TB male "research_filter, clinical_filter" PGEB85888 9 34725874 34866589 140716 Gain 3 0.894536 92 1546 chas 48.59 Gain 47.48 Gain 0 - GainGain- 76 NA NA NA "ChAS,IPN,NXS" 9p13.3 - "FAM205B,FAM205A" 2 "FAM205B,FAM205A" 2 - - - - - 9 76 - 0 "109033(15|Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" PYXL51166 8 39248308 39389003 140696 Gain 3 0.90706 78 1827 chas 98.55 Gain 99.2 Gain 99.2 Gain GainGainGain 60 98.55 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140696(36|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 59 - 0 "140696(259|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401146US female "research_filter, clinical_filter" QCXI89270 3 61892 202388 140497 Gain 3 0.910464 160 883 chas 69.85 Gain 100 Gain 99.99 Gain GainGainGain 137 99.75 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.3 - - 0 - 0 - - - "140497(14|Conrad(2009),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Pinto(2007),Redon(2006),Shaikh(2009))" "850(2|Levy(2007),Perry(2008))" 26 137 - 0 "140497(41|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Perry(2008b),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" HAGL80690 3 35800767 35941198 140432 Gain 3 0.904679 94 1510 chas 95.69 Gain 98.98 Gain 98.97 Gain GainGainGain 82 97.87 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.3 - ARPP21 1 ARPP21 1 - - - "140432(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 82 - 0 "140432(14|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" MOBN67062 3 35800767 35941198 140432 Gain 3 0.898262 94 1510 chas 95.69 Gain 97.9 Gain 98.97 Gain GainGainGain 82 NA NA NA "ChAS,IPN,NXS,PTK" 3p22.3 - ARPP21 1 ARPP21 1 - - - "140432(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 82 - 0 "140432(14|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400569WC female "research_filter, clinical_filter" HAAE15834 2 182030093 182170393 140301 Loss 1 0.932633 88 1612 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 93 NA NA NA "ChAS,IPN,NXS,PTK" 2q31.3 - MIR4437 1 MIR4437 1 - - - 2969(1|Pang(2010)) 1(1|Levy(2007)) - 93 - 0 "22780(9|Itsara(2009),Pang(2010),Durbin(2010),Teague(2010))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" TZAD89276 3 35800767 35940987 140221 Gain 3 0.901133 92 1540 chas 95.73 Gain 73.47 Gain 96.69 Gain GainGainGain 81 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.3 - ARPP21 1 ARPP21 1 - - - "140221(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 81 - 0 "140221(14|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401185LE female "research_filter, clinical_filter" HDQN23240 3 35800767 35940987 140221 Gain 3 0.904579 92 1540 chas 95.73 Gain 100 Gain 97.75 Gain GainGainGain 81 97.85 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.3 - ARPP21 1 ARPP21 1 - - - "140221(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 81 - 0 "140221(14|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400136DM female "research_filter, clinical_filter" ZIOC12306 8 39246760 39386952 140193 Gain 3 0.922682 77 1844 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400852WJ male "research_filter, clinical_filter" MRAO63769 8 39246760 39386952 140193 Gain 3 0.922925 77 1844 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" SKLJ58672 8 39246760 39386952 140193 Gain 3 0.921297 77 1844 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" NVMX58254 8 39246760 39386952 140193 Gain 3 0.916065 77 1844 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402060PD female "research_filter, clinical_filter" RQNQ20012 8 39246760 39386952 140193 Gain 4 0.946098 77 1844 chas 94.8 Gain 98.06 Gain 98.06 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401326LI female "research_filter, clinical_filter" EJVQ96131 8 39246760 39386952 140193 Gain 4 0.945188 77 1844 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400738WM female "research_filter, clinical_filter" UUMD32389 8 39246760 39386952 140193 Gain 4 0.926833 77 1844 chas 99.99 Gain 100 Gain 92.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "140193(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "140193(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400609FJ male "research_filter, clinical_filter" LCWB88916 X 153728341 153868484 140144 Gain 2 0.933671 344 408 chas 100 Gain 0 - 0 - Gain-- 36 NA NA NA "ChAS,IPN" Xq28 - "LINC00204A,LINC00204B,FAM3A,G6PD,IKBKG,CTAG1A,CTAG1B" 7 "LINC00204A,LINC00204B,FAM3A,G6PD,IKBKG,CTAG1A,CTAG1B" 7 "G6PD,IKBKG" - 22325(1|Kidd(2008)) "25778(4|Conrad(2009),Matsuzaki(2009))" 1527(2|Conrad(2009)) 48 36 IKBKG#id_known 1 "140144(22|Teague(2010),Conrad(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401725MR male "research_filter, clinical_filter" CWFZ39975 3 197711844 197851986 140143 Gain 3 0.899286 206 683 chas 30.39 Gain 91 Gain 99.75 Gain GainGainGain 103 97.44 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q29 - "LOC348840,LMLN" 2 "LOC348840,LMLN" 2 - - - "140143(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),McCarroll(2008))" "1679(2|Levy(2007),Bentley(2008))" 49 103 - 0 "140143(68|Conrad(2009),Jakobsson(2008),Perry(2008),Ju(2010),Conrad(2006),Levy(2007),Tuzun(2005),Iafrate(2004),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Redon(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" QRSF74396 3 197711844 197851986 140143 Gain 3 0.895774 206 683 chas 87.91 Gain 99.28 Gain 100 Gain GainGainGain 103 NA NA NA "ChAS,IPN,NXS,PTK" 3q29 - "LOC348840,LMLN" 2 "LOC348840,LMLN" 2 - - - "140143(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),McCarroll(2008))" "1679(2|Levy(2007),Bentley(2008))" 49 103 - 0 "140143(68|Conrad(2009),Jakobsson(2008),Perry(2008),Ju(2010),Conrad(2006),Levy(2007),Tuzun(2005),Iafrate(2004),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Redon(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401500OM male "research_filter, clinical_filter" TFBW53379 1 248688221 248828223 140003 Loss 0 0.981511 64 2222 chas 30.02 Loss 33.84 Loss 31.21 Loss LossLossLoss 60 56.15 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 6 "OR2T29,OR2T10,OR2T11,OR2T34,OR2T35,OR2T27" 6 - - "140003(2|Kidd(2008),Ahn(2009))" "140003(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" "3172(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 66 60 - 0 "140003(89|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Ju(2010),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" QJEX76408 5 74556663 74696638 139976 Gain 3 0.901327 152 926 chas 92.17 Gain 98.79 Gain 98.86 Gain GainGainGain 87 NA NA NA "ChAS,IPN,NXS,PTK" 5q13.3 - "COL4A3BP,HMGCR" 2 "COL4A3BP,HMGCR" 2 HMGCR - - "3142(2|McKernan(2009),Mills(2006))" - 5 87 - 0 "59424(5|McKernan(2009),Redon(2006),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400413FJ female "research_filter, clinical_filter" PVOR72227 8 39247098 39386952 139855 Loss 0 0.979902 76 1864 chas 100 Loss 100 Loss 76.97 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" ZQHJ50767 8 39247098 39386952 139855 Gain 4 0.928437 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" RWTQ90156 8 39247098 39386952 139855 Gain 3 0.911074 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" IAET85141 8 39247098 39386952 139855 Gain 3 0.917941 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401136LB male "research_filter, clinical_filter" JITM64437 8 39247098 39386952 139855 Gain 3 0.909854 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400661AD male "research_filter, clinical_filter" OFVS61400 8 39247098 39386952 139855 Gain 4 0.92959 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401143LK female "research_filter, clinical_filter" HXSU46589 8 39247098 39386952 139855 Gain 4 0.935207 76 1864 chas 100 Gain 99.38 Gain 99.38 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401299ST female "research_filter, clinical_filter" FOMC40154 8 39247098 39386952 139855 Loss 0 0.980953 76 1864 chas 100 Loss 90.25 Loss 70.34 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" JKIG25467 8 39247098 39386952 139855 Gain 4 0.926813 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400645KM male "research_filter, clinical_filter" XWKR95070 8 39247098 39386952 139855 Gain 3 0.911572 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" UZKE50615 8 39247098 39386952 139855 Gain 3 0.904522 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400789KV male "research_filter, clinical_filter" FCXX78522 8 39247098 39386952 139855 Gain 4 0.926874 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" BNID76344 8 39247098 39386952 139855 Loss 0 0.98472 76 1864 chas 100 Loss 100 Loss 61.31 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" ICDL89338 8 39247098 39386952 139855 Gain 4 0.922134 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" OYDK45967 8 39247098 39386952 139855 Gain 4 0.922257 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401162TM female "research_filter, clinical_filter" LHRU87236 8 39247098 39386952 139855 Gain 4 0.925878 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401038LN female "research_filter, clinical_filter" FPHR45460 8 39247098 39386952 139855 Gain 4 0.937961 76 1864 chas 100 Gain 100 Gain 98.26 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" JVBB89605 8 39247098 39386952 139855 Gain 3 0.917879 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" PSUS84601 8 39247098 39386952 139855 Gain 3 0.913809 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" YWQF89241 8 39247098 39386952 139855 Loss 0 0.986831 76 1864 chas 100 Loss 100 Loss 86.24 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" LETQ64470 8 39247098 39386952 139855 Loss 0 0.980345 76 1864 chas 100 Loss 100 Loss 56.39 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" SRJV59260 8 39247098 39386952 139855 Gain 3 0.899998 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" DBFY56089 8 39247098 39386952 139855 Loss 0 0.9851 76 1864 chas 100 Loss 100 Loss 92.19 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400458LS female "research_filter, clinical_filter" SBZX25020 8 39247098 39386952 139855 Loss 1 0.953124 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" YRQD30893 8 39247098 39386952 139855 Gain 3 0.902945 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401022ML female "research_filter, clinical_filter" EEVS84165 8 39247098 39386952 139855 Gain 4 0.940304 76 1864 chas 100 Gain 100 Gain 98.06 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401039PA male "research_filter, clinical_filter" MTFT89424 8 39247098 39386952 139855 Gain 3 0.920064 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" GKVG35266 8 39247098 39386952 139855 Loss 0 0.984738 76 1864 chas 100 Loss 100 Loss 52.18 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" ORXH15927 8 39247098 39386952 139855 Loss 0 0.981854 76 1864 chas 100 Loss 100 Loss 92.7 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" XOPW74186 8 39247098 39386952 139855 Gain 3 0.905913 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" CCNM95095 8 39247098 39386952 139855 Gain 3 0.892602 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401881TJ male "research_filter, clinical_filter" XMVT70735 8 39247098 39386952 139855 Loss 0 0.988253 76 1864 chas 100 Loss 100 Loss 50.9 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401873BK male "research_filter, clinical_filter" YMBI36841 8 39247098 39386952 139855 Loss 0 0.984454 76 1864 chas 100 Loss 100 Loss 68.02 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401321CE female "research_filter, clinical_filter" YLSX27992 8 39247098 39386952 139855 Gain 3 0.912706 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" VZJS13167 8 39247098 39386952 139855 Loss 0 0.982707 76 1864 chas 100 Loss 100 Loss 84.46 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400213DB female "research_filter, clinical_filter" YMNK31782 8 39247098 39386952 139855 Loss 0 0.981295 76 1864 chas 100 Loss 100 Loss 93.96 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400438DB female "research_filter, clinical_filter" ALWU32623 8 39247098 39386952 139855 Loss 0 0.983024 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400595CP female "research_filter, clinical_filter" TOAX48712 8 39247098 39386952 139855 Gain 3 0.908502 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" NKFT59098 8 39247098 39386952 139855 Gain 4 0.927986 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400012CJ female "research_filter, clinical_filter" ELXG87337 8 39247098 39386952 139855 Loss 0 0.983217 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401634CH male "research_filter, clinical_filter" TCSA61368 8 39247098 39386952 139855 Gain 4 0.942391 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" HEAQ37888 8 39247098 39386952 139855 Gain 4 0.925013 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400956AM male "research_filter, clinical_filter" TFVC48426 8 39247098 39386952 139855 Gain 3 0.917898 76 1864 chas 100 Gain 100 Gain 98.06 Gain GainGainGain 57 97.98 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400501SJ male "research_filter, clinical_filter" OEHV36421 8 39247098 39386952 139855 Gain 3 0.91774 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401997HB male "research_filter, clinical_filter" VLMR80827 8 39247098 39386952 139855 Gain 3 0.922353 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401630MK female "research_filter, clinical_filter" HXWA61262 8 39247098 39386952 139855 Gain 3 0.912586 76 1864 chas 100 Gain 100 Gain 98.26 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401438HT male "research_filter, clinical_filter" FXID76383 8 39247098 39386952 139855 Loss 0 0.98393 76 1864 chas 100 Loss 100 Loss 50.93 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" VZJA70154 8 39247098 39386952 139855 Gain 3 0.907702 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401427CB male "research_filter, clinical_filter" KECG80750 8 39247098 39386952 139855 Gain 3 0.920728 76 1864 chas 100 Gain 100 Gain 98.26 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400893ZE male "research_filter, clinical_filter" QUHC56771 8 39247098 39386952 139855 Loss 0 0.983034 76 1864 chas 100 Loss 100 Loss 80.12 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400128MJ female "research_filter, clinical_filter" UKBP75340 8 39247098 39386952 139855 Gain 4 0.925102 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" KLEB18411 8 39247098 39386952 139855 Gain 4 0.929128 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" CSHY74530 8 39247098 39386952 139855 Gain 4 0.935578 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" LLZZ76842 8 39247098 39386952 139855 Gain 4 0.924638 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400354TJ female "research_filter, clinical_filter" WHSN55625 8 39247098 39386952 139855 Gain 4 0.922312 76 1864 chas 100 Gain 100 Gain 98.26 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" ZXNE12672 8 39247098 39386952 139855 Loss 0 0.982753 76 1864 chas 100 Loss 100 Loss 90.25 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400070PC female "research_filter, clinical_filter" GPXE42967 8 39247098 39386952 139855 Gain 3 0.914474 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400006DK female "research_filter, clinical_filter" SBST92406 8 39247098 39386952 139855 Gain 3 0.919942 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401926MR_1 male "research_filter, clinical_filter" KRGM31190 8 39247098 39386952 139855 Gain 3 0.898566 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" AIRH51991 8 39247098 39386952 139855 Gain 4 0.92386 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400236DB_1 male "research_filter, clinical_filter" RAZI40834 8 39247098 39386952 139855 Gain 3 0.897472 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" RCQQ88896 8 39247098 39386952 139855 Loss 0 0.983354 76 1864 chas 100 Loss 100 Loss 63.2 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" TQFG68171 8 39247098 39386952 139855 Gain 4 0.926046 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" XNUA56302 8 39247098 39386952 139855 Loss 0 0.981739 76 1864 chas 100 Loss 100 Loss 68.02 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" IJPA28382 8 39247098 39386952 139855 Loss 0 0.975768 76 1864 chas 100 Loss 100 Loss 76.02 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400103BN female "research_filter, clinical_filter" KGCF91244 8 39247098 39386952 139855 Gain 4 0.921106 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" BTBU94149 8 39247098 39386952 139855 Loss 0 0.981301 76 1864 chas 100 Loss 100 Loss 74.41 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401177SL female "research_filter, clinical_filter" EJLX27201 8 39247098 39386952 139855 Gain 3 0.905231 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400545EW_1 female "research_filter, clinical_filter" RBBO63662 8 39247098 39386952 139855 Gain 3 0.912498 76 1864 chas 100 Gain 84.97 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401105WS male "research_filter, clinical_filter" GUZB61909 8 39247098 39386952 139855 Gain 4 0.932026 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401029SD_1 female "research_filter, clinical_filter" HXGR62358 8 39247098 39386952 139855 Gain 4 0.941413 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male "research_filter, clinical_filter" USUN51593 8 39247098 39386952 139855 Gain 4 0.939484 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" OAZH14211 8 39247098 39386952 139855 Loss 0 0.982289 76 1864 chas 100 Loss 100 Loss 70.34 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400246MG male "research_filter, clinical_filter" RVAL88696 8 39247098 39386952 139855 Gain 4 0.92841 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400353ML male "research_filter, clinical_filter" VOUF55858 8 39247098 39386952 139855 Loss 0 0.973734 76 1864 chas 100 Loss 100 Loss 88.09 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400338SR male "research_filter, clinical_filter" DOLM19463 8 39247098 39386952 139855 Gain 3 0.910934 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401607LL male "research_filter, clinical_filter" CVRD94421 8 39247098 39386952 139855 Loss 0 0.982003 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400586RD male "research_filter, clinical_filter" HAGL80690 8 39247098 39386952 139855 Gain 4 0.924017 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" MGJJ89085 8 39247098 39386952 139855 Gain 4 0.923926 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" WBPB92916 8 39247098 39386952 139855 Gain 3 0.908037 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401210PB male "research_filter, clinical_filter" PTWY73614 8 39247098 39386952 139855 Loss 0 0.984387 76 1864 chas 100 Loss 100 Loss 80.09 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401540GM male "research_filter, clinical_filter" QMSH77829 8 39247098 39386952 139855 Gain 4 0.922062 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400038CK male "research_filter, clinical_filter" CRTB70467 8 39247098 39386952 139855 Gain 3 0.903372 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400577MK female "research_filter, clinical_filter" UYPJ72832 8 39247098 39386952 139855 Gain 3 0.906667 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401240ML female "research_filter, clinical_filter" TASV63603 8 39247098 39386952 139855 Gain 3 0.920861 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" WCSO50334 8 39247098 39386952 139855 Gain 4 0.932299 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400073HT male "research_filter, clinical_filter" GQXG36971 8 39247098 39386952 139855 Gain 4 0.929958 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" ZSEZ81141 8 39247098 39386952 139855 Gain 4 0.930835 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" QAGW25123 8 39247098 39386952 139855 Loss 0 0.98077 76 1864 chas 100 Loss 100 Loss 97.38 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" OBWN97941 8 39247098 39386952 139855 Gain 3 0.91869 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" PQCI84759 8 39247098 39386952 139855 Loss 0 0.97609 76 1864 chas 100 Loss 100 Loss 64.6 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" WUVU37744 8 39247098 39386952 139855 Gain 4 0.938447 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" GEZQ95890 8 39247098 39386952 139855 Gain 4 0.924431 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" CBEA57280 8 39247098 39386952 139855 Loss 0 0.977419 76 1864 chas 100 Loss 100 Loss 78.83 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" LYLG55293 8 39247098 39386952 139855 Loss 0 0.974155 76 1864 chas 100 Loss 100 Loss 88.58 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" UCHK30425 8 39247098 39386952 139855 Gain 3 0.917342 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400385LJ female "research_filter, clinical_filter" AYKK27829 8 39247098 39386952 139855 Gain 3 0.915082 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" ZKDO15212 8 39247098 39386952 139855 Gain 4 0.922666 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400361HC female "research_filter, clinical_filter" RYTQ14327 8 39247098 39386952 139855 Gain 3 0.892344 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" PZCO50940 8 39247098 39386952 139855 Gain 3 0.905055 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" NBJX82400 8 39247098 39386952 139855 Gain 4 0.923429 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400014SL female "research_filter, clinical_filter" THKF48028 8 39247098 39386952 139855 Gain 4 0.928392 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400601WC female "research_filter, clinical_filter" JSIF57066 8 39247098 39386952 139855 Loss 0 0.983954 76 1864 chas 100 Loss 100 Loss 70.16 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400512LR female "research_filter, clinical_filter" VABQ19693 8 39247098 39386952 139855 Gain 3 0.907058 76 1864 chas 100 Gain 100 Gain 99.37 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" ZJYL67451 8 39247098 39386952 139855 Loss 0 0.982446 76 1864 chas 100 Loss 100 Loss 79.41 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401025SM male "research_filter, clinical_filter" KEHV72339 8 39247098 39386952 139855 Gain 3 0.910861 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" JUSU56143 8 39247098 39386952 139855 Gain 4 0.937877 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" UHIX56739 8 39247098 39386952 139855 Gain 4 0.928764 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401040KM female "research_filter, clinical_filter" XDYS74119 8 39247098 39386952 139855 Gain 3 0.916992 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401019MP female "research_filter, clinical_filter" FISX28606 8 39247098 39386952 139855 Gain 4 0.923077 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400677HD male "research_filter, clinical_filter" BDAF16773 8 39247098 39386952 139855 Gain 4 0.924516 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" ZYTR30302 8 39247098 39386952 139855 Loss 0 0.973118 76 1864 chas 100 Loss 100 Loss 70.42 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400356MC female "research_filter, clinical_filter" IFQR85921 8 39247098 39386952 139855 Loss 0 0.967935 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400835FD female "research_filter, clinical_filter" MGYM61346 8 39247098 39386952 139855 Loss 0 0.975094 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400974PS female "research_filter, clinical_filter" VWRZ18168 8 39247098 39386952 139855 Gain 4 0.925404 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400890IT male "research_filter, clinical_filter" WCXF39029 8 39247098 39386952 139855 Gain 4 0.943787 76 1864 chas 100 Gain 98.26 Gain 99.38 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400788PV male "research_filter, clinical_filter" UYAI76550 8 39247098 39386952 139855 Gain 3 0.919752 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" MDAA91863 8 39247098 39386952 139855 Gain 3 0.919085 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" XFEU37018 8 39247098 39386952 139855 Loss 0 0.978456 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" TJGR62389 8 39247098 39386952 139855 Loss 0 0.98802 76 1864 chas 100 Loss 100 Loss 81.04 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" RYUR49963 8 39247098 39386952 139855 Gain 4 0.929733 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400177SJ male "research_filter, clinical_filter" YDUL84017 8 39247098 39386952 139855 Gain 4 0.934489 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" AWAR79338 8 39247098 39386952 139855 Gain 3 0.907188 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" YBGD61325 8 39247098 39386952 139855 Gain 4 0.933888 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400543CK male "research_filter, clinical_filter" INUW24322 8 39247098 39386952 139855 Loss 0 0.979153 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400110MD male "research_filter, clinical_filter" PRHX42947 8 39247098 39386952 139855 Gain 4 0.931455 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400429YF female "research_filter, clinical_filter" PAIU48992 8 39247098 39386952 139855 Gain 3 0.922847 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" YZQJ34471 8 39247098 39386952 139855 Gain 3 0.907003 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400482MD male "research_filter, clinical_filter" HGCG44121 8 39247098 39386952 139855 Gain 3 0.911718 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" HDQS55514 8 39247098 39386952 139855 Gain 4 0.921807 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400653GP male "research_filter, clinical_filter" DGQM75197 8 39247098 39386952 139855 Gain 4 0.940132 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" ORNW53006 8 39247098 39386952 139855 Gain 3 0.900656 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400494ML female "research_filter, clinical_filter" CWFZ39975 8 39247098 39386952 139855 Gain 3 0.911625 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" KZTP77176 8 39247098 39386952 139855 Gain 4 0.923362 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" YKLI59783 8 39247098 39386952 139855 Gain 3 0.908726 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" THXY16685 8 39247098 39386952 139855 Gain 4 0.924223 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" NCJU46793 8 39247098 39386952 139855 Loss 0 0.980321 76 1864 chas 100 Loss 100 Loss 49.05 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" QKWF92816 8 39247098 39386952 139855 Loss 0 0.975968 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400295PS female "research_filter, clinical_filter" EMKM20452 8 39247098 39386952 139855 Loss 1 0.973394 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" ISXJ62958 8 39247098 39386952 139855 Gain 3 0.910681 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" ZRXE40373 8 39247098 39386952 139855 Gain 3 0.917389 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" OVRI44012 8 39247098 39386952 139855 Gain 4 0.934596 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400083TG male "research_filter, clinical_filter" MUIH56067 8 39247098 39386952 139855 Gain 3 0.911915 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" JTJC66263 8 39247098 39386952 139855 Gain 3 0.912018 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" ZVZK64221 8 39247098 39386952 139855 Gain 4 0.935186 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401911FL male "research_filter, clinical_filter" PBCS27067 8 39247098 39386952 139855 Gain 4 0.933998 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" XUMQ23395 8 39247098 39386952 139855 Gain 4 0.9339 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401875FG male "research_filter, clinical_filter" WSSG80726 8 39247098 39386952 139855 Gain 3 0.917974 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" ZVON68408 8 39247098 39386952 139855 Gain 4 0.932173 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" OGJP80646 8 39247098 39386952 139855 Gain 4 0.9304 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400704LC female "research_filter, clinical_filter" JSHH93314 8 39247098 39386952 139855 Loss 0 0.97159 76 1864 chas 100 Loss 100 Loss 92 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" JGYN82468 8 39247098 39386952 139855 Gain 4 0.949812 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" KMMD77027 8 39247098 39386952 139855 Loss 0 0.972019 76 1864 chas 100 Loss 100 Loss 80.6 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400783MJ male "research_filter, clinical_filter" UOXQ52793 8 39247098 39386952 139855 Loss 0 0.977196 76 1864 chas 100 Loss 100 Loss 64.66 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400791GC female "research_filter, clinical_filter" PXVB29564 8 39247098 39386952 139855 Gain 4 0.935839 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" DLXG88049 8 39247098 39386952 139855 Gain 4 0.929045 76 1864 chas 100 Gain 100 Gain 98.06 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" FXTM73808 8 39247098 39386952 139855 Loss 0 0.984421 76 1864 chas 100 Loss 100 Loss 59.64 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401030GI female "research_filter, clinical_filter" IJCV29609 8 39247098 39386952 139855 Gain 3 0.91849 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" ERUW26412 8 39247098 39386952 139855 Gain 4 0.932789 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" IWPA56866 8 39247098 39386952 139855 Gain 4 0.929583 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401700BN_1 female "research_filter, clinical_filter" BKFI83925 8 39247098 39386952 139855 Gain 3 0.915692 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" KXKI34745 8 39247098 39386952 139855 Gain 3 0.912162 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" DZNQ84721 8 39247098 39386952 139855 Loss 0 0.982043 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400866RR male "research_filter, clinical_filter" RLDP86471 8 39247098 39386952 139855 Gain 3 0.905576 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400329HJ female "research_filter, clinical_filter" MOBN67062 8 39247098 39386952 139855 Loss 1 0.966011 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400569WC female "research_filter, clinical_filter" REUG17486 8 39247098 39386952 139855 Loss 0 0.97541 76 1864 chas 100 Loss 100 Loss 86.57 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" UAYA68179 8 39247098 39386952 139855 Gain 3 0.896865 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401729AC female "research_filter, clinical_filter" LMJA76842 8 39247098 39386952 139855 Gain 3 0.908023 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" NFNX93095 8 39247098 39386952 139855 Gain 3 0.906447 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401318AV female "research_filter, clinical_filter" YMWQ49708 8 39247098 39386952 139855 Gain 3 0.898947 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401403TD male "research_filter, clinical_filter" GBQV50998 8 39247098 39386952 139855 Loss 0 0.977586 76 1864 chas 100 Loss 100 Loss 72.95 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401818PC male "research_filter, clinical_filter" YITU99076 8 39247098 39386952 139855 Loss 0 0.972549 76 1864 chas 100 Loss 88.12 Loss 72.49 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401362ME male "research_filter, clinical_filter" DOUQ66820 8 39247098 39386952 139855 Loss 0 0.97021 76 1864 chas 100 Loss 100 Loss 71.44 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" EFHU67365 8 39247098 39386952 139855 Gain 3 0.911106 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401333MM male "research_filter, clinical_filter" RJMG42549 8 39247098 39386952 139855 Loss 0 0.976148 76 1864 chas 100 Loss 100 Loss 72.95 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400749VW male "research_filter, clinical_filter" AVAH45014 8 39247098 39386952 139855 Loss 0 0.972045 76 1864 chas 100 Loss 100 Loss 92.19 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" OUAW94182 8 39247098 39386952 139855 Gain 3 0.912079 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402063WM female "research_filter, clinical_filter" ROCO41006 8 39247098 39386952 139855 Loss 0 0.971154 76 1864 chas 100 Loss 100 Loss 71.44 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" YJHX17222 8 39247098 39386952 139855 Gain 3 0.914957 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" QJEX76408 8 39247098 39386952 139855 Gain 3 0.917373 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400413FJ female "research_filter, clinical_filter" TABQ91013 8 39247098 39386952 139855 Loss 0 0.973917 76 1864 chas 100 Loss 100 Loss 66.68 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" OBHQ36250 8 39247098 39386952 139855 Gain 3 0.910151 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401011PJ female "research_filter, clinical_filter" BLGS11062 8 39247098 39386952 139855 Loss 0 0.971226 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401714BM female "research_filter, clinical_filter" WNMH95182 8 39247098 39386952 139855 Gain 3 0.915341 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" TDHB82208 8 39247098 39386952 139855 Loss 0 0.974888 76 1864 chas 100 Loss 100 Loss 61.15 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400923OA female "research_filter, clinical_filter" CVYW15790 8 39247098 39386952 139855 Loss 0 0.972773 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" FYVR80369 8 39247098 39386952 139855 Loss 0 0.979539 76 1864 chas 100 Loss 100 Loss 60.85 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401448BJ male "research_filter, clinical_filter" TPDE39419 8 39247098 39386952 139855 Gain 4 0.935037 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401369GR male "research_filter, clinical_filter" LSSN67820 8 39247098 39386952 139855 Gain 3 0.918333 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" SXXB40252 8 39247098 39386952 139855 Gain 3 0.907807 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401495NR male "research_filter, clinical_filter" RIAA15120 8 39247098 39386952 139855 Gain 3 0.9015 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" OSBA52088 8 39247098 39386952 139855 Gain 3 0.920413 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401617KM female "research_filter, clinical_filter" JIVU24920 8 39247098 39386952 139855 Gain 4 0.92728 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400168HC female "research_filter, clinical_filter" ZQFY18932 8 39247098 39386952 139855 Loss 0 0.974939 76 1864 chas 100 Loss 100 Loss 92.7 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" DZXX36994 8 39247098 39386952 139855 Gain 3 0.914389 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401005BL female "research_filter, clinical_filter" NDHJ32269 8 39247098 39386952 139855 Loss 0 0.974501 76 1864 chas 100 Loss 100 Loss 51.19 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402008MC female "research_filter, clinical_filter" SEZK29585 8 39247098 39386952 139855 Loss 0 0.972762 76 1864 chas 100 Loss 100 Loss 88.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" EIKI77114 8 39247098 39386952 139855 Gain 3 0.901048 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" QBXB16173 8 39247098 39386952 139855 Gain 3 0.917768 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" ZHGO36222 8 39247098 39386952 139855 Gain 3 0.914159 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401135CS female "research_filter, clinical_filter" YAZD71442 8 39247098 39386952 139855 Gain 3 0.915636 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" XREB60973 8 39247098 39386952 139855 Gain 3 0.904815 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" UAVX81306 8 39247098 39386952 139855 Loss 0 0.980215 76 1864 chas 100 Loss 100 Loss 79.9 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400643LD male "research_filter, clinical_filter" FNSQ39400 8 39247098 39386952 139855 Loss 0 0.977769 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" RPJZ72910 8 39247098 39386952 139855 Gain 3 0.913172 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401395OP male "research_filter, clinical_filter" IUXY17884 8 39247098 39386952 139855 Loss 1 0.964585 76 1864 chas 100 Loss 100 Loss 98.49 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401238QR male "research_filter, clinical_filter" KGYY91251 8 39247098 39386952 139855 Gain 3 0.903632 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401348RB male "research_filter, clinical_filter" SEHC73357 8 39247098 39386952 139855 Loss 0 0.964263 76 1864 chas 100 Loss 100 Loss 95.06 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402019MC male "research_filter, clinical_filter" IREV30826 8 39247098 39386952 139855 Gain 3 0.917762 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401413RG male "research_filter, clinical_filter" RXRT66436 8 39247098 39386952 139855 Gain 3 0.901286 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" YQAG97358 8 39247098 39386952 139855 Gain 4 0.929175 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401499JR male "research_filter, clinical_filter" ZZDG28391 8 39247098 39386952 139855 Gain 3 0.910929 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" UIPG73190 8 39247098 39386952 139855 Gain 3 0.896288 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401809FU female "research_filter, clinical_filter" OOYJ75103 8 39247098 39386952 139855 Gain 4 0.925116 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401672FD female "research_filter, clinical_filter" WMBQ46007 8 39247098 39386952 139855 Loss 0 0.977707 76 1864 chas 100 Loss 100 Loss 60.16 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" VBTG63612 8 39247098 39386952 139855 Gain 3 0.915313 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401550SP female "research_filter, clinical_filter" CVWU93815 8 39247098 39386952 139855 Loss 0 0.977467 76 1864 chas 100 Loss 100 Loss 56.3 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401253MC female "research_filter, clinical_filter" RPZL61223 8 39247098 39386952 139855 Loss 0 0.969105 76 1864 chas 100 Loss 90.25 Loss 74.47 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" YHQC23155 8 39247098 39386952 139855 Loss 0 0.976128 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401906DT female "research_filter, clinical_filter" MMSK97554 8 39247098 39386952 139855 Gain 3 0.909513 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401091HS male "research_filter, clinical_filter" YPKU53656 8 39247098 39386952 139855 Gain 3 0.918231 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402022SM female "research_filter, clinical_filter" CQAD90614 8 39247098 39386952 139855 Gain 4 0.945053 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401346FJ female "research_filter, clinical_filter" YIUT48601 8 39247098 39386952 139855 Gain 3 0.916421 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401274PA female "research_filter, clinical_filter" NGFJ29672 8 39247098 39386952 139855 Loss 0 0.977821 76 1864 chas 100 Loss 90.25 Loss 78.16 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400269DA female "research_filter, clinical_filter" BNYR92388 8 39247098 39386952 139855 Gain 3 0.920998 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401587RC female "research_filter, clinical_filter" IAMC34091 8 39247098 39386952 139855 Gain 4 0.937118 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402067KS female "research_filter, clinical_filter" KZWZ86845 8 39247098 39386952 139855 Gain 3 0.920626 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400178RH female "research_filter, clinical_filter" MKJI51363 8 39247098 39386952 139855 Gain 3 0.919095 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" MFZY15027 8 39247098 39386952 139855 Loss 0 0.977922 76 1864 chas 100 Loss 100 Loss 68.82 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" IZZO20602 8 39247098 39386952 139855 Gain 3 0.922086 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" SURU67526 8 39247098 39386952 139855 Gain 4 0.936242 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400675HC female "research_filter, clinical_filter" XUUY89365 8 39247098 39386952 139855 Gain 3 0.913017 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" KWBM98824 8 39247098 39386952 139855 Gain 3 0.915532 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" KKJQ91569 8 39247098 39386952 139855 Loss 0 0.974442 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400258BC female "research_filter, clinical_filter" QGBC35391 8 39247098 39386952 139855 Gain 3 0.914926 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402051AF female "research_filter, clinical_filter" LHVX52107 8 39247098 39386952 139855 Gain 3 0.89657 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401341TS female "research_filter, clinical_filter" TPCN38834 8 39247098 39386952 139855 Gain 3 0.906583 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" JMWD59875 8 39247098 39386952 139855 Loss 0 0.974831 76 1864 chas 100 Loss 100 Loss 80.59 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402048WB female "research_filter, clinical_filter" FMEA92817 8 39247098 39386952 139855 Gain 3 0.909937 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401175FA female "research_filter, clinical_filter" OOSY20649 8 39247098 39386952 139855 Gain 4 0.932589 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401817MC female "research_filter, clinical_filter" VXMJ58338 8 39247098 39386952 139855 Gain 3 0.913291 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" IAQN76409 8 39247098 39386952 139855 Gain 4 0.939683 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" QNLU68354 8 39247098 39386952 139855 Loss 0 0.972602 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401829FJ female "research_filter, clinical_filter" YBSU20689 8 39247098 39386952 139855 Gain 4 0.932011 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" BRIY29802 8 39247098 39386952 139855 Loss 0 0.964714 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" XHZD61935 8 39247098 39386952 139855 Gain 4 0.938056 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" MNUZ55770 8 39247098 39386952 139855 Gain 4 0.922208 76 1864 chas 100 Gain 98.26 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400292LP female "research_filter, clinical_filter" UFYD24142 8 39247098 39386952 139855 Loss 0 0.978503 76 1864 chas 100 Loss 100 Loss 76.7 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400313DF female "research_filter, clinical_filter" LOOD16085 8 39247098 39386952 139855 Gain 4 0.936511 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400376SJ female "research_filter, clinical_filter" JABM59002 8 39247098 39386952 139855 Gain 4 0.923844 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400328LM female "research_filter, clinical_filter" TEQK36134 8 39247098 39386952 139855 Gain 3 0.919423 76 1864 chas 100 Gain 100 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400908PJ female "research_filter, clinical_filter" JITZ20982 8 39247098 39386952 139855 Gain 3 0.91779 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401180GR male "research_filter, clinical_filter" TBVD73320 8 39247098 39386952 139855 Gain 3 0.920006 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400712GC female "research_filter, clinical_filter" QKSF16477 8 39247098 39386952 139855 Loss 0 0.971858 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" JKGU55742 8 39247098 39386952 139855 Loss 0 0.985241 76 1864 chas 100 Loss 100 Loss 81.9 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400880TM male "research_filter, clinical_filter" XSMN99460 8 39247098 39386952 139855 Gain 4 0.939997 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401235IA male "research_filter, clinical_filter" DMPI37172 8 39247098 39386952 139855 Loss 0 0.973477 76 1864 chas 100 Loss 100 Loss 98.49 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400287BP male "research_filter, clinical_filter" VGND49817 8 39247098 39386952 139855 Gain 4 0.931244 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" GSWW54097 8 39247098 39386952 139855 Gain 3 0.914503 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401620BA female "research_filter, clinical_filter" PGEB85888 8 39247098 39386952 139855 Gain 3 0.915322 76 1864 chas 100 Gain 99.38 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" GWDY85049 8 39247098 39386952 139855 Loss 0 0.978933 76 1864 chas 100 Loss 100 Loss 76.7 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401093VL female "research_filter, clinical_filter" ATJL19217 8 39247098 39386952 139855 Gain 4 0.928349 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401608GE female "research_filter, clinical_filter" TZXJ50703 8 39247098 39386952 139855 Loss 0 0.973492 76 1864 chas 100 Loss 90.25 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" ZNRO68615 8 39247098 39386952 139855 Gain 4 0.926125 76 1864 chas 100 Gain 99.38 Gain 99.38 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401862AN male "research_filter, clinical_filter" ASYD11505 8 39247098 39386952 139855 Loss 0 0.972525 76 1864 chas 100 Loss 100 Loss 96.37 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402024BB male "research_filter, clinical_filter" XNQF62194 8 39247098 39386952 139855 Loss 0 0.97286 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401690HA male "research_filter, clinical_filter" UMLY49839 8 39247098 39386952 139855 Gain 3 0.91061 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" FGSE34256 8 39247098 39386952 139855 Gain 3 0.917635 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" SAHS24305 8 39247098 39386952 139855 Gain 4 0.927005 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" FRXS36515 8 39247098 39386952 139855 Gain 4 0.932198 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400769SL female "research_filter, clinical_filter" YTCX24219 8 39247098 39386952 139855 Gain 4 0.925741 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" XOQW96687 8 39247098 39386952 139855 Gain 3 0.911758 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" ACWT82545 8 39247098 39386952 139855 Gain 4 0.925798 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" LUVG84905 8 39247098 39386952 139855 Gain 3 0.897122 76 1864 chas 100 Gain 84.97 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401664SD male "research_filter, clinical_filter" EGYT92211 8 39247098 39386952 139855 Loss 0 0.982166 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401402EN male "research_filter, clinical_filter" YDLH53232 8 39247098 39386952 139855 Loss 0 0.968821 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401691HA male "research_filter, clinical_filter" JPSN96941 8 39247098 39386952 139855 Gain 3 0.909318 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" RNZZ40210 8 39247098 39386952 139855 Loss 0 0.985163 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" DJYF53115 8 39247098 39386952 139855 Gain 3 0.9012 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401184MM male "research_filter, clinical_filter" NLWZ33045 8 39247098 39386952 139855 Gain 3 0.914216 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401993HM female "research_filter, clinical_filter" OZXZ40778 8 39247098 39386952 139855 Loss 0 0.985201 76 1864 chas 100 Loss 100 Loss 79.63 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" XZZR64566 8 39247098 39386952 139855 Gain 3 0.90667 76 1864 chas 100 Gain 100 Gain 98.06 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400996MC male "research_filter, clinical_filter" TDCE32526 8 39247098 39386952 139855 Loss 0 0.98057 76 1864 chas 100 Loss 100 Loss 93.96 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400583HS male "research_filter, clinical_filter" VDRD32700 8 39247098 39386952 139855 Loss 0 0.984346 76 1864 chas 100 Loss 100 Loss 57.95 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400271SR male "research_filter, clinical_filter" QVOH35939 8 39247098 39386952 139855 Loss 0 0.985855 76 1864 chas 100 Loss 100 Loss 80.29 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" FSLR52955 8 39247098 39386952 139855 Gain 4 0.923909 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" WGSV83254 8 39247098 39386952 139855 Gain 3 0.918195 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" DEXW71048 8 39247098 39386952 139855 Gain 4 0.927845 76 1864 chas 100 Gain 84.97 Gain 82.74 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400833BB male "research_filter, clinical_filter" INSC49339 8 39247098 39386952 139855 Gain 3 0.909942 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" BTMS28214 8 39247098 39386952 139855 Gain 4 0.929389 76 1864 chas 100 Gain 100 Gain 96.38 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" AEUU95723 8 39247098 39386952 139855 Gain 3 0.924726 76 1864 chas 100 Gain 100 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402073LQ male "research_filter, clinical_filter" FGIX67905 8 39247098 39386952 139855 Loss 0 0.985927 76 1864 chas 100 Loss 100 Loss 60.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401391PJ male "research_filter, clinical_filter" RAQB29487 8 39247098 39386952 139855 Gain 4 0.93045 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401746WW male "research_filter, clinical_filter" OULL87238 8 39247098 39386952 139855 Gain 4 0.936507 76 1864 chas 97.98 Gain 96.38 Gain 96.38 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" HAAE15834 8 39247098 39386952 139855 Gain 4 0.923748 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" XZCA75295 8 39247098 39386952 139855 Loss 0 0.980669 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400033KC female "research_filter, clinical_filter" EHXC97365 8 39247098 39386952 139855 Gain 4 0.929633 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" ZKED26020 8 39247098 39386952 139855 Gain 4 0.939064 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" QRST17911 8 39247098 39386952 139855 Gain 4 0.944809 76 1864 chas 97.98 Gain 98.26 Gain 94.71 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401016IT male "research_filter, clinical_filter" YDHD10968 8 39247098 39386952 139855 Gain 4 0.928775 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401355CD male "research_filter, clinical_filter" ABWI37104 8 39247098 39386952 139855 Loss 0 0.982216 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401200BD male "research_filter, clinical_filter" ZGTI52802 8 39247098 39386952 139855 Loss 0 0.977824 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" WMOD47474 8 39247098 39386952 139855 Gain 4 0.92606 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" YEVU55281 8 39247098 39386952 139855 Gain 4 0.935298 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401453OL male "research_filter, clinical_filter" NKNM36178 8 39247098 39386952 139855 Gain 3 0.921567 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400668TD male "research_filter, clinical_filter" UYUQ10460 8 39247098 39386952 139855 Gain 4 0.927136 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400971MK female "research_filter, clinical_filter" WFGA96432 8 39247098 39386952 139855 Gain 4 0.936129 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401493HC male "research_filter, clinical_filter" ZWJR15881 8 39247098 39386952 139855 Loss 0 0.975923 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" SBJN54268 8 39247098 39386952 139855 Loss 1 0.963854 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" TNZB91328 8 39247098 39386952 139855 Gain 4 0.936725 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400911GA female "research_filter, clinical_filter" KQIO31508 8 39247098 39386952 139855 Gain 4 0.93349 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400507VD male "research_filter, clinical_filter" WTDT99871 8 39247098 39386952 139855 Loss 0 0.975302 76 1864 chas 100 Loss 100 Loss 85.96 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401505WI male "research_filter, clinical_filter" LCVR91256 8 39247098 39386952 139855 Gain 3 0.905997 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401510DG male "research_filter, clinical_filter" DQHB62647 8 39247098 39386952 139855 Loss 0 0.980809 76 1864 chas 100 Loss 100 Loss 86.23 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401732HW male "research_filter, clinical_filter" IDTW13637 8 39247098 39386952 139855 Gain 4 0.92242 76 1864 chas 100 Gain 100 Gain 82.34 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" UHFE12130 8 39247098 39386952 139855 Loss 0 0.968257 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401198TI female "research_filter, clinical_filter" XNCW62958 8 39247098 39386952 139855 Loss 0 0.976306 76 1864 chas 100 Loss 100 Loss 96.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" JTMA20495 8 39247098 39386952 139855 Gain 4 0.934321 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" JFDL89779 8 39247098 39386952 139855 Gain 4 0.924607 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401526WB male "research_filter, clinical_filter" EGVC41637 8 39247098 39386952 139855 Loss 0 0.980716 76 1864 chas 100 Loss 100 Loss 78.83 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401939GD male "research_filter, clinical_filter" TDDJ68763 8 39247098 39386952 139855 Loss 0 0.981513 76 1864 chas 100 Loss 100 Loss 97.38 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401250WD female "research_filter, clinical_filter" PDHC59420 8 39247098 39386952 139855 Loss 0 0.976798 76 1864 chas 100 Loss 100 Loss 88.58 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" VIXQ67410 8 39247098 39386952 139855 Loss 0 0.975172 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" MLXC26947 8 39247098 39386952 139855 Loss 0 0.963866 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" PTGD86385 8 39247098 39386952 139855 Gain 4 0.934071 76 1864 chas 97.98 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" LCWB88916 8 39247098 39386952 139855 Gain 3 0.906475 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401725MR male "research_filter, clinical_filter" TRVK84587 8 39247098 39386952 139855 Gain 3 0.905542 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401288LD male "research_filter, clinical_filter" QEPL68818 8 39247098 39386952 139855 Gain 3 0.915009 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402028BD male "research_filter, clinical_filter" PCSL59179 8 39247098 39386952 139855 Gain 3 0.914017 76 1864 chas 97.98 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401879HJ male "research_filter, clinical_filter" KKRR12131 8 39247098 39386952 139855 Gain 3 0.907358 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" QRSF74396 8 39247098 39386952 139855 Gain 4 0.927523 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401500OM male "research_filter, clinical_filter" DOIH36842 8 39247098 39386952 139855 Gain 4 0.942175 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" WYNE83745 8 39247098 39386952 139855 Gain 4 0.939685 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401844ZD male "research_filter, clinical_filter" AVJL63299 8 39247098 39386952 139855 Loss 0 0.974043 76 1864 chas 100 Loss 100 Loss 95.22 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" OWVL37831 8 39247098 39386952 139855 Gain 4 0.9341 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400770MA female "research_filter, clinical_filter" IORF34772 8 39247098 39386952 139855 Gain 4 0.939943 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" DLYI64271 8 39247098 39386952 139855 Loss 0 0.970106 76 1864 chas 100 Loss 100 Loss 88.12 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401292ER female "research_filter, clinical_filter" FIIC23299 8 39247098 39386952 139855 Loss 0 0.96639 76 1864 chas 100 Loss 100 Loss 97.39 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400843FL female "research_filter, clinical_filter" TUPR75049 8 39247098 39386952 139855 Gain 4 0.931814 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" CETD95374 8 39247098 39386952 139855 Gain 4 0.921558 76 1864 chas 100 Gain 84.97 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401331LJ female "research_filter, clinical_filter" FPLE23103 8 39247098 39386952 139855 Gain 3 0.907224 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" OUKT23649 8 39247098 39386952 139855 Loss 0 0.976489 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400450FG male "research_filter, clinical_filter" QMDZ51984 8 39247098 39386952 139855 Gain 3 0.915849 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401979TB male "research_filter, clinical_filter" PNEQ37885 8 39247098 39386952 139855 Gain 4 0.922493 76 1864 chas 100 Gain 89.74 Gain 87.41 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" FPUC66465 8 39247098 39386952 139855 Gain 3 0.911455 76 1864 chas 100 Gain 100 Gain 98.06 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400827MM male "research_filter, clinical_filter" MQVK42355 8 39247098 39386952 139855 Gain 3 0.918592 76 1864 chas 100 Gain 100 Gain 98.26 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401203MP female "research_filter, clinical_filter" KTQJ52506 8 39247098 39386952 139855 Gain 4 0.916183 76 1864 chas 100 Gain 87.42 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400218WK female "research_filter, clinical_filter" DUXB26784 8 39247098 39386952 139855 Gain 4 0.925408 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401519SA female "research_filter, clinical_filter" DMKI43381 8 39247098 39386952 139855 Loss 0 0.982783 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" CORE80412 8 39247098 39386952 139855 Gain 4 0.933545 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400581VJ female "research_filter, clinical_filter" ROFY65487 8 39247098 39386952 139855 Gain 4 0.936983 76 1864 chas 100 Gain 100 Gain 89.74 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400683EC female "research_filter, clinical_filter" GUYS21436 8 39247098 39386952 139855 Gain 4 0.94112 76 1864 chas 100 Gain 98.26 Gain 98.06 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400582WS female "research_filter, clinical_filter" VBEF49630 8 39247098 39386952 139855 Gain 4 0.923334 76 1864 chas 100 Gain 100 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" UCQK65306 8 39247098 39386952 139855 Gain 4 0.943555 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" YKER13969 8 39247098 39386952 139855 Gain 4 0.941001 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401372RR male "research_filter, clinical_filter" JPEZ22320 8 39247098 39386952 139855 Gain 4 0.938767 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" OTMU34006 8 39247098 39386952 139855 Gain 4 0.945682 76 1864 chas 100 Gain 89.74 Gain 89.74 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402038MR male "research_filter, clinical_filter" YZPM76095 8 39247098 39386952 139855 Gain 4 0.924437 76 1864 chas 100 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401841OB male "research_filter, clinical_filter" TUOI10912 8 39247098 39386952 139855 Gain 4 0.939572 76 1864 chas 100 Gain 84.97 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" PAFA79672 8 39247098 39386952 139855 Gain 4 0.921427 76 1864 chas 100 Gain 84.97 Gain 84.97 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402033WD male "research_filter, clinical_filter" UWAE35667 8 39247098 39386952 139855 Loss 0 0.973745 76 1864 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" KSUK43841 8 39247098 39386952 139855 Loss 0 0.972388 76 1864 chas 0 - 100 Loss 100 Loss #NAME? 57 NA NA NA "ChAS,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "139855(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 57 - 0 "139855(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401762SD male "research_filter, clinical_filter" ROCO41006 15 55562627 55702468 139842 Gain 3 0.883888 88 1607 chas 55.74 Gain 100 Gain 100 Gain GainGainGain 46 NA NA NA "ChAS,IPN,NXS,PTK" 15q21.3 - "RAB27A,PIGB,FLJ27352,MIR628,DYX1C1-CCPG1,CCPG1" 6 "RAB27A,PIGB,FLJ27352,MIR628,DYX1C1-CCPG1,CCPG1" 6 RAB27A - - "1790(3|Park(2010),Conrad(2009),Ahn(2009))" - 3 46 - 0 "56894(16|Park(2010),Conrad(2009),Ahn(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" SBTA40047 11 48709715 48849435 139721 Loss 1 0.903776 36 3992 chas 0 - 55.13 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" "11p11.12,11p11.2" - - 0 - 0 - - - "139721(14|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Wang(2008),McKernan(2009),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009),McCarroll(2008))" 173(2|Levy(2007)) - 50 - 0 "139721(208|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wang(2008),Wilson(2010),Pinto(2007),Cooper(2008),Pinto(2011),Redon(2006),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401628GC female "research_filter, clinical_filter" JYCC50302 3 27724925 27864538 139614 Gain 3 0.90789 108 1304 chas 98.42 Gain 99.99 Gain 99.24 Gain GainGainGain 90 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.1 - EOMES 1 EOMES 1 - - - 1400(1|McKernan(2009)) 385(1|Bentley(2008)) - 90 - 0 "139614(16|Teague(2010),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" FPUC66465 12 98105876 98245210 139335 Gain 3 0.89646 112 1255 chas 91.9 Gain 99.35 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q23.1 - - 0 - 0 - - - 1171(1|Wang(2008)) 1(1|Levy(2007)) - 112 - 0 "139335(13|Redon(2006),Wang(2008),Durbin(2010),Kidd(2008),Perry(2008b),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400827MM male "research_filter, clinical_filter" YWQF89241 X 8254623 8393904 139282 Gain 3 0.912605 212 660 chas 99.58 Gain 0 - 0 - Gain-- 142 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - - - "139282(4|Pinto(2007),Zogopoulos(2007))" - - 142 - 0 "139282(8|Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" ZRAK81940 X 8254623 8393904 139282 Gain 3 0.91065 212 660 chas 99.58 Gain 0 - 0 - Gain-- 142 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - - - "139282(4|Pinto(2007),Zogopoulos(2007))" - - 142 - 0 "139282(8|Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401864CV female "research_filter, clinical_filter" BGWX92658 X 8254623 8393904 139282 Gain 2 0.940235 212 660 chas 100 Gain 0 - 0 - Gain-- 142 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - - - "139282(4|Pinto(2007),Zogopoulos(2007))" - - 142 - 0 "139282(8|Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401566DD male "research_filter, clinical_filter" YPPO84595 X 8254623 8393904 139282 Gain 2 0.931016 212 660 chas 100 Gain 0 - 0 - Gain-- 142 NA NA NA "ChAS,IPN" Xp22.31 - - 0 - 0 - - - "139282(4|Pinto(2007),Zogopoulos(2007))" - - 142 - 0 "139282(8|Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" XKMM87171 10 135233390 135372601 139212 Gain 3 0.884652 236 592 chas 54.6 Gain 23.05 Gain 100 Gain GainGainGain 113 93.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "139212(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "139212(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400634MP male "research_filter, clinical_filter" FXID76383 10 135233390 135372601 139212 Gain 3 0.897242 236 592 chas 68.77 Gain 77.33 Gain 90.98 Gain GainGainGain 113 93.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "139212(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "139212(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" ZDRZ89201 10 135233390 135372601 139212 Gain 3 0.897273 236 592 chas 71.7 Gain 96.36 Gain 96.36 Gain GainGainGain 113 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "139212(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "139212(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401855RE male "research_filter, clinical_filter" NYDB63609 12 85906037 86045124 139088 Loss 1 0.912061 108 1299 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 83 99.97 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.31 - - 0 - 0 - - - "139088(4|McKernan(2009),Pinto(2007),Shaikh(2009))" - - 83 - 0 "139088(11|Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400138LA female "research_filter, clinical_filter" JTMA20495 7 26062396 26201464 139069 Gain 3 0.891669 84 1675 chas 85.31 Gain 85.45 Gain 0 - GainGain- 79 NA NA NA "ChAS,IPN,NXS" 7p15.2 - NFE2L3 1 NFE2L3 1 - - - "36851(14|Conrad(2009),Matsuzaki(2009),Ju(2010),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Kim(2009))" - - 79 - 0 "139069(92|Teague(2010),Jakobsson(2008),Ju(2010),Kidd(2010b),Itsara(2009),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Park(2010),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" MLUO94199 10 46996744 47135671 138928 Loss 1 0.85315 178 784 chas 0 - 0 - 100 Loss #NAME? 127 50.96 Loss GTC "ChAS,PTK" 10q11.22 - "GPRIN2,LOC728643,LOC643650,PPYR1" 4 "GPRIN2,LOC728643,LOC643650,PPYR1" 4 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "138928(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 127 - 0 "138928(238|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" WCSO50334 10 135233751 135372601 138851 Gain 3 0.900717 234 595 chas 60.73 Gain 93.35 Gain 93.47 Gain GainGainGain 113 93.43 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "138851(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "138851(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400073HT male "research_filter, clinical_filter" IWPA56866 2 52599360 52738189 138830 Loss 1 0.937227 108 1297 chas 100 Loss 100 Loss 100 Loss LossLossLoss 116 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - 1064(1|Park(2010)) - - 116 - 0 "138830(12|Wong(2007),Redon(2006),Pinto(2011),Levy(2007),Durbin(2010),Kidd(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401700BN_1 female "research_filter, clinical_filter" TAVH54072 X 58326434 58465151 138718 Loss 1 0.915022 24 6031 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS Xp11.1 - - 0 - 0 - - - "138718(5|McCarroll(2005),Wang(2007),Matsuzaki(2009))" 173(1|Levy(2007)) - 17 - 0 "24111(5|Wang(2007),Levy(2007),McCarroll(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400948EV female - RWTQ90156 10 45411453 45550145 138693 Gain 3 0.906894 152 918 chas 98.66 Gain 99.33 Gain 99.36 Gain GainGainGain 107 97.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.21 - "C10orf10,TMEM72-AS1,RASSF4,ZNF22,TMEM72,C10orf25" 6 "C10orf10,TMEM72-AS1,RASSF4,ZNF22,TMEM72,C10orf25" 6 - - - "13795(5|Wang(2007),Pinto(2007),Matsuzaki(2009))" "1215(3|Wheeler(2008),Matsuzaki(2009))" - 107 - 0 "138693(20|Itsara(2009),Wang(2007),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" ZYKC24489 8 39248308 39386952 138645 Loss 0 0.973573 74 1899 chas 100 Loss 100 Loss 100 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "138645(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 56 - 0 "138645(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" UEII10946 8 39248308 39386952 138645 Loss 1 0.952349 74 1899 chas 100 Loss 100 Loss 100 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "138645(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 56 - 0 "138645(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401913GT male "research_filter, clinical_filter" XCWR96625 8 39248308 39386952 138645 Gain 4 0.926119 74 1899 chas 100 Gain 100 Gain 100 Gain GainGainGain 56 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "138645(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 56 - 0 "138645(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400158FB male "research_filter, clinical_filter" KGCF91244 10 135234127 135372601 138475 Gain 3 0.907539 232 599 chas 86.18 Gain 96.87 Gain 96.87 Gain GainGainGain 113 93.68 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "138475(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "138475(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" UBKP24592 10 135234127 135372601 138475 Gain 3 0.90091 232 599 chas 86.36 Gain 69.32 Gain 96.87 Gain GainGainGain 113 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 "SYCE1,SPRN,LOC619207,CYP2E1,MTG1" 5 - - - "138475(79|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "4196(13|Conrad(2009),Levy(2007),Wheeler(2008),Matsuzaki(2009),Ju(2010))" 13 113 - 0 "138475(166|Ju(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Kim(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401513KC male "research_filter, clinical_filter" NUMT67226 8 39247098 39385181 138084 Gain 4 0.922439 75 1866 chas 100 Gain 100 Gain 100 Gain GainGainGain 56 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "138084(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 56 - 0 "138084(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401079HJ female "research_filter, clinical_filter" MLXC26947 14 22338026 22476034 138009 Gain 3 0.90214 160 867 chas 70.05 Gain 99.95 Gain 100 Gain GainGainGain 146 NA NA NA "ChAS,IPN,NXS,PTK" 14q11.2 - - 0 - 0 - - - "138009(9|Conrad(2009),Ahn(2009),Redon(2006),Levy(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" "1443(2|Park(2010),Conrad(2009))" - 146 - 0 "138009(40|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Pinto(2011),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" OOYJ75103 12 31269114 31407111 137998 Gain 3 0.903525 54 2603 chas 27 Gain 57.02 Gain 0 - GainGain- 93 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "137998(54|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 63 92 - 0 "137998(195|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401672FD female "research_filter, clinical_filter" DJYF53115 12 31269114 31407111 137998 Gain 3 0.904353 54 2603 chas 33.93 Gain 100 Gain 91.1 Gain GainGainGain 93 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "137998(54|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Shaikh(2009),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "951(8|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009),Bentley(2008))" 63 92 - 0 "137998(195|Teague(2010),Redon(2006),Conrad(2009),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401184MM male "research_filter, clinical_filter" NKFT59098 11 81470541 81608444 137904 Loss 1 0.916156 140 992 chas 90.91 Loss 97.53 Loss 97.53 Loss LossLossLoss 125 90.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q14.1 - MIR4300 1 MIR4300 1 - - - "137904(32|Wang(2007),McKernan(2009),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1648(4|Ahn(2009),Bentley(2008),Perry(2008),Mills(2006))" - 125 - 0 "137904(207|Conrad(2009),Ahn(2009),McKernan(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Campbell(2011),Pinto(2011),Jakobsson(2008),Mills(2006),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400012CJ female "research_filter, clinical_filter" FEZX98083 8 39247098 39384956 137859 Loss 0 0.982784 74 1888 chas 100 Loss 90.11 Loss 68.46 Loss LossLossLoss 55 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" GTRU40344 8 39247098 39384956 137859 Loss 0 0.977147 74 1888 chas 100 Loss 100 Loss 81.13 Loss LossLossLoss 55 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400134WK_1 male "research_filter, clinical_filter" TTBC76525 8 39247098 39384956 137859 Loss 0 0.976359 74 1888 chas 100 Loss 100 Loss 77.84 Loss LossLossLoss 55 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400371GA female "research_filter, clinical_filter" GWRR97762 8 39247098 39384956 137859 Loss 0 0.983071 74 1888 chas 100 Loss 100 Loss 85.29 Loss LossLossLoss 55 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" TMXA54308 8 39247098 39384956 137859 Gain 3 0.915998 74 1888 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" GWFO72077 8 39247098 39384956 137859 Loss 0 0.977193 74 1888 chas 100 Loss 100 Loss 59.33 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" YTOE66394 8 39247098 39384956 137859 Loss 0 0.971946 74 1888 chas 100 Loss 100 Loss 100 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" JILG60414 8 39247098 39384956 137859 Loss 0 0.977205 74 1888 chas 100 Loss 100 Loss 78.14 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400278PD male "research_filter, clinical_filter" TGEI86896 8 39247098 39384956 137859 Loss 0 0.982517 74 1888 chas 100 Loss 100 Loss 78.02 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137859(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "137859(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401742KB male "research_filter, clinical_filter" TGEI86896 9 6607725 6745550 137826 Gain 3 0.905301 160 866 chas 53.54 Gain 94.88 Gain 94.91 Gain GainGainGain 127 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.1 - "KDM4C,GLDC" 2 "KDM4C,GLDC" 2 GLDC - - "137826(23|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),Shaikh(2009),McCarroll(2008))" "1049(7|Wang(2007),Levy(2007),Ju(2010),Shaikh(2009),Conrad(2009))" 1 127 - 0 "137826(93|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401742KB male "research_filter, clinical_filter" SUUF34898 16 28689086 28826857 137772 Loss 1 0.874212 24 5990 chas 0 - 0 - 0 - --- 8 0 - - ChAS 16p11.2 - "EIF3CL,EIF3C" 2 "EIF3CL,EIF3C" 2 - "137772#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" - "133350(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Pang(2010),Kidd(2008),Cooper(2008))" 848(1|Perry(2008)) 97 8 - 0 "137772(37|Conrad(2009),Redon(2006),Perry(2008),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),Cooper(2008),Pinto(2011),Ju(2010))" FALSE TRUE ipn_no algo_no affy6_no 400669LD male - SNEF27582 21 37481900 37619534 137635 Gain 3 0.913527 144 962 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 102 99.95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q22.12 - "LOC100133286,LOC100506428,DOPEY2,CBR3" 4 "LOC100133286,LOC100506428,DOPEY2,CBR3" 4 - - - "137635(7|de Smith(2007),McKernan(2009),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" "618(2|de Smith(2007),Levy(2007))" 1 102 - 0 "131669(11|Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" ZRRL85494 8 39247098 39384687 137590 Gain 3 0.905482 73 1910 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137590(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137590(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" ISXJ62958 6 63513337 63650892 137556 Loss 1 0.917919 72 1937 chas 96.08 Loss 98.04 Loss 98.04 Loss LossLossLoss 63 98.69 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q12 - - 0 - 0 - - - "137556(13|Sebat(2004),Perry(2008),Matsuzaki(2009),Conrad(2009),Park(2010),Kim(2009))" "723(3|Levy(2007),McKernan(2009),Mills(2006))" - 63 - 0 "137556(51|Sebat(2004),Jakobsson(2008),Perry(2008),Teague(2010),McKernan(2009),Durbin(2010),Park(2010),Wilson(2010),Pinto(2011),Kim(2009),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" NVMX58254 6 140522827 140660269 137443 Loss 1 0.918656 68 2051 chas 84.7 Loss 92.34 Loss 92.35 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 6q24.1 - MIR3668 1 MIR3668 1 - - - - - - 53 - 0 "107405(5|Pinto(2011),Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 402060PD female "research_filter, clinical_filter" YSDD20509 3 35803762 35941198 137437 Gain 3 0.902981 92 1510 chas 100 Gain 100 Gain 100 Gain GainGainGain 81 NA NA NA "ChAS,IPN,NXS,PTK" 3p22.3 - ARPP21 1 ARPP21 1 - - - "137437(5|Itsara(2009),Gusev(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 81 - 0 "137437(14|Itsara(2009),Gusev(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" VAOW46427 8 39247098 39384337 137240 Gain 3 0.89425 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" MTRE48443 8 39247098 39384337 137240 Gain 3 0.900311 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400378HL female "research_filter, clinical_filter" SNEF27582 8 39247098 39384337 137240 Gain 4 0.919629 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" WMQY51169 8 39247098 39384337 137240 Gain 3 0.896668 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400364SS male "research_filter, clinical_filter" VPWL90389 8 39247098 39384337 137240 Gain 4 0.928219 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" TZGC22320 8 39247098 39384337 137240 Gain 3 0.905878 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401295HB male "research_filter, clinical_filter" GNXG93257 8 39247098 39384337 137240 Gain 4 0.924446 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" SUUF34898 8 39247098 39384337 137240 Loss 0 0.975061 72 1932 chas 100 Loss 100 Loss 100 Loss LossLossLoss 54 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400669LD male "research_filter, clinical_filter" CHSN35204 8 39247098 39384337 137240 Gain 3 0.902237 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" UUAC53094 8 39247098 39384337 137240 Loss 1 0.975117 72 1932 chas 100 Loss 100 Loss 96.51 Loss LossLossLoss 54 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400849SH male "research_filter, clinical_filter" BYSK29073 8 39247098 39384337 137240 Gain 3 0.903157 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" ROAF64821 8 39247098 39384337 137240 Gain 3 0.905424 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" TTCB91135 8 39247098 39384337 137240 Gain 3 0.897936 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401376RD male "research_filter, clinical_filter" GHAL32977 8 39247098 39384337 137240 Gain 3 0.892777 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" YREU97751 8 39247098 39384337 137240 Gain 3 0.891126 72 1932 chas 100 Gain 100 Gain 86.58 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" YKSB12189 8 39247098 39384337 137240 Gain 3 0.912985 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401390DG male "research_filter, clinical_filter" NQMZ66306 8 39247098 39384337 137240 Gain 3 0.894117 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401801LA male "research_filter, clinical_filter" NSQR79941 8 39247098 39384337 137240 Gain 3 0.896381 72 1932 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401077VC female "research_filter, clinical_filter" DQOB10223 8 39247098 39384337 137240 Loss 0 0.965944 72 1932 chas 100 Loss 100 Loss 69.77 Loss LossLossLoss 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401567BD male "research_filter, clinical_filter" NBLH72263 8 39247098 39384337 137240 Loss 0 0.969116 72 1932 chas 100 Loss 100 Loss 87.67 Loss LossLossLoss 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401532LJ female "research_filter, clinical_filter" ZJPO23473 8 39247098 39384337 137240 Loss 0 0.969874 72 1932 chas 100 Loss 100 Loss 100 Loss LossLossLoss 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401173AI male "research_filter, clinical_filter" MWKR26526 8 39247098 39384337 137240 Loss 0 0.977038 72 1932 chas 100 Loss 100 Loss 91.85 Loss LossLossLoss 54 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400225CJ male "research_filter, clinical_filter" VRMG83827 8 39247098 39384337 137240 Loss 0 0.972227 72 1932 chas 0 - 100 Loss 72.52 Loss #NAME? 54 NA NA NA "ChAS,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137240(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137240(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401769CR male "research_filter, clinical_filter" XUEP99389 8 39247099 39384337 137239 Gain 3 0.896598 71 1960 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137239(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137239(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" TLUK35377 8 39247099 39384337 137239 Gain 4 0.926525 71 1960 chas 100 Gain 100 Gain 100 Gain GainGainGain 54 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "137239(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 54 - 0 "137239(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" FDGT59945 7 13108350 13245504 137155 Loss 1 0.908615 104 1331 chas 97.7 Loss 98.83 Loss 98.83 Loss LossLossLoss 123 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.3 - - 0 - 0 - - - "23706(11|Conrad(2009),Conrad(2005),Perry(2008),McKernan(2009),Altshuler(2010),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Shaikh(2009))" "876(7|Wang(2008),Bentley(2008))" - 123 - 0 "71204(36|Conrad(2009),Perry(2008),Wang(2008),Levy(2007),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Itsara(2009),Altshuler(2010),Campbell(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401475MK male "research_filter, clinical_filter" GXLR90543 8 5464349 5601325 136977 Loss 1 0.933319 150 919 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 222 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - - "136977(26|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" "914(2|Ahn(2009),Perry(2008))" - 222 - 0 "136977(113|Teague(2010),Redon(2006),Conrad(2009),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401330RR female "research_filter, clinical_filter" RBTV68848 14 45081100 45217989 136890 Loss 1 0.925567 100 1382 chas 95.12 Loss 97.56 Loss 97.56 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "136890(7|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009),Simon-Sanchez(2007))" - - 83 - 0 "136890(12|Redon(2006),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" UHIX56739 12 8070815 8207676 136862 Gain 3 0.894713 100 1382 chas 95.21 Gain 97.61 Gain 0 - GainGain- 66 95.21 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p13.31 - "FOXJ2,SLC2A3" 2 "FOXJ2,SLC2A3" 2 - - - "136862(42|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1263(2|Wang(2008),Levy(2007))" 11 66 - 0 "136862(154|Conrad(2009),McKernan(2009),Redon(2006),Wang(2007),Itsara(2009),Levy(2007),Altshuler(2010),Wang(2008),Durbin(2010),Gusev(2009),Wilson(2010),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401040KM female "research_filter, clinical_filter" CVYW15790 2 26663718 26800520 136803 Loss 1 0.914894 144 956 chas 95.91 Loss 95.87 Loss 97.95 Loss LossLossLoss 98 NA NA NA "ChAS,IPN,NXS,PTK" 2p23.3 - "C2orf70,OTOF,CCDC164" 3 "C2orf70,OTOF,CCDC164" 3 OTOF - - "136803(3|de Smith(2007),Wang(2007),Kim(2009))" - - 98 - 0 "136803(13|Wang(2007),Itsara(2009),Durbin(2010),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" WYBU35088 8 39250166 39386952 136787 Gain 3 0.898471 72 1926 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "136787(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "136787(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400579HJ female "research_filter, clinical_filter" AZMC27188 8 39250166 39386952 136787 Gain 3 0.903423 72 1926 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "136787(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "136787(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" CBBY76424 8 39250166 39386952 136787 Gain 4 0.925412 72 1926 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "136787(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 55 - 0 "136787(257|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401927SK female "research_filter, clinical_filter" HXWA61262 14 106530534 106667115 136582 Loss 0 0.947133 17 8536 chas 22.29 Loss 23.66 Loss 15.3 Loss LossLossLoss 65 26.77 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136582(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136582(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401438HT male research_filter NZSQ74406 14 106530534 106667115 136582 Loss 0 0.944057 17 8536 chas 22.29 Loss 28.34 Loss 19.82 Loss LossLossLoss 65 26.77 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136582(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136582(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male research_filter WBPB92916 14 106530534 106667115 136582 Loss 0 0.952178 17 8536 chas 22.29 Loss 28.34 Loss 23.66 Loss LossLossLoss 65 26.77 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136582(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136582(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401210PB male research_filter AGBJ55549 14 106530534 106667115 136582 Loss 0 0.961967 17 8536 chas 22.29 Loss 28.34 Loss 15.3 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136582(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136582(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402016HZ male research_filter JSXF59945 2 98025640 98162176 136537 Loss 1 0.914178 20 7186 chas 72.37 Loss 0 - 0 - Loss-- 13 15.35 Loss BS "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female research_filter QGND60775 2 98025640 98162176 136537 Loss 1 0.899715 20 7186 chas 72.37 Loss 24.73 Loss 24.73 Loss LossLossLoss 13 15.35 Loss BS "ChAS,IPN,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401085LA_1 female research_filter ZKDO15212 2 98025640 98162176 136537 Loss 1 0.897016 20 7186 chas 72.37 Loss 0 - 0 - Loss-- 13 15.7 Loss "BS,IP6" "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400361HC female research_filter PYJA98100 2 98025640 98162176 136537 Loss 1 0.890305 20 7186 chas 0 - 16.09 Loss 66.43 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401981GF female research_filter AXWL27269 2 98025640 98162176 136537 Loss 1 0.910288 20 7186 chas 0 - 24.8 Loss 73.82 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401962BK female research_filter DEXW71048 2 98025640 98162176 136537 Loss 1 0.911902 20 7186 chas 0 - 24.8 Loss 73.82 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400833BB male research_filter PNEQ37885 2 98025640 98162176 136537 Loss 1 0.895724 20 7186 chas 0 - 17.32 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401781SL male research_filter MQVK42355 2 98025640 98162176 136537 Loss 1 0.893133 20 7186 chas 0 - 17.32 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401203MP female research_filter DUXB26784 2 98025640 98162176 136537 Loss 1 0.898488 20 7186 chas 0 - 32.16 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401519SA female research_filter WXKO33327 2 98025640 98162176 136537 Loss 1 0.902406 20 7186 chas 0 - 24.8 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400496BL female research_filter FCIS19557 2 98025640 98162176 136537 Loss 1 0.88725 20 7186 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401931JL female - IDKP47812 2 98025640 98162176 136537 Loss 1 0.882702 20 7186 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401377MA male - SBTA40047 2 98025640 98162176 136537 Loss 1 0.883492 20 7186 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401628GC female - YKER13969 2 98025640 98162176 136537 Loss 1 0.89824 20 7186 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401372RR male - UWAE35667 2 98025640 98162176 136537 Loss 1 0.895356 20 7186 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401861GG male - VRGJ17464 2 98025640 98162176 136537 Gain 4 0.928373 20 7186 chas 12.22 Gain 73.82 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401914PR male research_filter TPDE39419 2 98025640 98162176 136537 Gain 4 0.921376 20 7186 chas 12.22 Gain 73.82 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401369GR male research_filter IREV30826 2 98025640 98162176 136537 Gain 4 0.921119 20 7186 chas 17.23 Gain 17.4 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401413RG male research_filter NUMT67226 2 98025640 98162176 136537 Gain 3 0.913347 20 7186 chas 17.24 Gain 16.26 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401079HJ female research_filter NINK42890 2 98025640 98162176 136537 Gain 3 0.907155 20 7186 chas 17.23 Gain 17.4 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401611CD male research_filter FRXS36515 2 98025640 98162176 136537 Gain 3 0.911918 20 7186 chas 14.34 Gain 21.79 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400769SL female research_filter AGBJ55549 2 98025640 98162176 136537 Gain 3 0.919202 20 7186 chas 17.23 Gain 24.73 Gain 0 - GainGain- 13 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 402016HZ male research_filter EHLK43437 2 98025640 98162176 136537 Gain 3 0.921723 20 7186 chas 0 - 16.34 Gain 0 - -Gain- 13 15.7 Gain IP6 "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401192MJ male research_filter WUVU37744 2 98025640 98162176 136537 Gain 3 0.908868 20 7186 chas 0 - 24.8 Gain 0 - -Gain- 13 15.7 Gain IP6 "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401763SG male research_filter FISX28606 2 98025640 98162176 136537 Gain 3 0.909691 20 7186 chas 0 - 24.73 Gain 0 - -Gain- 13 0 - - "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_no 400677HD male research_filter UBHC61833 2 98025640 98162176 136537 Gain 3 0.917108 20 7186 chas 0 - 73.82 Gain 0 - -Gain- 13 15.7 Gain IP6 "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400768MN female research_filter ZCOM63077 2 98025640 98162176 136537 Gain 4 0.929806 20 7186 chas 0 - 66.43 Gain 0 - -Gain- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401936BA male research_filter WMBQ46007 2 98025640 98162176 136537 Gain 4 0.924469 20 7186 chas 0 - 24.8 Gain 0 - -Gain- 13 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401230NL female research_filter IGQR94047 2 98025640 98162176 136537 Gain 3 0.91769 20 7186 chas 0 - 0 - 0 - --- 13 0 - - ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136537(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 13 - 0 "136537(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400060MC female - RXUT32164 15 87733835 87870343 136509 Loss 1 0.900787 100 1378 chas 100 Loss 100 Loss 100 Loss LossLossLoss 106 NA NA NA "ChAS,IPN,NXS,PTK" 15q25.3 - - 0 - 0 - - - "108529(8|Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 106 - 0 "123182(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401813DN female "research_filter, clinical_filter" CWGV78054 14 106530534 106667035 136502 Loss 0 0.956853 16 9100 chas 22.3 Loss 23.67 Loss 15.31 Loss LossLossLoss 65 22.64 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136502(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136502(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400599CP female research_filter GZBA26596 14 106530534 106667035 136502 Loss 0 0.954025 16 9100 chas 22.3 Loss 28.36 Loss 23.67 Loss LossLossLoss 65 26.79 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "136502(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 65 65 - 0 "136502(341|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400150SS female research_filter ZRRL85494 1 223721316 223857726 136411 Gain 3 0.914822 40 3497 chas 42.76 Gain 36.66 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 1q41 50001(1|clone) CAPN8 1 CAPN8 1 - - - "17118(4|Gusev(2009),Ju(2010),Matsuzaki(2009),Conrad(2009))" "676(2|Levy(2007),Bentley(2008))" 16 33 - 0 "136411(19|Conrad(2009),Wong(2007),Ju(2010),Levy(2007),Durbin(2010),Bentley(2008),Gusev(2009),Pinto(2011))" FALSE TRUE ipn_yes algo_yes NA 400043HC female research_filter TJGR62389 14 106849677 106985955 136279 Gain 3 0.898447 81 1703 chas 69.82 Gain 86.88 Gain 100 Gain GainGainGain 101 96.11 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "136279(74|Sebat(2004),Shaikh(2009),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Cooper(2008),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 19 100 - 0 "136279(291|Conrad(2009),Ahn(2009),Korbel(2007),Bentley(2008),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Cooper(2008),Sebat(2004),Campbell(2011),Park(2010),Simon-Sanchez(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" APBT44417 3 26034553 26170698 136146 Loss 1 0.92119 68 2032 chas 99.99 Loss 96.25 Loss 100 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.2 - - 0 - 0 - - - "124338(3|Wang(2007),Redon(2006),Shaikh(2009))" "303(4|Wang(2008),Wheeler(2008),Mills(2006))" - 70 - 0 "136146(17|Wang(2007),Wong(2007),Redon(2006),Wang(2008),Durbin(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400701MM female "research_filter, clinical_filter" TOTG24684 2 98025640 98161697 136058 Loss 1 0.901994 18 8003 chas 72.27 Loss 0 - 0 - Loss-- 12 15.4 Loss "BS,IP6" "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136058(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 12 - 0 "136058(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401764JJ male research_filter LELT20618 2 98025640 98161697 136058 Loss 1 0.881619 18 8003 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136058(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 12 - 0 "136058(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400211BJ female - KTQJ52506 2 98025640 98161697 136058 Loss 1 0.886117 18 8003 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "136058(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "1425(3|Conrad(2009),Perry(2008))" 100 12 - 0 "136058(57|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400218WK female - VOUF55858 19 20829413 20965418 136006 Gain 3 0.882688 126 1088 chas 34.63 Gain 100 Gain 0 - GainGain- 87 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19p12 - ZNF626 1 ZNF626 1 - - "54741(4|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "136006(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - 46 87 - 0 "136006(22|Ahn(2009),Korbel(2007),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400338SR male "research_filter, clinical_filter" VVRJ19010 X 47865295 48001282 135988 Loss 0 0.976317 98 1401 chas 83.12 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "135988(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 46 85 - 0 "135988(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" MWKR26526 1 196741104 196877037 135934 Loss 1 0.914131 64 2157 chas 35.6 Loss 87.13 Loss 99.72 Loss LossLossLoss 138 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.3 - "CFHR3,CFHR1,CFHR4" 3 "CFHR3,CFHR1,CFHR4" 3 "CFHR3,CFHR1" - - "135934(63|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Wang(2008),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Jakobsson(2008),McKernan(2009),Wheeler(2008),Conrad(2005),Perry(2008),Itsara(2009),Altshuler(2010),Park(2010))" "743(2|McCarroll(2005),Mills(2006))" 59 139 - 0 "135934(363|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400225CJ male "research_filter, clinical_filter" NFPW24786 1 144948777 145084526 135750 Gain 3 0.87159 206 662 chas 0 - 0 - 0 - --- 68 NA NA NA ChAS 1q21.1 - PDE4DIP 1 PDE4DIP 1 - - - "135750(17|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Kidd(2008),Park(2010),Ju(2010),Kim(2009))" "2287(10|Pang(2010),Wheeler(2008),McKernan(2009),Ahn(2009),Bentley(2008))" 27 68 - 0 "135750(135|Teague(2010),Korbel(2007),Ju(2010),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401432SB male clinical_filter VXMJ58338 19 2546008 2681564 135557 Gain 3 0.885661 80 1715 chas 45.93 Gain 74.59 Gain 0 - GainGain- 54 NA NA NA "ChAS,IPN,NXS" 19p13.3 - GNG7 1 GNG7 1 - - - - 618(3|Levy(2007)) - 54 - 0 "135557(21|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" DMKI43381 1 46393755 46529164 135410 Gain 3 0.89957 172 791 chas 90.73 Gain 95.52 Gain 95.52 Gain GainGainGain 81 NA NA NA "ChAS,IPN,NXS,PTK" 1p34.1 - "MAST2,PIK3R3" 2 "MAST2,PIK3R3" 2 - - - 9377(2|Shaikh(2009)) - - 81 - 0 "112670(9|Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" WUMM65746 9 11992010 12127088 135079 Loss 1 0.932465 99 1378 chas 94 Loss 96.93 Loss 96.94 Loss LossLossLoss 115 99.56 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "135079(35|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 114 - 0 "135079(54|Wang(2007),Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" SSWV37655 5 46242357 46377315 134959 Loss 1 0.894903 30 4653 chas 0 - 69.68 Loss 100 Loss #NAME? 28 NA NA NA "ChAS,NXS,PTK" 5p11 - - 0 - 0 - - - "134959(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "134959(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401706BJ female "research_filter, clinical_filter" KLXQ40405 14 106072251 106207205 134955 Loss 1 0.874874 23 6134 chas 0 - 36.43 Loss 41.9 Loss #NAME? 27 0 - - "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 34203(1|Kidd(2008)) "134955(60|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4116(13|Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 27 - 0 "134955(304|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wong(2007),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_no 400051MR_1 male research_filter OAGJ33866 14 106072251 106207205 134955 Loss 1 0.886999 23 6134 chas 0 - 0 - 0 - --- 27 NA NA NA ChAS 14q32.33 - - 0 - 0 - - 34203(1|Kidd(2008)) "134955(60|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4116(13|Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 27 - 0 "134955(304|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wong(2007),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401265CB male - NLDQ95097 7 62849387 62984309 134923 Loss 1 0.883773 16 8994 chas 0 - 0 - 0 - --- 10 0 - - ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400091BS female - ZKED26020 7 62849387 62984309 134923 Loss 1 0.896651 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401652HL female - DOIH36842 7 62849387 62984309 134923 Loss 1 0.889367 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401858TP male - JWHR52164 7 62849387 62984309 134923 Loss 1 0.88227 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400984LD female - LJOH21233 7 62849387 62984309 134923 Loss 1 0.882466 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400829MR male - JAVP94180 7 62849387 62984309 134923 Loss 1 0.882422 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401932GN female - XIWO60009 7 62849387 62984309 134923 Loss 1 0.877177 16 8994 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "134923(11|Conrad(2009),Pinto(2007),Redon(2006),Perry(2008),Ju(2010))" 291(1|Perry(2008)) 97 10 - 0 "134923(30|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402074RR female - YKLI59783 9 11992180 12127088 134909 Loss 1 0.924706 98 1390 chas 99.99 Loss 97.06 Loss 100 Loss LossLossLoss 114 99.69 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "134909(35|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 114 - 0 "134909(54|Wang(2007),Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" YAZD71442 7 53458840 53593618 134779 Loss 1 0.906751 72 1898 chas 92.25 Loss 92.35 Loss 93.34 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 7p12.1 - - 0 - 0 - - - "131411(12|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" - - 77 - 0 "131411(44|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" MGJR69521 17 36283807 36418529 134723 Loss 1 0.898934 34 4082 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "129034(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 5 - 0 "134723(158|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401251WN female clinical_filter MVJH83535 17 36283807 36418529 134723 Gain 3 0.894754 34 4082 chas 0 - 80.59 Gain 0 - -Gain- 5 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "129034(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 5 - 0 "134723(158|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401771OS male research_filter TAVH54072 17 36283807 36418529 134723 Gain 3 0.893555 34 4082 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "129034(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 5 - 0 "134723(158|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400948EV female - REUG17486 4 18802678 18937351 134674 Loss 1 0.937012 97 1402 chas 96.59 Loss 96.74 Loss 98.44 Loss LossLossLoss 90 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.31 - - 0 - 0 - - - - - - 90 - 0 27878(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" FPEA56091 7 53458840 53593511 134672 Loss 1 0.924834 71 1923 chas 92.32 Loss 96.23 Loss 96.23 Loss LossLossLoss 76 92.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p12.1 - - 0 - 0 - - - "131411(12|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Shaikh(2009),McCarroll(2008))" - - 76 - 0 "131411(44|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" YIUT48601 X 47865295 47999859 134565 Loss 1 0.913664 97 1401 chas 81.04 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "134565(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 46 85 - 0 "134565(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401274PA female "research_filter, clinical_filter" XROV61149 5 21850393 21984769 134377 Loss 1 0.91169 136 995 chas 99.72 Loss 99.95 Loss 100 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.3 - CDH12 1 CDH12 1 - - - "72495(15|Conrad(2009),McKernan(2009),Matsuzaki(2009),Perry(2008),Mills(2006))" "143(3|Pang(2010),Levy(2007),Bentley(2008))" 38 83 - 0 "134377(44|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Alkan(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Perry(2008b),Pinto(2011),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401480PG male "research_filter, clinical_filter" UBGH15538 14 51655248 51789428 134181 Gain 3 0.897818 140 965 chas 92.92 Gain 96.63 Gain 96.63 Gain GainGainGain 74 NA NA NA "ChAS,IPN,NXS,PTK" 14q22.1 - TMX1 1 TMX1 1 - - - - "1138(3|Conrad(2009),Levy(2007),Wheeler(2008))" 1 74 - 0 "32624(11|Itsara(2009),Kidd(2008),Shaikh(2009),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" IPKK73915 14 106072251 106206398 134148 Loss 1 0.897158 21 6707 chas 0 - 83.93 Loss 100 Loss #NAME? 27 66.19 Loss GTC "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 34203(1|Kidd(2008)) "134148(58|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4116(13|Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 27 - 0 "134148(303|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wong(2007),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400999HR male research_filter RPJZ72910 14 106072251 106206398 134148 Loss 1 0.885399 21 6707 chas 0 - 44.86 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 14q32.33 - - 0 - 0 - - 34203(1|Kidd(2008)) "134148(58|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "4116(13|Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" 96 27 - 0 "134148(303|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wong(2007),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401395OP male research_filter AXJJ81139 1 46386269 46520234 133966 Gain 3 0.901612 168 802 chas 100 Gain 99.99 Gain 100 Gain GainGainGain 80 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p34.1 - "MAST2,PIK3R3" 2 "MAST2,PIK3R3" 2 - - - 9377(2|Shaikh(2009)) - - 80 - 0 "120156(9|Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400432VA male "research_filter, clinical_filter" ICDL89338 6 118731468 118865238 133771 Gain 3 0.904811 115 1173 chas 95.68 Gain 97.85 Gain 97.85 Gain GainGainGain 67 96.61 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q22.31 - "C6orf204,BRD7P3" 2 "C6orf204,BRD7P3" 2 - - - 1593(1|McKernan(2009)) - 1 67 - 0 "133771(6|Itsara(2009),McKernan(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" TABQ91013 X 103171609 103305297 133689 Gain 3 0.881096 140 961 chas 59.19 Gain 0 - 0 - Gain-- 118 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFXP,TMSB15B,H2BFM" 5 "H2BFWT,H2BFXP,TMSB15B,H2BFM" 4 - - "100658(6|Pang(2010),Kidd(2008),Tuzun(2005))" "117231(12|de Smith(2007),Conrad(2009),Redon(2006),Matsuzaki(2009),Shaikh(2009))" 1249(4|de Smith(2007)) 37 118 - 0 "133689(22|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" AYKK27829 17 38052601 38186059 133459 Gain 3 0.899015 111 1213 chas 99.6 Gain 99.8 Gain 99.8 Gain GainGainGain 67 99.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "17q21.1,17q12" - "ORMDL3,GSDMA,GSDMB,MED24,PSMD3,CSF3,LRRC3C,SNORD124" 8 "ORMDL3,GSDMA,GSDMB,MED24,PSMD3,CSF3,LRRC3C,SNORD124" 8 - - - "14764(2|Pang(2010),Wheeler(2008))" 1(1|Mills(2006)) - 67 - 0 "5774(9|Pang(2010),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" WBPB92916 10 17927541 18060950 133410 Loss 1 0.876052 16 8894 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236" 2 "MRC1,TMEM236" 2 - - - - - 63 7 - 0 "133410(6|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401210PB male - OZXZ40778 5 17512016 17645350 133335 Loss 1 0.887449 26 5333 chas 32.05 Loss 0 - 0 - Loss-- 27 NA NA NA "ChAS,IPN" 5p15.1 50001(1|clone) - 0 - 0 - - - "133335(41|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 60 27 - 0 "133335(123|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" EHXC97365 5 17512016 17645350 133335 Loss 1 0.893626 26 5333 chas 32.05 Loss 65.5 Loss 0 - LossLoss- 27 NA NA NA "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "133335(41|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 60 27 - 0 "133335(123|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" KRGM31190 12 112181077 112314335 133259 Gain 3 0.903583 134 1001 chas 63.06 Gain 82.06 Gain 100 Gain GainGainGain 53 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "12q24.13,12q24.12" - "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 ALDH2 - - 1090(1|Ahn(2009)) - - 52 - 0 "118067(12|Ahn(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" PBNY43846 3 82926126 83059307 133182 Loss 1 0.928688 88 1530 chas 96.57 Loss 98.32 Loss 98.32 Loss LossLossLoss 88 NA NA NA "ChAS,IPN,NXS,PTK" 3p12.2 - - 0 - 0 - - - "2845(2|Conrad(2009),Matsuzaki(2009))" "1929(8|Ahn(2009),Matsuzaki(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Wheeler(2008))" - 88 - 0 "22109(37|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400702PA female "research_filter, clinical_filter" HQWW55061 8 39254033 39386952 132920 Loss 1 0.88036 68 1983 chas 0 - 0 - 0 - --- 53 0 - - ChAS 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132920(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 53 - 0 "132920(253|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no affy6_no 400523GB female clinical_filter LETQ64470 12 112181045 112313688 132644 Gain 3 0.911413 134 997 chas 87.26 Gain 99.53 Gain 100 Gain GainGainGain 52 90.63 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" "12q24.13,12q24.12" - "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 "ACAD10,MAPKAPK5,C12orf47,ALDH2" 4 ALDH2 - - 1090(1|Ahn(2009)) - - 52 - 0 "117452(12|Ahn(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" LAYE10086 8 39247098 39379655 132558 Loss 0 0.980912 70 1921 chas 100 Loss 100 Loss 68.3 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" CAEK98371 8 39247098 39379655 132558 Loss 0 0.980617 70 1921 chas 100 Loss 100 Loss 80.75 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" TOTG24684 8 39247098 39379655 132558 Loss 0 0.98423 70 1921 chas 100 Loss 100 Loss 64.38 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" PYWH93436 8 39247098 39379655 132558 Loss 0 0.977028 70 1921 chas 100 Loss 100 Loss 93.63 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400270BD female "research_filter, clinical_filter" MLUO94199 8 39247098 39379655 132558 Loss 0 0.983907 70 1921 chas 100 Loss 100 Loss 61.27 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" JWQI23251 8 39247098 39379655 132558 Loss 0 0.978938 70 1921 chas 100 Loss 100 Loss 87.46 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400247CL male "research_filter, clinical_filter" LFNU24334 8 39247098 39379655 132558 Loss 0 0.975496 70 1921 chas 100 Loss 100 Loss 58.49 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400471YS male "research_filter, clinical_filter" AQKH94698 8 39247098 39379655 132558 Loss 0 0.975602 70 1921 chas 100 Loss 91.97 Loss 87.24 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" WFIZ12719 8 39247098 39379655 132558 Loss 0 0.974203 70 1921 chas 100 Loss 100 Loss 100 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400793BR male "research_filter, clinical_filter" IGQR94047 8 39247098 39379655 132558 Loss 0 0.981029 70 1921 chas 100 Loss 100 Loss 80.9 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400060MC female "research_filter, clinical_filter" VWJW18084 8 39247098 39379655 132558 Loss 0 0.972938 70 1921 chas 100 Loss 100 Loss 96.39 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400441GS male "research_filter, clinical_filter" WMCV84375 8 39247098 39379655 132558 Loss 0 0.971332 70 1921 chas 100 Loss 100 Loss 100 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401249TP female "research_filter, clinical_filter" LCAJ69904 8 39247098 39379655 132558 Loss 0 0.958827 70 1921 chas 100 Loss 89.72 Loss 100 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401595BL female "research_filter, clinical_filter" IWRE15730 8 39247098 39379655 132558 Loss 0 0.98245 70 1921 chas 100 Loss 100 Loss 61.27 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" GHOG89686 8 39247098 39379655 132558 Loss 0 0.978797 70 1921 chas 100 Loss 100 Loss 100 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401459HF male "research_filter, clinical_filter" PYJA98100 8 39247098 39379655 132558 Loss 0 0.967078 70 1921 chas 100 Loss 100 Loss 77.67 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401981GF female "research_filter, clinical_filter" LMDJ78561 8 39247098 39379655 132558 Loss 0 0.977326 70 1921 chas 100 Loss 100 Loss 55.64 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" YOPA81411 8 39247098 39379655 132558 Loss 0 0.981979 70 1921 chas 100 Loss 100 Loss 75.41 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" BTJZ41884 8 39247098 39379655 132558 Loss 0 0.975516 70 1921 chas 100 Loss 100 Loss 93.63 Loss LossLossLoss 53 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "132558(32|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 2044(3|Park(2010)) 2 52 - 0 "132558(255|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400068PW female "research_filter, clinical_filter" UKBP75340 6 254176 386419 132244 Gain 3 0.906174 239 555 chas 0 - 95.85 Gain 94.72 Gain #NAME? 124 96.01 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "132244(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 124 - 0 "132244(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" GHAL32977 X 82888497 83020616 132120 Gain 2 0.943719 64 2097 chas 100 Gain 0 - 0 - Gain-- 62 NA NA NA "ChAS,IPN" Xq21.1 - - 0 - 0 - - - - - 2 62 - 0 "132120(2|Iafrate(2004),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" MDAA91863 X 47865295 47997394 132100 Gain 2 0.950578 96 1390 chas 82.55 Gain 0 - 0 - Gain-- 85 84.36 Gain "BS,GTC,IP6" "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" SLNP19984 X 47865295 47997394 132100 Gain 3 0.913088 96 1390 chas 79.16 Gain 0 - 0 - Gain-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" KXKI34745 X 47865295 47997394 132100 Loss 0 0.968001 96 1390 chas 82.55 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401994BD male "research_filter, clinical_filter" VGND49817 X 47865295 47997394 132100 Loss 0 0.977619 96 1390 chas 85.56 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" GSWW54097 X 47865295 47997394 132100 Gain 3 0.901264 96 1390 chas 82.55 Gain 0 - 0 - Gain-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401620BA female "research_filter, clinical_filter" TGEI86896 X 47865295 47997394 132100 Loss 0 0.977444 96 1390 chas 85.56 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401742KB male "research_filter, clinical_filter" GNMX63810 X 47865295 47997394 132100 Loss 0 0.980427 96 1390 chas 85.56 Loss 0 - 0 - Loss-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" DMKI43381 X 47865295 47997394 132100 Gain 3 0.913229 96 1390 chas 82.55 Gain 0 - 0 - Gain-- 85 NA NA NA "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 "SPACA5B,SPACA5,ZNF630,LOC100509575,SSX6" 5 - - 22802(1|Ahn(2009)) "132100(34|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1333(2|Perry(2008),Mills(2006))" 45 85 - 0 "132100(57|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" QCXI89270 19 20588837 20720868 132032 Loss 1 0.907092 89 1500 chas 91.09 Loss 98.25 Loss 98.25 Loss LossLossLoss 80 94.43 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "132032(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "132032(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" EATF12348 19 20588837 20720868 132032 Loss 1 0.891259 89 1500 chas 91.09 Loss 92.7 Loss 95.48 Loss LossLossLoss 80 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "132032(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "132032(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400352CA female "research_filter, clinical_filter" JKIG25467 19 20588837 20720705 131869 Loss 1 0.88833 88 1515 chas 89.36 Loss 85.39 Loss 98.23 Loss LossLossLoss 80 94.41 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400645KM male "research_filter, clinical_filter" TZAD89276 19 20588837 20720705 131869 Loss 1 0.894063 88 1515 chas 91.2 Loss 92.19 Loss 92.19 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401185LE female "research_filter, clinical_filter" ZPIM60940 19 20588837 20720705 131869 Loss 1 0.889931 88 1515 chas 91.2 Loss 91.08 Loss 93.84 Loss LossLossLoss 80 95.57 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" BQFC38547 19 20588837 20720705 131869 Loss 1 0.912929 88 1515 chas 91.2 Loss 96.6 Loss 96.6 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400238BB female "research_filter, clinical_filter" FEZX98083 19 20588837 20720705 131869 Loss 1 0.895586 88 1515 chas 89.36 Loss 93.84 Loss 93.84 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" BMGG13461 19 20588837 20720705 131869 Loss 1 0.891843 88 1515 chas 91.2 Loss 93.84 Loss 96.6 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400002HK female "research_filter, clinical_filter" ZSEZ81141 19 20588837 20720705 131869 Loss 1 0.89412 88 1515 chas 91.2 Loss 96.6 Loss 96.6 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" UYAI76550 19 20588837 20720705 131869 Loss 1 0.894423 88 1515 chas 91.2 Loss 91.16 Loss 92.81 Loss LossLossLoss 80 94.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" RDBP35321 19 20588837 20720705 131869 Loss 1 0.898465 88 1515 chas 89.36 Loss 91.04 Loss 95.48 Loss LossLossLoss 80 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" YBSU20689 19 20588837 20720705 131869 Loss 1 0.892808 88 1515 chas 91.2 Loss 95.48 Loss 95.48 Loss LossLossLoss 80 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" ENVJ37912 19 20588837 20720705 131869 Loss 1 0.902472 88 1515 chas 91.2 Loss 95.48 Loss 93.84 Loss LossLossLoss 80 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "131869(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 80 - 0 "131869(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400532MH male "research_filter, clinical_filter" XTPE89033 4 161549677 161681533 131857 Loss 1 0.91015 76 1758 chas 95.58 Loss 97.74 Loss 97.73 Loss LossLossLoss 77 95.56 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q32.1 - - 0 - 0 - - - - 1(1|Levy(2007)) - 77 - 0 "72396(10|Teague(2010),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" IUXY17884 2 35509263 35641094 131832 Loss 1 0.906033 58 2312 chas 87.53 Loss 90.33 Loss 90.32 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "117927(19|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005),Jakobsson(2008),Shaikh(2009))" - - 114 - 0 "131832(48|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Kidd(2008),Altshuler(2010),Cooper(2008),Campbell(2011),Pinto(2011),Redon(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401238QR male "research_filter, clinical_filter" GWFO72077 4 178748244 178879844 131601 Loss 1 0.924073 140 946 chas 94.47 Loss 94.89 Loss 97.15 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 4q34.3 - LOC285501 1 - 0 - - - - - - 82 - 0 "3335(5|Mills(2006),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" FXID76383 6 254254 385771 131518 Loss 1 0.900389 236 559 chas 100 Loss 71.31 Loss 98.92 Loss LossLossLoss 123 97.65 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "131518(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 123 - 0 "131518(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" ZYKC24489 7 26072272 26203527 131256 Gain 3 0.885573 84 1581 chas 41.87 Gain 45.19 Gain 0 - GainGain- 74 NA NA NA "ChAS,IPN,NXS" 7p15.2 - NFE2L3 1 NFE2L3 1 - - - "36851(14|Conrad(2009),Matsuzaki(2009),Ju(2010),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Kim(2009))" - - 74 - 0 "131256(92|Teague(2010),Jakobsson(2008),Ju(2010),Kidd(2010b),Itsara(2009),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Park(2010),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" AJUD27157 12 8004412 8135534 131123 Gain 3 0.898779 100 1324 chas 99.65 Gain 100 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "131123(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1441(2|Levy(2007),Mills(2006))" 17 68 - 0 "131123(163|Wang(2007),McKernan(2009),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Wilson(2010),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401075MN female "research_filter, clinical_filter" WTDT99871 12 8004412 8135534 131123 Gain 3 0.894159 100 1324 chas 91.24 Gain 95.29 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "131123(53|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1441(2|Levy(2007),Mills(2006))" 17 68 - 0 "131123(163|Wang(2007),McKernan(2009),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Wilson(2010),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401505WI male "research_filter, clinical_filter" XNUA56302 6 91986700 92117624 130925 Loss 1 0.924669 96 1378 chas 96.8 Loss 98.41 Loss 100 Loss LossLossLoss 94 99.39 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q15 - - 0 - 0 - - - "130925(3|Pinto(2007),Simon-Sanchez(2007))" - - 94 - 0 "130925(8|Itsara(2009),Durbin(2010),Wong(2007),Shaikh(2009),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" NJBJ54022 6 91986700 92117624 130925 Loss 1 0.935146 96 1378 chas 96.8 Loss 98.41 Loss 98.41 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 6q15 - - 0 - 0 - - - "130925(3|Pinto(2007),Simon-Sanchez(2007))" - - 94 - 0 "130925(8|Itsara(2009),Durbin(2010),Wong(2007),Shaikh(2009),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401066MM female "research_filter, clinical_filter" NNNK99860 5 46246500 46377315 130816 Loss 1 0.914656 28 4845 chas 0 - 71.89 Loss 0 - -Loss- 28 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "130816(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "130816(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400439IM female "research_filter, clinical_filter" XNFN85306 5 17512016 17642516 130501 Loss 1 0.882997 25 5437 chas 30.58 Loss 0 - 0 - Loss-- 26 NA NA NA "ChAS,IPN" 5p15.1 50001(1|clone) - 0 - 0 - - - "130501(41|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 61 26 - 0 "130501(123|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" SUUF34898 8 48174372 48304848 130477 Gain 3 0.894216 97 1359 chas 68.79 Gain 99.47 Gain 99.97 Gain GainGainGain 50 99.79 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q11.21 - KIAA0146 1 KIAA0146 1 - - "88941(5|Pang(2010),Kidd(2008),Korbel(2007))" 1312(1|de Smith(2007)) - 36 50 - 0 "126814(23|Teague(2010),Korbel(2007),Kidd(2010b),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400669LD male "research_filter, clinical_filter" MFZY15027 10 67952486 68082807 130322 Loss 1 0.922318 162 809 chas 97.79 Loss 98.9 Loss 98.9 Loss LossLossLoss 106 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "130322(8|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" "972(3|Pang(2010),Levy(2007),McKernan(2009))" - 106 - 0 "130322(21|Jakobsson(2008),Itsara(2009),McKernan(2009),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" SFLX52247 10 67952486 68082807 130322 Loss 1 0.910675 162 809 chas 97.79 Loss 98.85 Loss 98.9 Loss LossLossLoss 106 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "130322(8|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" "972(3|Pang(2010),Levy(2007),McKernan(2009))" - 106 - 0 "130322(21|Jakobsson(2008),Itsara(2009),McKernan(2009),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" CKLN80228 14 106536991 106667115 130125 Loss 0 0.964219 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 18.79 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400695PH female research_filter KWJN47187 14 106536991 106667115 130125 Loss 0 0.956645 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400821FE female research_filter SNEF27582 14 106536991 106667115 130125 Loss 0 0.97157 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401831TW male research_filter TLUK35377 14 106536991 106667115 130125 Loss 0 0.962963 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400053LE female research_filter THKF48028 14 106536991 106667115 130125 Loss 0 0.963561 15 9294 chas 18.43 Loss 24.79 Loss 12.95 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400601WC female research_filter MDAA91863 14 106536991 106667115 130125 Loss 0 0.961554 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400425SL male research_filter XPRZ52054 14 106536991 106667115 130125 Loss 0 0.961871 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400611GG male research_filter NCJU46793 14 106536991 106667115 130125 Loss 0 0.958647 15 9294 chas 18.43 Loss 23.12 Loss 20.76 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400061DE female research_filter EMKM20452 14 106536991 106667115 130125 Loss 0 0.946574 15 9294 chas 18.42 Loss 20.76 Loss 16.73 Loss LossLossLoss 62 23.14 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400107MJ male research_filter IAMC34091 14 106536991 106667115 130125 Gain 4 0.941507 15 9294 chas 18.43 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402067KS female research_filter NUMT67226 14 106536991 106667115 130125 Gain 4 0.939555 15 9294 chas 18.42 Gain 0 - 0 - Gain-- 62 NA NA NA "ChAS,IPN" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401079HJ female research_filter RLVK87046 14 106536991 106667115 130125 Gain 4 0.929679 15 9294 chas 18.42 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401563TK male research_filter APGE11753 14 106536991 106667115 130125 Gain 4 0.940788 15 9294 chas 18.42 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401017SC female research_filter UBKP24592 14 106536991 106667115 130125 Gain 4 0.936652 15 9294 chas 18.43 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401513KC male research_filter OWWR99794 14 106536991 106667115 130125 Loss 0 0.960474 15 9294 chas 18.43 Loss 24.79 Loss 8.85 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401497PR male research_filter DQOA73385 14 106536991 106667115 130125 Loss 0 0.970849 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401592NR male research_filter MWKR26526 14 106536991 106667115 130125 Gain 4 0.935802 15 9294 chas 18.42 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400225CJ male research_filter UJRA83281 14 106536991 106667115 130125 Loss 0 0.961735 15 9294 chas 18.43 Loss 23.12 Loss 16.01 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401361GG male research_filter DQHB62647 14 106536991 106667115 130125 Loss 0 0.954597 15 9294 chas 18.43 Loss 24.79 Loss 20.76 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401732HW male research_filter NNNK99860 14 106536991 106667115 130125 Gain 4 0.93805 15 9294 chas 18.43 Gain 24.79 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400439IM female research_filter MGJR69521 14 106536991 106667115 130125 Loss 0 0.956774 15 9294 chas 18.43 Loss 24.79 Loss 16.01 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401251WN female research_filter ELXG87337 14 106536991 106667115 130125 Loss 1 0.882398 15 9294 chas 0 - 0 - 0 - --- 62 0 - - ChAS 14q32.33 - - 0 - 0 - - - "130125(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130125(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_no 401634CH male - XWKR95070 14 106536991 106667035 130045 Loss 0 0.979719 14 10003 chas 18.44 Loss 24.8 Loss 16.02 Loss LossLossLoss 62 18.8 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400855BD female research_filter NFIA96453 14 106536991 106667035 130045 Loss 0 0.97755 14 10003 chas 18.44 Loss 24.8 Loss 23.49 Loss LossLossLoss 62 23.15 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400069CN female research_filter CSHY74530 14 106536991 106667035 130045 Gain 4 0.955775 14 10003 chas 18.44 Gain 27.69 Gain 0 - GainGain- 62 23.15 Gain IP6 "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400148MS female research_filter OAZH14211 14 106536991 106667035 130045 Loss 0 0.977609 14 10003 chas 18.44 Loss 24.8 Loss 16.02 Loss LossLossLoss 62 23.15 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400246MG male research_filter EIZV81962 14 106536991 106667035 130045 Loss 0 0.973395 14 10003 chas 18.44 Loss 24.8 Loss 23.49 Loss LossLossLoss 62 23.15 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400937OR female research_filter UYAI76550 14 106536991 106667035 130045 Loss 0 0.973632 14 10003 chas 18.44 Loss 24.8 Loss 20.78 Loss LossLossLoss 62 23.15 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400792RE female research_filter ZRKC95930 14 106536991 106667035 130045 Loss 0 0.962717 14 10003 chas 18.44 Loss 24.8 Loss 24.8 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400242TP female research_filter VWJW18084 14 106536991 106667035 130045 Gain 4 0.937198 14 10003 chas 18.44 Gain 23.13 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400441GS male research_filter LHPN45961 14 106536991 106667035 130045 Loss 0 0.975614 14 10003 chas 18.44 Loss 24.8 Loss 8.86 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400603CJ male research_filter WPKS46597 14 106536991 106667035 130045 Gain 4 0.932544 14 10003 chas 18.44 Gain 16.03 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400732MA female research_filter BKFI83925 14 106536991 106667035 130045 Loss 0 0.96336 14 10003 chas 18.44 Loss 23.13 Loss 8.86 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401990PR male research_filter VRGJ17464 14 106536991 106667035 130045 Gain 4 0.935272 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401914PR male research_filter TTCB91135 14 106536991 106667035 130045 Loss 0 0.962564 14 10003 chas 18.44 Loss 23.13 Loss 16.74 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401376RD male research_filter GBOO31083 14 106536991 106667035 130045 Gain 4 0.937466 14 10003 chas 18.44 Gain 16.03 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400282RA female research_filter NDHJ32269 14 106536991 106667035 130045 Loss 0 0.967037 14 10003 chas 18.44 Loss 24.8 Loss 16.02 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402008MC female research_filter QBXB16173 14 106536991 106667035 130045 Loss 0 0.973241 14 10003 chas 18.44 Loss 20.78 Loss 16.02 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402052ZA male research_filter DEYQ16754 14 106536991 106667035 130045 Loss 0 0.967852 14 10003 chas 18.44 Loss 23.13 Loss 16.02 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401825TH female research_filter YPKU53656 14 106536991 106667035 130045 Gain 4 0.939304 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402022SM female research_filter XHZD61935 14 106536991 106667035 130045 Gain 4 0.951731 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401785MJ female research_filter LOOD16085 14 106536991 106667035 130045 Gain 4 0.933424 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400376SJ female research_filter SAHS24305 14 106536991 106667035 130045 Gain 4 0.939828 14 10003 chas 18.44 Gain 23.13 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401968HL female research_filter LUVG84905 14 106536991 106667035 130045 Loss 0 0.965558 14 10003 chas 18.44 Loss 16.03 Loss 27.69 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401664SD male research_filter XZCA75295 14 106536991 106667035 130045 Loss 0 0.969957 14 10003 chas 18.44 Loss 24.8 Loss 12.96 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400033KC female research_filter ZKED26020 14 106536991 106667035 130045 Gain 4 0.954748 14 10003 chas 18.43 Gain 23.13 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401652HL female research_filter RQNQ20012 14 106536991 106667035 130045 Loss 0 0.967134 14 10003 chas 18.44 Loss 26.47 Loss 25.16 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401326LI female research_filter WTDT99871 14 106536991 106667035 130045 Gain 4 0.941798 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401505WI male research_filter YOPA81411 14 106536991 106667035 130045 Gain 4 0.940899 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402056KD male research_filter OWVL37831 14 106536991 106667035 130045 Gain 4 0.949304 14 10003 chas 18.44 Gain 20.78 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400770MA female research_filter DUXB26784 14 106536991 106667035 130045 Gain 4 0.943097 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401519SA female research_filter DMKI43381 14 106536991 106667035 130045 Gain 4 0.947389 14 10003 chas 18.44 Gain 24.8 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400763BT female research_filter VPFM57168 14 106536991 106667035 130045 Loss 0 0.982034 14 10003 chas 0 - 20.78 Loss 16.02 Loss #NAME? 62 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - - "130045(42|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - 68 62 - 0 "130045(327|Teague(2010),Korbel(2007),Wang(2007),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401696CG male research_filter TCTA60809 17 44162760 44292676 129917 Gain 3 0.896364 108 1214 chas 18.56 Gain 48.08 Gain 99.87 Gain GainGainGain 115 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "47446#1%""17q21.3 recurrent microdeletion syndrome"":577740" 129917(1|Kidd(2008)) "129917(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 20 115 - 0 "129917(269|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401965TG female "research_filter, clinical_filter" QXAY99372 1 48667987 48797800 129814 Gain 3 0.888069 121 1081 chas 92.17 Gain 53.11 Gain 92.39 Gain GainGainGain 72 93.08 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p33 - "SLC5A9,SPATA6" 2 "SLC5A9,SPATA6" 2 - - - "2219(6|Conrad(2009),McKernan(2009),Matsuzaki(2009),Bentley(2008))" "609(2|Wang(2008),Matsuzaki(2009))" - 72 - 0 "77819(19|Conrad(2009),Teague(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400040CN male "research_filter, clinical_filter" VBEF49630 3 162521297 162651027 129731 Loss 1 0.873496 28 4804 chas 0 - 0 - 100 Loss #NAME? 87 NA NA NA "ChAS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "129731(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 87 - 0 "129731(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400022WA female "research_filter, clinical_filter" JYCC50302 3 162521297 162651027 129731 Loss 1 0.884433 28 4804 chas 0 - 0 - 0 - --- 87 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "129731(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 87 - 0 "129731(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401778CB male clinical_filter TJGR62389 3 4183925 4313485 129561 Loss 1 0.933339 92 1423 chas 100 Loss 100 Loss 100 Loss LossLossLoss 96 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "129561(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "807(3|Levy(2007),Perry(2008))" - 96 - 0 "129561(37|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" QKWF92816 3 4183925 4313485 129561 Loss 1 0.93231 92 1423 chas 99.78 Loss 99.64 Loss 100 Loss LossLossLoss 96 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "129561(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "807(3|Levy(2007),Perry(2008))" - 96 - 0 "129561(37|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400295PS female "research_filter, clinical_filter" YAZD71442 3 4183925 4313485 129561 Loss 1 0.918459 92 1423 chas 100 Loss 100 Loss 100 Loss LossLossLoss 96 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "129561(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "807(3|Levy(2007),Perry(2008))" - 96 - 0 "129561(37|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" VXMJ58338 3 4183925 4313485 129561 Loss 1 0.908116 92 1423 chas 99.78 Loss 100 Loss 100 Loss LossLossLoss 96 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "129561(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "807(3|Levy(2007),Perry(2008))" - 96 - 0 "129561(37|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" IZON54653 Y 24073795 24203297 129503 Gain 2 0.849931 320 405 chas 42.44 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "129503#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 129503(3|Matsuzaki(2009)) 380(1|Perry(2008)) 100 3 - 0 "129503(5|Locke(2006),Redon(2006),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400572PJ male "research_filter, clinical_filter" LTTD14271 6 8589916 8718988 129073 Loss 1 0.931059 119 1093 chas 98 Loss 98.79 Loss 98.79 Loss LossLossLoss 87 98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p24.3 - "LOC100506207,HULC" 2 "LOC100506207,HULC" 2 - - - - - - 87 - 0 "10970(3|Banerjee(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" IEKT57966 3 197319822 197448753 128932 Gain 3 0.883145 88 1481 chas 45.09 Gain 30.63 Gain 0 - GainGain- 38 NA NA NA "ChAS,IPN,NXS" 3q29 - "KIAA0226,LOC220729,MIR922" 3 "KIAA0226,LOC220729,MIR922" 3 - "128932#2%""3q29 microdeletion syndrome"":1825641,""3q29 microduplication syndrome"":1825641" "66469(2|Kidd(2008),Tuzun(2005))" "78785(15|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Itsara(2009),Redon(2006))" "506(2|Pang(2010),Bentley(2008))" 41 38 - 0 "128932(69|Teague(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Wilson(2010),Perry(2008b),Pinto(2011),Redon(2006),Ju(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400274TL female "research_filter, clinical_filter" GEZQ95890 5 17513397 17641469 128073 Loss 1 0.894543 23 5821 chas 30.34 Loss 65.16 Loss 0 - LossLoss- 24 31.18 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "128073(39|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" - 60 24 - 0 "128073(121|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401487FW male research_filter NUMT67226 5 17513397 17641469 128073 Loss 1 0.895939 23 5821 chas 30.34 Loss 0 - 0 - Loss-- 24 NA NA NA "ChAS,IPN" 5p15.1 50001(1|clone) - 0 - 0 - - - "128073(39|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" - 60 24 - 0 "128073(121|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401079HJ female research_filter MUBF17546 14 106232260 106360331 128072 Gain 3 0.887653 123 1049 chas 64 Gain 60.76 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - "82906(2|Kidd(2008),Ahn(2009))" "128072(64|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Park(2010),Pang(2010),Kidd(2008),Tuzun(2005),McCarroll(2005),Kim(2009))" "2692(10|Pang(2010),Conrad(2009),Levy(2007),Park(2010),Mills(2006))" 10 66 - 0 "128072(596|Sebat(2004),Korbel(2007),Wang(2007),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Cooper(2008),Tuzun(2005),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400540BM male "research_filter, clinical_filter" VWYL75938 X 49173886 49301919 128034 Loss 1 0.895089 12 11639 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 - - - "128034(17|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 61 3 - 0 "78035(36|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401006ES female - DBFY56089 X 49173938 49301919 127982 Loss 1 0.886817 10 14220 chas 0 - 0 - 0 - --- 2 0 - - ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 - - - "127982(17|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 61 2 - 0 "77983(36|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400458LS female - NOIN63241 X 49173938 49301919 127982 Loss 1 0.884024 10 14220 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 - - - "127982(17|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 61 2 - 0 "77983(36|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 400641WJ female - UXJM82913 7 65148400 65276205 127806 Loss 1 0.913879 73 1775 chas 100 Loss 73.27 Loss 100 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - "LOC441242,SNORA22,INTS4L2,CCT6P1" 4 "LOC441242,SNORA22,INTS4L2,CCT6P1" 4 - - - "127806(13|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Pinto(2007),Park(2010),Kim(2009))" - 89 42 - 0 "127806(71|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Ju(2010),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" QCLE90373 6 253363 381137 127775 Gain 3 0.905721 232 553 chas 0 - 99.8 Gain 99.58 Gain #NAME? 117 96.89 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "127775(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 116 - 0 "127775(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401053MF female "research_filter, clinical_filter" AQKH94698 6 253363 381137 127775 Gain 3 0.876835 232 553 chas 0 - 24.64 Gain 0 - -Gain- 117 26.69 Gain IP6 "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "127775(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 116 - 0 "127775(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" DUEF32956 6 253363 381137 127775 Gain 3 0.894386 232 553 chas 0 - 96.94 Gain 96.12 Gain #NAME? 117 0 - - "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "127775(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 116 - 0 "127775(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401190WC male "research_filter, clinical_filter" LMDJ78561 X 49174229 49301919 127691 Loss 1 0.914448 8 18241 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xp11.23 50001(1|contig) "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 "GAGE8,GAGE12C,GAGE12E,GAGE12I,GAGE2D,GAGE2E,GAGE5,GAGE13,GAGE7,GAGE2A,GAGE12H,GAGE10,GAGE12J,GAGE2B,GAGE12B,GAGE2C,GAGE12D,GAGE4,GAGE12F,GAGE12G" 20 - - - "127691(17|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" - 61 2 - 0 "77692(36|Conrad(2009),Ju(2010),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006))" FALSE TRUE ipn_no algo_no NA 401518VK female - WSSG80726 2 35735715 35863393 127679 Loss 1 0.919111 92 1403 chas 99.99 Loss 98.57 Loss 98.57 Loss LossLossLoss 103 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "45288(2|Itsara(2009),Jakobsson(2008))" - - 103 - 0 "127679(18|Teague(2010),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" LMJA76842 19 20588837 20716337 127501 Loss 0 0.966239 86 1500 chas 94.29 Loss 94.25 Loss 95.26 Loss LossLossLoss 79 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "127501(38|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Simon-Sanchez(2007),Park(2010),Itsara(2009),Shaikh(2009),Cooper(2008))" - 6 78 - 0 "127501(312|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),Cooper(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" XNCW62958 X 22971444 23098932 127489 Loss 0 0.937732 108 1191 chas 93.48 Loss 0 - 0 - Loss-- 99 NA NA NA "ChAS,IPN" Xp22.11 - DDX53 1 DDX53 1 - - - "23306(2|Wheeler(2008),Redon(2006))" - 1 99 - 0 "104124(10|Kidd(2008),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" YKWT45889 16 74339123 74466419 127297 Gain 4 0.925255 60 2157 chas 75.26 Gain 54.46 Gain 0 - GainGain- 31 72.69 Gain "GTC,IP6" "ChAS,IPN,NXS" 16q23.1 - "LOC283922,PSMD7,CLEC18B" 3 "LOC283922,PSMD7,CLEC18B" 3 - - - "127297(26|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 78 31 - 0 "127297(95|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400094RS male "research_filter, clinical_filter" XMVT70735 Y 22228627 22355769 127143 Gain 2 0.870337 44 2956 chas 0 - 0 - 0 - --- 21 0 - - ChAS Yq11.223 - - 0 - 0 - "127143#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "127143(3|Levy(2007),Perry(2008),Bentley(2008))" 1(1|Levy(2007)) - 21 - 0 "127143(12|Levy(2007),Durbin(2010),Perry(2008),Bentley(2008))" FALSE TRUE ipn_no algo_no affy6_no 401873BK male - BYSK29073 3 164303327 164430345 127019 Loss 1 0.927051 64 2016 chas 90.56 Loss 95.28 Loss 95.28 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "25697(4|Kidd(2008),Matsuzaki(2009),Conrad(2009))" 167(1|Bentley(2008)) - 63 - 0 "127019(18|Conrad(2009),Wong(2007),Kidd(2010b),Itsara(2009),Perry(2008b),Durbin(2010),Bentley(2008),Kidd(2008),Campbell(2011),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" ZJNH41176 9 12000100 12127088 126989 Loss 1 0.925265 96 1336 chas 99.99 Loss 99.31 Loss 100 Loss LossLossLoss 104 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "126989(33|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 104 - 0 "126989(51|Wang(2007),Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400285FA female "research_filter, clinical_filter" NLDQ95097 9 12000100 12127088 126989 Loss 1 0.908509 96 1336 chas 99.99 Loss 99.7 Loss 99.7 Loss LossLossLoss 104 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "126989(33|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 104 - 0 "126989(51|Wang(2007),Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" PUOR77387 6 254176 381137 126962 Gain 3 0.885273 229 556 chas 8.04 Gain 91.66 Gain 97.72 Gain GainGainGain 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126962(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126962(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401603HH female "research_filter, clinical_filter" DQOB10223 15 24350856 24477793 126938 Loss 1 0.878509 110 1164 chas 99.63 Loss 38.38 Loss 99.68 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "126938#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "126938(43|Wang(2007),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 98 83 - 0 "126938(78|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401567BD male "research_filter, clinical_filter" CSHY74530 17 36283807 36410720 126914 Gain 3 0.892894 33 3966 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126914(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126914(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400148MS female - RWTQ90156 6 254254 381137 126884 Loss 1 0.902814 228 558 chas 100 Loss 68.51 Loss 98.88 Loss LossLossLoss 116 100 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" YCLA52151 6 254254 381137 126884 Loss 1 0.89622 228 558 chas 3.31 Loss 72.8 Loss 72.79 Loss LossLossLoss 116 97.57 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400173KP female "research_filter, clinical_filter" JYCC50302 6 254254 381137 126884 Loss 1 0.90865 228 558 chas 35.61 Loss 67.91 Loss 98.88 Loss LossLossLoss 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" SEZK29585 6 254254 381137 126884 Loss 1 0.903665 228 558 chas 97.46 Loss 71.36 Loss 97.78 Loss LossLossLoss 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" WMBQ46007 6 254254 381137 126884 Gain 3 0.922908 228 558 chas 11.66 Gain 98.89 Gain 100 Gain GainGainGain 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" RQNQ20012 6 254254 381137 126884 Loss 1 0.886578 228 558 chas 2.61 Loss 68.51 Loss 68.21 Loss LossLossLoss 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401326LI female "research_filter, clinical_filter" TUOI10912 6 254254 381137 126884 Loss 1 0.902103 228 558 chas 81.58 Loss 45.49 Loss 98.88 Loss LossLossLoss 116 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" MTFT89424 6 254254 381137 126884 Gain 3 0.90192 228 558 chas 0 - 98.73 Gain 98.88 Gain #NAME? 116 94.25 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" AYLS39762 6 254254 381137 126884 Gain 3 0.910172 228 558 chas 0 - 97.78 Gain 97.78 Gain #NAME? 116 93.49 Gain "GTC,IP6" "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400663MD female "research_filter, clinical_filter" YQRK14476 6 254254 381137 126884 Gain 3 0.908251 228 558 chas 0 - 99.98 Gain 98.88 Gain #NAME? 116 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126884(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126884(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401154BR male "research_filter, clinical_filter" DCUN59806 6 254283 381137 126855 Loss 1 0.889985 227 561 chas 97.48 Loss 39.92 Loss 98.91 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126855(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 114 - 0 "126855(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" QBLX62038 6 254283 381137 126855 Loss 1 0.895601 227 561 chas 97.48 Loss 71.6 Loss 98.91 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126855(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 114 - 0 "126855(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401681MS female "research_filter, clinical_filter" HAAE15834 6 254283 381137 126855 Loss 1 0.907231 227 561 chas 81.6 Loss 71.31 Loss 98.91 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126855(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 114 - 0 "126855(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" AXFF10000 6 254283 381137 126855 Loss 1 0.895375 227 561 chas 81.6 Loss 71.29 Loss 97.74 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126855(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 114 - 0 "126855(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400272AE male "research_filter, clinical_filter" UEII10946 6 254283 381137 126855 Loss 1 0.893224 227 561 chas 81.6 Loss 72.81 Loss 97.08 Loss LossLossLoss 115 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126855(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 114 - 0 "126855(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401913GT male "research_filter, clinical_filter" NUHG48677 17 36283807 36410559 126753 Loss 1 0.885677 32 4088 chas 0 - 97.63 Loss 0 - -Loss- 4 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 40050SB female "research_filter, clinical_filter" WSSG80726 17 36283807 36410559 126753 Loss 1 0.940522 32 4088 chas 0 - 97.63 Loss 97.63 Loss #NAME? 4 NA NA NA "ChAS,NXS,PTK" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400515ZG male "research_filter, clinical_filter" TCTA60809 17 36283807 36410559 126753 Loss 1 0.916927 32 4088 chas 0 - 97.63 Loss 97.63 Loss #NAME? 4 NA NA NA "ChAS,NXS,PTK" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 401965TG female "research_filter, clinical_filter" RLVK87046 17 36283807 36410559 126753 Loss 1 0.907268 32 4088 chas 0 - 97.63 Loss 0 - -Loss- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 401563TK male "research_filter, clinical_filter" XOQW96687 17 36283807 36410559 126753 Loss 1 0.890191 32 4088 chas 0 - 97.63 Loss 0 - -Loss- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400121PL female "research_filter, clinical_filter" KWJN47187 17 36283807 36410559 126753 Loss 1 0.874997 32 4088 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400821FE female clinical_filter VPWL90389 17 36283807 36410559 126753 Loss 1 0.870482 32 4088 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401912HD male clinical_filter BOER26307 17 36283807 36410559 126753 Loss 1 0.893301 32 4088 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400571WV female clinical_filter CBEA57280 17 36283807 36410559 126753 Loss 1 0.875344 32 4088 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400231LP female clinical_filter MYLH81171 17 36283807 36410559 126753 Loss 1 0.872192 32 4088 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401972BA male clinical_filter ETUR65669 17 36283807 36410559 126753 Loss 1 0.876584 32 4088 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401056TJ male clinical_filter KQIO31508 17 36283807 36410559 126753 Loss 1 0.882968 32 4088 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400507VD male clinical_filter MLXC26947 17 36283807 36410559 126753 Loss 1 0.891958 32 4088 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401977ES male clinical_filter PYHX78792 17 36283807 36410559 126753 Gain 3 0.910656 32 4088 chas 0 - 97.63 Gain 0 - -Gain- 4 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401799DP male research_filter THXY16685 17 36283807 36410559 126753 Gain 3 0.915247 32 4088 chas 0 - 92.24 Gain 0 - -Gain- 4 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400114GR female research_filter TGWW40273 17 36283807 36410559 126753 Gain 3 0.891038 32 4088 chas 0 - 95.11 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400140WM female research_filter OSBA52088 17 36283807 36410559 126753 Gain 3 0.892929 32 4088 chas 0 - 97.63 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401617KM female research_filter ZGTI52802 17 36283807 36410559 126753 Gain 3 0.921787 32 4088 chas 0 - 97.63 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401474CE male research_filter DHFF12670 17 36283807 36410559 126753 Gain 3 0.902811 32 4088 chas 0 - 100 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401252AE male research_filter VHGW31501 17 36283807 36410559 126753 Gain 3 0.895001 32 4088 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "126753(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "126753(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401819BS female - EXZC47846 6 254254 380993 126740 Gain 3 0.91149 224 568 chas 0 - 98.89 Gain 98.88 Gain #NAME? 115 0 - - "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "126740(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 115 - 0 "126740(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400468OB female "research_filter, clinical_filter" AQKH94698 14 31544831 31671543 126713 Gain 3 0.887374 139 918 chas 91.61 Gain 98.82 Gain 98.81 Gain GainGainGain 56 96.51 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q12 - "AP4S1,HECTD1" 2 "AP4S1,HECTD1" 2 AP4S1 - - "126713(2|de Smith(2007),Wheeler(2008))" - 3 56 - 0 "126713(6|Kidd(2008),Wong(2007),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" ZRZC68152 19 55252034 55378686 126653 Loss 1 0.893917 54 2389 chas 55.9 Loss 31.48 Loss 80.65 Loss LossLossLoss 55 87.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 KIR3DL1 - - "126653(55|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 55 - 0 "126653(159|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400155CW male "research_filter, clinical_filter" XOFJ42304 8 145766673 145893300 126628 Gain 3 0.904753 100 1279 chas 86.37 Gain 96.64 Gain 99.08 Gain GainGainGain 44 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.3 - ARHGAP39 1 ARHGAP39 1 - - - "7665(5|Conrad(2009),Matsuzaki(2009))" "2749(13|Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" 2 44 - 0 "126628(30|Conrad(2009),Wong(2007),Teague(2010),Levy(2007),Durbin(2010),Bentley(2008),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400177CG male "research_filter, clinical_filter" KLXQ40405 19 55252034 55378651 126618 Loss 1 0.88391 53 2434 chas 27.84 Loss 56.3 Loss 86.58 Loss LossLossLoss 54 87.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 KIR3DL1 - - "126618(55|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 54 - 0 "126618(159|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400051MR_1 male "research_filter, clinical_filter" RLVK87046 5 36247481 36374029 126549 Gain 3 0.897129 118 1081 chas 100 Gain 97.98 Gain 100 Gain GainGainGain 94 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.2 - RANBP3L 1 RANBP3L 1 - - - - "341(2|Wang(2008),Mills(2006))" - 94 - 0 "49252(14|Wang(2008),Wong(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" QBXB16173 X 140079711 140206213 126503 Gain 2 0.927362 12 11500 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq27.1 - "SPANXB1,SPANXB2,SPANXF1" 3 "SPANXB1,SPANXB2,SPANXF1" 3 - - 126503(1|Kidd(2008)) "122614(9|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Pang(2010),Kidd(2008),Cooper(2008))" - 100 7 - 0 "126503(26|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),Conrad(2009),Cooper(2008),Campbell(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402052ZA male - WCXF39029 Y 24866936 24993236 126301 Loss 0 0.90448 72 1778 chas 99.93 Loss 0 - 0 - Loss-- 26 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "126301#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 26 - 0 "126301(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400788PV male "research_filter, clinical_filter" VUCC31552 Y 24866936 24993236 126301 Gain 2 0.925285 72 1778 chas 90.66 Gain 0 - 0 - Gain-- 26 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "126301#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 26 - 0 "126301(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400109LJ male "research_filter, clinical_filter" PWPH55056 Y 24866936 24993236 126301 Gain 2 0.913278 72 1778 chas 99.93 Gain 0 - 0 - Gain-- 26 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "126301#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 26 - 0 "126301(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401804FG male "research_filter, clinical_filter" VTLK66107 3 162524824 162651027 126204 Loss 1 0.874895 26 5048 chas 12.41 Loss 77.81 Loss 87.52 Loss LossLossLoss 85 80.17 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401153HS female "research_filter, clinical_filter" VZJS13167 3 162524824 162651027 126204 Loss 1 0.878851 26 5048 chas 12.41 Loss 72.22 Loss 76.32 Loss LossLossLoss 85 80.17 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400213DB female "research_filter, clinical_filter" ZRRL85494 3 162524824 162651027 126204 Loss 1 0.872279 26 5048 chas 12.41 Loss 80.84 Loss 92.87 Loss LossLossLoss 85 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" TBRP43796 3 162524824 162651027 126204 Loss 1 0.890273 26 5048 chas 0 - 76.32 Loss 76.32 Loss #NAME? 85 80.17 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401894PD male "research_filter, clinical_filter" HAAE15834 3 162524824 162651027 126204 Loss 1 0.898242 26 5048 chas 0 - 39.56 Loss 92.87 Loss #NAME? 85 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401899MB male "research_filter, clinical_filter" DQHB62647 3 162524824 162651027 126204 Loss 1 0.912283 26 5048 chas 0 - 92.87 Loss 86.03 Loss #NAME? 85 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "126204(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 85 - 0 "126204(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401732HW male "research_filter, clinical_filter" TZSA84286 10 47022649 47148814 126166 Loss 1 0.85385 158 803 chas 0 - 0 - 0 - --- 123 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - "40624(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "126166(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 123 - 0 "126166(241|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401166WJ female clinical_filter KIIK22313 9 26131077 26257238 126162 Loss 1 0.940751 68 1883 chas 99.99 Loss 99.62 Loss 100 Loss LossLossLoss 84 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.2 - - 0 - 0 - - - "66573(3|Matsuzaki(2009),Zogopoulos(2007))" - - 84 - 0 "8919(2|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401496SL male "research_filter, clinical_filter" IJCH39724 X 148701624 148827774 126151 Gain 2 0.947819 370 341 chas 99.99 Gain 0 - 0 - Gain-- 72 NA NA NA "ChAS,IPN" Xq28 - "TMEM185A,MAGEA11" 2 "TMEM185A,MAGEA11" 2 - - - - - 44 72 - 0 "126151(7|Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401571SD male "research_filter, clinical_filter" EGQB52790 5 83786560 83912510 125951 Loss 1 0.932517 58 2209 chas 99.93 Loss 99.75 Loss 100 Loss LossLossLoss 58 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q14.3 - - 0 - 0 - - - "20687(5|Pang(2010),Park(2010),McKernan(2009),Matsuzaki(2009))" - 1 58 - 0 "109044(12|Pang(2010),Park(2010),McKernan(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" TASV63603 15 43851399 43977181 125783 Gain 3 0.916482 78 1633 chas 70.51 Gain 86.3 Gain 86.3 Gain GainGainGain 25 73.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,PPIP5K1,CATSPER2,CKMT1B" 4 "STRC,PPIP5K1,CATSPER2,CKMT1B" 4 STRC - - "125783(19|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 25 - 0 "125783(42|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" QVQY90814 9 12022942 12148632 125691 Loss 1 0.902678 88 1444 chas 81.85 Loss 81.85 Loss 96.42 Loss LossLossLoss 93 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "125691(22|Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 93 - 0 "125691(42|Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Perry(2008b),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401311GL female "research_filter, clinical_filter" YQRK14476 11 90469818 90595366 125549 Loss 1 0.910217 122 1037 chas 99.75 Loss 99.88 Loss 100 Loss LossLossLoss 103 NA NA NA "ChAS,IPN,NXS,PTK" 11q14.3 - - 0 - 0 - - - "40619(9|Conrad(2009),Matsuzaki(2009),McKernan(2009),Altshuler(2010),Bentley(2008),McCarroll(2008),Park(2010))" - - 103 - 0 "125549(45|Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Altshuler(2010),Campbell(2011),Park(2010),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" QKZI23426 17 3431969 3557452 125484 Gain 3 0.899802 188 671 chas 95.89 Gain 100 Gain 100 Gain GainGainGain 80 NA NA NA "ChAS,IPN,NXS,PTK" 17p13.2 - "CTNS,TRPV1,SHPK,TRPV3" 4 "CTNS,TRPV1,SHPK,TRPV3" 4 CTNS - - "52238(3|Itsara(2009),Pang(2010),Shaikh(2009))" "719(2|Levy(2007),McKernan(2009))" - 79 - 0 "125484(20|Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400943DV female "research_filter, clinical_filter" GFOF72186 19 20596106 20721501 125396 Loss 1 0.906258 89 1424 chas 95.91 Loss 77.74 Loss 97.65 Loss LossLossLoss 79 99.72 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "125396(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 79 - 0 "125396(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" LYLV54353 4 69360476 69485827 125352 Gain 3 0.891634 54 2365 chas 39.83 Gain 69.6 Gain 0 - GainGain- 69 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B17,TMPRSS11E" 2 "UGT2B17,TMPRSS11E" 2 - - - "125352(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 52 69 - 0 "125352(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401506LK male "research_filter, clinical_filter" RMNM29531 2 131974176 132099295 125120 Loss 1 0.878204 52 2453 chas 16.15 Loss 30.48 Loss 30.48 Loss LossLossLoss 23 56.26 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q21.1 - "LOC440910,POTEE" 2 "LOC440910,POTEE" 2 - - - "125120(13|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008))" 914(1|Matsuzaki(2009)) 100 23 - 0 "125120(47|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" DOJD65755 10 135252179 135377266 125088 Gain 3 0.892995 235 534 chas 89.93 Gain 94.98 Gain 100 Gain GainGainGain 113 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125088(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125088(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 402023EC female "research_filter, clinical_filter" SBZX25020 10 135252179 135377265 125087 Gain 3 0.883848 234 536 chas 16.63 Gain 32.79 Gain 100 Gain GainGainGain 112 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" TQQL83388 10 135252179 135377265 125087 Gain 3 0.890563 234 536 chas 94.62 Gain 95.28 Gain 95.34 Gain GainGainGain 112 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" NFNX93095 10 135252179 135377265 125087 Gain 3 0.894371 234 536 chas 89.93 Gain 100 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401318AV female "research_filter, clinical_filter" ZHGO36222 10 135252179 135377265 125087 Gain 3 0.898108 234 536 chas 100 Gain 100 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401135CS female "research_filter, clinical_filter" CQAD90614 10 135252179 135377265 125087 Gain 3 0.894546 234 536 chas 66.43 Gain 70.84 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401346FJ female "research_filter, clinical_filter" UFYD24142 10 135252179 135377265 125087 Gain 3 0.89964 234 536 chas 100 Gain 100 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400313DF female "research_filter, clinical_filter" NNNK99860 10 135252179 135377265 125087 Gain 3 0.900601 234 536 chas 100 Gain 100 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "125087(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 111 - 0 "125087(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400439IM female "research_filter, clinical_filter" IBGK33359 10 89117288 89242262 124975 Gain 3 0.885665 68 1865 chas 39.15 Gain 71.85 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 10q23.2 - FAM22D 1 FAM22D 1 - - - "124975(16|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005))" - 100 42 - 0 "124975(69|Conrad(2009),Redon(2006),Perry(2008),Kidd(2010b),Schuster(2010),Durbin(2010),Kidd(2008),Tuzun(2005),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" USNP20353 10 27584446 27709398 124953 Loss 1 0.92296 122 1032 chas 79.09 Loss 94.05 Loss 94.05 Loss LossLossLoss 95 87.3 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p12.1 - PTCHD3 1 PTCHD3 1 - - - "124953(27|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 963(1|Matsuzaki(2009)) 48 95 - 0 "124953(76|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Campbell(2011),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Kidd(2010b),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400082SD female "research_filter, clinical_filter" EFHU67365 19 20596106 20720868 124763 Loss 1 0.892519 87 1450 chas 94.45 Loss 0 - 99.02 Loss Loss-Loss 76 NA NA NA "ChAS,IPN,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "124763(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124763(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401333MM male "research_filter, clinical_filter" MLXC26947 19 20596106 20720868 124763 Loss 1 0.886157 87 1450 chas 96.4 Loss 52.39 Loss 98.1 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "124763(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124763(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" ISXJ62958 16 14929145 15053870 124726 Loss 1 0.90954 28 4619 chas 0 - 3.29 Loss 0 - -Loss- 34 51.33 Loss GTC "ChAS,NXS" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - "78680(5|Kidd(2008),Tuzun(2005))" "124726(29|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 96 33 - 0 "124726(116|Teague(2010),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Ju(2010),Kim(2009),De(Smith_2007),Wheeler(2008),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" COLF20670 16 14929145 15053870 124726 Loss 1 0.906661 28 4619 chas 0 - 3.29 Loss 3.29 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - "78680(5|Kidd(2008),Tuzun(2005))" "124726(29|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 96 33 - 0 "124726(116|Teague(2010),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Ju(2010),Kim(2009),De(Smith_2007),Wheeler(2008),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401026AM female "research_filter, clinical_filter" FJSF95972 8 115650684 115775381 124698 Gain 3 0.898761 72 1756 chas 95.72 Gain 100 Gain 0 - GainGain- 78 NA NA NA "ChAS,IPN,NXS" 8q23.3 - - 0 - 0 - - - "58172(3|Kidd(2008),Altshuler(2010),Mills(2006))" - - 78 - 0 "124698(16|Teague(2010),Wong(2007),Banerjee(2011),Durbin(2010),Kidd(2008),Altshuler(2010),Pinto(2011),McCarroll(2006),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401020DJ female "research_filter, clinical_filter" IZPX82976 19 20596193 20720868 124676 Loss 1 0.884115 86 1466 chas 94.28 Loss 22.37 Loss 94.3 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "124676(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124676(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401693RC male "research_filter, clinical_filter" VAOW46427 19 20596106 20720705 124600 Loss 1 0.895863 86 1465 chas 94.57 Loss 43.24 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" TOAX48712 19 20596106 20720705 124600 Loss 1 0.899571 86 1465 chas 96.53 Loss 98.23 Loss 99.96 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" VZJA70154 19 20596106 20720705 124600 Loss 1 0.885634 86 1465 chas 94.57 Loss 56.84 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401427CB male "research_filter, clinical_filter" AVGX21589 19 20596106 20720705 124600 Loss 1 0.900479 86 1465 chas 96.53 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400379BB_1 female "research_filter, clinical_filter" GUZB61909 19 20596106 20720705 124600 Loss 1 0.898411 86 1465 chas 96.53 Loss 97.3 Loss 97.3 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401029SD_1 female "research_filter, clinical_filter" EMAP66239 19 20596106 20720705 124600 Loss 1 0.907451 86 1465 chas 94.57 Loss 96.52 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401618HR male "research_filter, clinical_filter" PQCI84759 19 20596106 20720705 124600 Loss 1 0.906691 86 1465 chas 96.53 Loss 96.47 Loss 98.23 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" CBEA57280 19 20596106 20720705 124600 Loss 1 0.902263 86 1465 chas 96.53 Loss 98.23 Loss 98.23 Loss LossLossLoss 76 99.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" AQKH94698 19 20596106 20720705 124600 Loss 1 0.894524 86 1465 chas 94.57 Loss 98.27 Loss 100 Loss LossLossLoss 76 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" OLST13930 19 20596106 20720705 124600 Loss 1 0.902831 86 1465 chas 96.53 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400007RG female "research_filter, clinical_filter" PAIU48992 19 20596106 20720705 124600 Loss 1 0.894072 86 1465 chas 96.53 Loss 98.23 Loss 99.96 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" HOIC14625 19 20596106 20720705 124600 Loss 1 0.892718 86 1465 chas 94.57 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 99.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" SLNP19984 19 20596106 20720705 124600 Loss 1 0.904552 86 1465 chas 96.53 Loss 98.23 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" QUIW42968 19 20596106 20720705 124600 Loss 1 0.900689 86 1465 chas 96.53 Loss 78.89 Loss 98.27 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400926LJ female "research_filter, clinical_filter" UBGH15538 19 20596106 20720705 124600 Loss 1 0.883995 86 1465 chas 96.53 Loss 10.43 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" NFNX93095 19 20596106 20720705 124600 Loss 1 0.882159 86 1465 chas 96.53 Loss 50.99 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401318AV female "research_filter, clinical_filter" ZKCL87954 19 20596106 20720705 124600 Loss 1 0.882773 86 1465 chas 96.53 Loss 0 - 98.23 Loss Loss-Loss 76 NA NA NA "ChAS,IPN,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" BCMG96058 19 20596106 20720705 124600 Loss 1 0.888506 86 1465 chas 96.53 Loss 59.77 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400013TA male "research_filter, clinical_filter" VGND49817 19 20596106 20720705 124600 Loss 1 0.902977 86 1465 chas 96.53 Loss 98.23 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" TZXJ50703 19 20596106 20720705 124600 Loss 1 0.898271 86 1465 chas 96.53 Loss 99.96 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" RJEG79563 19 20596106 20720705 124600 Loss 1 0.89346 86 1465 chas 96.53 Loss 41.33 Loss 99.96 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401543DC male "research_filter, clinical_filter" MWKR26526 19 20596106 20720705 124600 Loss 1 0.888491 86 1465 chas 96.53 Loss 99.96 Loss 100 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400225CJ male "research_filter, clinical_filter" RBTV68848 19 20596106 20720705 124600 Loss 1 0.907305 86 1465 chas 96.53 Loss 96.35 Loss 100 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" YOPA81411 19 20596106 20720705 124600 Loss 1 0.903854 86 1465 chas 96.53 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" FCFF79727 19 20596106 20720705 124600 Loss 1 0.903432 86 1465 chas 96.53 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401384BP male "research_filter, clinical_filter" KKRR12131 19 20596106 20720705 124600 Loss 1 0.898676 86 1465 chas 96.53 Loss 98.23 Loss 98.23 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124600(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124600(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" PAGW82790 11 81067355 81191877 124523 Loss 1 0.927368 112 1121 chas 98.83 Loss 99.41 Loss 99.41 Loss LossLossLoss 98 99.83 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q14.1 - - 0 - 0 - - - "12353(4|Conrad(2009),Matsuzaki(2009),Mills(2006))" "550(6|Pang(2010),Levy(2007),Bentley(2008),Matsuzaki(2009),Mills(2006))" - 98 - 0 "124523(29|Teague(2010),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" XNCW62958 19 20596193 20720705 124513 Loss 1 0.907784 85 1482 chas 96.53 Loss 98.27 Loss 98.27 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124513(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124513(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" CETD95374 19 20596193 20720705 124513 Loss 1 0.885089 85 1482 chas 96.53 Loss 92.16 Loss 100 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "124513(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 76 - 0 "124513(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401331LJ female "research_filter, clinical_filter" HQWW55061 10 135252898 135377265 124368 Gain 3 0.900679 232 538 chas 46.8 Gain 66.57 Gain 100 Gain GainGainGain 110 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124368(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 109 - 0 "124368(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" PAIU48992 10 135252898 135377265 124368 Gain 4 0.934254 232 538 chas 100 Gain 100 Gain 100 Gain GainGainGain 110 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124368(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 109 - 0 "124368(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" WMFM14051 10 135252898 135377265 124368 Gain 3 0.887068 232 538 chas 100 Gain 100 Gain 100 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124368(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 109 - 0 "124368(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400451kh female "research_filter, clinical_filter" APGE11753 10 135252898 135377265 124368 Gain 4 0.948973 232 538 chas 100 Gain 100 Gain 100 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124368(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 109 - 0 "124368(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" VQFC85923 10 135252898 135377265 124368 Gain 3 0.893958 232 538 chas 55.24 Gain 61.19 Gain 100 Gain GainGainGain 110 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124368(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 109 - 0 "124368(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" GQSZ37539 X 121280464 121404773 124310 Loss 1 0.908818 64 1973 chas 97.65 Loss 0 - 0 - Loss-- 73 90.09 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - 11138(1|Conrad(2009)) - - 73 - 0 "49992(7|Teague(2010),Kidd(2008),Durbin(2010),Shaikh(2009),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" NRTH35283 10 135252998 135377265 124268 Gain 3 0.899458 230 542 chas 66.41 Gain 96.11 Gain 100 Gain GainGainGain 110 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124268(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 108 - 0 "124268(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401052BM female "research_filter, clinical_filter" UKBP75340 10 135252998 135377265 124268 Gain 3 0.890762 230 542 chas 100 Gain 100 Gain 100 Gain GainGainGain 110 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124268(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 108 - 0 "124268(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" PDHC59420 16 14929646 15053870 124225 Loss 1 0.922994 27 4777 chas 0 - 3.24 Loss 3.3 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - "78680(5|Kidd(2008),Tuzun(2005))" "124225(29|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 96 33 - 0 "124225(115|Teague(2010),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Ju(2010),Kim(2009),De(Smith_2007),Wheeler(2008),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401457WK male "research_filter, clinical_filter" JUSU56143 X 149804847 149929055 124209 Gain 3 0.902813 558 222 chas 78.62 Gain 0 - 0 - Gain-- 87 85.07 Gain "BS,GTC,IP6" "ChAS,IPN" Xq28 - "MTM1,MTMR1" 2 "MTM1,MTMR1" 2 MTM1 - - - "1535(6|Conrad(2009),Ahn(2009),Matsuzaki(2009))" - 86 - 0 "104967(21|Conrad(2009),Ahn(2009),Teague(2010),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" ZRKC95930 X 42967167 43091330 124164 Loss 1 0.937545 58 2178 chas 99.32 Loss 0 - 0 - Loss-- 72 NA NA NA "ChAS,IPN" Xp11.3 - - 0 - 0 - - - "111423(5|de Smith(2007),Shaikh(2009))" - - 72 - 0 "124164(10|Kidd(2008),Shaikh(2009),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" LHPN45961 16 14929738 15053870 124133 Loss 1 0.929094 26 4965 chas 0 - 3.3 Loss 3.3 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - "78680(5|Kidd(2008),Tuzun(2005))" "124133(29|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 96 33 - 0 "124133(115|Teague(2010),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Ju(2010),Kim(2009),De(Smith_2007),Wheeler(2008),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400603CJ male "research_filter, clinical_filter" QJEX76408 16 14929738 15053870 124133 Loss 1 0.937017 26 4965 chas 0 - 4.11 Loss 4.28 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 16p13.11 - "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 "NPIP,NOMO1,MIR3179-2,MIR3179-3,MIR3179-1,MIR3180-2,MIR3180-3,MIR3180-1" 8 - - "78680(5|Kidd(2008),Tuzun(2005))" "124133(29|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009))" - 96 33 - 0 "124133(115|Teague(2010),Redon(2006),Perry(2008),Kidd(2010b),Alkan(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Campbell(2011),Tuzun(2005),Pinto(2011),Park(2010),Ju(2010),Kim(2009),De(Smith_2007),Wheeler(2008),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400413FJ female "research_filter, clinical_filter" YBMF74034 3 1266878 1390985 124108 Gain 3 0.903811 165 756 chas 97.32 Gain 99.21 Gain 100 Gain GainGainGain 152 99.5 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.3 - CNTN6 1 CNTN6 1 - - - "124108(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Bentley(2008),Pinto(2007),Simon-Sanchez(2007),Mills(2006))" "1059(3|Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 152 - 0 "124108(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2007),Shaikh(2009),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" NFGH10073 13 57703974 57828079 124106 Loss 1 0.939158 88 1426 chas 85.48 Loss 61.59 Loss 92.2 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.1 - "PRR20A,PRR20B,PRR20C,PRR20D,PRR20E" 5 "PRR20A,PRR20B,PRR20C,PRR20D,PRR20E" 5 - - - "124106(72|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Bentley(2008),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Wang(2007),Ahn(2009),McKernan(2009),Cooper(2008),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "2476(6|Park(2010),Matsuzaki(2009))" 24 74 - 0 "124106(185|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" BOFG10595 6 257049 381137 124089 Loss 1 0.893973 226 551 chas 100 Loss 69.74 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124089(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124089(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400230TB male "research_filter, clinical_filter" KQIO31508 6 257049 381137 124089 Loss 1 0.907227 226 551 chas 83.42 Loss 71.99 Loss 98.95 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124089(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124089(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400507VD male "research_filter, clinical_filter" KAAS48951 10 135252998 135377075 124078 Gain 3 0.896036 227 549 chas 89.74 Gain 70.64 Gain 100 Gain GainGainGain 109 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "124078(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 108 - 0 "124078(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401504RJ male "research_filter, clinical_filter" SYHV89014 6 257065 381137 124073 Loss 1 0.905919 225 553 chas 100 Loss 66.56 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" BXCR78538 6 257065 381137 124073 Loss 1 0.905987 225 553 chas 3.39 Loss 100 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401050GS female "research_filter, clinical_filter" XHZD61935 6 257065 381137 124073 Loss 1 0.907657 225 553 chas 99.66 Loss 93.74 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" VVRJ19010 6 257065 381137 124073 Loss 1 0.896835 225 553 chas 83.43 Loss 72.58 Loss 99.93 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" KKRR12131 6 257065 381137 124073 Loss 1 0.897183 225 553 chas 83.43 Loss 70.04 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" CVUT48167 6 257065 381137 124073 Loss 1 0.899052 225 553 chas 83.43 Loss 72.91 Loss 97.34 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401898DS male "research_filter, clinical_filter" ZIPB72793 6 257065 381137 124073 Gain 3 0.908155 225 553 chas 0 - 79.12 Gain 93.74 Gain #NAME? 114 99.77 Gain "BS,GTC,IP6" "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401889FR male "research_filter, clinical_filter" INSC49339 6 257065 381137 124073 Loss 1 0.896334 225 553 chas 0 - 69.58 Loss 99.82 Loss #NAME? 114 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "124073(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "124073(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401334DH female "research_filter, clinical_filter" UKBP75340 1 145206609 145330517 123909 Gain 3 0.877472 96 1304 chas 0 - 2.37 Gain 0 - -Gain- 28 0 - - "ChAS,NXS" 1q21.1 - "NOTCH2NL,NBPF10" 2 "NOTCH2NL,NBPF10" 2 - - - "123909(25|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Kidd(2008),Cooper(2008),Tuzun(2005),Park(2010),Wheeler(2008),Simon-Sanchez(2007))" "927(4|Bentley(2008),Matsuzaki(2009),Mills(2006))" 100 28 - 0 "123909(108|Kidd(2010b),Teague(2010),Korbel(2007),Ju(2010),Perry(2008),Conrad(2009),Tuzun(2005),Locke(2006),Bentley(2008),Cooper(2008),Kidd(2008),Wilson(2010),Wong(2007),Durbin(2010),Perry(2008b),Pinto(2011),Park(2010),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400059SV female "research_filter, clinical_filter" ISXJ62958 10 46996612 47120449 123838 Loss 1 0.85829 170 732 chas 0 - 0 - 0 - --- 120 25.56 Loss GTC ChAS 10q11.22 - "GPRIN2,LOC643650,PPYR1" 3 "GPRIN2,LOC643650,PPYR1" 3 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "123838(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" - 119 - 0 "123838(235|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401956DQ male clinical_filter JVBB89605 6 257340 381137 123798 Loss 1 0.890452 224 555 chas 100 Loss 40.43 Loss 100 Loss LossLossLoss 114 97.55 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" QCXI89270 6 257340 381137 123798 Loss 1 0.906343 224 555 chas 100 Loss 71.76 Loss 83.73 Loss LossLossLoss 114 100 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" CRTB70467 6 257340 381137 123798 Loss 1 0.881953 224 555 chas 7.22 Loss 88.34 Loss 100 Loss LossLossLoss 114 100 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400577MK female "research_filter, clinical_filter" YKLI59783 6 257340 381137 123798 Loss 1 0.894856 224 555 chas 83.39 Loss 66.7 Loss 74.61 Loss LossLossLoss 114 100 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" ZRRL85494 6 257340 381137 123798 Loss 1 0.900578 224 555 chas 3.39 Loss 93.85 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" WNMH95182 6 257340 381137 123798 Loss 1 0.908904 224 555 chas 36.28 Loss 72.79 Loss 99.93 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" LSSN67820 6 257340 381137 123798 Loss 1 0.907081 224 555 chas 36.28 Loss 66.69 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" CVWU93815 6 257340 381137 123798 Loss 1 0.895904 224 555 chas 99.89 Loss 75.99 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401253MC female "research_filter, clinical_filter" ZBJH32901 6 257340 381137 123798 Loss 1 0.908072 224 555 chas 99.89 Loss 99.27 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401900RJ female "research_filter, clinical_filter" QDNW53844 6 257340 381137 123798 Loss 1 0.893055 224 555 chas 99.89 Loss 73.14 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" WGSV83254 6 257340 381137 123798 Loss 1 0.897232 224 555 chas 83.39 Loss 72.85 Loss 100 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" AEUU95723 6 257340 381137 123798 Loss 1 0.902465 224 555 chas 83.39 Loss 70.22 Loss 98.95 Loss LossLossLoss 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402073LQ male "research_filter, clinical_filter" OULL87238 6 257340 381137 123798 Gain 4 0.914774 224 555 chas 11.75 Gain 99.79 Gain 99.48 Gain GainGainGain 114 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" ZMNN35179 6 257340 381137 123798 Gain 4 0.926395 224 555 chas 0 - 100 Gain 100 Gain #NAME? 114 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123798(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123798(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400430KV male "research_filter, clinical_filter" SXNO44692 6 257340 380993 123654 Gain 3 0.881252 220 564 chas 0 - 93.03 Gain 0 - -Gain- 113 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "123654(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 113 - 0 "123654(70|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401949MN male "research_filter, clinical_filter" EZOV24426 6 161693085 161816572 123488 Gain 4 0.945294 98 1273 chas 100 Gain 100 Gain 100 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - "AGPAT4,PARK2" 2 "AGPAT4,PARK2" 2 PARK2 - - "123488(7|Conrad(2009),Matsuzaki(2009),Ju(2010),Pinto(2007),Park(2010),Kim(2009))" "1052(9|Levy(2007),Matsuzaki(2009))" - 73 PARK2#asd_candidate 1 "80668(25|Teague(2010),Wong(2007),Conrad(2009),Ju(2010),Durbin(2010),Kidd(2008),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400454RE male "research_filter, clinical_filter" UKYN40755 14 22837283 22960757 123475 Gain 3 0.873191 160 776 chas 0 - 0 - 0 - --- 103 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 1984(1|Ahn(2009)) "123475(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 103 - 0 "123475(100|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 401969DR male clinical_filter CHSN35204 1 195393524 195516792 123269 Loss 1 0.910737 76 1643 chas 88.96 Loss 92.95 Loss 92.98 Loss LossLossLoss 73 89.03 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.3 - - 0 - 0 - - - "59322(7|Conrad(2009),McCarroll(2008),Altshuler(2010),Perry(2008),Matsuzaki(2009))" - - 73 - 0 "123269(21|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Durbin(2010),Altshuler(2010),Campbell(2011),Pinto(2011),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" RBTV68848 4 69362572 69485827 123256 Gain 3 0.896182 51 2465 chas 96 Gain 89.87 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - "UGT2B17,TMPRSS11E" 2 "UGT2B17,TMPRSS11E" 2 - - - "123256(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 53 67 - 0 "123256(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" JVBB89605 4 69362573 69485827 123255 Gain 3 0.892574 50 2515 chas 96.29 Gain 58.36 Gain 0 - GainGain- 67 0 - - "ChAS,IPN,NXS" 4q13.2 - "UGT2B17,TMPRSS11E" 2 "UGT2B17,TMPRSS11E" 2 - - - "123255(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 53 67 - 0 "123255(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_no 400650RM male "research_filter, clinical_filter" JITZ20982 5 46242357 46365514 123158 Loss 1 0.890379 28 4561 chas 0 - 100 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "123158(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "123158(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401180GR male "research_filter, clinical_filter" RYUR49963 15 93933300 94056266 122967 Loss 1 0.932907 126 983 chas 93.83 Loss 94.35 Loss 94.36 Loss LossLossLoss 139 90.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.1 - - 0 - 0 - - - "122967(3|Gusev(2009),Wheeler(2008),Shaikh(2009))" - - 139 - 0 "122967(10|Itsara(2009),Gusev(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400177SJ male "research_filter, clinical_filter" AQKH94698 1 148539255 148662197 122943 Loss 1 0.862498 52 2410 chas 49.91 Loss 0 - 0 - Loss-- 21 0 - - "ChAS,IPN" 1q21.2 - "NBPF16,NBPF15,PPIAL4E" 3 "NBPF16,NBPF15,PPIAL4E" 3 - - - "122943(23|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Pinto(2007),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" - 100 21 - 0 "122943(56|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Locke(2006),Durbin(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_no 400955BE male "research_filter, clinical_filter" QKSF16477 11 50472473 50595389 122917 Loss 1 0.897981 24 5344 chas 0 - 39.51 Loss 95.74 Loss #NAME? 17 NA NA NA "ChAS,NXS,PTK" 11p11.12 - - 0 - 0 - - - "122917(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 17 - 0 "122917(27|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401749DJ male research_filter QDNW53844 11 50472473 50595389 122917 Loss 1 0.879185 24 5344 chas 0 - 42.02 Loss 0 - -Loss- 17 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "122917(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 17 - 0 "122917(27|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400729HC female research_filter HAAE15834 19 20593476 20716376 122901 Loss 1 0.899388 86 1445 chas 97.85 Loss 83.39 Loss 97.82 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122901(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 3 77 - 0 "122901(310|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" MWRB65708 2 199713039 199835908 122870 Gain 3 0.909531 70 1780 chas 93.27 Gain 99.95 Gain 0 - GainGain- 67 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2q33.1 - - 0 - 0 - "122870#1%""2q33.1 deletion syndrome"":8281852" - - "1223(3|Park(2010),Levy(2007))" - 67 - 0 "16580(13|Park(2010),Teague(2010),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400267GD female "research_filter, clinical_filter" TUPR75049 2 35518287 35641094 122808 Loss 1 0.912332 56 2232 chas 98.28 Loss 99.13 Loss 96.96 Loss LossLossLoss 108 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "117927(19|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005),Jakobsson(2008),Shaikh(2009))" - - 108 - 0 "122808(47|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Campbell(2011),Pinto(2011),Jakobsson(2008),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" IREV30826 10 17938195 18060950 122756 Loss 1 0.880667 12 11159 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236" 2 "MRC1,TMEM236" 2 - - - - - 59 6 - 0 "122756(6|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401413RG male - WFGA96432 6 254283 376816 122534 Loss 1 0.85589 211 583 chas 44.44 Loss 0 - 0 - Loss-- 109 NA NA NA "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "122534(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 109 - 0 "122534(63|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401493HC male "research_filter, clinical_filter" ISVP82924 3 162528531 162651027 122497 Loss 1 0.87997 24 5325 chas 0 - 0 - 0 - --- 84 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "122497(32|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 84 - 0 "122497(254|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401400NP male - VQFC85923 19 20598430 20720868 122439 Loss 1 0.893051 85 1457 chas 96.34 Loss 100 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - "ZNF826P,ZNF737" 2 "ZNF826P,ZNF737" 2 - - - "122439(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122439(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" APGE11753 8 310977 433405 122429 Gain 3 0.90379 214 574 chas 40.02 Gain 98.46 Gain 100 Gain GainGainGain 85 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - FBXO25 1 FBXO25 1 - - - "108344(7|Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),Perry(2008))" "657(4|Pang(2010),Matsuzaki(2009),Perry(2008))" 54 85 - 0 "122429(27|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Alkan(2009),Pinto(2007),Perry(2008b),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" UZKE50615 19 20598430 20720705 122276 Loss 1 0.888872 84 1473 chas 96.37 Loss 98.23 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400789KV male "research_filter, clinical_filter" YWQF89241 19 20598430 20720705 122276 Loss 1 0.899446 84 1473 chas 96.47 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" XKMM87171 19 20598430 20720705 122276 Loss 1 0.890705 84 1473 chas 96.37 Loss 92.09 Loss 77.76 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400634MP male "research_filter, clinical_filter" OEHV36421 19 20598430 20720705 122276 Loss 1 0.885722 84 1473 chas 96.37 Loss 100 Loss 100 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401997HB male "research_filter, clinical_filter" AGIM53957 19 20598430 20720705 122276 Loss 1 0.893674 84 1473 chas 96.47 Loss 77.86 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400564SN female "research_filter, clinical_filter" WUMM65746 19 20598430 20720705 122276 Loss 1 0.890472 84 1473 chas 96.47 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" AZMC27188 19 20598430 20720705 122276 Loss 1 0.899691 84 1473 chas 96.47 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" UJRI14149 19 20598430 20720705 122276 Loss 1 0.882739 84 1473 chas 96.47 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400227MM female "research_filter, clinical_filter" OSRU53198 19 20598430 20720705 122276 Loss 1 0.885279 84 1473 chas 96.37 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400854SG male "research_filter, clinical_filter" IELV11932 19 20598430 20720705 122276 Loss 1 0.9004 84 1473 chas 96.47 Loss 98.24 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400869BK female "research_filter, clinical_filter" RZMS47755 19 20598430 20720705 122276 Loss 1 0.88322 84 1473 chas 96.47 Loss 43.71 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400387HE female "research_filter, clinical_filter" ROAF64821 19 20598430 20720705 122276 Loss 1 0.888496 84 1473 chas 96.37 Loss 0 - 100 Loss Loss-Loss 75 NA NA NA "ChAS,IPN,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" YJHX17222 19 20598430 20720705 122276 Loss 1 0.887931 84 1473 chas 96.47 Loss 67.55 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" BHQW11777 19 20598430 20720705 122276 Loss 1 0.887098 84 1473 chas 96.37 Loss 62.6 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" VVPL10652 19 20598430 20720705 122276 Loss 1 0.894764 84 1473 chas 96.47 Loss 100 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400871CM female "research_filter, clinical_filter" ZQFY18932 19 20598430 20720705 122276 Loss 1 0.892096 84 1473 chas 96.47 Loss 99.99 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" SEZK29585 19 20598430 20720705 122276 Loss 1 0.892144 84 1473 chas 96.47 Loss 96.01 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" MKDG25249 19 20598430 20720705 122276 Loss 1 0.888758 84 1473 chas 96.47 Loss 96.42 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401420PJ male "research_filter, clinical_filter" DEYQ16754 19 20598430 20720705 122276 Loss 1 0.883969 84 1473 chas 96.47 Loss 100 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401825TH female "research_filter, clinical_filter" IZZO20602 19 20598430 20720705 122276 Loss 1 0.892659 84 1473 chas 96.47 Loss 98.24 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" RLVK87046 19 20598430 20720705 122276 Loss 1 0.896241 84 1473 chas 96.47 Loss 99.94 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" TEQK36134 19 20598430 20720705 122276 Loss 1 0.878756 84 1473 chas 96.47 Loss 98.23 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400908PJ female "research_filter, clinical_filter" QRNV11451 19 20598430 20720705 122276 Loss 1 0.890537 84 1473 chas 96.47 Loss 98.24 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" YTCX24219 19 20598430 20720705 122276 Loss 1 0.886515 84 1473 chas 96.47 Loss 84.81 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" FSRW48279 19 20598430 20720705 122276 Loss 1 0.895804 84 1473 chas 96.47 Loss 76.32 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401385BB male "research_filter, clinical_filter" NFGH10073 19 20598430 20720705 122276 Loss 1 0.903185 84 1473 chas 96.47 Loss 100 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" SFLX52247 19 20598430 20720705 122276 Loss 1 0.893545 84 1473 chas 96.47 Loss 98.18 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" FSLR52955 19 20598430 20720705 122276 Loss 1 0.896561 84 1473 chas 96.47 Loss 93.85 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" INSC49339 19 20598430 20720705 122276 Loss 1 0.898261 84 1473 chas 96.47 Loss 81.96 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" DMKI43381 19 20598430 20720705 122276 Loss 0 0.97052 84 1473 chas 96.47 Loss 98.24 Loss 88.09 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" TGGX58243 19 20598430 20720705 122276 Loss 1 0.896622 84 1473 chas 96.47 Loss 98.18 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400942HR male "research_filter, clinical_filter" TUOI10912 19 20598430 20720705 122276 Loss 1 0.892983 84 1473 chas 96.47 Loss 98.18 Loss 98.24 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122276(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 75 - 0 "122276(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" ORNW53006 X 47879111 48001283 122173 Loss 1 0.929657 97 1272 chas 82.34 Loss 0 - 0 - Loss-- 85 89.27 Loss "BS,GTC,IP6" "ChAS,IPN" Xp11.23 - "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 - - 8986(1|Ahn(2009)) "122173(33|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 718(1|Perry(2008)) 40 84 - 0 "122173(52|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400494ML female "research_filter, clinical_filter" IAET85141 19 20598536 20720705 122170 Loss 1 0.880808 82 1508 chas 96.45 Loss 98.24 Loss 98.24 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122170(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "122170(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401136LB male "research_filter, clinical_filter" EJHE40652 19 20598536 20720705 122170 Loss 1 0.887956 82 1508 chas 96.45 Loss 92.7 Loss 100 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122170(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "122170(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" CWFZ39975 19 20598536 20720705 122170 Loss 1 0.899684 82 1508 chas 96.47 Loss 98.23 Loss 100 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "122170(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "122170(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" XNUA56302 6 62118670 62240630 121961 Loss 1 0.905932 12 11087 chas 0 - 0 - 0 - --- 13 0 - - ChAS 6q11.1 50001(1|clone) - 0 - 0 - - - "121961(13|Itsara(2009),Sebat(2004),Matsuzaki(2009),Conrad(2009))" - 8 13 - 0 "121961(27|Itsara(2009),Conrad(2009),Durbin(2010),Shaikh(2009),Sebat(2004))" FALSE TRUE ipn_no algo_no affy6_no 400344DR_1 male - PYWH93436 19 20598756 20720705 121950 Loss 0 0.967282 80 1543 chas 96.46 Loss 100 Loss 88.06 Loss LossLossLoss 73 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "121950(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 73 - 0 "121950(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400270BD female "research_filter, clinical_filter" QRST17911 19 20598756 20720705 121950 Loss 0 0.964444 80 1543 chas 96.46 Loss 98.24 Loss 96.35 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "121950(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 73 - 0 "121950(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401016IT male "research_filter, clinical_filter" VRMG83827 10 27587518 27709398 121881 Loss 1 0.908538 120 1024 chas 80.98 Loss 91.11 Loss 96.42 Loss LossLossLoss 95 NA NA NA "ChAS,IPN,NXS,PTK" 10p12.1 - PTCHD3 1 PTCHD3 1 - - - "121881(27|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 963(1|Matsuzaki(2009)) 46 95 - 0 "121881(75|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Campbell(2011),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Kidd(2010b),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401769CR male "research_filter, clinical_filter" MQVK42355 10 27587518 27709398 121881 Loss 1 0.924673 120 1024 chas 81.57 Loss 97.56 Loss 97.56 Loss LossLossLoss 95 NA NA NA "ChAS,IPN,NXS,PTK" 10p12.1 - PTCHD3 1 PTCHD3 1 - - - "121881(27|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Levy(2007),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 963(1|Matsuzaki(2009)) 46 95 - 0 "121881(75|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Campbell(2011),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Kidd(2010b),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401203MP female "research_filter, clinical_filter" SYHV89014 9 5106692 5228432 121741 Gain 3 0.901267 137 895 chas 92.43 Gain 99.95 Gain 98.44 Gain GainGainGain 106 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.1 - "INSL6,JAK2" 2 "INSL6,JAK2" 2 JAK2 - - "9120(13|McCarroll(2005),Conrad(2009),Korbel(2007),Matsuzaki(2009))" 901(1|Matsuzaki(2009)) - 105 - 0 "121741(15|Conrad(2009),Korbel(2007),Itsara(2009),Durbin(2010),Wilson(2010),Wong(2007),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" CHNV74218 4 69436623 69558258 121636 Loss 1 0.926652 60 2061 chas 86.61 Loss 41.96 Loss 39.75 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "116916(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 41 41 - 0 "121636(313|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400837HN female "research_filter, clinical_filter" QRLG88085 X 134752420 134873927 121508 Gain 4 0.91661 404 301 chas 89.9 Gain 0 - 0 - Gain-- 77 98.78 Gain "BS,GTC,IP6" "ChAS,IPN" Xq26.3 - "CT45A1,CT45A2,CT45A4" 3 "CT45A1,CT45A2,CT45A4" 3 - - 26077(2|Kidd(2008)) "121508(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" 784(1|Perry(2008)) 53 77 - 0 "121508(39|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400759FV female "research_filter, clinical_filter" RKMW41925 16 28689086 28810325 121240 Loss 1 0.894031 16 8082 chas 0 - 0 - 0 - --- 4 0 - - ChAS 16p11.2 - "EIF3CL,EIF3C" 2 "EIF3CL,EIF3C" 2 - "121240#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" - "121240(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Pang(2010),Kidd(2008),Cooper(2008))" - 100 4 - 0 "121240(35|Conrad(2009),Redon(2006),Perry(2008),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),Cooper(2008),Pinto(2011),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400323AA female - SRJV59260 21 29238988 29359939 120952 Loss 1 0.910498 64 1919 chas 91.83 Loss 91.96 Loss 91.96 Loss LossLossLoss 54 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q21.3 - - 0 - 0 - - - 1034(1|Matsuzaki(2009)) - 100 53 - 0 "120952(5|Itsara(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" LNYN65073 Y 24872478 24993236 120759 Loss 0 0.900192 70 1750 chas 100 Loss 0 - 0 - Loss-- 25 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "120759#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 25 - 0 "120759(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401924ST male "research_filter, clinical_filter" MECH38806 Y 24872478 24993236 120759 Loss 0 0.894154 70 1750 chas 100 Loss 0 - 0 - Loss-- 25 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "120759#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 25 - 0 "120759(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" SPYW97422 17 36283807 36404555 120749 Loss 1 0.910437 30 4163 chas 0 - 89.92 Loss 0 - -Loss- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400899NK female "research_filter, clinical_filter" FPUC66465 17 36283807 36404555 120749 Loss 1 0.941838 30 4163 chas 0 - 99.84 Loss 0 - -Loss- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400827MM male "research_filter, clinical_filter" UBHC61833 17 36283807 36404555 120749 Loss 1 0.877892 30 4163 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400768MN female clinical_filter IZON54653 17 36283807 36404555 120749 Loss 1 0.876982 30 4163 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400572PJ male clinical_filter SSWV37655 17 36283807 36404555 120749 Loss 1 0.869493 30 4163 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401706BJ female clinical_filter PAFA79672 17 36283807 36404555 120749 Loss 1 0.888916 30 4163 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 402033WD male clinical_filter SEHC73357 17 36283807 36404555 120749 Gain 4 0.930629 30 4163 chas 0 - 100 Gain 0 - -Gain- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 402019MC male research_filter XSMN99460 17 36283807 36404555 120749 Gain 4 0.936107 30 4163 chas 0 - 100 Gain 0 - -Gain- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401235IA male research_filter EJLX27201 17 36283807 36404555 120749 Gain 3 0.905636 30 4163 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400545EW_1 female - TLUO25428 17 36283807 36404555 120749 Gain 3 0.901378 30 4163 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120749(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120749(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401836SI female - YBSU20689 9 104763565 104884291 120727 Loss 1 0.910706 72 1700 chas 100 Loss 100 Loss 100 Loss LossLossLoss 141 NA NA NA "ChAS,IPN,NXS,PTK" 9q31.1 - - 0 - 0 - - - "120727(7|Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007))" - - 141 - 0 "120727(17|Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009),Pinto(2011),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" DQOB10223 6 151732900 151853590 120691 Gain 3 0.888597 124 981 chas 55.37 Gain 82.3 Gain 100 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 6q25.1 - "C6orf97,C6orf211,RMND1" 3 "C6orf97,C6orf211,RMND1" 3 - - - "1572(2|Conrad(2009),McKernan(2009))" - 3 64 - 0 "5100(5|Conrad(2009),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401567BD male "research_filter, clinical_filter" GQSZ37539 4 135412074 135532610 120537 Loss 1 0.917052 64 1913 chas 80.47 Loss 91.78 Loss 91.78 Loss LossLossLoss 61 91.32 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "44274(18|Wang(2007),Ahn(2009),Korbel(2007),Ju(2010),Matsuzaki(2009),Conrad(2009),Wang(2008),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Kim(2009),Mills(2006))" "1785(3|Levy(2007),Matsuzaki(2009))" - 61 - 0 "120537(127|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Ju(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),Wang(2007),Pinto(2011),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" OTAJ32230 10 135252179 135372601 120423 Gain 3 0.905683 230 525 chas 88.5 Gain 99.35 Gain 100 Gain GainGainGain 106 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "120423(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 106 - 0 "120423(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400785AK female "research_filter, clinical_filter" XOPW74186 10 135252179 135372601 120423 Gain 3 0.903993 230 525 chas 99.86 Gain 100 Gain 100 Gain GainGainGain 106 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "120423(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 106 - 0 "120423(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" PRHX42947 10 135252179 135372601 120423 Gain 3 0.894541 230 525 chas 88.5 Gain 88.59 Gain 100 Gain GainGainGain 106 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "120423(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 106 - 0 "120423(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400429YF female "research_filter, clinical_filter" JSHH93314 10 135252179 135372601 120423 Gain 3 0.88898 230 525 chas 94.64 Gain 80.83 Gain 100 Gain GainGainGain 106 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "120423(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 106 - 0 "120423(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" VBEF49630 17 36283807 36404138 120332 Loss 1 0.893421 29 4297 chas 0 - 44.96 Loss 0 - -Loss- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120332(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120332(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400022WA female "research_filter, clinical_filter" NSZE63198 17 36283807 36404138 120332 Loss 1 0.871243 29 4297 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120332(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120332(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400724CD male clinical_filter RMNM29531 17 36283807 36404136 120330 Loss 1 0.889598 28 4456 chas 0 - 41.89 Loss 0 - -Loss- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 401068SD female "research_filter, clinical_filter" LLZZ76842 17 36283807 36404136 120330 Loss 1 0.905097 28 4456 chas 0 - 86.08 Loss 0 - -Loss- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400354TJ female "research_filter, clinical_filter" YMTT86375 17 36283807 36404136 120330 Loss 1 0.90466 28 4456 chas 0 - 41.89 Loss 0 - -Loss- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400797ST male "research_filter, clinical_filter" ISVP82924 17 36283807 36404136 120330 Loss 1 0.89552 28 4456 chas 0 - 41.89 Loss 0 - -Loss- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 401400NP male "research_filter, clinical_filter" ZIPB72793 17 36283807 36404136 120330 Loss 1 0.867368 28 4456 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401889FR male clinical_filter EDMQ40540 17 36283807 36404136 120330 Loss 1 0.876575 28 4456 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401589HP male clinical_filter ZXNE12672 17 36283807 36404136 120330 Gain 3 0.904753 28 4456 chas 0 - 78.73 Gain 0 - -Gain- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400070PC female research_filter IAEL45337 17 36283807 36404136 120330 Gain 4 0.923358 28 4456 chas 0 - 100 Gain 0 - -Gain- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400424LN female research_filter QVOH35939 17 36283807 36404136 120330 Gain 3 0.897159 28 4456 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "120330(20|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "120330(155|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400291VJ male - TPCN38834 11 33383085 33503271 120187 Gain 3 0.895856 96 1265 chas 100 Gain 81.16 Gain 100 Gain GainGainGain 91 NA NA NA "ChAS,IPN,NXS,PTK" 11p13 - - 0 - 0 - - - - "821(2|Levy(2007),McKernan(2009))" - 91 - 0 "120187(19|Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" TGGX58243 7 11136377 11256502 120126 Loss 1 0.921036 142 851 chas 99.99 Loss 96.08 Loss 98.05 Loss LossLossLoss 100 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.3 - PHF14 1 PHF14 1 - - - - 788(1|Ahn(2009)) - 100 - 0 "120126(13|Ahn(2009),Wong(2007),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400942HR male "research_filter, clinical_filter" RYTQ14327 14 107008130 107128165 120036 Loss 1 0.861103 64 1905 chas 99.99 Loss 0 - 0 - Loss-- 66 72.75 Loss IP6 "ChAS,IPN" 14q32.33 - - 0 - 0 - - - "120036(53|Sebat(2004),Ahn(2009),Matsuzaki(2009),Wang(2007),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),Park(2010),Shaikh(2009))" "34466(4|Wang(2008),Bentley(2008))" 20 66 - 0 "120036(237|Conrad(2009),Ahn(2009),Wong(2007),Wang(2008),Wang(2007),Itsara(2009),Locke(2006),Iafrate(2004),Durbin(2010),Bentley(2008),Kidd(2008),Korbel(2007),Simon-Sanchez(2007),Sebat(2004),Sharp(2005),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" ZMDC73313 X 101624580 101744584 120005 Loss 1 0.871839 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401165SB female - EXZC47846 X 101624580 101744584 120005 Loss 1 0.869838 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400468OB female - LTTD14271 X 101624580 101744584 120005 Loss 1 0.880151 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400050RL female - AYLS39762 X 101624580 101744584 120005 Loss 1 0.875873 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400663MD female - IAEL45337 X 101624580 101744584 120005 Loss 1 0.869906 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400424LN female - VGHI55406 X 101624580 101744584 120005 Loss 1 0.889583 12 10909 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400221VM female - REUG17486 X 101624580 101744584 120005 Loss 1 0.876093 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401576WC female - OPKR54750 X 101624580 101744584 120005 Loss 1 0.869142 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401822TL female - OWWC21327 X 101624580 101744584 120005 Loss 1 0.881786 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400547BS female - OOSY20649 X 101624580 101744584 120005 Loss 1 0.877856 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401817MC female - VUUO47049 X 101624580 101744584 120005 Loss 1 0.872403 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400533BB female - IORF34772 X 101624580 101744584 120005 Loss 1 0.886219 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400261RN female - JWHR52164 X 101624580 101744584 120005 Loss 1 0.871537 12 10909 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 7 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400984LD female - AQKH94698 11 82589671 82709630 119960 Gain 3 0.887991 106 1142 chas 83.29 Gain 95.74 Gain 0 - GainGain- 60 97.18 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 11q14.1 - "PRCP,C11orf82,RAB30" 3 "PRCP,C11orf82,RAB30" 3 - - - 119960(1|de Smith(2007)) "125(2|Bentley(2008),Mills(2006))" - 60 - 0 "119960(12|Durbin(2010),Mills(2006),De(Smith_2007),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" MRIL85955 11 82589671 82709630 119960 Gain 3 0.884663 106 1142 chas 96.66 Gain 98.47 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 11q14.1 - "PRCP,C11orf82,RAB30" 3 "PRCP,C11orf82,RAB30" 3 - - - 119960(1|de Smith(2007)) "125(2|Bentley(2008),Mills(2006))" - 60 - 0 "119960(12|Durbin(2010),Mills(2006),De(Smith_2007),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400705KK male "research_filter, clinical_filter" ZRKC95930 14 44820190 44939936 119747 Gain 3 0.901709 88 1376 chas 82.44 Gain 96.91 Gain 94.98 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "119747(3|Itsara(2009),Pinto(2007),Jakobsson(2008))" 942(1|McKernan(2009)) - 72 - 0 "119747(12|Teague(2010),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" SXXB40252 10 135252898 135372601 119704 Gain 3 0.902869 228 527 chas 72.38 Gain 80.78 Gain 100 Gain GainGainGain 104 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,LOC619207,CYP2E1" 3 "SYCE1,LOC619207,CYP2E1" 3 - - - "119704(66|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Conrad(2009),Pinto(2007),Ju(2010),Shaikh(2009),Jakobsson(2008),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 795(1|Levy(2007)) 3 104 - 0 "119704(141|Teague(2010),Korbel(2007),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes NA 401495NR male "research_filter, clinical_filter" LYLG55293 12 8004357 8124048 119692 Gain 3 0.900312 97 1246 chas 99.94 Gain 100 Gain 100 Gain GainGainGain 64 99.95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119692(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119692(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" ZJYL67451 12 8004357 8124048 119692 Gain 3 0.902937 97 1246 chas 95.67 Gain 96.94 Gain 96.94 Gain GainGainGain 64 99.83 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119692(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119692(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401025SM male "research_filter, clinical_filter" OBHQ36250 12 8004357 8124048 119692 Gain 3 0.896035 97 1246 chas 99.31 Gain 99.09 Gain 99.97 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119692(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119692(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401011PJ female "research_filter, clinical_filter" IPKK73915 12 8004412 8124048 119637 Gain 3 0.897798 96 1259 chas 85.92 Gain 100 Gain 100 Gain GainGainGain 64 99.87 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" LAYE10086 12 8004412 8124048 119637 Gain 3 0.900827 96 1259 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 64 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" TOAX48712 12 8004412 8124048 119637 Gain 3 0.883915 96 1259 chas 99.32 Gain 99.12 Gain 0 - GainGain- 64 99.32 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" CAEK98371 12 8004412 8124048 119637 Gain 3 0.905159 96 1259 chas 95.67 Gain 100 Gain 100 Gain GainGainGain 64 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" SKLJ58672 12 8004412 8124048 119637 Loss 1 0.920634 96 1259 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 64 99.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" NBJX82400 12 8004412 8124048 119637 Gain 3 0.886469 96 1259 chas 99.32 Gain 80.21 Gain 0 - GainGain- 64 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400014SL female "research_filter, clinical_filter" LFNU24334 12 8004412 8124048 119637 Gain 4 0.938182 96 1259 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 64 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400471YS male "research_filter, clinical_filter" ZYTR30302 12 8004412 8124048 119637 Gain 3 0.899003 96 1259 chas 99.32 Gain 96.94 Gain 100 Gain GainGainGain 64 99.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400356MC female "research_filter, clinical_filter" THXY16685 12 8004412 8124048 119637 Gain 4 0.939971 96 1259 chas 100 Gain 100 Gain 100 Gain GainGainGain 64 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" AOYC46859 12 8004412 8124048 119637 Gain 3 0.898106 96 1259 chas 99.99 Gain 100 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400307HW male "research_filter, clinical_filter" ERUW26412 12 8004412 8124048 119637 Gain 3 0.896415 96 1259 chas 95.67 Gain 100 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" XQAG43010 12 8004412 8124048 119637 Gain 3 0.886836 96 1259 chas 95.67 Gain 62.86 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" PEOV46099 12 8004412 8124048 119637 Gain 3 0.890701 96 1259 chas 95.67 Gain 95.73 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401110GJ female "research_filter, clinical_filter" GXLR90543 12 8004412 8124048 119637 Gain 3 0.900454 96 1259 chas 100 Gain 98.92 Gain 100 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401330RR female "research_filter, clinical_filter" APCI57441 12 8004412 8124048 119637 Loss 1 0.908921 96 1259 chas 100 Loss 100 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401832MC female "research_filter, clinical_filter" PRPG47770 12 8004412 8124048 119637 Loss 1 0.914906 96 1259 chas 100 Loss 100 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401695BT female "research_filter, clinical_filter" LNDH30137 12 8004412 8124048 119637 Loss 1 0.899317 96 1259 chas 100 Loss 69.73 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401808PS male "research_filter, clinical_filter" JPSN96941 12 8004412 8124048 119637 Gain 3 0.901867 96 1259 chas 100 Gain 99.99 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" FSRW48279 12 8004412 8124048 119637 Gain 3 0.897599 96 1259 chas 97.24 Gain 100 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401385BB male "research_filter, clinical_filter" DJYF53115 12 8004412 8124048 119637 Gain 3 0.896703 96 1259 chas 97.24 Gain 98.05 Gain 98.04 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401184MM male "research_filter, clinical_filter" UECJ73760 12 8004412 8124048 119637 Gain 3 0.887417 96 1259 chas 100 Gain 100 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" DMKI43381 12 8004412 8124048 119637 Gain 3 0.893642 96 1259 chas 92.37 Gain 93.23 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" VBEF49630 12 8004412 8124048 119637 Loss 1 0.918412 96 1259 chas 100 Loss 100 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "119637(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 15 64 - 0 "119637(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" XSMN99460 1 144949962 145069415 119454 Gain 3 0.869431 184 652 chas 0 - 30.38 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 1q21.1 - PDE4DIP 1 PDE4DIP 1 - - - "119454(11|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Park(2010),Ju(2010),Kim(2009))" "2287(10|Pang(2010),Wheeler(2008),McKernan(2009),Ahn(2009),Bentley(2008))" 30 61 - 0 "119454(127|Teague(2010),Korbel(2007),Ju(2010),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401235IA male "research_filter, clinical_filter" EUQI28257 14 22747483 22866926 119444 Gain 3 0.864467 172 698 chas 0 - 0 - 0 - --- 82 0 - - ChAS 14q11.2 - - 0 - 0 - - - "119444(11|Sebat(2004),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 82 - 0 "119444(61|Sebat(2004),Wong(2007),Wang(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400920MK female clinical_filter FCXX78522 16 72428021 72547381 119361 Loss 1 0.933262 64 1894 chas 96.21 Loss 98.11 Loss 98.11 Loss LossLossLoss 59 87.27 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16q22.2 - - 0 - 0 - - - - - - 59 - 0 "119361(3|Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" NXEA90195 4 69366693 69485827 119135 Gain 3 0.89549 48 2534 chas 41.91 Gain 92.26 Gain 0 - GainGain- 67 92.89 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "119135(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "119135(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401133JG male research_filter VHVH83554 4 69366693 69485827 119135 Gain 3 0.884687 48 2534 chas 99.62 Gain 90.94 Gain 0 - GainGain- 67 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "119135(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "119135(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_no 400198MD male research_filter TJGR62389 4 69366693 69485827 119135 Gain 3 0.895668 48 2534 chas 41.91 Gain 95.44 Gain 0 - GainGain- 67 93.09 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "119135(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "119135(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400207HN male research_filter DCUN59806 4 69366693 69485827 119135 Gain 3 0.885769 48 2534 chas 0 - 95.06 Gain 0 - -Gain- 67 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "119135(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "119135(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400316SL female research_filter ZRAK81940 4 69366722 69485827 119106 Gain 3 0.888552 46 2646 chas 0 - 0 - 0 - --- 67 93.11 Gain "GTC,IP6" ChAS 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "119106(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "119106(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_yes 401864CV female - OPOQ31165 2 97739019 97858122 119104 Loss 1 0.924681 12 10827 chas 0 - 54.6 Loss 0 - -Loss- 47 95.36 Loss "BS,GTC,IP6" "ChAS,NXS" 2q11.2 - "FAHD2B,ANKRD36" 2 "FAHD2B,ANKRD36" 2 - - - "119104(21|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McCarroll(2008),Redon(2006),Ju(2010),Shaikh(2009),Mills(2006))" 791(1|Perry(2008)) 93 47 - 0 "119104(82|Ju(2010),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Wang(2007),Durbin(2010),Wilson(2010),McCarroll(2008),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400795CL female research_filter QDNW53844 5 46246500 46365514 119015 Loss 1 0.881946 26 4760 chas 0 - 100 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "119015(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "119015(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400729HC female "research_filter, clinical_filter" UXJM82913 5 46246500 46365514 119015 Loss 1 0.893226 26 4760 chas 0 - 100 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "119015(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "119015(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" QEPL68818 5 46246500 46365514 119015 Loss 1 0.888059 26 4760 chas 0 - 77.42 Loss 0 - -Loss- 27 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "119015(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 27 - 0 "119015(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 402028BD male "research_filter, clinical_filter" SBTA40047 5 46246500 46365391 118892 Loss 1 0.894725 24 5169 chas 0 - 69.07 Loss 0 - -Loss- 26 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "118892(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 26 - 0 "118892(57|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401628GC female research_filter DOIH36842 1 30246192 30365005 118814 Loss 1 0.921735 68 1773 chas 100 Loss 97.84 Loss 97.84 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 1p35.2 - - 0 - 0 - - - 1072(1|Ahn(2009)) - - 82 - 0 "118814(13|Ahn(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" RTCT86718 12 8004412 8123224 118813 Gain 3 0.901516 94 1277 chas 97.23 Gain 97.21 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 12p13.31 - "SLC2A14,SLC2A3" 2 "SLC2A14,SLC2A3" 2 - - - "118813(52|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 923(1|Mills(2006)) 16 62 - 0 "118813(155|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Gusev(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Mills(2006),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" UKBP75340 6 74302941 74421714 118774 Gain 3 0.897931 208 573 chas 72.99 Gain 100 Gain 100 Gain GainGainGain 76 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q13 - "SLC17A5,CD109" 2 "SLC17A5,CD109" 2 SLC17A5 - - "7215(4|de Smith(2007),Conrad(2009),McKernan(2009),Mills(2006))" "671(6|Levy(2007),Bentley(2008),Ahn(2009),Wheeler(2008),Mills(2006))" - 76 - 0 "118774(33|Conrad(2009),Ahn(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" DUXB26784 4 69367092 69485827 118736 Gain 3 0.904408 45 2698 chas 0 - 93.29 Gain 0 - -Gain- 67 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118736(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118736(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401519SA female research_filter LMJA76842 4 69367093 69485827 118735 Loss 1 0.939746 44 2761 chas 42.05 Loss 73.95 Loss 89.19 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" TABQ91013 4 69367093 69485827 118735 Loss 1 0.943751 44 2761 chas 42.05 Loss 77.61 Loss 49.43 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" LETQ64470 4 69367093 69485827 118735 Gain 3 0.911311 44 2761 chas 42.05 Gain 93.39 Gain 0 - GainGain- 67 91.94 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401812HG male research_filter FNMA81925 4 69367093 69485827 118735 Gain 3 0.89017 44 2761 chas 42.05 Gain 93.29 Gain 0 - GainGain- 67 95.87 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400171BJ male research_filter FSRW48279 4 69367093 69485827 118735 Gain 3 0.884587 44 2761 chas 99.66 Gain 94.38 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401385BB male research_filter TGEI86896 4 69367093 69485827 118735 Gain 3 0.895908 44 2761 chas 99.66 Gain 79.62 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401742KB male research_filter TDCE32526 4 69367093 69485827 118735 Gain 3 0.909104 44 2761 chas 99.66 Gain 93.29 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400583HS male research_filter AEUU95723 4 69367093 69485827 118735 Gain 3 0.900549 44 2761 chas 42.05 Gain 94.38 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402073LQ male research_filter ABWI37104 4 69367093 69485827 118735 Gain 3 0.902398 44 2761 chas 42.05 Gain 94.38 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401200BD male research_filter NKNM36178 4 69367093 69485827 118735 Gain 3 0.897046 44 2761 chas 99.66 Gain 94.38 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400668TD male research_filter PAFA79672 4 69367093 69485827 118735 Gain 3 0.911683 44 2761 chas 42.05 Gain 94.38 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402033WD male research_filter CORE80412 4 69367093 69485827 118735 Gain 3 0.892935 44 2761 chas 0 - 69.17 Gain 0 - -Gain- 67 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118735(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118735(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400581VJ female research_filter IWRE15730 4 69367129 69485827 118699 Loss 1 0.949248 43 2826 chas 42.06 Loss 62.15 Loss 88.73 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118699(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118699(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" IDKP47812 4 69367129 69485827 118699 Gain 3 0.89713 43 2826 chas 42.06 Gain 92.6 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118699(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 67 - 0 "118699(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401377MA male research_filter GHOG89686 9 9843375 9962066 118692 Loss 1 0.90694 163 732 chas 96.22 Loss 95.99 Loss 98.1 Loss LossLossLoss 144 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - PTPRD 1 PTPRD 1 - - - "81657(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007),Wheeler(2008),Shaikh(2009))" "885(5|Wang(2008),Wheeler(2008),Bentley(2008),Ahn(2009),Mills(2006))" - 144 - 0 "118692(43|Ahn(2009),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Simon-Sanchez(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401459HF male "research_filter, clinical_filter" GHOG89686 6 93101639 93220277 118639 Loss 1 0.905109 76 1581 chas 97.56 Loss 98.68 Loss 98.67 Loss LossLossLoss 72 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "51776(4|Itsara(2009),Wang(2007),Redon(2006),Matsuzaki(2009))" - - 72 - 0 "118639(14|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401459HF male "research_filter, clinical_filter" VDRD32700 4 69367195 69485827 118633 Gain 3 0.900132 42 2893 chas 99.74 Gain 94.47 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118633(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118633(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400271SR male research_filter NWRU68440 4 69367195 69485827 118633 Gain 3 0.893372 42 2893 chas 42.09 Gain 94.47 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118633(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118633(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401064FR male research_filter KGCF91244 4 69367195 69485827 118633 Gain 3 0.888935 42 2893 chas 0 - 69.23 Gain 0 - -Gain- 66 93.29 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118633(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118633(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 401112LG_1 female research_filter XNFN85306 14 22676929 22795424 118496 Gain 3 0.865188 234 508 chas 0 - 0 - 0 - --- 120 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "118496(12|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 120 - 0 "118496(61|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401797LS male clinical_filter XOQW96687 X 47882970 48001375 118406 Loss 1 0.910271 96 1246 chas 88.85 Loss 0 - 0 - Loss-- 84 NA NA NA "ChAS,IPN" Xp11.23 - "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 - - 5127(1|Ahn(2009)) "118406(33|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 718(1|Perry(2008)) 41 84 - 0 "118406(52|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" SRQH11774 4 69367486 69485827 118342 Loss 1 0.947326 41 2958 chas 42.19 Loss 74.91 Loss 83.93 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118342(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118342(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401410BJ male "research_filter, clinical_filter" IJCH39724 4 69367486 69485827 118342 Gain 3 0.886138 41 2958 chas 42.19 Gain 92.88 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118342(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118342(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401571SD male research_filter IGQR94047 4 69367486 69485827 118342 Gain 3 0.891493 41 2958 chas 0 - 60.06 Gain 0 - -Gain- 66 93.52 Gain IP6 "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118342(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118342(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400060MC female research_filter DBZL89045 4 69367486 69485827 118342 Gain 3 0.890436 41 2958 chas 0 - 100 Gain 0 - -Gain- 66 100 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "118342(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 55 66 - 0 "118342(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400032RC female research_filter XTPE89033 X 47879111 47997394 118284 Loss 0 0.977984 94 1271 chas 92.2 Loss 0 - 0 - Loss-- 84 92.21 Loss "BS,GTC,IP6" "ChAS,IPN" Xp11.23 - "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 - - 8986(1|Ahn(2009)) "118284(33|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 718(1|Perry(2008)) 38 84 - 0 "118284(52|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" HGCG44121 X 47879111 47997394 118284 Loss 0 0.981793 94 1271 chas 92.2 Loss 0 - 0 - Loss-- 84 92.21 Loss "BS,GTC,IP6" "ChAS,IPN" Xp11.23 - "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 - - 8986(1|Ahn(2009)) "118284(33|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 718(1|Perry(2008)) 38 84 - 0 "118284(52|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" NVDU55912 X 47879111 47997394 118284 Loss 0 0.983009 94 1271 chas 92.2 Loss 0 - 0 - Loss-- 84 NA NA NA "ChAS,IPN" Xp11.23 - "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 "SSX6,SPACA5,ZNF630,LOC100509575,SPACA5B" 5 - - 8986(1|Ahn(2009)) "118284(33|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 718(1|Perry(2008)) 38 84 - 0 "118284(52|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401307VR male "research_filter, clinical_filter" TDDJ68763 7 62659912 62778143 118232 Loss 1 0.891084 8 16890 chas 0.1 Gain 48.44 Gain 85.73 Gain GainGainGain 31 NA NA NA "ChAS,IPN,NXS,PTK" 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401250WD female research_filter BCMG96058 7 62659912 62778143 118232 Loss 1 0.876103 8 16890 chas 0 - 44.95 Gain 44.95 Gain #NAME? 31 NA NA NA "ChAS,NXS,PTK" 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400013TA male research_filter RWTQ90156 7 62659912 62778143 118232 Loss 1 0.857301 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400717BD male - YWQF89241 7 62659912 62778143 118232 Loss 1 0.865774 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400509CJ female - NKHQ61532 7 62659912 62778143 118232 Loss 1 0.878667 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400588BE female - YWSA20061 7 62659912 62778143 118232 Loss 1 0.902421 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400101EH female - AGIM53957 7 62659912 62778143 118232 Loss 1 0.869157 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400564SN female - EJLX27201 7 62659912 62778143 118232 Loss 1 0.903248 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400545EW_1 female - ZRZC68152 7 62659912 62778143 118232 Loss 1 0.891333 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400155CW male - XDYS74119 7 62659912 62778143 118232 Loss 1 0.873748 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 401019MP female - FISX28606 7 62659912 62778143 118232 Loss 1 0.8662 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400677HD male - PAIU48992 7 62659912 62778143 118232 Loss 1 0.872901 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400622SJ female - VYEA28313 7 62659912 62778143 118232 Loss 1 0.874216 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400983PV female - AIKT30285 7 62659912 62778143 118232 Loss 1 0.890317 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400618GC male - ZRXE40373 7 62659912 62778143 118232 Loss 1 0.88682 8 16890 chas 0 - 0 - 0 - --- 31 0 - - ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400730SH male - DWHI65488 7 62659912 62778143 118232 Loss 1 0.874144 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400135DR male - OGJP80646 7 62659912 62778143 118232 Loss 1 0.903278 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400704LC female - QUIW42968 7 62659912 62778143 118232 Loss 1 0.888142 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400926LJ female - UBGH15538 7 62659912 62778143 118232 Loss 1 0.873276 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401266HM female - GBQV50998 7 62659912 62778143 118232 Loss 1 0.884422 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401818PC male - BHQW11777 7 62659912 62778143 118232 Loss 1 0.868202 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401027KW male - TABQ91013 7 62659912 62778143 118232 Loss 1 0.8633 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400934LA female - BLGS11062 7 62659912 62778143 118232 Loss 1 0.884178 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401714BM female - SXXB40252 7 62659912 62778143 118232 Loss 1 0.914651 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401495NR male - PDTM24300 7 62659912 62778143 118232 Loss 1 0.909555 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401036WS female - RXRT66436 7 62659912 62778143 118232 Loss 1 0.870094 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401414CR male - IAMC34091 7 62659912 62778143 118232 Loss 1 0.876738 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 402067KS female - NINK42890 7 62659912 62778143 118232 Loss 1 0.879485 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401611CD male - XNFN85306 7 62659912 62778143 118232 Loss 1 0.890596 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401797LS male - ICZT95489 7 62659912 62778143 118232 Loss 1 0.881431 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401386WA male - KAAS48951 7 62659912 62778143 118232 Loss 1 0.882589 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401504RJ male - SAHS24305 7 62659912 62778143 118232 Loss 1 0.867349 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401968HL female - FRXS36515 7 62659912 62778143 118232 Loss 1 0.86657 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400769SL female - FUTH67903 7 62659912 62778143 118232 Loss 1 0.886348 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401874DJ male - DJYF53115 7 62659912 62778143 118232 Loss 1 0.889378 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401184MM male - VUND65965 7 62659912 62778143 118232 Loss 1 0.888246 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401498HH male - SFLX52247 7 62659912 62778143 118232 Loss 1 0.893117 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401640WJ male - VVRJ19010 7 62659912 62778143 118232 Loss 1 0.91912 8 16890 chas 0 - 0 - 0 - --- 31 NA NA NA ChAS 7q11.21 - LOC643955 1 LOC643955 1 - - 94168(1|Kidd(2008)) "118232(18|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Shaikh(2009),Redon(2006),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 465(1|Perry(2008)) 99 31 - 0 "118232(33|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401535RJ male - AYKK27829 19 20598430 20716376 117947 Loss 1 0.896556 83 1438 chas 100 Loss 100 Loss 100 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" QTRF59074 19 20598430 20716376 117947 Loss 1 0.902369 83 1438 chas 100 Loss 100 Loss 100 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" IWRE15730 19 20598430 20716376 117947 Loss 1 0.894655 83 1438 chas 99.89 Loss 100 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" WHOU87472 19 20598430 20716376 117947 Loss 1 0.887012 83 1438 chas 100 Loss 96.11 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" NQMZ66306 19 20598430 20716376 117947 Loss 1 0.879518 83 1438 chas 100 Loss 63.61 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401801LA male "research_filter, clinical_filter" LMDJ78561 19 20598430 20716376 117947 Loss 1 0.895603 83 1438 chas 100 Loss 100 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" LCVR91256 19 20598430 20716376 117947 Loss 1 0.88836 83 1438 chas 100 Loss 29.34 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401510DG male "research_filter, clinical_filter" UUMD32389 19 20598430 20716376 117947 Loss 1 0.88142 83 1438 chas 100 Loss 94.53 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400609FJ male "research_filter, clinical_filter" JPEZ22320 19 20598430 20716376 117947 Loss 1 0.902608 83 1438 chas 100 Loss 86.08 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117947(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 74 - 0 "117947(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" WMQY51169 19 20598430 20716337 117908 Loss 1 0.882878 82 1455 chas 99.89 Loss 29.1 Loss 100 Loss LossLossLoss 74 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117908(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 73 - 0 "117908(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400364SS male "research_filter, clinical_filter" UPRR75789 19 20598430 20716337 117908 Loss 1 0.881847 82 1455 chas 100 Loss 15.57 Loss 100 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117908(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 73 - 0 "117908(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400889CM female "research_filter, clinical_filter" IDTW13637 2 86644 204534 117891 Gain 3 0.898001 226 523 chas 88.75 Gain 87.6 Gain 88.75 Gain GainGainGain 79 NA NA NA "ChAS,IPN,NXS,PTK" 2p25.3 - - 0 - 0 - - - "117891(4|Conrad(2009),Pinto(2007),Shaikh(2009),Mills(2006))" "973(3|Pang(2010),Levy(2007))" 17 78 - 0 "117891(17|Teague(2010),Wong(2007),Redon(2006),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" NCJU46793 19 20598536 20716337 117802 Loss 0 0.965824 80 1491 chas 100 Loss 100 Loss 100 Loss LossLossLoss 73 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - ZNF826P 1 ZNF826P 1 - - - "117802(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 1 72 - 0 "117802(309|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" OWVL37831 11 6776133 6893903 117771 Loss 1 0.910148 208 568 chas 94.99 Loss 97.49 Loss 97.5 Loss LossLossLoss 121 NA NA NA "ChAS,IPN,NXS,PTK" 11p15.4 - "OR10A2,OR10A5,OR2AG2,OR2AG1,OR6A2" 5 "OR10A2,OR10A5,OR2AG2,OR2AG1,OR6A2" 5 - - - - "451(2|Conrad(2009),Ju(2010))" 2 121 - 0 "117771(23|Ju(2010),Wong(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 400770MA female "research_filter, clinical_filter" WZBZ52169 14 22826765 22944507 117743 Loss 1 0.857151 160 740 chas 0 - 0 - 0 - --- 91 100 Loss "BS,GTC" ChAS 14q11.2 - - 0 - 0 - - - "117743(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 91 - 0 "117743(96|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401619BT female clinical_filter TBVD73320 11 50477704 50595389 117686 Loss 1 0.899719 23 5349 chas 0 - 88.22 Loss 99.99 Loss #NAME? 12 NA NA NA "ChAS,NXS,PTK" 11p11.12 - - 0 - 0 - - - "117686(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 12 - 0 "117686(27|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400712GC female research_filter NNNK99860 11 50477716 50595389 117674 Loss 1 0.916474 21 5883 chas 0 - 88.23 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "117674(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 12 - 0 "117674(27|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400439IM female research_filter CUZZ77277 5 99324810 99442355 117546 Loss 1 0.90283 60 1992 chas 96.03 Loss 100 Loss 100 Loss LossLossLoss 69 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.1 - - 0 - 0 - - - "117546(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Pinto(2007),Park(2010),Kim(2009),Shaikh(2009))" - 48 69 - 0 "117546(37|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Sharp(2005),Durbin(2010),Pinto(2011),Pinto(2007),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" YWSA20061 4 107282656 107400175 117520 Gain 3 0.911336 84 1415 chas 77.76 Gain 92.97 Gain 92.97 Gain GainGainGain 73 98.99 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q24 - LOC100507096 1 LOC100507096 1 - - - 117520(1|Zogopoulos(2007)) - - 73 - 0 "70828(2|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" KIAD94479 12 74306941 74424389 117449 Loss 1 0.93445 68 1752 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 51 97.39 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.1 - - 0 - 0 - - - - - - 51 - 0 "98320(8|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" AWAR79338 12 74306941 74424389 117449 Loss 1 0.919584 68 1752 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 51 99.6 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.1 - - 0 - 0 - - - - - - 51 - 0 "98320(8|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" FGSE34256 6 104442647 104560083 117437 Loss 1 0.928099 72 1654 chas 97.9 Loss 98.95 Loss 100 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.3 - - 0 - 0 - - - "25647(2|de Smith(2007),Shaikh(2009))" "890(2|Ahn(2009),McKernan(2009))" - 65 - 0 "117437(9|Ahn(2009),Wong(2007),McKernan(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" IDKP47812 3 57287783 57405068 117286 Gain 3 0.909886 116 1019 chas 95.64 Gain 96.62 Gain 99.58 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.3 - "APPL1,ASB14,DNAH12" 3 "APPL1,ASB14,DNAH12" 3 - - - - - - 62 - 0 "110505(9|Kidd(2008),Levy(2007),Durbin(2010),Teague(2010))" TRUE TRUE ipn_yes algo_yes NA 401377MA male "research_filter, clinical_filter" TLUK35377 5 44115827 44233102 117276 Loss 1 0.91872 58 2057 chas 93.34 Loss 96.22 Loss 96.22 Loss LossLossLoss 49 97.8 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p12 - - 0 - 0 - - - - - - 49 - 0 "35475(14|Wong(2007),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" TAVH54072 12 37987892 38105138 117247 Loss 1 0.884312 16 7816 chas 0 - 0 - 0 - --- 28 NA NA NA ChAS 12q11 - - 0 - 0 - - - "117247(23|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Ju(2010),Conrad(2009),Altshuler(2010),McKernan(2009),Ahn(2009),Pinto(2007),Cooper(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 93(1|Ahn(2009)) 2 28 - 0 "117247(87|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Altshuler(2010),Conrad(2006),Durbin(2010),Simon-Sanchez(2007),Pinto(2007),Cooper(2008),Perry(2008b),Redon(2006),McKernan(2009),Ju(2010),Korbel(2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400948EV female - FPHR45460 10 18106430 18223634 117205 Loss 1 0.868165 24 5095 chas 0 - 0 - 0 - --- 11 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 401104DM female - ORXH15927 10 18106430 18223634 117205 Loss 1 0.87654 24 5095 chas 0 - 0 - 0 - --- 11 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 400266BA female - ROCO41006 10 18106430 18223634 117205 Loss 1 0.882851 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 400336BG male - KAAS48951 10 18106430 18223634 117205 Loss 1 0.87697 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401504RJ male - LELT20618 10 18106430 18223634 117205 Loss 1 0.882497 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 400211BJ female - UJRA83281 10 18106430 18223634 117205 Loss 1 0.86582 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401361GG male - SSWV37655 10 18106430 18223634 117205 Loss 1 0.86987 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401706BJ female - APOV19283 10 18106430 18223634 117205 Loss 1 0.894563 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 400203NA male - BSJX70163 10 18106430 18223634 117205 Loss 1 0.882885 24 5095 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "117205(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401406KF male - PTGD86385 X 115939240 116056435 117196 Gain 2 0.897899 59 2020 chas 89.09 Gain 0 - 0 - Gain-- 75 NA NA NA "ChAS,IPN" Xq23 - - 0 - 0 - - - "108875(5|Conrad(2009),Redon(2006),Shaikh(2009),Perry(2008))" "1095(2|McKernan(2009),Perry(2008))" 1 75 - 0 "117196(12|Conrad(2009),Redon(2006),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" FNSQ39400 2 82202334 82319437 117104 Gain 4 0.949875 84 1410 chas 95.72 Gain 97.64 Gain 97.64 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - "106099(4|Itsara(2009),Wheeler(2008),Pinto(2007),Shaikh(2009))" - - 71 - 0 "106099(8|Itsara(2009),Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" DEXW71048 2 82202334 82319437 117104 Gain 3 0.906498 84 1410 chas 95.72 Gain 97.64 Gain 97.64 Gain GainGainGain 71 NA NA NA "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - "106099(4|Itsara(2009),Wheeler(2008),Pinto(2007),Shaikh(2009))" - - 71 - 0 "106099(8|Itsara(2009),Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400833BB male "research_filter, clinical_filter" ZRRL85494 4 69367093 69484096 117004 Loss 1 0.945681 42 2853 chas 99.96 Loss 94.3 Loss 86.57 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "117004(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 56 66 - 0 "117004(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" LWHQ31793 4 69367093 69484096 117004 Loss 1 0.946438 42 2853 chas 99.96 Loss 40.34 Loss 89.27 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "117004(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 56 66 - 0 "117004(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" XQAG43010 4 69367093 69484096 117004 Loss 1 0.949078 42 2853 chas 41.19 Loss 94.3 Loss 49.41 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "117004(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 56 66 - 0 "117004(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" OFVS61400 10 18106430 18223417 116988 Loss 1 0.885997 23 5317 chas 0 - 0 - 0 - --- 11 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 98 11 - 0 "116988(13|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 401143LK female - RIQO94770 4 69367195 69484096 116902 Loss 1 0.943349 40 2997 chas 41.23 Loss 40.38 Loss 49.46 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "116902(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 56 65 - 0 "116902(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 402062KR female "research_filter, clinical_filter" VPWL90389 13 90984316 91101209 116894 Loss 1 0.914335 94 1256 chas 99.64 Loss 99.82 Loss 99.82 Loss LossLossLoss 72 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.3 - - 0 - 0 - - - 3321(1|Conrad(2009)) - - 72 - 0 "40561(31|Pinto(2011),Conrad(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" QGBC35391 X 140666285 140783042 116758 Gain 3 0.891999 112 1051 chas 84.85 Gain 0 - 0 - Gain-- 76 NA NA NA "ChAS,IPN" Xq27.2 - "SPANXA2-OT1,SPANXA1,SPANXA2" 3 "SPANXA2-OT1,SPANXA1,SPANXA2" 3 - - 57210(2|Kidd(2008)) "110299(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 36 75 - 0 "116758(20|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402051AF female "research_filter, clinical_filter" JYCC50302 11 50472473 50589217 116745 Loss 1 0.932463 22 5559 chas 82.35 Loss 88.93 Loss 91 Loss LossLossLoss 16 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - - 0 - 0 - - - "116745(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 15 - 0 "116745(27|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401778CB male research_filter TAVH54072 X 101480784 101597501 116718 Loss 1 0.872177 17 7294 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116718(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400948EV female - QYVK49015 Y 24876523 24993236 116714 Loss 0 0.854871 68 1742 chas 100 Loss 0 - 0 - Loss-- 25 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "116714#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 25 - 0 "116714(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" OUKT23649 12 82011547 82128250 116704 Loss 1 0.922166 112 1051 chas 91.91 Loss 95.95 Loss 95.95 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 12q21.31 - PPFIA2 1 PPFIA2 1 - - - "10128(4|Park(2010),Kidd(2008),McKernan(2009))" - - 65 - 0 "36946(31|Pinto(2011),Kidd(2008),McKernan(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400450FG male "research_filter, clinical_filter" TFVC48426 17 6749336 6865997 116662 Loss 1 0.89997 52 2287 chas 75.3 Loss 98.87 "Gain,Loss" 87.65 Loss "LossGain,LossLoss" 33 77.57 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p13.1 - ALOX12P2 1 ALOX12P2 1 - - - "19257(3|Pang(2010),Kidd(2008),McKernan(2009))" "2027(3|Pang(2010),Conrad(2009))" - 33 - 0 "116662(28|Conrad(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400501SJ male "research_filter, clinical_filter" IZZO20602 17 6749336 6865997 116662 Loss 1 0.895186 52 2287 chas 77.57 Loss 98.87 "Gain,Loss" 88.78 Loss "LossGain,LossLoss" 33 NA NA NA "ChAS,IPN,NXS,PTK" 17p13.1 - ALOX12P2 1 ALOX12P2 1 - - - "19257(3|Pang(2010),Kidd(2008),McKernan(2009))" "2027(3|Pang(2010),Conrad(2009))" - 33 - 0 "116662(28|Conrad(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" APCI57441 9 12031984 12148632 116649 Loss 1 0.919199 84 1405 chas 100 Loss 100 Loss 100 Loss LossLossLoss 91 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "116649(20|Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 91 - 0 "116649(37|Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Perry(2008b),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401832MC female "research_filter, clinical_filter" TKWO78971 4 69367486 69484096 116611 Loss 1 0.944021 39 3068 chas 41.33 Loss 40.48 Loss 89.57 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B17 1 UGT2B17 1 - - - "116611(33|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 797(3|Conrad(2005)) 56 65 - 0 "116611(388|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),Teague(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401368WR male "research_filter, clinical_filter" KWJN47187 X 101480784 101597295 116512 Loss 1 0.876088 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400821FE female - OTAJ32230 X 101480784 101597295 116512 Loss 1 0.879274 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400785AK female - YMBI36841 X 101480784 101597295 116512 Loss 1 0.884062 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401321CE female - BTBU94149 X 101480784 101597295 116512 Loss 1 0.879483 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401177SL female - AZMC27188 X 101480784 101597295 116512 Loss 1 0.884467 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400209BS_1 female - UCHK30425 X 101480784 101597295 116512 Loss 1 0.87949 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400385LJ female - MGYM61346 X 101480784 101597295 116512 Loss 1 0.876131 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400974PS female - UBHC61833 X 101480784 101597295 116512 Loss 1 0.885785 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400768MN female - QRLG88085 X 101480784 101597295 116512 Loss 1 0.8689 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400759FV female - IGQR94047 X 101480784 101597295 116512 Loss 1 0.876372 16 7767 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400060MC female - JHGL98054 X 101480784 101597295 116512 Loss 1 0.883924 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400368SD female - ZRRL85494 X 101480784 101597295 116512 Loss 1 0.865131 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400043HC female - OUAW94182 X 101480784 101597295 116512 Loss 1 0.857952 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 402063WM female - CVYW15790 X 101480784 101597295 116512 Loss 1 0.875387 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401552BK female - RIAA15120 X 101480784 101597295 116512 Loss 1 0.886263 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401315HK female - VBTG63612 X 101480784 101597295 116512 Loss 1 0.867667 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401550SP female - GXLR90543 X 101480784 101597295 116512 Loss 1 0.871116 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401330RR female - SMGW17663 X 101480784 101597295 116512 Loss 1 0.870747 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400362TV female - CHNV74218 X 101480784 101597295 116512 Loss 1 0.884517 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400837HN female - NOIN63241 X 101480784 101597295 116512 Loss 1 0.883134 16 7767 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 98 7 - 0 116512(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400641WJ female - CBEA57280 3 1601470 1717877 116408 Gain 3 0.894795 120 978 chas 100 Gain 99.14 Gain 100 Gain GainGainGain 134 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.3 - - 0 - 0 - - - "74588(9|Conrad(2009),Ju(2010),Altshuler(2010),Pinto(2007),Park(2010),Simon-Sanchez(2007),McCarroll(2008))" "351(3|Pang(2010),Levy(2007),Bentley(2008))" - 134 - 0 "116408(42|Teague(2010),Wong(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Shaikh(2009),Campbell(2011),Park(2010),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" PQCI84759 5 177143920 177260317 116398 Gain 3 0.903935 24 5060 chas 0 - 0 - 0 - --- 12 0 - - ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "116398#1%""Sotos syndrome"":2326144" - "116210(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 12 - 0 "116398(41|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400076LC female - VRGJ17464 22 23004887 23121204 116318 Loss 1 0.927881 12 10574 chas 21.52 Loss 50.77 Loss 53.12 Loss LossLossLoss 74 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.22 - - 0 - 0 - "116318#1%""22q11.2 distal deletion syndrome"":1580382" - "116318(61|Sebat(2004),Ahn(2009),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Levy(2007),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Park(2010),McCarroll(2005),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 291(2|Matsuzaki(2009)) 81 74 - 0 "116318(395|Sebat(2004),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Simon-Sanchez(2007),Wang(2007),Ahn(2009),Cooper(2008),Campbell(2011),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401914PR male research_filter DQOA73385 14 106044263 106160500 116238 Loss 1 0.886398 20 6117 chas 0 - 52.65 Loss 0 - -Loss- 20 NA NA NA "ChAS,NXS" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "116238(48|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2972(13|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 20 - 0 "116238(239|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401592NR male research_filter KKJQ91569 14 22676929 22793144 116216 Loss 1 0.850942 226 516 chas 0 - 8.37 Loss 100 Loss #NAME? 116 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "116216(10|Sebat(2004),Perry(2008),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 116 - 0 "116216(58|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400258BC female "research_filter, clinical_filter" MKJI51363 3 4114722 4230860 116139 Loss 1 0.934476 73 1613 chas 94.46 Loss 97.24 Loss 97.23 Loss LossLossLoss 89 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "116139(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Levy(2007)) - 89 - 0 "116139(38|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" FNEG58263 Y 24877200 24993236 116037 Loss 0 0.869164 64 1841 chas 100 Loss 0 - 0 - Loss-- 24 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "116037#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "73495(6|Matsuzaki(2009),Perry(2008))" - 100 24 - 0 "116037(2|Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400836LK male "research_filter, clinical_filter" KSUK43841 3 4114722 4230733 116012 Loss 1 0.916747 72 1633 chas 94.45 Loss 94.42 Loss 97.23 Loss LossLossLoss 89 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "116012(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Levy(2007)) - 89 - 0 "116012(38|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401762SD male "research_filter, clinical_filter" UJRA83281 13 64289304 64405309 116006 Loss 1 0.900244 76 1546 chas 81.78 Loss 52.37 Loss 91.28 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 41710(1|Kidd(2008)) "116006(9|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 80 65 - 0 "116006(14|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" UCHK30425 3 100326510 100442497 115988 Gain 3 0.894859 112 1044 chas 88.31 Gain 95.71 Gain 100 Gain GainGainGain 62 75.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "115988(12|Jakobsson(2008),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 3 61 - 0 "115988(30|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400385LJ female "research_filter, clinical_filter" IFUE20361 14 22844970 22960819 115850 Loss 1 0.855835 151 772 chas 0 - 12.42 Loss 0 - -Loss- 99 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 2046(1|Ahn(2009)) "115850(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 99 - 0 "115850(99|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401834CB female "research_filter, clinical_filter" KSNB36135 4 69435889 69551731 115843 Gain 3 0.883564 60 1963 chas 0 - 46.21 Gain 46.21 Gain #NAME? 44 NA NA NA "ChAS,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "115843(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 43 44 - 0 "115843(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401677MM female "research_filter, clinical_filter" VYEA28313 8 39247098 39362916 115819 Gain 3 0.908604 64 1838 chas 100 Gain 100 Gain 100 Gain GainGainGain 46 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "115819(30|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1085(2|Park(2010)) 3 46 - 0 "115819(245|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400983PV female "research_filter, clinical_filter" VKGU19422 8 39247098 39362916 115819 Gain 3 0.909153 64 1838 chas 100 Gain 100 Gain 100 Gain GainGainGain 46 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "115819(30|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1085(2|Park(2010)) 3 46 - 0 "115819(245|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400778SR female "research_filter, clinical_filter" XMEG92101 3 100326510 100442328 115819 Gain 3 0.906632 108 1082 chas 81.92 Gain 95.7 Gain 95.7 Gain GainGainGain 59 88.3 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "115819(12|Jakobsson(2008),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 3 59 - 0 "115819(30|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" FVSF76751 3 100326510 100442328 115819 Gain 3 0.901835 108 1082 chas 88.29 Gain 95.7 Gain 95.7 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "115819(12|Jakobsson(2008),Itsara(2009),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 3 59 - 0 "115819(30|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401869BG male "research_filter, clinical_filter" DDLZ80520 8 39247098 39362883 115786 Gain 4 0.92901 63 1867 chas 100 Gain 99.01 Gain 100 Gain GainGainGain 46 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "115786(30|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1085(2|Park(2010)) 3 46 - 0 "115786(245|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401892MJ female "research_filter, clinical_filter" EEVS84165 18 1725758 1841469 115712 Loss 1 0.91205 92 1271 chas 100 Loss 98.24 Loss 100 Loss LossLossLoss 94 97.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401039PA male "research_filter, clinical_filter" DOLM19463 18 1725758 1841469 115712 Loss 1 0.913796 92 1271 chas 100 Loss 100 Loss 100 Loss LossLossLoss 94 97.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401607LL male "research_filter, clinical_filter" ZRXE40373 18 1725758 1841469 115712 Loss 1 0.916233 92 1271 chas 97.16 Loss 98.58 Loss 98.58 Loss LossLossLoss 94 97.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" IELV11932 18 1725758 1841469 115712 Loss 1 0.921419 92 1271 chas 97.16 Loss 98.58 Loss 98.58 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400869BK female "research_filter, clinical_filter" KSNB36135 18 1725758 1841469 115712 Loss 1 0.9176 92 1271 chas 96.43 Loss 97.87 Loss 98.58 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401677MM female "research_filter, clinical_filter" HAAE15834 18 1725758 1841469 115712 Loss 1 0.921813 92 1271 chas 97.16 Loss 97.13 Loss 97.13 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" UXJM82913 18 1725758 1841469 115712 Loss 1 0.916579 92 1271 chas 97.16 Loss 96.42 Loss 97.13 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "115712(10|Jakobsson(2008),Itsara(2009),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 94 - 0 "115712(17|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" TLUK35377 13 99790165 99905545 115381 Gain 3 0.914279 102 1142 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 62 99.06 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q32.3 - "MIR548AN,UBAC2,UBAC2-AS1" 3 "MIR548AN,UBAC2,UBAC2-AS1" 3 - - - - - - 62 - 0 "52828(4|Itsara(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" LELT20618 11 4123119 4238406 115288 Gain 3 0.896465 136 853 chas 100 Gain 100 Gain 100 Gain GainGainGain 107 NA NA NA "ChAS,IPN,NXS,PTK" 11p15.4 - RRM1 1 RRM1 1 - - - "75933(9|Wang(2007),Jakobsson(2008),Perry(2008),Matsuzaki(2009),Pinto(2007),Park(2010),Redon(2006))" - 4 107 - 0 "115288(19|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Perry(2008b),Locke(2006),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400211BJ female "research_filter, clinical_filter" WQLF68770 1 102309249 102424522 115274 Gain 3 0.91162 180 643 chas 80.04 Gain 99.99 Gain 99.99 Gain GainGainGain 122 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - "OLFM3,DNAJA1P5" 2 DNAJA1P5 1 - - - "63333(6|McCarroll(2008),Redon(2006),Matsuzaki(2009),Shaikh(2009))" 1792(2|Matsuzaki(2009)) 2 122 - 0 "115274(6|Pinto(2011),McCarroll(2008),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401437MJ male "research_filter, clinical_filter" TDHB82208 7 54304156 54419326 115171 Gain 3 0.902855 84 1387 chas 99.99 Gain 99.66 Gain 0 - GainGain- 100 NA NA NA "ChAS,IPN,NXS" 7p11.2 - - 0 - 0 - - "88104(4|Kidd(2008),Tuzun(2005))" "108453(5|Itsara(2009),Conrad(2009),Pang(2010),Matsuzaki(2009),Park(2010))" "845(2|Wang(2008),Matsuzaki(2009))" - 100 - 0 "115171(26|Teague(2010),Wong(2007),Wang(2008),Conrad(2009),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400923OA female "research_filter, clinical_filter" NVMX58254 6 95417348 95532493 115146 Loss 1 0.912544 80 1457 chas 99.84 Loss 99.93 Loss 100 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "115146(7|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 82 - 0 "115146(13|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402060PD female "research_filter, clinical_filter" TAVH54072 12 34615719 34730588 114870 Loss 1 0.883548 24 4994 chas 0 - 22.72 Loss 0 - -Loss- 25 NA NA NA "ChAS,NXS" 12p11.1 - - 0 - 0 - - - "114870(16|Wang(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Pinto(2007),Redon(2006),Ju(2010),Shaikh(2009),McCarroll(2008))" - - 25 - 0 "114870(30|Wang(2007),Jakobsson(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400948EV female research_filter ZRRL85494 13 57704050 57818893 114844 Loss 1 0.895475 84 1383 chas 92.38 Loss 100 Loss 96.19 Loss LossLossLoss 69 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.1 - "PRR20A,PRR20B,PRR20C,PRR20D,PRR20E" 5 "PRR20A,PRR20B,PRR20C,PRR20D,PRR20E" 5 - - - "114844(72|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Bentley(2008),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),McCarroll(2005),Wang(2007),Ahn(2009),McKernan(2009),Cooper(2008),Wheeler(2008),Conrad(2005),Perry(2008),Levy(2007),Altshuler(2010),Park(2010))" "2476(6|Park(2010),Matsuzaki(2009))" 26 69 - 0 "114844(185|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" JQLR11985 7 133741837 133856665 114829 Loss 1 0.927367 84 1383 chas 95.54 Loss 95.31 Loss 98.28 Loss LossLossLoss 111 NA NA NA "ChAS,IPN,NXS,PTK" 7q33 - "LRGUK,EXOC4" 2 "LRGUK,EXOC4" 2 - - - "42123(17|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 111 - 0 "112612(148|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Campbell(2011),Perry(2008),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400800MW female "research_filter, clinical_filter" UYUQ10460 19 55228948 55343730 114783 Gain 3 0.882619 44 2669 chas 11.41 Gain 22.17 Gain 0 - GainGain- 49 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 KIR3DL1 - - "114783(49|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 49 - 0 "114783(138|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes NA 400971MK female research_filter TRSR14168 8 39247098 39361676 114579 Gain 3 0.918756 60 1942 chas 100 Gain 100 Gain 100 Gain GainGainGain 45 100 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 8p11.22 - "ADAM5P,ADAM3A" 2 "ADAM5P,ADAM3A" 2 - - - "114579(30|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 541(1|Park(2010)) 3 45 - 0 "114579(244|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401908YM male "research_filter, clinical_filter" UYPJ72832 20 5934846 6049148 114303 Gain 3 0.903728 120 960 chas 99.63 Gain 100 Gain 100 Gain GainGainGain 78 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.3 - "CRLS1,LRRN4,MCM8" 3 "CRLS1,LRRN4,MCM8" 3 - - - "3862(4|Park(2010),Conrad(2009),Ahn(2009),McKernan(2009))" "1759(5|Levy(2007),Bentley(2008),Ahn(2009),Matsuzaki(2009),Mills(2006))" - 78 - 0 "14397(47|Conrad(2009),Ahn(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Park(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401240ML female "research_filter, clinical_filter" FPLE23103 X 52809185 52923471 114287 Gain 2 0.906245 126 914 chas 89.51 Gain 0 - 0 - Gain-- 39 NA NA NA "ChAS,IPN" Xp11.22 - "SPANXN5,XAGE5,XAGE3" 3 "SPANXN5,XAGE5,XAGE3" 3 - - 41762(1|Kidd(2008)) "54714(5|Conrad(2009),Korbel(2007),Matsuzaki(2009))" - 90 39 - 0 "81163(19|Conrad(2009),Korbel(2007),Kidd(2008),Levy(2007),Durbin(2010),Kidd(2010b))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" UYAI76550 5 17512016 17626196 114181 Loss 1 0.893386 16 7612 chas 20.16 Loss 0 - 0 - Loss-- 19 0 - - "ChAS,IPN" 5p15.1 50001(1|clone) - 0 - 0 - - - "114181(29|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),McCarroll(2008))" - 55 19 - 0 "114181(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Pinto(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400792RE female research_filter MECH38806 5 17512016 17626196 114181 Loss 1 0.891577 16 7612 chas 4.19 Loss 0 - 0 - Loss-- 19 NA NA NA "ChAS,IPN" 5p15.1 50001(1|clone) - 0 - 0 - - - "114181(29|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),McCarroll(2008))" - 55 19 - 0 "114181(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Pinto(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400671PP male research_filter PXVB29564 5 17512016 17626196 114181 Loss 1 0.897104 16 7612 chas 20.16 Loss 59.41 Loss 0 - LossLoss- 19 NA NA NA "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "114181(29|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),McCarroll(2008))" - 55 19 - 0 "114181(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Pinto(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400818BL female research_filter DMPI37172 12 19467159 19581291 114133 Gain 3 0.906126 92 1254 chas 88.3 Gain 92.78 Gain 99.4 Gain GainGainGain 53 NA NA NA "ChAS,IPN,NXS,PTK" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "114133(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 53 - 0 "114133(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400287BP male "research_filter, clinical_filter" VHVH83554 14 22681200 22795091 113892 Loss 1 0.845574 208 550 chas 0 - 0 - 42.23 Loss #NAME? 111 100 Loss IP6 "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "113892(12|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 111 - 0 "113892(61|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" ZSEZ81141 10 18037328 18150996 113669 Gain 3 0.86763 28 4209 chas 0 - 0 - 0 - --- 10 0 - - ChAS 10p12.33 - "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 100 10 - 0 "113669(12|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 400240HJ female - EGYT92211 10 18037328 18150996 113669 Gain 3 0.874986 28 4209 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 10p12.33 - "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 100 10 - 0 "113669(12|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401402EN male - IAET85141 10 18037368 18150996 113629 Gain 3 0.882434 27 4370 chas 62.92 Gain 0 - 0 - Gain-- 10 0 - - "ChAS,IPN" 10p12.33 - "MRC1,TMEM236,MIR511-1,MIR511-2" 4 "MRC1,TMEM236,MIR511-1,MIR511-2" 4 - - - "10358(3|Conrad(2009),Matsuzaki(2009))" - 100 10 - 0 "113629(12|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 401136LB male research_filter TDHB82208 17 36283807 36397323 113517 Loss 1 0.864286 26 4540 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "113517(16|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "113517(148|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400923OA female clinical_filter KAYE11117 17 36283807 36397323 113517 Loss 1 0.866024 26 4540 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - 13247(1|Kidd(2008)) "113517(16|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "113517(148|Ju(2010),Wong(2007),Redon(2006),Conrad(2009),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400686BM male clinical_filter REUG17486 7 38291572 38405084 113513 Gain 3 0.895945 111 1031 chas 0 - 49.96 Gain 99.03 Gain #NAME? 131 NA NA NA "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "113513(35|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 36 131 - 0 "113513(111|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401576WC female "research_filter, clinical_filter" CMHA46888 20 14781684 14895154 113471 Loss 1 0.927555 98 1169 chas 100 Loss 100 Loss 100 Loss LossLossLoss 140 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - "MACROD2-AS1,MACROD2" 2 MACROD2-AS1 1 - - - "113471(34|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1(1|Levy(2007)) - 140 - 0 "113471(113|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" ISVP82924 8 43604453 43717800 113348 Loss 1 0.906898 29 4048 chas 63.01 Loss 34.17 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 8p11.1 - - 0 - 0 - - - "113348(14|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 21 - 0 "113348(25|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401400NP male "research_filter, clinical_filter" DQHB62647 8 43604453 43717800 113348 Loss 1 0.920689 29 4048 chas 84.61 Loss 79.56 Loss 99.95 Loss LossLossLoss 21 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.1 - - 0 - 0 - - - "113348(14|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 21 - 0 "113348(25|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401732HW male "research_filter, clinical_filter" TCSA61368 X 72022843 72136113 113271 Gain 2 0.872461 10 12585 chas 0 - 0 - 0 - --- 6 0 - - ChAS Xq13.2 - "DMRTC1B,DMRTC1" 2 "DMRTC1B,DMRTC1" 2 - - 113271(2|Kidd(2008)) "9730(3|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "113271(6|Kidd(2008),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 400360SM male - XSKZ13040 X 72022843 72136113 113271 Gain 4 0.916492 10 12585 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq13.2 - "DMRTC1B,DMRTC1" 2 "DMRTC1B,DMRTC1" 2 - - 113271(2|Kidd(2008)) "9730(3|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "113271(6|Kidd(2008),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401824MM female - PTGD86385 X 72022843 72136113 113271 Gain 2 0.841906 10 12585 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq13.2 - "DMRTC1B,DMRTC1" 2 "DMRTC1B,DMRTC1" 2 - - 113271(2|Kidd(2008)) "9730(3|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "113271(6|Kidd(2008),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401262RR male - APOV19283 X 72022843 72136113 113271 Gain 2 0.885574 10 12585 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq13.2 - "DMRTC1B,DMRTC1" 2 "DMRTC1B,DMRTC1" 2 - - 113271(2|Kidd(2008)) "9730(3|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "113271(6|Kidd(2008),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 400203NA male - JYCC50302 8 43604362 43717568 113207 Loss 1 0.93501 28 4192 chas 84.52 Loss 92.21 Loss 87.4 Loss LossLossLoss 21 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.1 - - 0 - 0 - - - "113207(14|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 21 - 0 "113207(25|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401778CB male "research_filter, clinical_filter" QKSF16477 8 43604362 43717568 113207 Loss 1 0.920776 28 4192 chas 84.52 Loss 83.01 Loss 100 Loss LossLossLoss 21 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.1 - - 0 - 0 - - - "113207(14|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 21 - 0 "113207(25|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" NNNK99860 8 43604362 43717568 113207 Loss 1 0.926401 28 4192 chas 0 - 87.4 Loss 99.95 Loss #NAME? 21 NA NA NA "ChAS,NXS,PTK" 8p11.1 - - 0 - 0 - - - "113207(14|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 21 - 0 "113207(25|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400439IM female "research_filter, clinical_filter" UUMD32389 4 75008671 75121643 112973 Loss 1 0.89009 134 849 chas 93.33 Loss 66.57 Loss 85.15 Loss LossLossLoss 110 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.3 - MTHFD2L 1 MTHFD2L 1 - - - "9975(5|Pang(2010),Conrad(2009),McCarroll(2008),Altshuler(2010),Matsuzaki(2009))" 432(1|Conrad(2005)) - 109 - 0 "112973(16|Conrad(2009),Teague(2010),Conrad(2006),Durbin(2010),Pang(2010),Altshuler(2010),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400609FJ male "research_filter, clinical_filter" XDYS74119 5 17513397 17626196 112800 Loss 1 0.893728 15 8057 chas 20.41 Loss 60.14 Loss 0 - LossLoss- 18 21.85 Loss BS "ChAS,IPN,NXS" 5p15.1 50001(1|clone) - 0 - 0 - - - "112800(28|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),McCarroll(2008))" - 55 18 - 0 "112800(93|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Locke(2006),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Pinto(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401019MP female research_filter WWCZ24238 5 113577 226316 112740 Loss 1 0.922446 204 555 chas 99.67 Loss 74.44 Loss 99.76 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "CCDC127,PLEKHG4B,SDHA,LRRC14B" 4 "CCDC127,PLEKHG4B,SDHA,LRRC14B" 4 SDHA "112740#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "112740(18|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),McKernan(2009),Pang(2010),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" "2279(9|Pang(2010),Levy(2007),Mills(2006))" 13 67 - 0 "112740(63|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Park(2010),Jakobsson(2008),Teague(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401736BF male "research_filter, clinical_filter" RWTQ90156 15 46845278 46957847 112570 Loss 1 0.930683 157 721 chas 95.62 Loss 97.8 Loss 97.8 Loss LossLossLoss 102 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q21.1 - - 0 - 0 - - - - "913(11|Ju(2010),Ahn(2009),Matsuzaki(2009),Wang(2008),Pang(2010),Park(2010),Wheeler(2008),Kim(2009))" - 102 - 0 "101880(20|Ju(2010),Ahn(2009),Wang(2008),Durbin(2010),Pang(2010),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" TUPR75049 2 35891588 36004041 112454 Loss 1 0.921468 72 1583 chas 100 Loss 100 Loss 100 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "112454(27|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Shaikh(2009))" - - 83 - 0 "112454(110|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401314MK female "research_filter, clinical_filter" OLST13930 X 101480784 101593193 112410 Loss 1 0.891587 15 8029 chas 0 - 0 - 0 - --- 6 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 5 - 0 112410(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400007RG female - ATJL19217 X 101480784 101593193 112410 Loss 1 0.884699 15 8029 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 5 - 0 112410(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401608GE female - DLWB63913 X 101480784 101593193 112410 Loss 1 0.880525 15 8029 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 5 - 0 112410(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401606CG female - LLRB50237 X 101480784 101593193 112410 Loss 1 0.894981 15 8029 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 5 - 0 112410(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401594MP female - TNZB91328 X 101480784 101593193 112410 Loss 1 0.899554 15 8029 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 5 - 0 112410(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400911GA female - PXVB29564 X 120009892 120122287 112396 Gain 3 0.877727 52 2203 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "112396(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "112396(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400818BL female clinical_filter CSHY74530 X 120009900 120122287 112388 Gain 3 0.885362 44 2613 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "112388(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "112388(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400148MS female - XDYS74119 2 82202334 82314620 112287 Gain 3 0.897736 82 1386 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 69 95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - "106099(4|Itsara(2009),Wheeler(2008),Pinto(2007),Shaikh(2009))" - - 69 - 0 "106099(8|Itsara(2009),Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401019MP female "research_filter, clinical_filter" UUAC53094 2 82202334 82314620 112287 Gain 3 0.894151 82 1386 chas 96.46 Gain 98.91 Gain 0 - GainGain- 69 99.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p12 - - 0 - 0 - - - "106099(4|Itsara(2009),Wheeler(2008),Pinto(2007),Shaikh(2009))" - - 69 - 0 "106099(8|Itsara(2009),Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400849SH male "research_filter, clinical_filter" PZCO50940 X 75475618 75587764 112147 Gain 2 0.947249 44 2608 chas 95.99 Gain 0 - 0 - Gain-- 52 97.55 Gain "BS,GTC,IP6" "ChAS,IPN" Xq13.3 - - 0 - 0 - - - - - - 51 - 0 2475(1|Durbin(2010)) FALSE TRUE ipn_yes algo_yes affy6_yes 400204SC male research_filter RIAA15120 19 20608561 20720705 112145 Loss 1 0.885113 76 1495 chas 96.15 Loss 21.84 Loss 96.13 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - - 0 - 0 - - - "112145(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 2 70 - 0 "112145(304|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" XWKR95070 15 24363483 24475279 111797 Loss 1 0.878844 89 1270 chas 93.03 Loss 65.11 Loss 93.04 Loss LossLossLoss 71 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "111797#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "111797(43|Wang(2007),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 98 71 - 0 "111797(77|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" AVJL63299 4 131519909 131631415 111507 Loss 1 0.924524 72 1570 chas 93.73 Loss 96.85 Loss 96.85 Loss LossLossLoss 72 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "111507(3|Wang(2007),McKernan(2009),Simon-Sanchez(2007))" "1236(3|Wang(2008),Park(2010),Bentley(2008))" - 72 - 0 "111507(21|Wang(2007),Wang(2008),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Pinto(2011),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" VKJV88264 13 114459354 114570844 111491 Gain 3 0.914299 80 1411 chas 100 Gain 100 Gain 0 - GainGain- 33 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 13q34 - "FLJ41484,GAS6,LOC100506394,FAM70B" 4 "FLJ41484,GAS6,LOC100506394,FAM70B" 4 - - - "111491(12|Park(2010),Conrad(2009),McKernan(2009),Matsuzaki(2009),Ju(2010))" "3869(12|Ju(2010),Matsuzaki(2009),Levy(2007),McKernan(2009),Bentley(2008),Park(2010),Mills(2006))" - 32 - 0 "111491(96|Conrad(2009),Wong(2007),Ju(2010),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Park(2010),Teague(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" XROV61149 19 55252034 55363174 111141 Loss 1 0.891196 36 3175 chas 0 - 79.04 Loss 86.64 Loss #NAME? 42 NA NA NA "ChAS,NXS,PTK" 19q13.42 - "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 "KIR2DS4,KIR2DL3,KIR2DL1,KIR2DL4,KIR3DL1,KIR3DL2" 6 KIR3DL1 - - "111141(54|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 42 - 0 "111141(155|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 401480PG male "research_filter, clinical_filter" PDHC59420 Y 23067641 23178667 111027 Loss 0 0.858233 28 4112 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "111027#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - - - 11 37 - 0 "28793(5|Kidd(2008),Durbin(2010),Kidd(2010b))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" IAEL45337 X 125024099 125135006 110908 Loss 1 0.945982 40 2843 chas 99.99 Loss 0 - 0 - Loss-- 48 100 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - "50072(3|Conrad(2009),Shaikh(2009))" - - 48 - 0 "110908(14|Conrad(2009),Jakobsson(2008),Shaikh(2009),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" LHPN45961 8 103413681 103524511 110831 Gain 3 0.900083 63 1787 chas 89.2 Gain 99.73 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 8q22.3 - UBR5 1 UBR5 1 - - 1315(1|McKernan(2009)) 110831(1|de Smith(2007)) - - 45 - 0 "110831(13|Wong(2007),McKernan(2009),Durbin(2010),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" VVDA27035 13 64262270 64373057 110788 Loss 1 0.900512 100 1119 chas 98.22 Loss 99.11 Loss 100 Loss LossLossLoss 71 97.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 67456(1|Kidd(2008)) "110788(8|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 55 71 - 0 "110788(17|Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400377WJ male "research_filter, clinical_filter" IOGU88526 3 162521297 162632020 110724 Loss 1 0.878471 21 5536 chas 0 - 0 - 0 - --- 74 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "110724(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 74 - 0 "110724(269|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401623SN male - UAVX81306 8 16432279 16543002 110724 Loss 1 0.921243 64 1757 chas 90.33 Loss 93.91 Loss 93.91 Loss LossLossLoss 84 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - - 0 - 0 - - - "110724(7|Jakobsson(2008),Korbel(2007),Pinto(2007),Redon(2006),Perry(2008))" 451(1|Park(2010)) - 84 - 0 "110724(13|Korbel(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400643LD male "research_filter, clinical_filter" BHQW11777 9 128434623 128545295 110673 Gain 3 0.902672 100 1117 chas 98.49 Gain 100 Gain 100 Gain GainGainGain 58 NA NA NA "ChAS,IPN,NXS,PTK" 9q33.3 - "MAPKAP1,PBX3" 2 "MAPKAP1,PBX3" 2 - - - "67508(4|Park(2010),Wang(2007),Conrad(2009))" 1(1|Levy(2007)) - 57 - 0 "101816(61|Wang(2007),Conrad(2009),Itsara(2009),Durbin(2010),Park(2010),Wilson(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" HOIC14625 5 113078457 113189063 110607 Loss 1 0.916019 64 1755 chas 94.76 Loss 97.38 Loss 97.38 Loss LossLossLoss 63 96.66 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "5q22.2,5q22.3" - - 0 - 0 - - - 8931(2|Shaikh(2009)) - - 63 - 0 "110607(6|Itsara(2009),Teague(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" YLSX27992 3 12562880 12673359 110480 Gain 3 0.89721 352 314 chas 84.54 Gain 91.33 Gain 96.19 Gain GainGainGain 168 94.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p25.2 - "LOC100129480,MKRN2,RAF1,TSEN2" 4 "LOC100129480,MKRN2,RAF1,TSEN2" 4 "RAF1,TSEN2" - 110480(1|Kidd(2008)) "110480(4|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008))" 311(2|Matsuzaki(2009)) - 167 - 0 "110480(15|Conrad(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" NOAU21003 12 19466999 19577135 110137 Gain 3 0.883461 90 1237 chas 35.02 Gain 71.62 Gain 0 - GainGain- 53 92.76 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "110137(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 53 - 0 "110137(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400627CC female "research_filter, clinical_filter" YMBI36841 14 106667115 106777210 110096 Gain 3 0.894585 58 1931 chas 100 Gain 77.64 Gain 0 - GainGain- 56 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 14q32.33 - LINC00226 1 LINC00226 1 - - - "110096(49|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 21 56 - 0 "110096(316|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401321CE female "research_filter, clinical_filter" XBAT84080 17 36300466 36410559 110094 Gain 4 0.936205 31 3669 chas 0 - 97.27 Gain 0 - -Gain- 4 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "110094(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "110094(123|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400186WC female research_filter KIIK22313 17 36300466 36410559 110094 Gain 4 0.947792 31 3669 chas 0 - 100 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "110094(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "110094(123|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401496SL male research_filter SXNO44692 15 100389700 100499744 110045 Loss 1 0.915016 76 1467 chas 100 Loss 100 Loss 100 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - - 0 - 0 - "110045#1%""15q26 overgrowth syndrome"":3163423" - "110045(38|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Jakobsson(2008),Ju(2010),Kim(2009))" "2248(3|Levy(2007),Kim(2009))" 40 66 - 0 "110045(81|Ju(2010),Redon(2006),Wang(2007),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401949MN male "research_filter, clinical_filter" BNID76344 12 19467159 19577135 109977 Gain 3 0.906668 88 1264 chas 92.43 Gain 92.57 Gain 0 - GainGain- 52 92.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" LTTD14271 12 19467159 19577135 109977 Gain 3 0.906044 88 1264 chas 92.81 Gain 92.95 Gain 0 - GainGain- 52 88.44 Gain "GTC,IP6" "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" ILTL12466 12 19467159 19577135 109977 Gain 4 0.944999 88 1264 chas 92.43 Gain 96.59 Gain 96.59 Gain GainGainGain 52 92.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" LHMB79045 12 19467159 19577135 109977 Gain 3 0.891253 88 1264 chas 60.62 Gain 93.13 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401285HN male "research_filter, clinical_filter" DCUN59806 12 19467159 19577135 109977 Gain 3 0.88652 88 1264 chas 93.08 Gain 68.26 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" IBGK33359 12 19467159 19577135 109977 Gain 3 0.895184 88 1264 chas 88.64 Gain 100 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" UMLY49839 12 19467159 19577135 109977 Gain 3 0.886046 88 1264 chas 92.33 Gain 75.13 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "109977(7|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "109977(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" XUUY89365 X 120009900 120119760 109861 Loss 1 0.912642 42 2679 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109861(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109861(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400846MC female clinical_filter VVDA27035 X 120009900 120119760 109861 Gain 2 0.870082 42 2679 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109861(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109861(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400377WJ male - QMCQ87044 X 120009900 120119760 109861 Gain 2 0.861113 42 2679 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109861(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109861(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400152MR male - THXY16685 X 120009900 120119745 109846 Loss 1 0.862708 41 2746 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109846(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109846(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400114GR female clinical_filter UCFR59681 X 120009900 120119745 109846 Gain 2 0.857492 41 2746 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109846(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109846(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400319HT male - KKJQ91569 X 120009900 120119745 109846 Gain 3 0.881325 41 2746 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "109846(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 0 - 0 "109846(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400258BC female - WQLL63278 X 120005085 120114894 109810 Gain 2 0.917119 52 2153 chas 0 - 0 - 0 - --- 1 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10,CT47B1" 13 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10,CT47B1" 13 - - - "109519(8|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 54 1 - 0 "109810(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400503HD male clinical_filter TJGR62389 10 17927541 18037328 109788 Loss 1 0.882381 13 9149 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109788(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400207HN male - XGGI83581 10 17927541 18037328 109788 Loss 1 0.869575 13 9149 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109788(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400486LS female - PDHC59420 Y 25727452 25837107 109656 Loss 0 0.822998 148 745 chas 82.75 Loss 0 - 0 - Loss-- 15 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "109656#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "109656(2|McCarroll(2008),Perry(2008))" - 100 15 - 0 "109656(4|Locke(2006),McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" APOV19283 2 111643865 111753488 109624 Loss 1 0.917991 108 1024 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 78 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - ACOXL 1 ACOXL 1 - - - 4532(2|Kim(2009)) - 1 77 - 0 "109624(6|Wong(2007),Kim(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" BHQW11777 7 29670705 29780221 109517 Gain 3 0.896052 70 1587 chas 88.83 Gain 91.92 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" 7p14.3 - "MIR550A3,DPY19L2P3,LOC646762,ZNRF2P2" 4 "MIR550A3,DPY19L2P3,LOC646762,ZNRF2P2" 4 - - - "109517(17|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 97 57 - 0 "109517(80|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),McCarroll(2008),Park(2010),Locke(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" TLUK35377 8 16416409 16525917 109509 Loss 1 0.933588 64 1738 chas 100 Loss 100 Loss 100 Loss LossLossLoss 81 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p22 - - 0 - 0 - - - "109509(7|Jakobsson(2008),Korbel(2007),Pinto(2007),Redon(2006),Perry(2008))" 451(1|Park(2010)) - 81 - 0 "109509(13|Korbel(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" YREU97751 9 5106686 5216151 109466 Gain 3 0.88415 125 882 chas 65.91 Gain 94.87 Gain 99.08 Gain GainGainGain 97 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.1 - "INSL6,JAK2" 2 "INSL6,JAK2" 2 JAK2 - - "9126(13|McCarroll(2005),Conrad(2009),Korbel(2007),Matsuzaki(2009))" 901(1|Matsuzaki(2009)) - 96 - 0 "109466(15|Conrad(2009),Korbel(2007),Itsara(2009),Durbin(2010),Wilson(2010),Wong(2007),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" ERKP22336 6 162369856 162479278 109423 Loss 1 0.931171 164 671 chas 95.74 Loss 97.99 Loss 98.02 Loss LossLossLoss 104 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 PARK2 1 PARK2 - - "109423(3|Conrad(2009),Pinto(2007),Matsuzaki(2009))" 1351(4|Matsuzaki(2009)) - 104 PARK2#asd_candidate 1 "109423(36|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" NKHQ61532 10 17927541 18036656 109116 Loss 1 0.885362 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400588BE female - SRJV59260 10 17927541 18036656 109116 Loss 1 0.875192 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400737GC female - ZPIM60940 10 17927541 18036656 109116 Loss 1 0.890162 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400802DP female - LTTD14271 10 17927541 18036656 109116 Loss 1 0.891193 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400050RL female - GYLD25146 10 17927541 18036656 109116 Loss 1 0.899989 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400132HN female - WZBZ52169 10 17927541 18036656 109116 Loss 1 0.888495 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401619BT female - VPWL90389 10 17927541 18036656 109116 Loss 1 0.891182 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401912HD male - TLUK35377 10 17927541 18036656 109116 Loss 1 0.892057 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400053LE female - ILTL12466 10 17927541 18036656 109116 Loss 1 0.883872 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400124FR male - NUHG48677 10 17927541 18036656 109116 Loss 1 0.872617 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 40050SB female - SUUF34898 10 17927541 18036656 109116 Loss 1 0.875862 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400669LD male - GAAC71530 10 17927541 18036656 109116 Loss 1 0.886989 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400506GN female - NEPL50430 10 17927541 18036656 109116 Loss 1 0.88393 12 9919 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401084BD male - QUIW42968 10 17927541 18036656 109116 Loss 1 0.909719 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400926LJ female - AVAH45014 10 17927541 18036656 109116 Loss 1 0.900098 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401401BA male - VAON88685 10 17927541 18036656 109116 Loss 1 0.881526 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401783BD male - NFIQ53983 10 17927541 18036656 109116 Loss 1 0.875378 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401719RL female - GWDY85049 10 17927541 18036656 109116 Loss 1 0.885526 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401093VL female - HEJH85210 10 17927541 18036656 109116 Loss 1 0.890267 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401884WJ male - ZKED26020 10 17927541 18036656 109116 Loss 1 0.877714 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401652HL female - JFDL89779 10 17927541 18036656 109116 Loss 1 0.902388 12 9919 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 54 7 - 0 "109116(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401526WB male - NUHG48677 3 47927729 48036708 108980 Gain 3 0.897934 92 1197 chas 96.05 Gain 98.01 Gain 0 - GainGain- 45 96.06 Gain "GTC,IP6" "ChAS,IPN,NXS" 3p21.31 - MAP4 1 MAP4 1 - - - 1609(1|Conrad(2009)) - - 45 - 0 "108980(8|Pinto(2011),Conrad(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 40050SB female "research_filter, clinical_filter" KAAS48951 3 47927729 48036708 108980 Gain 3 0.888622 92 1197 chas 92.98 Gain 95.06 Gain 95.05 Gain GainGainGain 45 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - MAP4 1 MAP4 1 - - - 1609(1|Conrad(2009)) - - 45 - 0 "108980(8|Pinto(2011),Conrad(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401504RJ male "research_filter, clinical_filter" YMNK31782 12 7951763 8060702 108940 Gain 3 0.892371 76 1452 chas 80.05 Gain 99.04 Gain 0 - GainGain- 53 57.9 "-,Gain" "BS,IP6" "ChAS,IPN,NXS" 12p13.31 - SLC2A14 1 SLC2A14 1 - - 46871(2|Kidd(2008)) "108940(56|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Gusev(2009),Itsara(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 748(1|Perry(2008)) 19 53 - 0 "108940(165|Wang(2007),Redon(2006),Perry(2008),Gusev(2009),Itsara(2009),Levy(2007),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Perry(2008b),Pinto(2011),Jakobsson(2008),Park(2010),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400438DB female "research_filter, clinical_filter" CSHY74530 8 68020835 68129755 108921 Gain 3 0.898184 96 1146 chas 31 Gain 96.13 Gain 100 Gain GainGainGain 36 95.44 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q13.2 - "CSPP1,ARFGEF1" 2 "CSPP1,ARFGEF1" 2 - - - - - 1 35 - 0 55889(3|Pinto(2011)) TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" TGWW40273 8 68020835 68129755 108921 Gain 3 0.898145 96 1146 chas 83.53 Gain 99.49 Gain 100 Gain GainGainGain 36 NA NA NA "ChAS,IPN,NXS,PTK" 8q13.2 - "CSPP1,ARFGEF1" 2 "CSPP1,ARFGEF1" 2 - - - - - 1 35 - 0 55889(3|Pinto(2011)) TRUE TRUE ipn_yes algo_yes NA 400140WM female "research_filter, clinical_filter" YWQF89241 11 51096245 51205141 108897 Loss 1 0.888229 15 7778 chas 0 - 0 - 0 - --- 13 0 - - ChAS 11p11.12 - - 0 - 0 - - - "108897(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108897(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400509CJ female - GYLD25146 11 51096359 51205141 108783 Loss 1 0.897692 13 9065 chas 0 - 0 - 0 - --- 13 0 - - ChAS 11p11.12 - - 0 - 0 - - - "108783(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108783(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400132HN female - EGQB52790 11 51096359 51205141 108783 Loss 1 0.905648 13 9065 chas 0 - 0 - 0 - --- 13 0 - - ChAS 11p11.12 - - 0 - 0 - - - "108783(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108783(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400277LM female - LLZZ76842 11 51096359 51205141 108783 Loss 1 0.894929 13 9065 chas 0 - 0 - 0 - --- 13 0 - - ChAS 11p11.12 - - 0 - 0 - - - "108783(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108783(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400354TJ female - NGFJ29672 11 51096359 51205141 108783 Loss 1 0.906702 13 9065 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "108783(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108783(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400269DA female - SBQG40276 11 51096359 51205141 108783 Loss 1 0.894342 13 9065 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "108783(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "108783(49|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400145BL female - PWPH55056 X 115939213 116047963 108751 Gain 2 0.937367 58 1907 chas 100 Gain 0 - 0 - Gain-- 72 NA NA NA "ChAS,IPN" Xq23 - - 0 - 0 - - - "108751(5|Conrad(2009),Redon(2006),Shaikh(2009),Perry(2008))" "1095(2|McKernan(2009),Perry(2008))" 1 72 - 0 "108751(12|Conrad(2009),Redon(2006),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401804FG male "research_filter, clinical_filter" JKIG25467 4 69435889 69544336 108448 Loss 0 0.94759 57 1936 chas 97.81 Loss 52.04 Loss 47.74 Loss LossLossLoss 44 46.19 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108448(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108448(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400645KM male "research_filter, clinical_filter" IOGU88526 11 50480771 50589217 108447 Loss 1 0.893454 18 6379 chas 10.79 Loss 0 - 0 - Loss-- 10 NA NA NA "ChAS,IPN" 11p11.12 - - 0 - 0 - - - "108447(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - - 9 - 0 "108447(23|Itsara(2009),Pinto(2011),Wong(2007),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401623SN male research_filter YBMF74034 4 69435889 69544335 108447 Loss 0 0.934843 56 1971 chas 97.81 Loss 26.15 Loss 47.74 Loss LossLossLoss 44 46.19 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" MTFT89424 4 69435889 69544335 108447 Gain 3 0.887408 56 1971 chas 46.18 Gain 45.26 Gain 0 - GainGain- 44 63.82 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" ZVRQ32621 4 69435889 69544335 108447 Loss 1 0.939387 56 1971 chas 97.81 Loss 29.37 Loss 44.2 Loss LossLossLoss 44 49.28 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401176BD male "research_filter, clinical_filter" VABQ19693 4 69435889 69544335 108447 Gain 3 0.897162 56 1971 chas 46.18 Gain 46.12 Gain 0 - GainGain- 44 42.25 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" MDAA91863 4 69435889 69544335 108447 Loss 0 0.940967 56 1971 chas 97.81 Loss 52.04 Loss 47.74 Loss LossLossLoss 44 46.19 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" NLDQ95097 4 69435889 69544335 108447 Loss 0 0.942387 56 1971 chas 97.81 Loss 30.59 Loss 45.26 Loss LossLossLoss 44 46.19 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" EJHE40652 4 69435889 69544335 108447 Loss 1 0.939616 56 1971 chas 97.81 Loss 29.37 Loss 46.13 Loss LossLossLoss 44 46.19 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" DUEF32956 4 69435889 69544335 108447 Gain 3 0.897351 56 1971 chas 96.4 Gain 61.78 Gain 0 - GainGain- 44 44.45 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401190WC male "research_filter, clinical_filter" AEJP39672 4 69435889 69544335 108447 Loss 1 0.937541 56 1971 chas 97.81 Loss 29.37 Loss 45.27 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401234MB male "research_filter, clinical_filter" DBFY56089 4 69435889 69544335 108447 Gain 3 0.892848 56 1971 chas 0 - 44.4 Gain 0 - -Gain- 44 49.27 Gain GTC "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 400458LS female "research_filter, clinical_filter" AJUD27157 4 69435889 69544335 108447 Gain 3 0.894093 56 1971 chas 0 - 47.74 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108447(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108447(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401075MN female "research_filter, clinical_filter" UYPJ72832 15 43868571 43976997 108427 Loss 1 0.855951 75 1465 chas 28.28 Loss 17.13 Loss 0 - LossLoss- 25 77.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 15q15.3 - "STRC,PPIP5K1,CATSPER2,CKMT1B" 4 "STRC,PPIP5K1,CATSPER2,CKMT1B" 4 STRC - - "108427(17|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 25 - 0 "108427(40|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401240ML female "research_filter, clinical_filter" WYBU35088 4 69435889 69544297 108409 Loss 1 0.933357 55 2007 chas 97.85 Loss 26.91 Loss 45.28 Loss LossLossLoss 44 46.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108409(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 44 - 0 "108409(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400579HJ female "research_filter, clinical_filter" MKJI51363 X 88050068 88158454 108387 Gain 3 0.907521 64 1720 chas 99.99 Gain 0 - 0 - Gain-- 72 NA NA NA "ChAS,IPN" Xq21.31 - - 0 - 0 - - - - - - 72 - 0 "108387(7|Shaikh(2009),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" NEPL50430 4 69435967 69544335 108369 Loss 1 0.941585 54 2044 chas 97.82 Loss 29.32 Loss 44.16 Loss LossLossLoss 41 49.25 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "108369(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 46 41 - 0 "108369(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401084BD male "research_filter, clinical_filter" PEZC72297 Y 25501750 25609960 108211 Gain 2 0.843543 132 826 chas 0 - 0 - 0 - --- 44 0 - - ChAS Yq11.223 - - 0 - 0 - "108211#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "108211(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 44 - 0 "108211(6|McCarroll(2008),Durbin(2010),Perry(2008),Campbell(2011))" TRUE TRUE ipn_no algo_no affy6_no 400298ME male clinical_filter OBAS32636 1 144279310 144387477 108168 Gain 3 0.893499 28 4006 chas 0 - 0 - 0 - --- 1 0 - - ChAS 1q21.1 - "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "108168(8|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" "1065(11|Matsuzaki(2009),Perry(2008))" 100 1 - 0 "108168(62|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400249BC female - ZZDG28391 1 144279310 144387477 108168 Gain 3 0.882424 28 4006 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.1 - "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "108168(8|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" "1065(11|Matsuzaki(2009),Perry(2008))" 100 1 - 0 "108168(62|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400801HS female - GNMX63810 1 144279310 144387477 108168 Gain 4 0.891989 28 4006 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.1 - "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "108168(8|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008))" "1065(11|Matsuzaki(2009),Perry(2008))" 100 1 - 0 "108168(62|Conrad(2009),Wong(2007),Perry(2008),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401067BD male - DQOA73385 20 29436789 29544851 108063 Loss 1 0.874781 36 3087 chas 27.07 Loss 0 - 0 - Loss-- 34 NA NA NA "ChAS,IPN" 20q11.21 - - 0 - 0 - - - "108063(25|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008),Wheeler(2008))" - 100 34 - 0 "108063(29|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Pang(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Korbel(2007))" TRUE TRUE ipn_yes algo_yes NA 401592NR male "research_filter, clinical_filter" LNDH30137 6 31348022 31456073 108052 Gain 3 0.890964 116 939 chas 13.21 Gain 89.66 Gain 0 - GainGain- 118 NA NA NA "ChAS,IPN,NXS" 6p21.33 - "HCP5,HCG26,MICA" 3 "HCP5,HCG26,MICA" 3 - - - "108052(67|Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Bentley(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007),Matsuzaki(2009),Kidd(2008),Wang(2008),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),McCarroll(2008),Park(2010))" "100109(17|Wang(2008),Conrad(2009),Levy(2007),Matsuzaki(2009))" 30 118 - 0 "108052(177|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401808PS male "research_filter, clinical_filter" VWRZ18168 5 173555010 173663022 108013 Gain 3 0.911326 76 1440 chas 93.94 Gain 97.03 Gain 0 - GainGain- 86 97.1 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q35.2 - - 0 - 0 - - - "23813(2|Gusev(2009),McKernan(2009))" 316(1|Bentley(2008)) - 86 - 0 "67178(24|Gusev(2009),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400890IT male "research_filter, clinical_filter" CSHY74530 X 134746949 134854875 107927 Gain 3 0.919972 416 260 chas 81.64 Gain 0 - 0 - Gain-- 73 93.55 Gain "BS,GTC,IP6" "ChAS,IPN" Xq26.3 - CT45A1 1 CT45A1 1 - - 14198(1|Kidd(2008)) "107927(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" 784(1|Perry(2008)) 47 73 - 0 "107927(30|Conrad(2009),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" DLXG88049 X 79903169 80011045 107877 Gain 2 0.930833 252 429 chas 99.05 Gain 0 - 0 - Gain-- 53 NA NA NA "ChAS,IPN" Xq21.1 - BRWD3 1 BRWD3 1 BRWD3 - - 21428(1|de Smith(2007)) 715(1|Ahn(2009)) - 52 BRWD3#id_known 1 "107877(7|Ahn(2009),Durbin(2010),Shaikh(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" MJBR37071 19 22245898 22353743 107846 Loss 1 0.89761 84 1299 chas 92.79 Loss 54.36 Loss 96.39 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - ZNF257 1 ZNF257 1 - - - "107846(10|Korbel(2007),Redon(2006),Perry(2008),Pinto(2007),Kim(2009),Shaikh(2009))" 464(1|Perry(2008)) 16 73 - 0 "107846(44|Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Wang(2008),Kim(2009),Durbin(2010),Kidd(2008),Pinto(2007),Locke(2006),Jakobsson(2008),Korbel(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" NZSQ74406 22 18916843 19024659 107817 Gain 3 0.915499 52 2114 chas 31.7 Gain 90.78 Gain 90.78 Gain GainGainGain 60 83.61 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 PRODH "107817#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "107817(34|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1556(2|Conrad(2009)) 56 60 - 0 "107817(85|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" NBJX82400 22 18916843 19024659 107817 Gain 3 0.902888 52 2114 chas 79.08 Gain 81.55 Gain 90.78 Gain GainGainGain 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 PRODH "107817#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "107817(34|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1556(2|Conrad(2009)) 56 60 - 0 "107817(85|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400014SL female "research_filter, clinical_filter" JSHH93314 22 18916843 19024659 107817 Loss 1 0.914521 52 2114 chas 81.53 Loss 90.78 Loss 90.78 Loss LossLossLoss 60 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 PRODH "107817#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "107817(34|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1556(2|Conrad(2009)) 56 60 - 0 "107817(85|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" GVAB34760 22 18916843 19024659 107817 Gain 3 0.917045 52 2114 chas 81.36 Gain 90.78 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 "PRODH,DGCR9,DGCR2,DGCR5,DGCR10" 5 PRODH "107817#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "107817(34|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1556(2|Conrad(2009)) 56 60 - 0 "107817(85|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" WZBZ52169 14 44820190 44927982 107793 Gain 3 0.899062 84 1298 chas 91.57 Gain 100 Gain 0 - GainGain- 69 100 Gain "BS,GTC" "ChAS,IPN,NXS" 14q21.2 - - 0 - 0 - - - "107793(3|Itsara(2009),Pinto(2007),Jakobsson(2008))" 942(1|McKernan(2009)) - 68 - 0 "107793(12|Teague(2010),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401619BT female "research_filter, clinical_filter" KRCX57170 14 44820190 44927982 107793 Gain 3 0.898684 84 1298 chas 100 Gain 100 Gain 100 Gain GainGainGain 69 99.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "107793(3|Itsara(2009),Pinto(2007),Jakobsson(2008))" 942(1|McKernan(2009)) - 68 - 0 "107793(12|Teague(2010),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" XMAJ27378 X 140558642 140666276 107635 Loss 1 0.884183 16 7175 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 107635(1|Kidd(2008)) "107635(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 98 7 - 0 "107635(17|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Locke(2006),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401100SJ female - QRSF74396 5 101622552 101730121 107570 Gain 3 0.889845 79 1379 chas 85.66 Gain 89.25 Gain 0 - GainGain- 48 NA NA NA "ChAS,IPN,NXS" 5q21.1 - "SLCO4C1,SLCO6A1" 2 "SLCO4C1,SLCO6A1" 2 - - - 28198(1|Shaikh(2009)) - - 48 - 0 "107570(10|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401500OM male "research_filter, clinical_filter" VLMR80827 17 36311009 36418529 107521 Gain 3 0.904886 30 3707 chas 0 - 92.66 Gain 0 - -Gain- 4 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "101832(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "107521(115|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401630MK female research_filter TZXJ50703 17 36311009 36418529 107521 Gain 3 0.903231 30 3707 chas 0 - 89.79 Gain 0 - -Gain- 4 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "101832(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "107521(115|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400978JG female research_filter GVUJ86973 19 54730238 54837615 107378 Gain 3 0.901459 76 1431 chas 21.72 Gain 99.86 Gain 0 - GainGain- 58 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "MIR4752,LILRB5,LILRB2,LILRA6,LILRA5,LILRA3" 6 "MIR4752,LILRB5,LILRB2,LILRA6,LILRA5,LILRA3" 6 - - - "87001(67|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "1241(3|Pang(2010),Matsuzaki(2009))" 31 57 - 0 "107378(384|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400914ER male "research_filter, clinical_filter" ZQFY18932 19 54730238 54837615 107378 Gain 3 0.896286 76 1431 chas 100 Gain 99.98 Gain 0 - GainGain- 58 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "MIR4752,LILRB5,LILRB2,LILRA6,LILRA5,LILRA3" 6 "MIR4752,LILRB5,LILRB2,LILRA6,LILRA5,LILRA3" 6 - - - "87001(67|Ju(2010),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Pang(2010),Shaikh(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Kim(2009),Wang(2007),Ahn(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Gusev(2009),Altshuler(2010),Park(2010))" "1241(3|Pang(2010),Matsuzaki(2009))" 31 57 - 0 "107378(384|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" FPLE23103 3 162524824 162632090 107267 Loss 1 0.893788 20 5645 chas 0 - 97.34 Loss 98.25 Loss #NAME? 73 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "107267(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 73 - 0 "107267(266|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400337HG male research_filter JGYN82468 8 4314154 4421394 107241 Loss 1 0.924589 124 871 chas 99.86 Loss 99.92 Loss 99.92 Loss LossLossLoss 107 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - CSMD1 1 - 0 - - - "107241(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Gusev(2009),Pinto(2007),Shaikh(2009),Mills(2006))" "696(5|Wang(2008),Bentley(2008),Mills(2006))" - 107 - 0 "107241(52|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Wang(2008),Durbin(2010),Bentley(2008),Gusev(2009),Pinto(2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" QRSF74396 14 22837283 22944507 107225 Loss 1 0.879363 148 729 chas 0 - 88.73 Loss 0 - -Loss- 87 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "107225(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 87 - 0 "107225(94|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401500OM male "research_filter, clinical_filter" JITZ20982 3 162524824 162632001 107178 Loss 1 0.874694 18 6304 chas 0 - 93.44 Loss 98.25 Loss #NAME? 71 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "107178(33|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 71 - 0 "107178(266|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401180GR male research_filter OOSY20649 21 23603282 23710385 107104 Loss 1 0.916853 72 1508 chas 84.49 Loss 84.5 Loss 87.7 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 21q21.1 - - 0 - 0 - - - "76778(17|Wang(2007),Ahn(2009),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Redon(2006),Kim(2009),Shaikh(2009))" "1705(4|Park(2010),Shaikh(2009))" - 77 - 0 "76778(118|Teague(2010),Ahn(2009),Pinto(2011),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Levy(2007),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Altshuler(2010),Campbell(2011),Park(2010),Jakobsson(2008),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401817MC female "research_filter, clinical_filter" FMEA92817 X 140558642 140665596 106955 Loss 1 0.871656 14 8227 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 106955(1|Kidd(2008)) "106955(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 98 7 - 0 "106955(17|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Locke(2006),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401175FA female - KECG80750 5 134008649 134115501 106853 Gain 3 0.89767 88 1228 chas 89.87 Gain 99.81 Gain 0 - GainGain- 37 89.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q31.1 - "CAMLG,SEC24A,DDX46" 3 "CAMLG,SEC24A,DDX46" 3 - - - - - - 36 - 0 "106853(6|Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400893ZE male "research_filter, clinical_filter" AIKT30285 17 36243781 36350584 106804 Loss 1 0.885401 16 7120 chas 0 - 0 - 0 - --- 4 0 - - ChAS 17q12 - "LOC284100,TBC1D3,TBC1D3F" 3 "LOC284100,TBC1D3,TBC1D3F" 3 - - 53273(1|Kidd(2008)) "106804(19|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 4 - 0 "106804(162|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Alkan(2009),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400618GC male - PUOR77387 10 134694685 134801425 106741 Gain 4 0.953427 88 1226 chas 84.4 Gain 87.16 Gain 87.15 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - C10orf93 1 C10orf93 1 - - - "103565(6|Park(2010),Wang(2007),Redon(2006),Matsuzaki(2009))" "3215(12|Conrad(2009),Matsuzaki(2009),Levy(2007),Pang(2010),Park(2010),Mills(2006))" - 55 - 0 "106741(49|Teague(2010),Wong(2007),Jakobsson(2008),Conrad(2009),Wang(2007),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Pinto(2011),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401603HH female "research_filter, clinical_filter" EGQB52790 1 248688587 248795277 106691 Loss 1 0.911286 60 1808 chas 39.44 Loss 35.53 Loss 40.68 Loss LossLossLoss 43 43.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" VPWL90389 1 248688587 248795277 106691 Loss 1 0.90908 60 1808 chas 39.4 Loss 43.29 Loss 79.95 Loss LossLossLoss 43 59.28 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" ELGU40718 1 248688587 248795277 106691 Loss 1 0.895494 60 1808 chas 39.44 Loss 40.68 Loss 46.64 Loss LossLossLoss 43 43.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401259LS female "research_filter, clinical_filter" VOUF55858 1 248688587 248795277 106691 Loss 1 0.902022 60 1808 chas 39.4 Loss 37.45 Loss 40.68 Loss LossLossLoss 43 43.19 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400338SR male "research_filter, clinical_filter" GQXG36971 1 248688587 248795277 106691 Loss 1 0.893617 60 1808 chas 39.4 Loss 45.02 Loss 54.3 Loss LossLossLoss 43 43.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" GEZQ95890 1 248688587 248795277 106691 Loss 1 0.908131 60 1808 chas 39.4 Loss 40.68 Loss 40.68 Loss LossLossLoss 43 43.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" EMKM20452 1 248688587 248795277 106691 Loss 1 0.889725 60 1808 chas 39.44 Loss 37.77 Loss 40.68 Loss LossLossLoss 43 59.28 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" AOYC46859 1 248688587 248795277 106691 Loss 1 0.909035 60 1808 chas 39.4 Loss 42.46 Loss 42.46 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400307HW male "research_filter, clinical_filter" MUIH56067 1 248688587 248795277 106691 Loss 1 0.90697 60 1808 chas 38.68 Loss 39.9 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" ZRKC95930 1 248688587 248795277 106691 Loss 1 0.892012 60 1808 chas 39.44 Loss 44.13 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" JHGL98054 1 248688587 248795277 106691 Loss 1 0.90204 60 1808 chas 39.44 Loss 40.68 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" LHPN45961 1 248688587 248795277 106691 Loss 1 0.915511 60 1808 chas 39.4 Loss 44.13 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" RLDP86471 1 248688587 248795277 106691 Loss 1 0.899824 60 1808 chas 39.44 Loss 40.68 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400329HJ female "research_filter, clinical_filter" LMJA76842 1 248688587 248795277 106691 Loss 1 0.894514 60 1808 chas 39.44 Loss 40.68 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" CAYM40684 1 248688587 248795277 106691 Loss 1 0.897396 60 1808 chas 39.44 Loss 44.13 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" AVAH45014 1 248688587 248795277 106691 Loss 1 0.894154 60 1808 chas 39.4 Loss 37.45 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" BLGS11062 1 248688587 248795277 106691 Loss 1 0.901622 60 1808 chas 39.44 Loss 44.13 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401714BM female "research_filter, clinical_filter" UKYN40755 1 248688587 248795277 106691 Loss 1 0.909536 60 1808 chas 39.4 Loss 44.12 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401969DR male "research_filter, clinical_filter" GBOO31083 1 248688587 248795277 106691 Loss 1 0.902459 60 1808 chas 39.44 Loss 40.68 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400282RA female "research_filter, clinical_filter" RPZL61223 1 248688587 248795277 106691 Loss 1 0.899644 60 1808 chas 39.44 Loss 38.28 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" NGFJ29672 1 248688587 248795277 106691 Loss 1 0.898782 60 1808 chas 39.44 Loss 43.34 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400269DA female "research_filter, clinical_filter" LOOD16085 1 248688587 248795277 106691 Loss 1 0.882765 60 1808 chas 39.44 Loss 37.72 Loss 77.96 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400376SJ female "research_filter, clinical_filter" KWYE93203 1 248688587 248795277 106691 Loss 1 0.906162 60 1808 chas 39.44 Loss 38.48 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401357MH male "research_filter, clinical_filter" DMPI37172 1 248688587 248795277 106691 Loss 1 0.916386 60 1808 chas 39.44 Loss 39.43 Loss 44.13 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400287BP male "research_filter, clinical_filter" QRNV11451 1 248688587 248795277 106691 Loss 1 0.883065 60 1808 chas 39.44 Loss 24.35 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" NJNE14201 1 248688587 248795277 106691 Loss 1 0.900567 60 1808 chas 39.44 Loss 42.46 Loss 79.95 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401393JW male "research_filter, clinical_filter" VZCC67569 1 248688587 248795277 106691 Loss 1 0.892173 60 1808 chas 39.44 Loss 26.23 Loss 43.34 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" RPWI18802 1 248688587 248795277 106691 Loss 1 0.910344 60 1808 chas 39.44 Loss 40.68 Loss 40.68 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" BWCN37814 1 248688587 248795277 106691 Loss 1 0.903807 60 1808 chas 39.44 Loss 43.34 Loss 43.34 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401966SR male "research_filter, clinical_filter" RAQB29487 1 248688587 248795277 106691 Loss 1 0.914385 60 1808 chas 39.44 Loss 33.46 Loss 56.28 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401746WW male "research_filter, clinical_filter" NOIN63241 1 248688587 248795277 106691 Loss 1 0.909489 60 1808 chas 39.44 Loss 43.34 Loss 45.21 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400641WJ female "research_filter, clinical_filter" ZGTI52802 1 248688587 248795277 106691 Loss 1 0.897802 60 1808 chas 39.44 Loss 36.91 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" ZWJR15881 1 248688587 248795277 106691 Loss 1 0.902584 60 1808 chas 39.44 Loss 43.29 Loss 43.29 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106691(2|Kidd(2008),Ahn(2009))" "106691(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106691(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" YKER13969 1 248688602 248795277 106676 Loss 1 0.906801 59 1839 chas 39.45 Loss 36.36 Loss 45.03 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106676(2|Kidd(2008),Ahn(2009))" "106676(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "106676(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401372RR male "research_filter, clinical_filter" NOAU21003 1 248688587 248795218 106632 Loss 1 0.881382 58 1870 chas 39.41 Loss 38.86 Loss 40.65 Loss LossLossLoss 42 43.17 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106632(2|Kidd(2008),Ahn(2009))" "106632(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 41 - 0 "106632(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400627CC female "research_filter, clinical_filter" VYEA28313 9 94413993 94520621 106629 Gain 3 0.907286 100 1077 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 64 99.78 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9q22.31 - ROR2 1 ROR2 1 ROR2 - - "30071(2|Kidd(2008),Shaikh(2009))" 681(1|McKernan(2009)) - 64 - 0 "63059(18|Kidd(2008),McKernan(2009),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400983PV female "research_filter, clinical_filter" OTMU34006 15 43907616 44014243 106628 Loss 1 0.879281 61 1777 chas 99.84 Loss 36.69 Loss 77.24 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,CKMT1A,CATSPER2" 3 "STRC,CKMT1A,CATSPER2" 3 STRC - - "106628(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 24 - 0 "106628(41|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402038MR male "research_filter, clinical_filter" BDAF16773 1 248688602 248795218 106617 Loss 1 0.878561 57 1903 chas 39.41 Loss 24.32 Loss 40.66 Loss LossLossLoss 41 59.26 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106617(2|Kidd(2008),Ahn(2009))" "106617(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "106617(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" HARD47518 1 248688602 248795218 106617 Loss 1 0.902714 57 1903 chas 39.41 Loss 39.27 Loss 40.66 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "106617(2|Kidd(2008),Ahn(2009))" "106617(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "106617(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" PYHX78792 11 4803968 4910477 106510 Loss 1 0.921271 156 687 chas 98.99 Loss 99.21 Loss 99.33 Loss LossLossLoss 92 98.17 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p15.4 - "OR51F2,OR51T1,OR52R1,OR51S1" 4 "OR51F2,OR51T1,OR52R1,OR51S1" 4 - - - 16394(2|Conrad(2009)) "1557(3|Conrad(2009),Matsuzaki(2009))" - 92 - 0 "106510(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401799DP male "research_filter, clinical_filter" TZXJ50703 15 77567142 77673459 106318 Loss 1 0.912439 60 1802 chas 97.82 Loss 98.91 Loss 98.92 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 15q24.3 - PEAK1 1 PEAK1 1 - - - "24869(2|de Smith(2007),Conrad(2009))" "764(2|Conrad(2009),Matsuzaki(2009))" 3 44 - 0 "106318(38|Pinto(2011),Kidd(2008),De(Smith_2007),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" FNEG58263 20 14801430 14907597 106168 Loss 1 0.924592 92 1166 chas 93.56 Loss 96.68 Loss 96.68 Loss LossLossLoss 130 94.01 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - "MACROD2-AS1,MACROD2" 2 MACROD2-AS1 1 - - - "106168(33|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1(1|Levy(2007)) - 130 - 0 "106168(110|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400836LK male "research_filter, clinical_filter" BTJZ41884 8 54859427 54965524 106098 Gain 3 0.89957 136 785 chas 88.7 Gain 94.36 Gain 94.36 Gain GainGainGain 48 NA NA NA "ChAS,IPN,NXS,PTK" 8q11.23 - "LYPLA1,RGS20,TCEA1" 3 "LYPLA1,RGS20,TCEA1" 3 - - - 1466(1|McKernan(2009)) - 3 48 - 0 "10581(7|Pinto(2011),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400068PW female "research_filter, clinical_filter" FGSE34256 9 74697949 74804032 106084 Loss 1 0.921084 89 1205 chas 98.59 Loss 99.14 Loss 99.14 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 9q21.13 - GDA 1 GDA 1 - - - - - - 65 - 0 "46107(3|Itsara(2009),Wong(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" NFIA96453 4 69435889 69541964 106076 Loss 0 0.946941 53 2039 chas 47.21 Loss 53.21 Loss 46.28 Loss LossLossLoss 44 47.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106076(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106076(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400069CN female "research_filter, clinical_filter" EXZC47846 4 69435889 69541963 106075 Loss 0 0.94484 52 2079 chas 47.21 Loss 46.28 Loss 53.21 Loss LossLossLoss 44 47.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400468OB female "research_filter, clinical_filter" OSRU53198 4 69435889 69541963 106075 Gain 3 0.882358 52 2079 chas 98.54 Gain 47.16 Gain 0 - GainGain- 44 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_no 400854SG male "research_filter, clinical_filter" KZTP77176 4 69435889 69541963 106075 Gain 3 0.88119 52 2079 chas 98.54 Gain 55.35 Gain 0 - GainGain- 44 47.22 Gain IP6 "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" FPEA56091 4 69435889 69541963 106075 Gain 3 0.888742 52 2079 chas 47.21 Gain 53.21 Gain 0 - GainGain- 44 50.37 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" DWHI65488 4 69435889 69541963 106075 Gain 3 0.890756 52 2079 chas 98.54 Gain 56.03 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400135DR male "research_filter, clinical_filter" VWYL75938 4 69435889 69541963 106075 Loss 0 0.94211 52 2079 chas 47.21 Loss 50.47 Loss 46.28 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401006ES female "research_filter, clinical_filter" QIUJ19845 4 69435889 69541963 106075 Gain 3 0.88888 52 2079 chas 98.54 Gain 48.8 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401853WR male "research_filter, clinical_filter" RJMG42549 4 69435889 69541963 106075 Gain 3 0.88761 52 2079 chas 98.54 Gain 48.8 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400749VW male "research_filter, clinical_filter" MJBR37071 4 69435889 69541963 106075 Gain 3 0.883163 52 2079 chas 98.54 Gain 42.47 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" VRMG83827 4 69435889 69541963 106075 Gain 3 0.879781 52 2079 chas 47.21 Gain 48.8 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401769CR male "research_filter, clinical_filter" LSSN67820 4 69435889 69541963 106075 Loss 0 0.940354 52 2079 chas 47.21 Loss 30.03 Loss 46.28 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" GVYY53861 4 69435889 69541963 106075 Gain 4 0.938999 52 2079 chas 47.21 Gain 100 Gain 100 Gain GainGainGain 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401214BJ male "research_filter, clinical_filter" ACWT82545 4 69435889 69541963 106075 Loss 0 0.937926 52 2079 chas 47.21 Loss 27.5 Loss 46.28 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" OUKT23649 4 69435889 69541963 106075 Gain 3 0.886774 52 2079 chas 98.54 Gain 23.67 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400450FG male "research_filter, clinical_filter" HXSU46589 4 69435889 69541963 106075 Gain 3 0.883757 52 2079 chas 0 - 46.27 Gain 0 - -Gain- 44 98.16 Gain GTC "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 401299ST female "research_filter, clinical_filter" IJPA28382 4 69435889 69541963 106075 Gain 3 0.890016 52 2079 chas 0 - 29.37 Gain 0 - -Gain- 44 50.37 Gain GTC "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 400103BN female "research_filter, clinical_filter" WUMM65746 4 69435889 69541963 106075 Gain 3 0.880789 52 2079 chas 0 - 5.8 Gain 0 - -Gain- 44 47.22 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" AZMC27188 4 69435889 69541963 106075 Gain 3 0.888411 52 2079 chas 0 - 33.7 Gain 0 - -Gain- 44 47.22 Gain IP6 "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" BOER26307 4 69435889 69541963 106075 Gain 3 0.887401 52 2079 chas 0 - 23.67 Gain 0 - -Gain- 44 98.16 Gain GTC "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes affy6_yes 400571WV female "research_filter, clinical_filter" BQMP83404 4 69435889 69541963 106075 Gain 3 0.879176 52 2079 chas 0 - 50.47 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 400474GF female "research_filter, clinical_filter" PDTM24300 4 69435889 69541963 106075 Gain 3 0.88335 52 2079 chas 0 - 26.66 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401036WS female "research_filter, clinical_filter" UIPG73190 4 69435889 69541963 106075 Gain 3 0.883751 52 2079 chas 0 - 53.21 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401809FU female "research_filter, clinical_filter" SMGW17663 4 69435889 69541963 106075 Gain 3 0.883363 52 2079 chas 0 - 48.8 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 400362TV female "research_filter, clinical_filter" IDVO19613 4 69435889 69541963 106075 Gain 3 0.883247 52 2079 chas 0 - 48.8 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106075(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106075(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401434VN female "research_filter, clinical_filter" JWQI23251 19 55228948 55334978 106031 Gain 3 0.901679 38 2865 chas 0 - 0 - 0 - --- 45 92.19 Gain "BS,GTC,IP6" ChAS 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 KIR3DL1 - - "106031(46|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 45 - 0 "106031(129|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400247CL male - FYVR80369 4 69435889 69541895 106007 Loss 1 0.950689 51 2120 chas 47.24 Loss 50.42 Loss 48.84 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106007(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106007(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401448BJ male "research_filter, clinical_filter" SNEF27582 4 69435889 69541894 106006 Gain 3 0.907573 50 2163 chas 47.24 Gain 47.19 Gain 0 - GainGain- 44 47.25 Gain IP6 "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" TCSA61368 4 69435889 69541894 106006 Loss 0 0.946847 50 2163 chas 99.99 Loss 46.3 Loss 46.31 Loss LossLossLoss 44 50.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" RBBO63662 4 69435889 69541894 106006 Gain 3 0.876787 50 2163 chas 47.24 Gain 46.3 Gain 0 - GainGain- 44 80.66 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401105WS male "research_filter, clinical_filter" GZBA26596 4 69435889 69541894 106006 Loss 0 0.944942 50 2163 chas 99.99 Loss 53.24 Loss 46.31 Loss LossLossLoss 44 47.25 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400150SS female "research_filter, clinical_filter" QXAY99372 4 69435889 69541894 106006 Gain 3 0.88117 50 2163 chas 47.24 Gain 46.3 Gain 0 - GainGain- 44 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_no 400040CN male "research_filter, clinical_filter" GBQV50998 4 69435889 69541894 106006 Gain 3 0.875122 50 2163 chas 47.24 Gain 50.5 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401818PC male "research_filter, clinical_filter" ERKP22336 4 69435889 69541894 106006 Loss 0 0.939953 50 2163 chas 47.24 Loss 31.72 Loss 53.56 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" MVJH83535 4 69435889 69541894 106006 Gain 3 0.884145 50 2163 chas 47.24 Gain 48.83 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401771OS male "research_filter, clinical_filter" YPPO84595 4 69435889 69541894 106006 Gain 3 0.889915 50 2163 chas 47.24 Gain 48.83 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" FXTM73808 4 69435889 69541894 106006 Gain 3 0.902181 50 2163 chas 0 - 26.67 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "106006(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 47 44 - 0 "106006(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_no algo_yes NA 401030GI female "research_filter, clinical_filter" KEHV72339 Y 25501750 25607571 105822 Gain 2 0.847574 124 860 chas 28.36 Gain 0 - 0 - Gain-- 42 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "105822#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "105822(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 42 - 0 "105822(6|McCarroll(2008),Durbin(2010),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" IJCV29609 1 248688587 248794396 105810 Loss 1 0.896648 56 1923 chas 38.94 Loss 38.75 Loss 43.67 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "105810(2|Kidd(2008),Ahn(2009))" "105810(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "105810(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" RIAA15120 1 248688587 248794396 105810 Loss 1 0.899235 56 1923 chas 38.94 Loss 43.67 Loss 43.67 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "105810(2|Kidd(2008),Ahn(2009))" "105810(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "105810(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" MKDG25249 1 248688587 248794396 105810 Loss 1 0.892075 56 1923 chas 38.94 Loss 34.17 Loss 43.67 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "105810(2|Kidd(2008),Ahn(2009))" "105810(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "105810(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401420PJ male "research_filter, clinical_filter" PCGN60952 1 248688587 248794396 105810 Loss 1 0.901976 56 1923 chas 38.94 Loss 43.67 Loss 43.67 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "105810(2|Kidd(2008),Ahn(2009))" "105810(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "105810(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401364GM male "research_filter, clinical_filter" IAQN76409 1 248688587 248794396 105810 Loss 1 0.891134 56 1923 chas 38.94 Loss 35.17 Loss 43.67 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T34,OR2T29" 4 "OR2T10,OR2T11,OR2T34,OR2T29" 4 - - "105810(2|Kidd(2008),Ahn(2009))" "105810(29|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008),Mills(2006))" 1426(2|Perry(2008)) 56 40 - 0 "105810(77|Sebat(2004),Redon(2006),Teague(2010),Campbell(2011),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Alkan(2009),Cooper(2008),Perry(2008b),Wheeler(2008),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" AFNK41813 10 46981282 47087030 105749 Loss 1 0.862164 135 789 chas 100 Loss 0 - 38.97 Loss Loss-Loss 104 100 Loss GTC "ChAS,IPN,PTK" 10q11.22 - "GPRIN2,PPYR1" 2 "GPRIN2,PPYR1" 2 - - "52954(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "105749(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" 578(1|Park(2010)) - 104 - 0 "105749(215|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401054VM female "research_filter, clinical_filter" FPHR45460 7 85629369 85735013 105645 Loss 1 0.912318 64 1676 chas 96.84 Loss 97.19 Loss 99.52 Loss LossLossLoss 54 96.85 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q21.11 - - 0 - 0 - - - - - - 54 - 0 "25163(3|Shaikh(2009),Durbin(2010),Perry(2008b))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" NZSQ74406 22 32358539 32464176 105638 Gain 3 0.907563 129 825 chas 88.31 Gain 99.12 Gain 99.85 Gain GainGainGain 57 99.57 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q12.3 - SLC5A1 1 SLC5A1 1 SLC5A1 - - "2764(3|Conrad(2009),McKernan(2009),Bentley(2008))" - - 57 - 0 "69948(13|Conrad(2009),Wong(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" AWAR79338 6 120344259 120449765 105507 Loss 1 0.918846 80 1335 chas 89.15 Loss 93.59 Loss 99 Loss LossLossLoss 67 97.45 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q22.31 - - 0 - 0 - - - 1545(1|McKernan(2009)) - - 67 - 0 "63598(9|Itsara(2009),Kidd(2008),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" JAVP94180 8 71557604 71663110 105507 Gain 4 0.920886 94 1134 chas 98 Gain 98.68 Gain 98.68 Gain GainGainGain 45 NA NA NA "ChAS,IPN,NXS,PTK" 8q13.3 - "LACTB2,XKR9,LOC286190" 3 "LACTB2,XKR9,LOC286190" 3 - - - "5217(6|Pang(2010),Conrad(2009),Wheeler(2008),McKernan(2009),Bentley(2008))" "472(2|Wheeler(2008),Bentley(2008))" - 45 - 0 "15750(34|Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" VUCC31552 3 162521297 162626676 105380 Gain 4 0.932042 12 9580 chas 18.2 Gain 92.87 Gain 0 - GainGain- 66 99.92 Gain "GTC,IP6" "ChAS,IPN,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400109LJ male research_filter REUG17486 3 162521297 162626676 105380 Loss 1 0.893711 12 9580 chas 18.2 Loss 0 - 0 - Loss-- 66 NA NA NA "ChAS,IPN" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401576WC female research_filter QVQY90814 3 162521297 162626676 105380 Loss 1 0.897196 12 9580 chas 18.2 Loss 0 - 0 - Loss-- 66 NA NA NA "ChAS,IPN" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401311GL female research_filter KGUZ66103 3 162521297 162626676 105380 Gain 4 0.931188 12 9580 chas 18.2 Gain 100 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401596PJ male research_filter JPEZ22320 3 162521297 162626676 105380 Gain 4 0.933571 12 9580 chas 18.2 Gain 50.73 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401149VA male research_filter USNP20353 3 162521297 162626676 105380 Gain 4 0.927586 12 9580 chas 0 - 21.55 Gain 0 - -Gain- 66 97.36 Gain "GTC,IP6" "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400082SD female research_filter PYXL51166 3 162521297 162626676 105380 Gain 4 0.931431 12 9580 chas 0 - 50.73 Gain 0 - -Gain- 66 99.35 Gain IP6 "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401146US female research_filter KLXQ40405 3 162521297 162626676 105380 Gain 4 0.932939 12 9580 chas 0 - 77.12 Gain 0 - -Gain- 66 11.27 Gain "GTC,IP6" "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400051MR_1 male research_filter CLWS25417 3 162521297 162626676 105380 Gain 4 0.921805 12 9580 chas 0 - 55.41 Gain 0 - -Gain- 66 99.34 Gain GTC "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401661HD male research_filter TTBC76525 3 162521297 162626676 105380 Gain 4 0.937146 12 9580 chas 0 - 89.84 Gain 0 - -Gain- 66 89.78 Gain GTC "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400371GA female research_filter AQKH94698 3 162521297 162626676 105380 Gain 4 0.93182 12 9580 chas 0 - 21.55 Gain 0 - -Gain- 66 99.92 Gain "GTC,IP6" "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400955BE male research_filter AYLS39762 3 162521297 162626676 105380 Gain 4 0.930579 12 9580 chas 0 - 21.55 Gain 0 - -Gain- 66 99.92 Gain "GTC,IP6" "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400663MD female research_filter RBTV68848 3 162521297 162626676 105380 Gain 4 0.93508 12 9580 chas 0 - 50.73 Gain 0 - -Gain- 66 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401182OC male research_filter IORF34772 3 162521297 162626676 105380 Loss 1 0.909496 12 9580 chas 0 - 21.55 Loss 0 - -Loss- 66 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400261RN female research_filter DMKI43381 3 162521297 162626676 105380 Gain 4 0.934785 12 9580 chas 0 - 50.73 Gain 0 - -Gain- 66 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400763BT female research_filter UCFR59681 3 162521297 162626676 105380 Gain 4 0.926887 12 9580 chas 0 - 0 - 0 - --- 66 84.56 Gain "GTC,IP6" ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400319HT male - SKLJ58672 3 162521297 162626676 105380 Loss 1 0.909405 12 9580 chas 0 - 0 - 0 - --- 66 99.93 Loss "BS,GTC,IP6" ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400639RP male - MWRB65708 3 162521297 162626676 105380 Gain 4 0.933678 12 9580 chas 0 - 0 - 0 - --- 66 18.21 Gain "GTC,IP6" ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400267GD female - BYSK29073 3 162521297 162626676 105380 Loss 1 0.890271 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400620MT male - RTCT86718 3 162521297 162626676 105380 Loss 1 0.908958 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400201PK male - XSMN99460 3 162521297 162626676 105380 Loss 1 0.909938 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401235IA male - KWYE93203 3 162521297 162626676 105380 Loss 1 0.894479 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401357MH male - PRED73338 3 162521297 162626676 105380 Loss 1 0.890558 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401183HP female - ACWT82545 3 162521297 162626676 105380 Loss 1 0.899545 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401477ST male - FGIX67905 3 162521297 162626676 105380 Loss 1 0.897289 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401391PJ male - OULL87238 3 162521297 162626676 105380 Loss 1 0.907188 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401845MJ male - EZOV24426 3 162521297 162626676 105380 Loss 1 0.897057 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400454RE male - UJRA83281 3 162521297 162626676 105380 Loss 1 0.897324 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401361GG male - TRLD69151 3 162521297 162626676 105380 Loss 1 0.903606 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401514BA male - IDTW13637 3 162521297 162626676 105380 Loss 1 0.886844 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401687LR male - GNZH35610 3 162521297 162626676 105380 Loss 1 0.89512 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 402029KJ male - FVSF76751 3 162521297 162626676 105380 Loss 1 0.90479 12 9580 chas 0 - 0 - 0 - --- 66 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "105380(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 66 - 0 "105380(268|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401869BG male - QVQY90814 12 19475060 19580414 105355 Gain 3 0.886715 86 1239 chas 54.18 Gain 58.69 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "105355(6|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 51 - 0 "105355(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401311GL female "research_filter, clinical_filter" FSLR52955 4 69436623 69541963 105341 Loss 0 0.935537 44 2449 chas 46.85 Loss 50.04 Loss 45.9 Loss LossLossLoss 40 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "105341(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 39 - 0 "105341(313|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" TAVH54072 17 44187492 44292742 105251 Gain 3 0.898618 107 992 chas 24.08 Gain 76.27 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105251(1|Kidd(2008)) "105251(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105251(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400948EV female "research_filter, clinical_filter" XOQW96687 17 44187492 44292742 105251 Gain 3 0.890895 107 992 chas 24.08 Gain 76.27 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105251(1|Kidd(2008)) "105251(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105251(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" BWCN37814 17 44187492 44292742 105251 Gain 3 0.907305 107 992 chas 95.93 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105251(1|Kidd(2008)) "105251(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105251(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401966SR male "research_filter, clinical_filter" XZCA75295 17 44187492 44292742 105251 Gain 3 0.905345 107 992 chas 22.92 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105251(1|Kidd(2008)) "105251(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105251(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400033KC female "research_filter, clinical_filter" RDBP35321 2 49713114 49818310 105197 Gain 3 0.891875 52 2062 chas 25.35 Gain 100 Gain 0 - GainGain- 48 NA NA NA "ChAS,IPN,NXS" 2p16.3 - - 0 - 0 - - - - "993(2|Levy(2007),McKernan(2009))" - 48 - 0 "63009(7|Itsara(2009),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" OWBB95825 17 44187492 44292676 105185 Gain 3 0.910225 106 1001 chas 59.08 Gain 99.57 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401275SJ male "research_filter, clinical_filter" TBRP43796 17 44187492 44292676 105185 Gain 3 0.908498 106 1001 chas 59.08 Gain 25.59 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401894PD male "research_filter, clinical_filter" XOPW74186 17 44187492 44292676 105185 Gain 3 0.918525 106 1001 chas 51.77 Gain 100 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" HQWW55061 17 44187492 44292676 105185 Gain 3 0.90236 106 1001 chas 23.32 Gain 80.11 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" CVRD94421 17 44187492 44292676 105185 Gain 3 0.912992 106 1001 chas 59.08 Gain 100 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400586RD male "research_filter, clinical_filter" VHVH83554 17 44187492 44292676 105185 Gain 3 0.90549 106 1001 chas 59.08 Gain 56.11 Gain 100 Gain GainGainGain 99 100 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" HBRB11217 17 44187492 44292676 105185 Gain 3 0.919772 106 1001 chas 62.56 Gain 100 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400302HW male "research_filter, clinical_filter" DUEF32956 17 44187492 44292676 105185 Gain 3 0.904846 106 1001 chas 99.22 Gain 100 Gain 100 Gain GainGainGain 99 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401190WC male "research_filter, clinical_filter" SLNP19984 17 44187492 44292676 105185 Gain 3 0.909672 106 1001 chas 67.47 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" VOAZ29383 17 44187492 44292676 105185 Gain 4 0.942179 106 1001 chas 69.87 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400834SS female "research_filter, clinical_filter" ZYKC24489 17 44187492 44292676 105185 Gain 3 0.900327 106 1001 chas 23.32 Gain 25.59 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" RIQO94770 17 44187492 44292676 105185 Gain 3 0.898106 106 1001 chas 23.9 Gain 96.05 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 402062KR female "research_filter, clinical_filter" UEDI98118 17 44187492 44292676 105185 Gain 3 0.901566 106 1001 chas 23.9 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" DCUN59806 17 44187492 44292676 105185 Gain 3 0.896737 106 1001 chas 23.9 Gain 79.24 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" XZZR64566 17 44187492 44292676 105185 Gain 3 0.900841 106 1001 chas 95.99 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400996MC male "research_filter, clinical_filter" GNMX63810 17 44187492 44292676 105185 Gain 3 0.896069 106 1001 chas 95.99 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" ZKED26020 17 44187492 44292676 105185 Gain 3 0.898663 106 1001 chas 22.93 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" IENJ56420 17 44187492 44292676 105185 Gain 3 0.892807 106 1001 chas 23.9 Gain 95.98 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401538NS female "research_filter, clinical_filter" QEPL68818 17 44187492 44292676 105185 Gain 3 0.897017 106 1001 chas 99.22 Gain 100 Gain 100 Gain GainGainGain 99 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 105185(1|Kidd(2008)) "105185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 99 - 0 "105185(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 402028BD male "research_filter, clinical_filter" RAQB29487 19 416231 521269 105039 Gain 3 0.912614 40 2693 chas 28.45 Gain 30.56 Gain 0 - GainGain- 34 NA NA NA "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "105039(21|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 33 - 0 "105039(103|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401746WW male research_filter WMCV84375 X 120009892 120114894 105003 Loss 1 0.857058 48 2234 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "105003(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "105003(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 401249TP female clinical_filter YMWQ49708 X 120009897 120114894 104998 Gain 2 0.877116 43 2499 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104998(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104998(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401403TD male - UCQK65306 X 120009897 120114894 104998 Gain 2 0.865501 43 2499 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104998(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104998(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401196CR male - TLUO25428 X 120009900 120114894 104995 Loss 1 0.88574 40 2692 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 401836SI female clinical_filter UVWE33125 X 120009900 120114894 104995 Gain 2 0.877324 40 2692 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401423BA male - XPRZ52054 X 120009900 120114894 104995 Gain 2 0.873037 40 2692 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400611GG male - UOXQ52793 X 120009900 120114894 104995 Gain 3 0.894316 40 2692 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400791GC female - QMDZ51984 X 120009900 120114894 104995 Gain 2 0.880216 40 2692 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401979TB male - JPEZ22320 X 120009900 120114894 104995 Gain 2 0.884807 40 2692 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104995(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104995(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401149VA male - YEVU55281 X 120009901 120114894 104994 Gain 2 0.86064 39 2763 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "104994(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 52 0 - 0 "104994(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401453OL male - HOIC14625 4 40665664 40770619 104956 Gain 3 0.909127 70 1521 chas 85.89 Gain 89.69 Gain 89.69 Gain GainGainGain 60 85.53 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4p14 - NSUN7 1 NSUN7 1 - - - "16727(2|Perry(2008),Mills(2006))" - - 60 - 0 "104956(15|Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" NLWZ33045 7 38286515 38391352 104838 Gain 3 0.871351 110 961 chas 0 - 37.26 Gain 0 - -Gain- 126 NA NA NA "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "104838(33|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 126 - 0 "104838(100|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401993HM female "research_filter, clinical_filter" DSDE67128 13 77952123 78056950 104828 Gain 3 0.891732 74 1436 chas 54.69 Gain 94.82 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 13q22.3 - - 0 - 0 - - - "8704(2|Matsuzaki(2009),Mills(2006))" - - 67 - 0 "37451(7|Kidd(2008),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401125LM female "research_filter, clinical_filter" FCXX78522 17 44187492 44292319 104828 Gain 3 0.904894 105 1007 chas 62.77 Gain 100 Gain 100 Gain GainGainGain 98 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 104828(1|Kidd(2008)) "104828(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 98 - 0 "104828(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" HARD47518 17 44187492 44292319 104828 Gain 3 0.894904 105 1007 chas 23.4 Gain 63.84 Gain 100 Gain GainGainGain 98 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 104828(1|Kidd(2008)) "104828(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 98 - 0 "104828(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" RSYQ67471 15 43929338 44033981 104644 Loss 1 0.872405 52 2051 chas 9.05 Loss 9.14 Loss 0 - LossLoss- 25 90.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 15q15.3 - "CKMT1A,CATSPER2,CATSPER2P1" 3 "CKMT1A,CATSPER2,CATSPER2P1" 3 - - - "104644(16|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 25 - 0 "104644(40|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400624RJ male "research_filter, clinical_filter" KWYE93203 Y 28124832 28229371 104540 Gain 2 0.849378 130 810 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS Yq11.23 - - 0 - 0 - - - "87684(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 17 - 0 "104540(5|Locke(2006),McCarroll(2008),Perry(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_no algo_no NA 401357MH male clinical_filter TUWR15724 4 69435889 69540420 104532 Gain 3 0.8782 48 2224 chas 47.91 Gain 49.52 Gain 0 - GainGain- 44 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_no 401207DA male research_filter JJLS74641 4 69435889 69540420 104532 Gain 3 0.885166 48 2224 chas 47.91 Gain 51.21 Gain 0 - GainGain- 44 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_no 400929MM male research_filter OWBB95825 4 69435889 69540420 104532 Gain 3 0.88791 48 2224 chas 47.91 Gain 46.96 Gain 46.96 Gain GainGainGain 44 47.92 Gain IP6 "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401275SJ male research_filter XBDZ94110 4 69435889 69540420 104532 Gain 3 0.892439 48 2224 chas 99.99 Gain 49.52 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400649PS male research_filter BHQW11777 4 69435889 69540420 104532 Gain 3 0.881861 48 2224 chas 99.99 Gain 49.52 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401027KW male research_filter SXXB40252 4 69435889 69540420 104532 Gain 3 0.883391 48 2224 chas 99.99 Gain 46.06 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401495NR male research_filter UAVX81306 4 69435889 69540420 104532 Gain 3 0.884867 48 2224 chas 99.99 Gain 46.13 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400643LD male research_filter TZAD89276 4 69435889 69540420 104532 Gain 3 0.884007 48 2224 chas 0 - 51.21 Gain 0 - -Gain- 44 0 - - "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 401185LE female research_filter HDQN23240 4 69435889 69540420 104532 Gain 3 0.899799 48 2224 chas 0 - 51.21 Gain 0 - -Gain- 44 47.91 Gain GTC "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400136DM female research_filter CWFZ39975 4 69435889 69540420 104532 Gain 3 0.89094 48 2224 chas 0 - 51.21 Gain 0 - -Gain- 44 47.92 Gain IP6 "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400598DA female research_filter IELV11932 4 69435889 69540420 104532 Gain 3 0.885682 48 2224 chas 0 - 47.85 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400869BK female research_filter XGQH24350 4 69435889 69540420 104532 Gain 3 0.872534 48 2224 chas 0 - 51.21 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401215MJ female research_filter ORMZ25698 4 69435889 69540420 104532 Gain 3 0.882039 48 2224 chas 0 - 51.21 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400600DP female research_filter EIKI77114 4 69435889 69540420 104532 Gain 3 0.879694 48 2224 chas 0 - 53.99 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "104532(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 44 - 0 "104532(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401221LD female research_filter WKJP80388 22 19764898 19869406 104509 Loss 1 0.920219 356 294 chas 96.35 Loss 99.99 Loss 99.99 Loss LossLossLoss 101 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "GNB1L,TBX1,TXNRD2,C22orf29" 4 "GNB1L,TBX1,TXNRD2,C22orf29" 4 TBX1 "104509#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "104509(10|Jakobsson(2008),Perry(2008),Park(2010),Pinto(2007),McCarroll(2005),Shaikh(2009))" 1165(2|Park(2010)) - 101 TBX1#asd_known 1 "104509(22|Korbel(2007),Jakobsson(2008),Park(2010),Wong(2007),Pinto(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400320RN male "research_filter, clinical_filter" TMXA54308 14 22840003 22944507 104505 Loss 1 0.847685 145 725 chas 0 - 0 - 0 - --- 86 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "104505(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 86 - 0 "104505(94|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400478WE female clinical_filter TQFG68171 16 6874577 6978977 104401 Loss 1 0.930891 260 403 chas 99.93 Loss 99.9 Loss 99.9 Loss LossLossLoss 124 99.81 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - "104401(6|Itsara(2009),Pang(2010),Jakobsson(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 561(1|Pang(2010)) - 124 - 0 "104401(22|Jakobsson(2008),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" GTRU40344 7 7498644 7603027 104384 Loss 1 0.918403 98 1076 chas 97.9 Loss 98.96 Loss 98.96 Loss LossLossLoss 63 97.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.3 - COL28A1 1 COL28A1 1 - - - "104384(2|McKernan(2009),Pinto(2007))" "300(2|Bentley(2008),Mills(2006))" - 63 - 0 "30244(33|Perry(2008),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400134WK_1 male "research_filter, clinical_filter" RTCT86718 3 26717503 26821884 104382 Gain 3 0.910334 102 1033 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 83 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.1 - LRRC3B 1 LRRC3B 1 - - - 2284(1|Conrad(2009)) "396(2|McKernan(2009),Bentley(2008))" - 83 - 0 "31325(16|Pinto(2011),Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" IUXY17884 12 80116407 80220669 104263 Gain 3 0.888941 72 1468 chas 86.68 Gain 100 Gain 0 - GainGain- 38 NA NA NA "ChAS,IPN,NXS" 12q21.2 - PPP1R12A 1 PPP1R12A 1 - - - "47513(10|Wang(2007),Ju(2010),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Tuzun(2005),Park(2010),Kim(2009))" - - 38 - 0 "87255(56|Conrad(2009),Perry(2008),Ju(2010),Wang(2007),Durbin(2010),De(Smith_2007),Park(2010),Tuzun(2005),Pinto(2011),Kim(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401238QR male "research_filter, clinical_filter" IORF34772 22 42838689 42942949 104261 Gain 3 0.884113 64 1654 chas 91.04 Gain 35.2 Gain 0 - GainGain- 58 NA NA NA "ChAS,IPN,NXS" 22q13.2 - "RRP7A,SERHL" 2 "RRP7A,SERHL" 2 - - - "104261(19|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "1489(6|Wheeler(2008),Matsuzaki(2009),Perry(2008))" 45 58 - 0 "104261(91|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" YMNO36133 2 41147549 41251711 104163 Loss 1 0.923761 82 1285 chas 79.97 Loss 81.45 Loss 81.45 Loss LossLossLoss 111 87.2 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p22.1 - - 0 - 0 - - - "36478(36|Wang(2007),Ahn(2009),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),McCarroll(2008),Park(2010),McCarroll(2005),Shaikh(2009))" 184(1|Ahn(2009)) - 111 - 0 "104163(103|Conrad(2009),Ahn(2009),Jakobsson(2008),Perry(2008),Teague(2010),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),De(Smith_2007),Park(2010),McCarroll(2008),Wang(2007),Campbell(2011),Pinto(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" YBMF74034 7 9128802 9232928 104127 Loss 1 0.898742 76 1388 chas 81.57 Loss 72.84 Loss 98.68 Loss LossLossLoss 87 97.08 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.3 - - 0 - 0 - - - "104127(7|Wang(2007),Redon(2006),Perry(2008),McKernan(2009),Pinto(2007),McCarroll(2008))" - - 87 - 0 "104127(18|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2007),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" AYLS39762 14 22837283 22941375 104093 Loss 1 0.850262 140 748 chas 0 - 0 - 0 - --- 75 0 - - ChAS 14q11.2 - - 0 - 0 - - - "104093(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 75 - 0 "104093(89|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400663MD female clinical_filter AWAR79338 17 36300466 36404555 104090 Loss 1 0.870946 29 3717 chas 0 - 0 - 0 - --- 2 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "104090(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "104090(123|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400859SC male clinical_filter NZSQ74406 10 17938195 18042017 103823 Loss 1 0.889897 11 10382 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) "MRC1,TMEM236" 2 "MRC1,TMEM236" 2 - - - - - 52 6 - 0 "103823(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400191MP_1 male - XNQF62194 13 64301591 64405309 103719 Gain 3 0.881848 73 1440 chas 40.31 Gain 83.43 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 29423(1|Kidd(2008)) "103719(8|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 80 64 - 0 "103719(13|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401690HA male "research_filter, clinical_filter" DQHB62647 13 64301591 64405309 103719 Loss 1 0.895254 73 1440 chas 91.31 Loss 90.25 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 29423(1|Kidd(2008)) "103719(8|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 80 64 - 0 "103719(13|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401732HW male "research_filter, clinical_filter" AXWL27269 17 36300466 36404136 103671 Loss 1 0.867605 27 3987 chas 0 - 99.91 Loss 0 - -Loss- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "103671(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "103671(123|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 401962BK female "research_filter, clinical_filter" EJVQ96131 13 95934663 96038320 103658 Gain 3 0.890856 80 1312 chas 24.46 Gain 30.68 Gain 0 - GainGain- 80 NA NA NA "ChAS,IPN,NXS" 13q32.1 - ABCC4 1 ABCC4 1 - - - "78157(10|Conrad(2009),Matsuzaki(2009),McKernan(2009),Kidd(2008),Park(2010),Shaikh(2009))" 1190(2|Matsuzaki(2009)) - 80 - 0 "103658(33|Conrad(2009),Jakobsson(2008),Pinto(2011),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400738WM female "research_filter, clinical_filter" LLRB50237 4 90854554 90958046 103493 Loss 1 0.937292 71 1478 chas 94.71 Loss 97.17 Loss 97.17 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 4q22.1 - MMRN1 1 MMRN1 1 - - - "91228(2|Jakobsson(2008),Shaikh(2009))" - - 56 - 0 "103493(8|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" ERKP22336 19 20617244 20720705 103462 Loss 1 0.900512 66 1591 chas 95.83 Loss 100 Loss 100 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 19p12 - - 0 - 0 - - - "103462(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Itsara(2009),Shaikh(2009))" - 2 64 - 0 "103462(299|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Wang(2007),Campbell(2011),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Park(2010),Pinto(2011),Jakobsson(2008),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401726LW female "research_filter, clinical_filter" IAEL45337 14 22840169 22943573 103405 Loss 1 0.858267 140 743 chas 0 - 0 - 0 - --- 81 100 Loss "BS,GTC" ChAS 14q11.2 - - 0 - 0 - - - "103405(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 81 - 0 "103405(92|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400424LN female clinical_filter NSQR79941 15 24374845 24478173 103329 Loss 1 0.882214 76 1377 chas 98.84 Loss 19.93 Loss 98.85 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - PWRN2 1 PWRN2 1 - "103329#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "103329(43|Wang(2007),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 98 67 - 0 "103329(78|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),Korbel(2007),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401077VC female "research_filter, clinical_filter" KNEY83753 11 97614288 97717608 103321 Loss 1 0.913467 64 1640 chas 82.93 Loss 91.46 Loss 91.46 Loss LossLossLoss 78 NA NA NA "ChAS,IPN,NXS,PTK" 11q22.1 - - 0 - 0 - - - "103321(3|Jakobsson(2008),Pinto(2007),Redon(2006))" - - 78 - 0 "103321(9|Itsara(2009),Redon(2006),Wong(2007),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400411TG male "research_filter, clinical_filter" RLVK87046 2 110876877 110980108 103232 Gain 3 0.897104 108 964 chas 97.4 Gain 100 Gain 100 Gain GainGainGain 49 NA NA NA "ChAS,IPN,NXS,PTK" 2q13 - "LINC00116,NPHP1" 2 "LINC00116,NPHP1" 2 NPHP1 - - "103232(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Gusev(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 2 49 NPHP1#id_known 1 "103232(35|Teague(2010),Wong(2007),Jakobsson(2008),Wang(2007),Itsara(2009),Durbin(2010),Gusev(2009),Pinto(2007),Pinto(2011),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401563TK male "research_filter, clinical_filter" KKFR54086 8 125868699 125971916 103218 Gain 3 0.912739 104 1002 chas 99.92 Gain 99.97 Gain 100 Gain GainGainGain 97 NA NA NA "ChAS,IPN,NXS,PTK" 8q24.13 - LOC157381 1 LOC157381 1 - - - - 1(1|Levy(2007)) - 96 - 0 "15434(8|Teague(2010),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401443JK male "research_filter, clinical_filter" GTDY31038 2 133871422 133974590 103169 Loss 1 0.920021 116 897 chas 99.91 Loss 99.9 Loss 100 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 2q21.2 - NCKAP5 1 NCKAP5 1 - - - 1493(1|McKernan(2009)) "664(4|Wang(2008),Pang(2010),Ahn(2009),Bentley(2008))" - 75 - 0 "103169(28|Ahn(2009),Wong(2007),Jakobsson(2008),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" FNEG58263 15 102030796 102133924 103129 Gain 3 0.886688 316 327 chas 95.87 Gain 95.88 Gain 100 Gain GainGainGain 84 95.74 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - - 0 - 0 - "103129#1%""15q26 overgrowth syndrome"":3163423" - "103129(7|Conrad(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - 2 84 - 0 "103129(25|Conrad(2009),Jakobsson(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400836LK male "research_filter, clinical_filter" TGWW40273 15 102030796 102133924 103129 Gain 3 0.8855 316 327 chas 92.11 Gain 100 Gain 100 Gain GainGainGain 84 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - - 0 - 0 - "103129#1%""15q26 overgrowth syndrome"":3163423" - "103129(7|Conrad(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - 2 84 - 0 "103129(25|Conrad(2009),Jakobsson(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400140WM female "research_filter, clinical_filter" XHZD61935 15 102030796 102133924 103129 Gain 3 0.888131 316 327 chas 70.37 Gain 96.03 Gain 100 Gain GainGainGain 84 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - - 0 - 0 - "103129#1%""15q26 overgrowth syndrome"":3163423" - "103129(7|Conrad(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - 2 84 - 0 "103129(25|Conrad(2009),Jakobsson(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" JGYN82468 18 7620576 7723670 103095 Loss 1 0.918615 100 1041 chas 99.99 Loss 99.67 Loss 99.99 Loss LossLossLoss 58 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.23 - PTPRM 1 - 0 - - - - 171(1|Levy(2007)) - 58 - 0 "103095(4|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" MTRE48443 10 48117190 48220168 102979 Loss 1 0.890395 11 10297 chas 0 - 0 - 0 - --- 2 0 - - ChAS 10q11.22 - "AGAP9,LOC642826,CTSL1P2" 3 "AGAP9,LOC642826,CTSL1P2" 3 - - - "102979(17|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 2 - 0 "102979(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400378HL female - AUMQ17072 10 48117190 48220168 102979 Loss 1 0.918327 11 10297 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 10q11.22 - "AGAP9,LOC642826,CTSL1P2" 3 "AGAP9,LOC642826,CTSL1P2" 3 - - - "102979(17|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 2 - 0 "102979(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401856GC male - YBMF74034 5 177157387 177260317 102931 Gain 3 0.898411 22 4901 chas 0 - 0 - 0 - --- 10 0 - - ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "102931#1%""Sotos syndrome"":2326144" - "102743(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 10 - 0 "102931(39|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401806DL male - UEII10946 17 36307773 36410559 102787 Gain 3 0.91124 29 3670 chas 0 - 45.72 Gain 0 - -Gain- 3 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "102787(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 3 - 0 "102787(116|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401913GT male research_filter APBT44417 3 162524824 162627475 102652 Loss 1 0.913054 12 9332 chas 15.26 Loss 93.83 Loss 98.17 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "102652(32|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "102652(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400701MM female research_filter XIWN71249 9 11988678 12091322 102645 Loss 1 0.893885 68 1532 chas 89.05 Loss 94.52 Loss 94.52 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "102645(31|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 82 - 0 "102645(47|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401935TM female "research_filter, clinical_filter" ZRXE40373 3 164696499 164799079 102581 Gain 3 0.899275 132 783 chas 92.3 Gain 96.16 Gain 96.16 Gain GainGainGain 49 92.15 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - SI 1 SI 1 SI - - 1490(1|McKernan(2009)) - - 49 - 0 "102581(7|McKernan(2009),Wong(2007),Shaikh(2009),Durbin(2010),Perry(2008b))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" PQCI84759 14 22688402 22790982 102581 Loss 1 0.848994 172 599 chas 0 - 0 - 0 - --- 97 0 - - ChAS 14q11.2 - - 0 - 0 - - - "102581(10|Sebat(2004),Perry(2008),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 97 - 0 "102581(57|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400076LC female clinical_filter PRED73338 2 233209460 233311912 102453 Gain 3 0.902072 71 1463 chas 15.31 Gain 97.53 Gain 0 - GainGain- 91 NA NA NA "ChAS,IPN,NXS" 2q37.1 - "ECEL1P2,ALPP,ALPPL2" 3 "ECEL1P2,ALPP,ALPPL2" 3 - - - "102453(9|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Park(2010),Pinto(2007),McCarroll(2005),Shaikh(2009))" - 28 91 - 0 "102453(43|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Schuster(2010),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" MTFT89424 3 100340055 100442497 102443 Gain 3 0.901418 108 957 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 62 99.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400949AM male "research_filter, clinical_filter" HAGL80690 3 100340055 100442497 102443 Gain 3 0.899539 108 957 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 62 99.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" QMSH77829 3 100340055 100442497 102443 Gain 3 0.903982 108 957 chas 92.61 Gain 100 Gain 100 Gain GainGainGain 62 85.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400038CK male "research_filter, clinical_filter" UYAI76550 3 100340055 100442497 102443 Gain 3 0.900641 108 957 chas 99.99 Gain 100 Gain 100 Gain GainGainGain 62 85.79 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" XGGI83581 3 100340055 100442497 102443 Gain 3 0.88871 108 957 chas 66.84 Gain 93.93 Gain 100 Gain GainGainGain 62 99.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400486LS female "research_filter, clinical_filter" UEDI98118 3 100340055 100442497 102443 Gain 3 0.893355 108 957 chas 99.52 Gain 99.1 Gain 100 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" TZSA84286 3 100340055 100442497 102443 Gain 4 0.949879 108 957 chas 99.52 Gain 100 Gain 100 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401166WJ female "research_filter, clinical_filter" FDGT59945 3 100340055 100442497 102443 Gain 3 0.88897 108 957 chas 63.54 Gain 99.99 Gain 99.1 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102443(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102443(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401475MK male "research_filter, clinical_filter" UPRR75789 3 100340055 100442496 102442 Gain 3 0.897039 107 966 chas 0 - 100 Gain 100 Gain #NAME? 61 NA NA NA "ChAS,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102442(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 61 - 0 "102442(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400889CM female "research_filter, clinical_filter" TMXA54308 6 31353689 31456073 102385 Loss 1 0.921023 110 939 chas 89.38 Loss 94.62 Loss 94.61 Loss LossLossLoss 100 NA NA NA "ChAS,IPN,NXS,PTK" 6p21.33 - "HCP5,HCG26,MICA" 3 "HCP5,HCG26,MICA" 3 - - - "102385(63|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "99543(16|Wang(2008),Levy(2007),Matsuzaki(2009))" 32 100 - 0 "102385(170|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" OULL87238 6 31353689 31456073 102385 Gain 3 0.900179 110 939 chas 13.94 Gain 94.62 Gain 0 - GainGain- 100 NA NA NA "ChAS,IPN,NXS" 6p21.33 - "HCP5,HCG26,MICA" 3 "HCP5,HCG26,MICA" 3 - - - "102385(63|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "99543(16|Wang(2008),Levy(2007),Matsuzaki(2009))" 32 100 - 0 "102385(170|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" NFIQ53983 3 100340055 100442422 102368 Gain 3 0.893652 105 984 chas 99.52 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102368(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 60 - 0 "102368(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401719RL female "research_filter, clinical_filter" KAYE11117 3 100340055 100442422 102368 Gain 3 0.891725 105 984 chas 99.99 Gain 99.98 Gain 99.99 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102368(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 60 - 0 "102368(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400686BM male "research_filter, clinical_filter" SFLX52247 12 19474770 19577135 102366 Gain 3 0.887937 86 1204 chas 99.2 Gain 73.28 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "102366(6|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 52 - 0 "102366(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" ROCO41006 3 100340055 100442328 102274 Gain 3 0.887609 104 992 chas 63.45 Gain 100 Gain 100 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.2 - "TFG,GPR128" 2 "TFG,GPR128" 2 TFG - - "102274(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 930(1|McKernan(2009)) 4 59 - 0 "102274(26|Itsara(2009),McKernan(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" EFCN47469 20 14748547 14850762 102216 Loss 1 0.918563 76 1362 chas 92.55 Loss 90.49 Loss 92.63 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "102216(31|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1(1|Levy(2007)) - 113 - 0 "102216(110|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400483DP male "research_filter, clinical_filter" MGYM61346 X 142299170 142401371 102202 Gain 3 0.91 49 2129 chas 96.28 Gain 0 - 0 - Gain-- 76 96.28 Gain "BS,GTC,IP6" "ChAS,IPN" Xq27.3 - - 0 - 0 - - - - - - 76 - 0 19699(4|Durbin(2010)) FALSE TRUE ipn_yes algo_yes affy6_yes 400974PS female research_filter XTPE89033 3 162524824 162627001 102178 Loss 1 0.914802 11 10217 chas 0 - 96.1 Loss 96.08 Loss #NAME? 64 99.02 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "102178(32|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "102178(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400817MB male research_filter XNUA56302 15 102030796 102132973 102178 Gain 3 0.89479 308 332 chas 44.92 Gain 81.07 Gain 99.56 Gain GainGainGain 83 99.46 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - - 0 - 0 - "102178#1%""15q26 overgrowth syndrome"":3163423" - "102178(7|Conrad(2009),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - 2 83 - 0 "102178(25|Conrad(2009),Jakobsson(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" CAYM40684 12 19475060 19577135 102076 Gain 3 0.888025 84 1229 chas 95.85 Gain 96 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "102076(6|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 51 - 0 "102076(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" VRMG83827 12 19475060 19577135 102076 Gain 3 0.877275 84 1229 chas 60.75 Gain 25.84 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 12p12.3 - PLEKHA5 1 PLEKHA5 1 - - - "102076(6|de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009),Simon-Sanchez(2007))" - - 51 - 0 "102076(22|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401769CR male "research_filter, clinical_filter" VOUF55858 X 2703633 2805662 102030 Gain 2 0.934668 138 744 chas 0 - 0 - 0 - --- 91 100 Gain "GTC,IP6" ChAS Xp22.33 - "XG,GYG2" 2 "XG,GYG2" 2 XG - - "102030(9|Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 913(1|Matsuzaki(2009)) 60 90 - 0 "102030(13|Teague(2010),Redon(2006),Durbin(2010),Pinto(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 400338SR male clinical_filter CVRD94421 X 2703633 2805662 102030 Gain 2 0.935233 138 744 chas 0 - 0 - 0 - --- 91 100 Gain "GTC,IP6" ChAS Xp22.33 - "XG,GYG2" 2 "XG,GYG2" 2 XG - - "102030(9|Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 913(1|Matsuzaki(2009)) 60 90 - 0 "102030(13|Teague(2010),Redon(2006),Durbin(2010),Pinto(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 400586RD male clinical_filter IZZO20602 X 2703633 2805662 102030 Gain 2 0.939775 138 744 chas 0 - 0 - 0 - --- 91 NA NA NA ChAS Xp22.33 - "XG,GYG2" 2 "XG,GYG2" 2 XG - - "102030(9|Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 913(1|Matsuzaki(2009)) 60 90 - 0 "102030(13|Teague(2010),Redon(2006),Durbin(2010),Pinto(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400594VJ male clinical_filter NKHQ61532 3 162524824 162626676 101853 Loss 1 0.909093 10 11317 chas 15.38 Loss 94.57 Loss 96.41 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400588BE female research_filter UKBP75340 3 162524824 162626676 101853 Loss 1 0.909477 10 11317 chas 15.38 Loss 96.41 Loss 96.41 Loss LossLossLoss 64 99.32 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400059SV female research_filter NQBM70678 3 162524824 162626676 101853 Loss 1 0.937909 10 11317 chas 15.38 Loss 96.41 Loss 94.57 Loss LossLossLoss 64 99.32 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400084DM female research_filter ZRAK81940 3 162524824 162626676 101853 Loss 1 0.917543 10 11317 chas 15.38 Loss 89.49 Loss 96.41 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401864CV female research_filter IRJE88693 3 162524824 162626676 101853 Loss 1 0.923181 10 11317 chas 15.38 Loss 26.42 Loss 69.86 Loss LossLossLoss 64 99.3 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female research_filter JFSR33951 3 162524824 162626676 101853 Loss 1 0.92574 10 11317 chas 15.38 Loss 26.42 Loss 94.57 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400444MM female research_filter PQCI84759 3 162524824 162626676 101853 Loss 1 0.913586 10 11317 chas 15.38 Loss 98.16 Loss 98.16 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400076LC female research_filter GAAC71530 3 162524824 162626676 101853 Loss 1 0.908589 10 11317 chas 15.38 Loss 94.57 Loss 94.57 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400506GN female research_filter EUQI28257 3 162524824 162626676 101853 Loss 1 0.909405 10 11317 chas 15.38 Loss 94.57 Loss 98.16 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400920MK female research_filter NCJU46793 3 162524824 162626676 101853 Loss 1 0.904274 10 11317 chas 15.38 Loss 96.41 Loss 96.41 Loss LossLossLoss 64 99.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400061DE female research_filter UOXQ52793 3 162524824 162626676 101853 Loss 1 0.926267 10 11317 chas 15.38 Loss 94.57 Loss 96.41 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400791GC female research_filter OUAW94182 3 162524824 162626676 101853 Loss 1 0.924512 10 11317 chas 15.38 Loss 49.02 Loss 96.41 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402063WM female research_filter DZXX36994 3 162524824 162626676 101853 Loss 1 0.913969 10 11317 chas 15.38 Loss 98.16 Loss 98.16 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401005BL female research_filter XQAG43010 3 162524824 162626676 101853 Loss 1 0.921916 10 11317 chas 15.38 Loss 96.41 Loss 94.57 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400953MR female research_filter ZBJH32901 3 162524824 162626676 101853 Loss 1 0.939719 10 11317 chas 15.38 Loss 96.41 Loss 94.57 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401900RJ female research_filter PRPG47770 3 162524824 162626676 101853 Loss 1 0.942409 10 11317 chas 15.38 Loss 100 Loss 98.16 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401695BT female research_filter ZKED26020 3 162524824 162626676 101853 Loss 1 0.93959 10 11317 chas 15.38 Loss 51.44 Loss 94.57 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401652HL female research_filter CHNV74218 3 162524824 162626676 101853 Loss 1 0.926697 10 11317 chas 15.38 Loss 96.41 Loss 94.57 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400837HN female research_filter QITC50272 3 162524824 162626676 101853 Loss 1 0.933823 10 11317 chas 15.38 Loss 94.57 Loss 96.41 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401012TP female research_filter NNNK99860 3 162524824 162626676 101853 Loss 1 0.914166 10 11317 chas 15.38 Loss 94.57 Loss 98.16 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400439IM female research_filter GUWW37548 3 162524824 162626676 101853 Loss 1 0.9229 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401195PN male research_filter LNYN65073 3 162524824 162626676 101853 Loss 1 0.932424 10 11317 chas 0 - 24.58 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401924ST male research_filter CCNM95095 3 162524824 162626676 101853 Loss 1 0.918046 10 11317 chas 0 - 24.58 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401881TJ male research_filter RVIS81666 3 162524824 162626676 101853 Loss 1 0.938233 10 11317 chas 0 - 89.49 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401852SK male research_filter TCSA61368 3 162524824 162626676 101853 Loss 1 0.94234 10 11317 chas 0 - 26.42 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400360SM male research_filter CAEK98371 3 162524824 162626676 101853 Loss 1 0.917802 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400243CK male research_filter SKOC60180 3 162524824 162626676 101853 Loss 1 0.918377 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 99.32 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400340CD male research_filter WUVU37744 3 162524824 162626676 101853 Loss 1 0.931417 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401763SG male research_filter QXAY99372 3 162524824 162626676 101853 Loss 1 0.922753 10 11317 chas 0 - 94.57 Loss 98.16 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400040CN male research_filter IXLI37228 3 162524824 162626676 101853 Loss 1 0.940045 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400241CP male research_filter CHSN35204 3 162524824 162626676 101853 Loss 1 0.930518 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400674CA male research_filter CMHA46888 3 162524824 162626676 101853 Loss 1 0.914201 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 99.33 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400825TW male research_filter ABMS89106 3 162524824 162626676 101853 Loss 1 0.931325 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401674DD male research_filter RDBP35321 3 162524824 162626676 101853 Loss 1 0.93492 10 11317 chas 0 - 89.49 Loss 24.58 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400773GS male research_filter MUBF17546 3 162524824 162626676 101853 Loss 1 0.905902 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400540BM male research_filter JKGU55742 3 162524824 162626676 101853 Loss 1 0.939509 10 11317 chas 0 - 26.42 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400880TM male research_filter ZMNN35179 3 162524824 162626676 101853 Loss 1 0.90232 10 11317 chas 0 - 94.57 Loss 98.16 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400430KV male research_filter NFGH10073 3 162524824 162626676 101853 Loss 1 0.92097 10 11317 chas 0 - 22.45 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400553PP male research_filter AEUU95723 3 162524824 162626676 101853 Loss 1 0.920815 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 402073LQ male research_filter GVAB34760 3 162524824 162626676 101853 Loss 1 0.946407 10 11317 chas 0 - 49.02 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400453LN male research_filter XNCW62958 3 162524824 162626676 101853 Loss 1 0.926878 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401490TL male research_filter PDHC59420 3 162524824 162626676 101853 Loss 1 0.940949 10 11317 chas 0 - 96.41 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401457WK male research_filter PTGD86385 3 162524824 162626676 101853 Loss 1 0.922272 10 11317 chas 0 - 94.57 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401262RR male research_filter MFZZ13533 3 162524824 162626676 101853 Loss 1 0.936347 10 11317 chas 0 - 49.02 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400164SS male research_filter YPPO84595 3 162524824 162626676 101853 Loss 1 0.921223 10 11317 chas 0 - 49.02 Loss 94.57 Loss #NAME? 64 NA NA NA "ChAS,NXS,PTK" 3q26.1 - - 0 - 0 - - "27778(3|Pang(2010),Ahn(2009))" "101853(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 64 - 0 "101853(265|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401857VG male research_filter MFZZ13533 X 70866428 70968279 101852 Gain 2 0.921725 24 4428 chas 42.85 Gain 0 - 0 - Gain-- 20 NA NA NA "ChAS,IPN" Xq13.1 - "FLJ46446,CXorf49B,LOC100132741,BCYRN1,CXorf49" 5 "FLJ46446,CXorf49B,LOC100132741,BCYRN1,CXorf49" 5 - - 64163(1|Kidd(2008)) "101852(12|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Pang(2010),Shaikh(2009))" - 67 20 - 0 "101852(21|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400164SS male research_filter LYLG55293 11 101894735 101996402 101668 Gain 3 0.902709 104 987 chas 90.84 Gain 95.43 Gain 0 - GainGain- 49 90.85 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 11q22.1 - "C11orf70,YAP1" 2 "C11orf70,YAP1" 2 - - - - - - 49 - 0 "101668(3|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" IJPA28382 X 101480784 101582433 101650 Loss 1 0.882288 12 9240 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 4 - 0 101650(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400103BN female - QKSF16477 X 151634331 151735957 101627 Loss 0 0.928092 46 2258 chas 77.25 Loss 0 - 0 - Loss-- 51 NA NA NA "ChAS,IPN" Xq28 - - 0 - 0 - - - - - 2 51 - 0 "45989(2|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" APCI57441 12 47949003 48050624 101622 Gain 3 0.890993 76 1354 chas 92.08 Gain 95.06 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 12q13.11 - - 0 - 0 - - - "101622(2|Pinto(2007),Zogopoulos(2007))" 1(1|Mills(2006)) - 62 - 0 "101622(8|Kidd(2008),Levy(2007),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401832MC female "research_filter, clinical_filter" DZVA59681 13 87231949 87333525 101577 Gain 3 0.908708 72 1430 chas 99.94 Gain 99.98 Gain 100 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - - - - 61 - 0 "55670(3|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" UKBP75340 1 120531926 120633435 101510 Gain 3 0.872132 116 882 chas 0 - 0 - 0 - --- 16 0 - - ChAS "1p11.2,1p12" - NOTCH2 1 NOTCH2 1 NOTCH2 - - "101510(8|Conrad(2009),Korbel(2007),Perry(2008),Matsuzaki(2009),Ju(2010),Park(2010),Wheeler(2008))" - 100 16 - 0 "101510(56|Ju(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Campbell(2011),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 400059SV female clinical_filter BGWX92658 10 27607905 27709398 101494 Loss 1 0.921069 114 898 chas 97.24 Loss 98.62 Loss 98.63 Loss LossLossLoss 91 97.24 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p12.1 - PTCHD3 1 PTCHD3 1 - - - "101494(24|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 963(1|Matsuzaki(2009)) 43 91 - 0 "101494(73|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Campbell(2011),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Kidd(2010b),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401566DD male "research_filter, clinical_filter" FPLE23103 11 51126724 51228168 101445 Loss 1 0.891076 22 4830 chas 32.65 Loss 0 - 0 - Loss-- 26 NA NA NA "ChAS,IPN" 11p11.12 - - 0 - 0 - - - "101445(8|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" 463(1|Wang(2008)) - 26 - 0 "101445(51|Ju(2010),Conrad(2009),Wang(2008),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400337HG male research_filter OBHQ36250 14 22837283 22938641 101359 Loss 1 0.868426 124 824 chas 0 - 100 Loss 100 Loss #NAME? 72 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "101359(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 72 - 0 "101359(89|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401011PJ female "research_filter, clinical_filter" PSUS84601 10 47587331 47688677 101347 Loss 1 0.921579 16 6756 chas 98 Loss 62.58 Loss 66.07 Loss LossLossLoss 154 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 - ANTXRL 1 ANTXRL 1 - - "43977(2|Ahn(2009),McKernan(2009))" "101347(79|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1287(11|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 83 154 - 0 "101347(399|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401021SC female research_filter SDOC11846 10 47587331 47688677 101347 Loss 1 0.916975 16 6756 chas 20.32 Loss 66.07 Loss 69.39 Loss LossLossLoss 154 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q11.22 - ANTXRL 1 ANTXRL 1 - - "43977(2|Ahn(2009),McKernan(2009))" "101347(79|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1287(11|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 83 154 - 0 "101347(399|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400325BE male research_filter COLF20670 10 47587331 47688677 101347 Loss 1 0.903675 16 6756 chas 20.32 Loss 66.07 Loss 66.07 Loss LossLossLoss 154 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 - ANTXRL 1 ANTXRL 1 - - "43977(2|Ahn(2009),McKernan(2009))" "101347(79|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1287(11|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 83 154 - 0 "101347(399|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401026AM female research_filter FNEG58263 10 47587331 47688677 101347 Loss 1 0.907236 16 6756 chas 0 - 66.07 Loss 66.07 Loss #NAME? 154 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 10q11.22 - ANTXRL 1 ANTXRL 1 - - "43977(2|Ahn(2009),McKernan(2009))" "101347(79|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1287(11|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 83 154 - 0 "101347(399|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400836LK male research_filter VUND65965 10 17935317 18036656 101340 Loss 1 0.883582 10 11260 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 51 6 - 0 "101340(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401498HH male - XROV61149 1 148539255 148640398 101144 Loss 1 0.868404 44 2352 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS 1q21.2 - "NBPF16,NBPF15" 2 "NBPF16,NBPF15" 2 - - - "101144(23|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Pinto(2007),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" - 100 17 - 0 "101144(56|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Locke(2006),Durbin(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 401480PG male clinical_filter ELGU40718 15 85084471 85185600 101130 Gain 3 0.898861 94 1087 chas 99.16 Gain 94.31 Gain 0 - GainGain- 51 94.55 Gain "BS,IP6" "ChAS,IPN,NXS" 15q25.2 - "SCAND2,LOC100506874,UBE2Q2P1,ZSCAN2" 4 "SCAND2,LOC100506874,UBE2Q2P1,ZSCAN2" 4 - - - "18601(4|Conrad(2009),Redon(2006),Perry(2008))" - 52 51 - 0 "101130(37|Conrad(2009),Redon(2006),Perry(2008),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401259LS female "research_filter, clinical_filter" UKBP75340 1 9303743 9404693 100951 Gain 3 0.903579 88 1160 chas 48.19 Gain 69.86 Gain 0 - GainGain- 63 77.31 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "88847(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "100951(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400059SV female "research_filter, clinical_filter" XSMN99460 1 9303743 9404693 100951 Gain 3 0.907228 88 1160 chas 30.32 Gain 86.1 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "88847(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "100951(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401235IA male "research_filter, clinical_filter" XTPE89033 17 44187492 44288442 100951 Gain 3 0.891583 104 980 chas 37.38 Gain 37.42 Gain 100 Gain GainGainGain 92 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" ZRAK81940 17 44187492 44288442 100951 Gain 3 0.905155 104 980 chas 24.3 Gain 100 Gain 100 Gain GainGainGain 92 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401864CV female "research_filter, clinical_filter" IRJE88693 17 44187492 44288442 100951 Gain 4 0.9218 104 980 chas 66.1 Gain 100 Gain 100 Gain GainGainGain 92 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" KLXQ40405 17 44187492 44288442 100951 Gain 3 0.911443 104 980 chas 37.38 Gain 100 Gain 100 Gain GainGainGain 92 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400051MR_1 male "research_filter, clinical_filter" GPMX61747 17 44187492 44288442 100951 Gain 3 0.902414 104 980 chas 31.58 Gain 100 Gain 100 Gain GainGainGain 92 100 Gain BS "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" RSYQ67471 17 44187492 44288442 100951 Gain 3 0.91483 104 980 chas 65.45 Gain 100 Gain 100 Gain GainGainGain 92 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400624RJ male "research_filter, clinical_filter" IREV30826 17 44187492 44288442 100951 Gain 3 0.902523 104 980 chas 99.19 Gain 58.46 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401413RG male "research_filter, clinical_filter" TGHP62000 17 44187492 44288442 100951 Gain 3 0.90871 104 980 chas 100 Gain 100 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400882DD male "research_filter, clinical_filter" IDTW13637 17 44187492 44288442 100951 Gain 3 0.904145 104 980 chas 100 Gain 100 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" UWAE35667 17 44187492 44288442 100951 Gain 3 0.886165 104 980 chas 100 Gain 100 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 100951(1|Kidd(2008)) "100951(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 7 92 - 0 "100951(252|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" YZPM76095 10 47587331 47688275 100945 Loss 1 0.921513 15 7210 chas 20.4 Loss 69.71 Loss 69.71 Loss LossLossLoss 154 NA NA NA "ChAS,IPN,NXS,PTK" 10q11.22 - ANTXRL 1 ANTXRL 1 - - "43977(2|Ahn(2009),McKernan(2009))" "100945(79|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),Ju(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1287(11|Ahn(2009),Matsuzaki(2009),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" 84 153 - 0 "100945(399|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Sebat(2004),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Mills(2006),Wang(2007),Ahn(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401841OB male research_filter GUYS21436 14 22843578 22944507 100930 Loss 1 0.880725 138 736 chas 0 - 81.79 Loss 0 - -Loss- 83 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "100930(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 83 - 0 "100930(93|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400582WS female "research_filter, clinical_filter" UZKE50615 4 69435889 69536776 100888 Gain 3 0.885047 44 2346 chas 49.64 Gain 48.65 Gain 0 - GainGain- 41 68.61 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400789KV male research_filter PTWY73614 4 69435889 69536776 100888 Gain 3 0.897507 44 2346 chas 49.64 Gain 49.58 Gain 0 - GainGain- 41 52.96 Gain GTC "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401540GM male research_filter VRGJ17464 4 69435889 69536776 100888 Gain 3 0.885798 44 2346 chas 99.99 Gain 55.94 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401914PR male research_filter RXRT66436 4 69435889 69536776 100888 Gain 3 0.883535 44 2346 chas 49.64 Gain 55.94 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401414CR male research_filter SJFM69248 4 69435889 69536776 100888 Gain 3 0.888121 44 2346 chas 49.64 Gain 55.94 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401655DC male research_filter CRTB70467 4 69435889 69536776 100888 Gain 3 0.888707 44 2346 chas 0 - 49.58 Gain 0 - -Gain- 41 0 - - "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100888(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100888(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400577MK female research_filter DMPI37172 4 69435889 69536775 100887 Gain 3 0.888077 43 2402 chas 49.64 Gain 55.94 Gain 58.82 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100887(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100887(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400287BP male research_filter KAYE11117 4 69435889 69536775 100887 Gain 3 0.895208 43 2402 chas 49.64 Gain 55.94 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100887(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100887(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400686BM male research_filter OSRU53198 2 205855415 205956253 100839 Loss 1 0.911215 124 819 chas 92.44 Loss 95.88 Loss 95.88 Loss LossLossLoss 75 99.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q33.3 - PARD3B 1 PARD3B 1 - - - "57484(2|Conrad(2009),Mills(2006))" - - 75 - 0 "59634(12|Conrad(2009),Levy(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400854SG male "research_filter, clinical_filter" XGQH24350 14 22837374 22938211 100838 Loss 1 0.85986 120 847 chas 0 - 44.54 Loss 100 Loss #NAME? 71 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "100838(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 71 - 0 "100838(89|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401215MJ female "research_filter, clinical_filter" ZIOC12306 4 69435889 69536713 100825 Gain 3 0.888074 42 2459 chas 49.67 Gain 48.68 Gain 0 - GainGain- 40 0 - - "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_no 400852WJ male research_filter LHMB79045 4 69435889 69536713 100825 Gain 3 0.88693 42 2459 chas 49.67 Gain 58.77 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401285HN male research_filter QBXB16173 4 69435889 69536713 100825 Gain 3 0.886126 42 2459 chas 49.68 Gain 58.77 Gain 75.9 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402052ZA male research_filter HAAE15834 4 69435889 69536713 100825 Gain 3 0.899594 42 2459 chas 49.67 Gain 21.12 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401899MB male research_filter TRLD69151 4 69435889 69536713 100825 Gain 3 0.897771 42 2459 chas 49.67 Gain 53.01 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401514BA male research_filter QKWF92816 4 69435889 69536713 100825 Gain 3 0.887679 42 2459 chas 0 - 51.34 Gain 0 - -Gain- 40 53 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400295PS female research_filter NNNK99860 4 69435889 69536713 100825 Gain 3 0.891086 42 2459 chas 0 - 51.34 Gain 0 - -Gain- 40 NA NA NA "ChAS,NXS" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "100825(31|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) 48 40 - 0 "100825(315|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400439IM female research_filter LTTD14271 4 117410693 117511507 100815 Gain 3 0.916725 60 1708 chas 95.24 Gain 97.62 Gain 0 - GainGain- 58 95.51 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q26 - - 0 - 0 - - - "4814(2|Park(2010),McKernan(2009))" "424(5|Wang(2008),Wheeler(2008),Bentley(2008),Mills(2006))" 1 58 - 0 "63009(22|Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" TBVD73320 14 22858572 22959362 100791 Loss 1 0.851228 120 846 chas 0 - 0 - 0 - --- 78 NA NA NA ChAS 14q11.2 - - 0 - 0 - - 589(1|Ahn(2009)) "100791(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 78 - 0 "100791(95|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400712GC female clinical_filter SSWV37655 11 50472473 50573143 100671 Loss 1 0.907388 20 5298 chas 0 - 97.18 Loss 97.18 Loss #NAME? 14 NA NA NA "ChAS,NXS,PTK" 11p11.12 - - 0 - 0 - - - "100671(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 14 - 0 "100671(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401706BJ female research_filter FPLE23103 11 50472473 50573143 100671 Loss 1 0.909397 20 5298 chas 0 - 94.79 Loss 0 - -Loss- 14 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "100671(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 14 - 0 "100671(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400337HG male research_filter SBTA40047 11 50472473 50573143 100671 Loss 1 0.895658 20 5298 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "100671(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 14 - 0 "100671(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401628GC female - UXJM82913 11 50472473 50573143 100671 Loss 1 0.901981 20 5298 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "100671(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 14 - 0 "100671(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401359HF male - QEPL68818 11 50472473 50573143 100671 Loss 1 0.886169 20 5298 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "100671(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 14 - 0 "100671(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402028BD male - TTCB91135 3 118719895 118820510 100616 Gain 4 0.919928 96 1059 chas 44.47 Gain 93.39 Gain 73.31 Gain GainGainGain 46 NA NA NA "ChAS,IPN,NXS,PTK" 3q13.32 - IGSF11 1 IGSF11 1 - - - "82932(3|de Smith(2007),Itsara(2009),Jakobsson(2008))" - - 46 - 0 "100616(13|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401376RD male "research_filter, clinical_filter" LFVX88346 1 159484975 159585560 100586 Loss 1 0.909477 135 750 chas 98.88 Loss 97.91 Loss 99.44 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 1q23.2 - "OR10J5,APCS" 2 "OR10J5,APCS" 2 APCS - - - - - 82 - 0 "2350(3|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401694SG male "research_filter, clinical_filter" KRCX57170 22 24171305 24271732 100428 Gain 3 0.903037 184 548 chas 91.8 Gain 99.99 Gain 80.18 Gain GainGainGain 93 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.23 - "LOC284889,DERL3,SMARCB1,SLC2A11,MIF" 5 "LOC284889,DERL3,SMARCB1,SLC2A11,MIF" 5 "SMARCB1,MIF" - - "19703(10|Ahn(2009),Redon(2006),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Wheeler(2008))" "1151(2|Kim(2009),Mills(2006))" 0 93 - 0 "100428(43|Teague(2010),Ahn(2009),Wong(2007),Redon(2006),Locke(2006),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Tuzun(2005),Pinto(2011),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" LCVR91256 Y 25410628 25511018 100391 Loss 0 0.962974 22 4780 chas 100 Loss 0 - 0 - Loss-- 4 NA NA NA "ChAS,IPN" Yq11.223 - "DAZ3,DAZ2,DAZ4" 3 "DAZ3,DAZ2,DAZ4" 3 - "100391#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "100391(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 4 - 0 "100391(4|McCarroll(2008),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes NA 401510DG male research_filter AXJJ81139 1 49854442 49954701 100260 Loss 1 0.913488 94 1078 chas 98.01 Loss 99.01 Loss 99 Loss LossLossLoss 42 98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 42 - 0 "59488(6|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400432VA male "research_filter, clinical_filter" JVBB89605 1 9304745 9404967 100223 Gain 3 0.903721 85 1193 chas 19.84 Gain 78.1 Gain 0 - GainGain- 60 75.59 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "89121(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 60 - 0 "100223(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" QITC50272 X 127145686 127245906 100221 Loss 1 0.911234 71 1431 chas 90.55 Loss 0 - 0 - Loss-- 56 NA NA NA "ChAS,IPN" Xq25 - ACTRT1 1 ACTRT1 1 - - - - - - 55 - 0 "100221(9|Kidd(2008),Redon(2006),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" APCZ69205 19 416231 516351 100121 Gain 3 0.9088 37 2781 chas 32.84 Gain 43.97 Gain 0 - GainGain- 33 0 - - "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "100121(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 32 - 0 "100121(96|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400970VE female research_filter HOIC14625 19 416231 516350 100120 Gain 3 0.917859 36 2860 chas 32.25 Gain 34.21 Gain 0 - GainGain- 32 0 - - "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "100120(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 32 - 0 "100120(96|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400619MP male research_filter BHQW11777 19 416231 516350 100120 Gain 3 0.902969 36 2860 chas 33.7 Gain 34.21 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "100120(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 32 - 0 "100120(96|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401027KW male research_filter QBXB16173 19 416231 516350 100120 Gain 3 0.899408 36 2860 chas 32.56 Gain 34.21 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "100120(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 32 - 0 "100120(96|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 402052ZA male research_filter FIIC23299 16 15316619 15416699 100081 Gain 3 0.869293 116 870 chas 0 - 0 - 100 Gain #NAME? 10 NA NA NA "ChAS,PTK" 16p13.11 - - 0 - 0 - - - "100081(4|Matsuzaki(2009),Perry(2008))" - 100 10 - 0 "100081(8|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2008),Korbel(2007),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 400843FL female "research_filter, clinical_filter" JSXF59945 8 6235483 6335548 100066 Gain 3 0.905772 132 763 chas 83.8 Gain 84.42 Gain 100 Gain GainGainGain 125 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.1 - "MCPH1,LOC100287015" 2 "MCPH1,LOC100287015" 2 MCPH1 - - "18026(3|Pang(2010),Redon(2006),Shaikh(2009))" - - 125 MCPH1#id_known 1 "100066(16|Redon(2006),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female "research_filter, clinical_filter" XSMN99460 19 416231 516203 99973 Gain 3 0.909905 35 2940 chas 29.89 Gain 46.99 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 19p13.3 - "TPGS1,ODF3L2,SHC2,MADCAM1" 4 "TPGS1,ODF3L2,SHC2,MADCAM1" 4 - - - "99973(20|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),McKernan(2009),Kidd(2008),Cooper(2008),Shaikh(2009))" "4698(16|Conrad(2009),Matsuzaki(2009),Wang(2008),Levy(2007),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" 3 32 - 0 "99973(96|Wang(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Campbell(2011),Perry(2008b),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401235IA male research_filter PXVB29564 3 121290300 121390271 99972 Gain 3 0.906985 191 526 chas 52.31 Gain 99.15 Gain 100 Gain GainGainGain 92 NA NA NA "ChAS,IPN,NXS,PTK" 3q13.33 - "HCLS1,ARGFX,GOLGB1,FBXO40" 4 "HCLS1,ARGFX,GOLGB1,FBXO40" 4 - - - "33166(3|de Smith(2007),Redon(2006),Perry(2008))" - 5 91 FBXO40#asd_candidate 1 "99972(10|Wong(2007),Redon(2006),De(Smith_2007),Durbin(2010),Perry(2008))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" RMNM29531 5 104256955 104356919 99965 Loss 1 0.926903 56 1817 chas 83.52 Loss 94.07 Loss 83.67 Loss LossLossLoss 76 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - - 0 - 0 - - - "95778(4|Wang(2007),Pinto(2007),Redon(2006),Simon-Sanchez(2007))" - - 76 - 0 "99965(12|Wang(2007),Redon(2006),Durbin(2010),Shaikh(2009),Perry(2008b),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" OVRI44012 1 9304745 9404693 99949 Gain 3 0.906257 84 1204 chas 37.8 Gain 75.2 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "88847(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 60 - 0 "99949(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400083TG male "research_filter, clinical_filter" RMNM29531 7 38294983 38394857 99875 Gain 3 0.880652 100 1008 chas 0 - 56.87 Gain 99.93 Gain #NAME? 122 100 Gain GTC "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "99875(35|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 122 - 0 "99875(106|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" ISVP82924 7 38294983 38394857 99875 Gain 3 0.876811 100 1008 chas 0 - 23.98 Gain 0 - -Gain- 122 NA NA NA "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "99875(35|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 122 - 0 "99875(106|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401400NP male "research_filter, clinical_filter" SBZX25020 19 23999860 24099679 99820 Gain 3 0.882432 111 907 chas 55.53 Gain 98.68 Gain 99.99 Gain GainGainGain 85 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - "RPSAP58,ZNF726" 2 "RPSAP58,ZNF726" 2 - - - "99820(9|Ahn(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Pinto(2007),Mills(2006))" 220(1|McKernan(2009)) 6 85 - 0 "99820(36|Teague(2010),Ahn(2009),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" DBFY56089 7 159017238 159116965 99728 Gain 3 0.912447 172 583 chas 99.55 Gain 99.96 Gain 100 Gain GainGainGain 70 99.69 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q36.3 - - 0 - 0 - - - "99728(8|Ahn(2009),Korbel(2007),Matsuzaki(2009),Bentley(2008),Park(2010),Zogopoulos(2007))" 199(1|Bentley(2008)) 18 70 - 0 "99728(44|Teague(2010),Ahn(2009),Wong(2007),Perry(2008),Conrad(2006),Durbin(2010),Bentley(2008),Korbel(2007),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400458LS female "research_filter, clinical_filter" QMCQ87044 15 43896251 43995896 99646 Gain 3 0.882708 60 1688 chas 22.57 Gain 5.04 Gain 0 - GainGain- 23 81.43 Gain "BS,IP6" "ChAS,IPN,NXS" 15q15.3 - "STRC,CKMT1A,CATSPER2" 3 "STRC,CKMT1A,CATSPER2" 3 STRC - - "99646(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 23 - 0 "99646(43|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400152MR male "research_filter, clinical_filter" USNP20353 15 43896295 43995896 99602 Loss 1 0.881893 59 1717 chas 6.31 Loss 29.11 Loss 47.63 Loss LossLossLoss 22 81.46 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,CKMT1A,CATSPER2" 3 "STRC,CKMT1A,CATSPER2" 3 STRC - - "99602(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 22 - 0 "99602(43|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400082SD female "research_filter, clinical_filter" TJGR62389 6 29836623 29936194 99572 Gain 3 0.888696 56 1810 chas 0 - 0 - 0 - --- 77 0 - - ChAS 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "99572(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 39 77 - 0 "99572(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no affy6_no 400207HN male clinical_filter SURU67526 17 36311009 36410559 99551 Loss 1 0.892122 28 3687 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "99551(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 3 - 0 "99551(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 400675HC female clinical_filter QNLU68354 17 36311009 36410559 99551 Gain 3 0.915735 28 3687 chas 0 - 94.39 Gain 0 - -Gain- 3 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "99551(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 3 - 0 "99551(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401829FJ female research_filter AQKH94698 17 36311009 36410559 99551 Gain 3 0.900725 28 3687 chas 0 - 0 - 0 - --- 3 0 - - ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "99551(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 3 - 0 "99551(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400955BE male - MOBN67062 2 40145915 40245464 99550 Gain 3 0.890353 76 1327 chas 78.62 Gain 99.92 Gain 99.97 Gain GainGainGain 83 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.1 - LOC100128590 1 LOC100128590 1 - - - 56784(1|Itsara(2009)) - - 83 - 0 "93583(8|Itsara(2009),Kidd(2008),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400569WC female "research_filter, clinical_filter" JPSN96941 1 231712604 231812141 99538 Gain 3 0.899602 156 642 chas 100 Gain 95.59 Gain 100 Gain GainGainGain 54 NA NA NA "ChAS,IPN,NXS,PTK" 1q42.2 - "DISC1,LOC100287814,TSNAX-DISC1" 3 "DISC1,LOC100287814,TSNAX-DISC1" 3 DISC1 - - "99538(4|Redon(2006),Shaikh(2009),Perry(2008))" - - 54 DISC1#asd_candidate 1 "99538(9|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" YQHR22161 17 36311009 36410533 99525 Gain 4 0.938586 27 3827 chas 0 - 97.01 Gain 0 - -Gain- 2 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "99525(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "99525(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400845ML female research_filter ABMS89106 17 36311009 36410533 99525 Gain 3 0.908876 27 3827 chas 0 - 72.63 Gain 0 - -Gain- 2 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "99525(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 2 - 0 "99525(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401674DD male research_filter LTTD14271 6 29836623 29936041 99419 Gain 3 0.890762 54 1875 chas 0 - 12.63 Gain 0 - -Gain- 77 0 - - "ChAS,NXS" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "99419(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 39 77 - 0 "99419(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400050RL female "research_filter, clinical_filter" FPLE23103 8 43625199 43724423 99225 Loss 1 0.898057 28 3675 chas 93.34 Loss 96.63 Loss 0 - LossLoss- 17 NA NA NA "ChAS,IPN,NXS" 8p11.1 - - 0 - 0 - - - "99225(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 17 - 0 "99225(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400337HG male "research_filter, clinical_filter" FNMA81925 10 17938195 18037368 99174 Loss 1 0.8767 10 11019 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 50 6 - 0 "99174(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400171BJ male - IAET85141 10 17938195 18037328 99134 Loss 1 0.874927 9 12391 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 50 6 - 0 "99134(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401136LB male - TASV63603 10 17938195 18037328 99134 Loss 1 0.885576 9 12391 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 50 6 - 0 "99134(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400255CD male - LOAP92341 10 17938195 18037328 99134 Loss 1 0.873976 9 12391 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 50 6 - 0 "99134(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401554VN male - VBEF49630 10 17938195 18037328 99134 Loss 1 0.879773 9 12391 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 50 6 - 0 "99134(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400022WA female - MDAA91863 5 109265100 109364233 99134 Gain 3 0.906753 60 1680 chas 96.49 Gain 98.49 Gain 0 - GainGain- 72 97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q21.3 - - 0 - 0 - - - 1059(1|Shaikh(2009)) "782(4|Wang(2008),Ahn(2009),Mills(2006))" - 72 - 0 "99134(22|Ahn(2009),Wong(2007),Wang(2008),Durbin(2010),Itsara(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" HAAE15834 16 35183776 35282898 99123 Loss 1 0.900603 12 9011 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 16p11.1 - - 0 - 0 - - - "81795(9|Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Shaikh(2009))" - - 4 - 0 "99123(32|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401899MB male - VIXQ67410 16 35183776 35282898 99123 Loss 1 0.91187 12 9011 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 16p11.1 - - 0 - 0 - - - "81795(9|Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Shaikh(2009))" - - 4 - 0 "99123(32|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401297KC male - GDLU88739 X 140683975 140783042 99068 Gain 3 0.893656 104 961 chas 100 Gain 0 - 0 - Gain-- 70 NA NA NA "ChAS,IPN" Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 39520(2|Kidd(2008)) "92609(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 25 69 - 0 "99068(17|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Locke(2006),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" UBKP24592 4 138084969 138183949 98981 Loss 1 0.931943 75 1337 chas 100 Loss 99.51 Loss 84.11 Loss LossLossLoss 132 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - "98981(30|Wang(2007),Ju(2010),Conrad(2005),Perry(2008),Conrad(2009),McKernan(2009),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Park(2010),McCarroll(2005),Kim(2009),Shaikh(2009))" - - 132 - 0 "98981(200|Teague(2010),Redon(2006),Conrad(2009),Perry(2008b),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Kim(2009),Wang(2007),Ju(2010),McKernan(2009),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401513KC male "research_filter, clinical_filter" RVIS81666 14 63766974 63865925 98952 Gain 3 0.913234 116 860 chas 91.84 Gain 95.91 Gain 95.91 Gain GainGainGain 78 91.85 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q23.2 - "PPP2R5E,GPHB5" 2 "PPP2R5E,GPHB5" 2 - - - "98952(5|Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009))" "784(3|Ahn(2009),Bentley(2008),Mills(2006))" 5 78 - 0 "98952(32|Ahn(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" SEHC73357 6 29837158 29936041 98884 Gain 3 0.873429 50 2018 chas 0 - 8.13 Gain 0 - -Gain- 72 NA NA NA "ChAS,NXS" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "98884(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 40 72 - 0 "98884(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402019MC male "research_filter, clinical_filter" PYXL51166 2 98063359 98162176 98818 Loss 1 0.922813 19 5489 chas 24.04 Loss 22.57 Loss 0 - LossLoss- 12 21.69 Loss "BS,IP6" "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401146US female research_filter QCXI89270 2 98063359 98162176 98818 Loss 1 0.891334 19 5489 chas 99.99 Loss 0 - 0 - Loss-- 12 21.69 Loss "BS,IP6" "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400558BL female research_filter BOER26307 2 98063359 98162176 98818 Gain 4 0.947701 19 5489 chas 24.04 Gain 100 Gain 0 - GainGain- 12 0 - - "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400571WV female research_filter VABQ19693 2 98063359 98162176 98818 Loss 1 0.908827 19 5489 chas 99.99 Loss 22.57 Loss 0 - LossLoss- 12 21.21 Loss BS "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400493KH male research_filter VUCC31552 2 98063359 98162176 98818 Gain 4 0.934293 19 5489 chas 23.81 Gain 100 Gain 0 - GainGain- 12 21.69 Gain IP6 "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400109LJ male research_filter DMPI37172 2 98063359 98162176 98818 Gain 4 0.906069 19 5489 chas 99.99 Gain 0 - 0 - Gain-- 12 NA NA NA "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400287BP male research_filter TASV63603 2 98063359 98162176 98818 Gain 4 0.921929 19 5489 chas 0 - 100 Gain 0 - -Gain- 12 0 - - "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_no 400255CD male research_filter GHAL32977 2 98063359 98162176 98818 Gain 4 0.929468 19 5489 chas 0 - 100 Gain 0 - -Gain- 12 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401734PG male research_filter LMDJ78561 2 98063359 98162176 98818 Loss 1 0.929449 19 5489 chas 0 - 99.65 Loss 100 Loss #NAME? 12 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401518VK female research_filter VUUO47049 2 98063359 98162176 98818 Loss 1 0.903898 19 5489 chas 0 - 34.27 Loss 100 Loss #NAME? 12 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400533BB female research_filter TGGX58243 2 98063359 98162176 98818 Loss 1 0.920348 19 5489 chas 0 - 24.04 Loss 24.04 Loss #NAME? 12 NA NA NA "ChAS,NXS,PTK" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400942HR male research_filter YPPO84595 2 98063359 98162176 98818 Loss 1 0.91688 19 5489 chas 0 - 34.16 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401857VG male research_filter VDRD32700 2 98063359 98162176 98818 Loss 1 0.887348 19 5489 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98818(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 12 - 0 "98818(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400271SR male - XOQW96687 14 22854801 22953607 98807 Gain 3 0.868691 126 790 chas 0 - 61.6 Gain 0 - -Gain- 80 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "98807(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 80 - 0 "98807(93|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400121PL female "research_filter, clinical_filter" UFYD24142 14 22854801 22953607 98807 Gain 3 0.866221 126 790 chas 0 - 0 - 0 - --- 80 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "98807(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 80 - 0 "98807(93|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no NA 400313DF female clinical_filter IDKP47812 7 38292663 38391352 98690 Gain 3 0.876604 102 977 chas 0 - 0 - 0 - --- 122 NA NA NA ChAS 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "98690(33|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 26 122 - 0 "98690(97|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401377MA male clinical_filter ZKED26020 X 140122315 140220878 98564 Loss 1 0.897678 12 8960 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS Xq27.1 - - 0 - 0 - - 98564(1|Kidd(2008)) "80010(3|Conrad(2009),Cooper(2008),Matsuzaki(2009))" - 88 12 - 0 "98564(10|Conrad(2009),Redon(2006),Durbin(2010),Kidd(2008),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401652HL female - TPDE39419 3 162528531 162627001 98471 Loss 1 0.922186 9 12308 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98471(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98471(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401369GR male - PIAG15925 3 162528531 162627001 98471 Loss 1 0.894043 9 12308 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98471(31|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98471(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400995MS female - RWTQ90156 10 17938195 18036656 98462 Loss 1 0.879667 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400717BD male - XMAJ27378 10 17938195 18036656 98462 Loss 1 0.887627 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401100SJ female - BNID76344 10 17938195 18036656 98462 Loss 1 0.886599 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400994HJ male - OYDK45967 10 17938195 18036656 98462 Loss 1 0.886887 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401162TM female - LHRU87236 10 17938195 18036656 98462 Loss 1 0.887121 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401038LN female - ZIOC12306 10 17938195 18036656 98462 Loss 1 0.886751 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400852WJ male - JJLS74641 10 17938195 18036656 98462 Loss 1 0.891901 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400929MM male - HUDD82297 10 17938195 18036656 98462 Loss 1 0.888599 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400782IE male - LAJJ28425 10 17938195 18036656 98462 Loss 1 0.887008 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400728PB female - YBMF74034 10 17938195 18036656 98462 Loss 1 0.88985 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401806DL male - WVDE74465 10 17938195 18036656 98462 Loss 1 0.885428 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401838EN male - TBRP43796 10 17938195 18036656 98462 Loss 1 0.901984 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401894PD male - MRAO63769 10 17938195 18036656 98462 Loss 1 0.908105 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400093BL female - KWJN47187 10 17938195 18036656 98462 Loss 1 0.886652 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400821FE female - DBFY56089 10 17938195 18036656 98462 Loss 1 0.900473 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400458LS female - MTFT89424 10 17938195 18036656 98462 Loss 1 0.894774 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400949AM male - GKVG35266 10 17938195 18036656 98462 Loss 1 0.90462 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400248JO female - XMVT70735 10 17938195 18036656 98462 Loss 1 0.88714 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401873BK male - YMNK31782 10 17938195 18036656 98462 Loss 1 0.896555 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400438DB female - FSQK31243 10 17938195 18036656 98462 Loss 1 0.894875 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400863SS female - FNEG58263 10 17938195 18036656 98462 Loss 1 0.909407 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400836LK male - ELXG87337 10 17938195 18036656 98462 Loss 1 0.893299 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401634CH male - RVIS81666 10 17938195 18036656 98462 Loss 1 0.899988 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401852SK male - TCSA61368 10 17938195 18036656 98462 Loss 1 0.882046 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400360SM male - FEZX98083 10 17938195 18036656 98462 Loss 1 0.884033 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400106PC male - JXQB25794 10 17938195 18036656 98462 Loss 1 0.896625 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 402009WP male - EGQB52790 10 17938195 18036656 98462 Loss 1 0.887033 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400277LM female - AGIM53957 10 17938195 18036656 98462 Loss 1 0.908454 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400564SN female - KECG80750 10 17938195 18036656 98462 Loss 1 0.888056 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400893ZE male - TZGC22320 10 17938195 18036656 98462 Loss 1 0.88519 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401295HB male - UVWE33125 10 17938195 18036656 98462 Loss 1 0.916968 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401423BA male - QUHC56771 10 17938195 18036656 98462 Loss 1 0.891191 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400128MJ female - KLEB18411 10 17938195 18036656 98462 Loss 1 0.884417 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400300SD female - WQLL63278 10 17938195 18036656 98462 Loss 1 0.895977 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400503HD male - RAZI40834 10 17938195 18036656 98462 Loss 1 0.889928 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400021ME_1 male - WUMM65746 10 17938195 18036656 98462 Loss 1 0.896793 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400077EB female - SDOC11846 10 17938195 18036656 98462 Loss 1 0.887025 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400325BE male - ZRAK81940 10 17938195 18036656 98462 Loss 1 0.894918 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401864CV female - ELGU40718 10 17938195 18036656 98462 Loss 1 0.888349 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401259LS female - EJLX27201 10 17938195 18036656 98462 Loss 1 0.891438 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400545EW_1 female - BGWX92658 10 17938195 18036656 98462 Loss 1 0.908879 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401566DD male - HXGR62358 10 17938195 18036656 98462 Loss 1 0.918021 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400156WT_1 male - GTRU40344 10 17938195 18036656 98462 Loss 1 0.922553 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400134WK_1 male - ZRZC68152 10 17938195 18036656 98462 Loss 1 0.896685 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400155CW male - CVRD94421 10 17938195 18036656 98462 Loss 1 0.894566 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400586RD male - ZVRQ32621 10 17938195 18036656 98462 Loss 1 0.887142 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401176BD male - EMAP66239 10 17938195 18036656 98462 Loss 1 0.90378 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401618HR male - TFBW53379 10 17938195 18036656 98462 Loss 1 0.892472 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401087SF male - TTBC76525 10 17938195 18036656 98462 Loss 1 0.895479 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400371GA female - ZSEZ81141 10 17938195 18036656 98462 Loss 1 0.888262 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400240HJ female - VABQ19693 10 17938195 18036656 98462 Loss 1 0.890056 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400493KH male - EFCN47469 10 17938195 18036656 98462 Loss 1 0.883815 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400483DP male - UHIX56739 10 17938195 18036656 98462 Loss 1 0.893432 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401040KM female - AYLS39762 10 17938195 18036656 98462 Loss 1 0.906088 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400663MD female - WSYP96126 10 17938195 18036656 98462 Loss 1 0.902845 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400660GK male - RDPM47345 10 17938195 18036656 98462 Loss 1 0.889939 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400554WB male - UAZI16039 10 17938195 18036656 98462 Loss 1 0.892615 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400625FT male - RYUR49963 10 17938195 18036656 98462 Loss 1 0.878707 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400177SJ male - UUAC53094 10 17938195 18036656 98462 Loss 1 0.892469 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400849SH male - PRHX42947 10 17938195 18036656 98462 Loss 1 0.890167 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400429YF female - WVAB12930 10 17938195 18036656 98462 Loss 1 0.894217 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400655WB female - YZQJ34471 10 17938195 18036656 98462 Loss 1 0.891436 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400482MD male - XPRZ52054 10 17938195 18036656 98462 Loss 1 0.885057 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400611GG male - HOIC14625 10 17938195 18036656 98462 Loss 1 0.88589 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400619MP male - DGQM75197 10 17938195 18036656 98462 Loss 1 0.886441 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400518MS female - IGQR94047 10 17938195 18036656 98462 Loss 1 0.886298 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400060MC female - ORNW53006 10 17938195 18036656 98462 Loss 1 0.888293 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400494ML female - GFOF72186 10 17938195 18036656 98462 Loss 1 0.906435 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401942MP male - DBZL89045 10 17938195 18036656 98462 Loss 1 0.900437 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400032RC female - FPEA56091 10 17938195 18036656 98462 Loss 1 0.887122 8 14066 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400075MR male - ORXL21407 10 17938195 18036656 98462 Loss 1 0.889722 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 402064DC male - ABMS89106 10 17938195 18036656 98462 Loss 1 0.889612 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401674DD male - MUIH56067 10 17938195 18036656 98462 Loss 1 0.89367 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400930MK female - WSSG80726 10 17938195 18036656 98462 Loss 1 0.892224 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400515ZG male - JQGN11749 10 17938195 18036656 98462 Loss 1 0.892745 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400534ME male - DZVA59681 10 17938195 18036656 98462 Loss 1 0.895799 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400606HW male - BYSK29073 10 17938195 18036656 98462 Loss 1 0.916691 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400620MT male - OGJP80646 10 17938195 18036656 98462 Loss 1 0.885663 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400704LC female - JSHH93314 10 17938195 18036656 98462 Loss 1 0.87894 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400719TM female - WPKS46597 10 17938195 18036656 98462 Loss 1 0.883597 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400732MA female - UOXQ52793 10 17938195 18036656 98462 Loss 1 0.903915 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400791GC female - NJBJ54022 10 17938195 18036656 98462 Loss 1 0.924882 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401066MM female - AJUD27157 10 17938195 18036656 98462 Loss 1 0.891544 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401075MN female - ERUW26412 10 17938195 18036656 98462 Loss 1 0.904311 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401308LD male - KXKI34745 10 17938195 18036656 98462 Loss 1 0.912234 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401994BD male - ZCOM63077 10 17938195 18036656 98462 Loss 1 0.885825 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401936BA male - RJMG42549 10 17938195 18036656 98462 Loss 1 0.888939 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400749VW male - VVPL10652 10 17938195 18036656 98462 Loss 1 0.884836 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400871CM female - EIAZ51546 10 17938195 18036656 98462 Loss 1 0.901114 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401261HD male - BWEV96807 10 17938195 18036656 98462 Loss 1 0.882674 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 402012RR male - UAVX81306 10 17938195 18036656 98462 Loss 1 0.894148 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400643LD male - VUFI80076 10 17938195 18036656 98462 Loss 1 0.888381 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 402001SR male - WMBQ46007 10 17938195 18036656 98462 Loss 1 0.887082 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401230NL female - QWII30838 10 17938195 18036656 98462 Loss 1 0.888904 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 402061PI female - TCTA60809 10 17938195 18036656 98462 Loss 1 0.886198 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401965TG female - NGFJ29672 10 17938195 18036656 98462 Loss 1 0.888448 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400269DA female - MKJI51363 10 17938195 18036656 98462 Loss 1 0.90117 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400047DS female - XOFJ42304 10 17938195 18036656 98462 Loss 1 0.880018 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400177CG male - MFZY15027 10 17938195 18036656 98462 Loss 1 0.894534 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401739BJ male - APCI57441 10 17938195 18036656 98462 Loss 1 0.885308 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401832MC female - OOSY20649 10 17938195 18036656 98462 Loss 1 0.883485 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401817MC female - QBLX62038 10 17938195 18036656 98462 Loss 1 0.887493 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401681MS female - IAQN76409 10 17938195 18036656 98462 Loss 1 0.891112 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401820SD female - LMDJ78561 10 17938195 18036656 98462 Loss 1 0.890991 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401518VK female - NQKM94057 10 17938195 18036656 98462 Loss 1 0.895308 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400917CG female - XSMN99460 10 17938195 18036656 98462 Loss 1 0.907 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401235IA male - PRED73338 10 17938195 18036656 98462 Loss 1 0.889173 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401183HP female - VZCC67569 10 17938195 18036656 98462 Loss 1 0.896015 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400906BR male - APBT44417 10 17938195 18036656 98462 Loss 1 0.882972 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400701MM female - GDLU88739 10 17938195 18036656 98462 Loss 1 0.886237 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400268SY female - PIAG15925 10 17938195 18036656 98462 Loss 1 0.882208 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400995MS female - EGYT92211 10 17938195 18036656 98462 Loss 1 0.891831 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401402EN male - FSRW48279 10 17938195 18036656 98462 Loss 1 0.905514 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401385BB male - DQOA73385 10 17938195 18036656 98462 Loss 1 0.89357 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401592NR male - BOWS70612 10 17938195 18036656 98462 Loss 1 0.892582 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401975VD male - MRIL85955 10 17938195 18036656 98462 Loss 1 0.901285 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400705KK male - XZZR64566 10 17938195 18036656 98462 Loss 1 0.897462 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400996MC male - ETUR65669 10 17938195 18036656 98462 Loss 1 0.881514 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401056TJ male - VDRD32700 10 17938195 18036656 98462 Loss 1 0.893389 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400271SR male - NWRU68440 10 17938195 18036656 98462 Loss 1 0.895247 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401064FR male - RBTV68848 10 17938195 18036656 98462 Loss 1 0.887887 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401182OC male - ZDRZ89201 10 17938195 18036656 98462 Loss 1 0.888606 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401855RE male - QVOH35939 10 17938195 18036656 98462 Loss 1 0.894315 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400291VJ male - INSC49339 10 17938195 18036656 98462 Loss 1 0.893584 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401334DH female - RAQB29487 10 17938195 18036656 98462 Loss 1 0.891278 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401746WW male - QPLK48897 10 17938195 18036656 98462 Loss 1 0.904454 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401730MS male - OULL87238 10 17938195 18036656 98462 Loss 1 0.910621 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401845MJ male - NOIN63241 10 17938195 18036656 98462 Loss 1 0.88653 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400641WJ female - YDHD10968 10 17938195 18036656 98462 Loss 1 0.886938 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401355CD male - QITC50272 10 17938195 18036656 98462 Loss 1 0.891148 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401012TP female - TNZB91328 10 17938195 18036656 98462 Loss 1 0.891462 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400911GA female - TGHP62000 10 17938195 18036656 98462 Loss 1 0.894998 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400882DD male - GVAB34760 10 17938195 18036656 98462 Loss 1 0.897166 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400453LN male - EGVC41637 10 17938195 18036656 98462 Loss 1 0.884047 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401939GD male - TDDJ68763 10 17938195 18036656 98462 Loss 1 0.896806 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401250WD female - KKRR12131 10 17938195 18036656 98462 Loss 1 0.894048 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401952UH male - UDNO19569 10 17938195 18036656 98462 Loss 1 0.889289 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401766MR male - DLYI64271 10 17938195 18036656 98462 Loss 1 0.880841 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401292ER female - STES59258 10 17938195 18036656 98462 Loss 1 0.88854 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401616WP female - CETD95374 10 17938195 18036656 98462 Loss 1 0.893289 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401331LJ female - FPLE23103 10 17938195 18036656 98462 Loss 1 0.895074 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400337HG male - PNEQ37885 10 17938195 18036656 98462 Loss 1 0.899725 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401781SL male - CBBY76424 10 17938195 18036656 98462 Loss 1 0.909674 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401927SK female - IJLN67055 10 17938195 18036656 98462 Loss 1 0.900923 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400982BS female - WXKO33327 10 17938195 18036656 98462 Loss 1 0.891413 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400496BL female - UUMD32389 10 17938195 18036656 98462 Loss 1 0.887904 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400609FJ male - JPEZ22320 10 17938195 18036656 98462 Loss 1 0.89611 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401149VA male - OTMU34006 10 17938195 18036656 98462 Loss 1 0.896825 8 14066 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 50001(1|clone) MRC1 1 MRC1 1 - - - - - 49 6 - 0 "98462(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 402038MR male - RNZZ40210 13 95939873 96038320 98448 Gain 3 0.892899 79 1262 chas 67.49 Gain 74.75 Gain 0 - GainGain- 76 NA NA NA "ChAS,IPN,NXS" 13q32.1 - ABCC4 1 ABCC4 1 - - - "72947(10|Conrad(2009),Matsuzaki(2009),McKernan(2009),Kidd(2008),Park(2010),Shaikh(2009))" 1190(2|Matsuzaki(2009)) - 76 - 0 "98448(33|Conrad(2009),Jakobsson(2008),Pinto(2011),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" ABWI37104 2 98063359 98161697 98339 Loss 1 0.903251 17 6146 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "98339(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "98339(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401200BD male - FSQK31243 3 162528531 162626676 98146 Loss 1 0.907938 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 12.09 Loss GTC "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400863SS female research_filter QGND60775 3 162528531 162626676 98146 Loss 1 0.915 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 12.09 Loss GTC "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401085LA_1 female research_filter UBKP24592 3 162528531 162626676 98146 Loss 1 0.930585 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401513KC male research_filter VGND49817 3 162528531 162626676 98146 Loss 1 0.917697 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401735LE male research_filter GDZR23108 3 162528531 162626676 98146 Loss 1 0.916884 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400375KA female research_filter KQIO31508 3 162528531 162626676 98146 Loss 1 0.933909 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400507VD male research_filter WTDT99871 3 162528531 162626676 98146 Loss 1 0.922363 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401505WI male research_filter EGVC41637 3 162528531 162626676 98146 Loss 1 0.937599 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401939GD male research_filter TDDJ68763 3 162528531 162626676 98146 Loss 1 0.930749 8 14020 chas 0 - 15.77 Loss 0 - -Loss- 63 NA NA NA "ChAS,NXS" 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401250WD female research_filter GTRU40344 3 162528531 162626676 98146 Loss 1 0.918874 8 14020 chas 0 - 0 - 0 - --- 63 12.09 Loss GTC ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400134WK_1 male - KSNB36135 3 162528531 162626676 98146 Loss 1 0.902212 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401677MM female - GWDY85049 3 162528531 162626676 98146 Loss 1 0.938751 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401093VL female - RJEG79563 3 162528531 162626676 98146 Loss 1 0.922985 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401543DC male - KAAS48951 3 162528531 162626676 98146 Loss 1 0.916805 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401504RJ male - LELT20618 3 162528531 162626676 98146 Loss 1 0.921621 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400211BJ female - JWHR52164 3 162528531 162626676 98146 Loss 1 0.929085 8 14020 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 3q26.1 - - 0 - 0 - - "24517(3|Pang(2010),Ahn(2009))" "98146(30|Conrad(2009),Altshuler(2010),Jakobsson(2008),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Park(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009))" 443(1|Park(2010)) - 63 - 0 "98146(251|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400984LD female - BRIY29802 13 64321539 64419658 98120 Gain 3 0.886357 58 1721 chas 36.77 Gain 47.73 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" 13q21.31 - - 0 - 0 - - 9475(1|Kidd(2008)) "98120(11|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 87 50 - 0 "98120(19|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" MQVK42355 13 64321539 64419658 98120 Gain 3 0.885355 58 1721 chas 0 - 40.16 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 13q21.31 - - 0 - 0 - - 9475(1|Kidd(2008)) "98120(11|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 87 50 - 0 "98120(19|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401203MP female "research_filter, clinical_filter" XMEG92101 5 26125816 26223932 98117 Gain 3 0.896099 56 1783 chas 98.81 Gain 100 Gain 98.26 Gain GainGainGain 53 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p14.1 - - 0 - 0 - - 1827(1|Ahn(2009)) 3915(2|Matsuzaki(2009)) - 7 53 - 0 "98117(11|Ahn(2009),Wong(2007),Levy(2007),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" JDGZ96096 3 60518504 60616457 97954 Loss 1 0.924889 167 590 chas 100 Loss 92.25 Loss 92.26 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.2 - FHIT 1 FHIT 1 - - - 24422(4|Matsuzaki(2009)) 558(1|McKernan(2009)) - 113 FHIT#asd_candidate 1 "97954(12|Teague(2010),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401482CB male "research_filter, clinical_filter" JITZ20982 14 63766974 63864884 97911 Gain 3 0.886831 113 874 chas 64.8 Gain 72.96 Gain 99.98 Gain GainGainGain 76 NA NA NA "ChAS,IPN,NXS,PTK" 14q23.2 - "PPP2R5E,GPHB5" 2 "PPP2R5E,GPHB5" 2 - - - "97911(5|Itsara(2009),McKernan(2009),Pinto(2007),Shaikh(2009))" "784(3|Ahn(2009),Bentley(2008),Mills(2006))" 5 76 - 0 "97911(32|Ahn(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401180GR male "research_filter, clinical_filter" EZOV24426 7 108194673 108292436 97764 Loss 1 0.933686 92 1074 chas 97.02 Loss 96.05 Loss 97.17 Loss LossLossLoss 68 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.1 - "DNAJB9,THAP5" 2 "DNAJB9,THAP5" 2 - - - - - 3 68 - 0 "91866(7|Pinto(2011),Banerjee(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400454RE male "research_filter, clinical_filter" VIXQ67410 6 68508999 68606744 97746 Gain 3 0.892505 63 1576 chas 85.34 Gain 92.67 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" 6q12 - - 0 - 0 - - - "67398(3|Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "97746(13|Itsara(2009),Pinto(2007),Redon(2006),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" YDIQ26421 16 34567199 34664881 97683 Gain 3 0.896994 48 2078 chas 83.29 Gain 68.17 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" "16p11.1,16p11.2" - LOC283914 1 LOC283914 1 - - 97683(1|Kidd(2008)) "97683(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - - 61 - 0 "97683(69|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2010b),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401591BE female research_filter XUUY89365 11 51377161 51474835 97675 Gain 3 0.887121 124 794 chas 49.31 Gain 0 - 100 Gain Gain-Gain 63 NA NA NA "ChAS,IPN,PTK" 11p11.12 - OR4A5 1 OR4A5 1 - - - "97675(3|Itsara(2009),Pinto(2007),Shaikh(2009))" - 100 63 - 0 "97675(15|Pinto(2011),Itsara(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" BDQN41691 7 15488735 15586378 97644 Gain 3 0.899259 120 820 chas 89.56 Gain 99.68 Gain 100 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.2 - AGMO 1 AGMO 1 - - - 44638(1|Shaikh(2009)) - - 73 - 0 "65772(14|Pinto(2011),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401602PR male "research_filter, clinical_filter" DZXP20142 5 177157387 177254952 97566 Gain 4 0.918122 18 5739 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "97566#1%""Sotos syndrome"":2326144" - "97566(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 8 - 0 "97566(37|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400838AM female - UDNO19569 14 22842605 22940138 97534 Gain 3 0.88089 120 819 chas 0 - 57.57 Gain 100 Gain #NAME? 70 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "97534(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 70 - 0 "97534(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401766MR male "research_filter, clinical_filter" VZCC67569 1 231715775 231813307 97533 Gain 3 0.898376 160 613 chas 60.62 Gain 89.71 Gain 100 Gain GainGainGain 56 NA NA NA "ChAS,IPN,NXS,PTK" 1q42.2 - "DISC1,LOC100287814,TSNAX-DISC1" 3 "DISC1,LOC100287814,TSNAX-DISC1" 3 DISC1 - - "97533(4|Redon(2006),Shaikh(2009),Perry(2008))" - - 55 DISC1#asd_candidate 1 "97533(10|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" FOMC40154 7 38293950 38391352 97403 Gain 3 0.87516 100 983 chas 0 - 42.11 Gain 0 - -Gain- 122 0 - - "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "97403(33|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 122 - 0 "97403(97|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 401096SL male "research_filter, clinical_filter" YBSU20689 3 8659291 8756423 97133 Loss 1 0.904598 122 802 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" "3p25.3,3p26.1" - C3orf32 1 C3orf32 1 - - - "32437(2|Conrad(2009),McKernan(2009))" "979(4|Wang(2008),Levy(2007),Bentley(2008))" 13 73 - 0 "58483(27|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401278DM female "research_filter, clinical_filter" EIKI77114 3 110467292 110564311 97020 Gain 3 0.897422 53 1865 chas 81.1 Gain 90.88 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 3q13.13 - - 0 - 0 - - - - - - 56 - 0 "76575(7|Teague(2010),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" GVAB34760 18 62989356 63086360 97005 Loss 1 0.931366 66 1492 chas 94.42 Loss 97.05 Loss 97.05 Loss LossLossLoss 69 NA NA NA "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - - - - 2 69 - 0 "8369(13|Pang(2010),Levy(2007),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" GQXG36971 22 18398976 18495947 96972 Gain 3 0.891855 88 1114 chas 0 - 95.84 Gain 0 - -Gain- 69 95.2 Gain "BS,GTC,IP6" "ChAS,NXS" 22q11.21 - "MICAL3,MIR648" 2 MIR648 1 - "96972#1%""Cat-Eye Syndrome (Type I)"":18591860" - "1927(5|Conrad(2009),Matsuzaki(2009))" 946(1|Matsuzaki(2009)) 16 69 - 0 "96972(12|Banerjee(2011),Wong(2007),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" UJRI14149 4 1034862 1131809 96948 Gain 3 0.891578 160 609 chas 69.28 Gain 85.73 Gain 99.29 Gain GainGainGain 70 92.53 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 4p16.3 - "TMED11P,RNF212" 2 "TMED11P,RNF212" 2 RNF212 "96948#1%""Wolf-Hirschhorn Syndrome"":2073670" - "96948(12|Park(2010),Conrad(2009),Jakobsson(2008),Matsuzaki(2009))" "2378(9|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Mills(2006))" - 70 - 0 "96948(77|Conrad(2009),Wong(2007),Jakobsson(2008),Levy(2007),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Park(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400227MM female "research_filter, clinical_filter" IWRE15730 14 42922940 43019803 96864 Loss 1 0.915714 67 1467 chas 94.58 Loss 97.25 Loss 99.78 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.1 - - 0 - 0 - - - "58090(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Ju(2010),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),McCarroll(2008))" "541(2|Matsuzaki(2009),Perry(2008))" - 59 - 0 "85890(50|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" CBBY76424 10 119002069 119098898 96830 Gain 3 0.9065 108 904 chas 91.45 Gain 92.27 Gain 95.06 Gain GainGainGain 78 NA NA NA "ChAS,IPN,NXS,PTK" 10q25.3 - "SLC18A2,PDZD8" 2 "SLC18A2,PDZD8" 2 - - - "21604(3|Pang(2010),Wheeler(2008),McKernan(2009))" 821(1|Park(2010)) - 78 - 0 "47047(9|Wong(2007),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Park(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401927SK female "research_filter, clinical_filter" DBFY56089 15 43888262 43984930 96669 Loss 1 0.883092 76 1288 chas 80.92 Loss 20.89 Loss 52.41 Loss LossLossLoss 25 52.29 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "96669(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "96669(41|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400458LS female "research_filter, clinical_filter" KGUZ66103 15 43888262 43984930 96669 Loss 1 0.87009 76 1288 chas 36.77 Loss 16.91 Loss 0 - LossLoss- 25 NA NA NA "ChAS,IPN,NXS" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "96669(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "96669(41|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401596PJ male "research_filter, clinical_filter" GEZQ95890 15 43888262 43984930 96669 Gain 3 0.874273 76 1288 chas 0 - 18.03 Gain 0 - -Gain- 25 100 Gain "BS,IP6" "ChAS,NXS" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "96669(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "96669(41|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" KGYY91251 12 47949003 48045648 96646 Gain 4 0.934482 72 1361 chas 100 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.11 - - 0 - 0 - - - "96646(2|Pinto(2007),Zogopoulos(2007))" 1(1|Mills(2006)) - 60 - 0 "96646(8|Kidd(2008),Levy(2007),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401348RB male "research_filter, clinical_filter" UHIX56739 X 47865295 47961888 96594 Gain 3 0.900871 92 1061 chas 89.8 Gain 0 - 0 - Gain-- 69 75.6 Gain "GTC,IP6" "ChAS,IPN" Xp11.23 - "SPACA5B,SPACA5,ZNF630" 3 "SPACA5B,SPACA5,ZNF630" 3 - - 22802(1|Ahn(2009)) "96594(32|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 615(1|Mills(2006)) 25 69 - 0 "96594(47|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sharp(2005),Wang(2007),Pinto(2007),Durbin(2010),McCarroll(2006),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401040KM female "research_filter, clinical_filter" APOV19283 3 1813333 1909727 96395 Loss 1 0.912921 88 1107 chas 100 Loss 92.74 Loss 96.57 Loss LossLossLoss 102 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.3 - - 0 - 0 - - - "28774(3|Kidd(2008),Pinto(2007),Simon-Sanchez(2007))" 1(1|Levy(2007)) - 102 - 0 "96395(18|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" XTPE89033 7 38294983 38391352 96370 Gain 3 0.868839 98 993 chas 0 - 44.04 Gain 0 - -Gain- 120 0 - - "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "96370(33|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 120 - 0 "96370(95|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400817MB male "research_filter, clinical_filter" PTGD86385 7 38294983 38391352 96370 Gain 3 0.883123 98 993 chas 0 - 57.51 Gain 0 - -Gain- 120 NA NA NA "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "96370(33|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 120 - 0 "96370(95|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401262RR male "research_filter, clinical_filter" NFNX93095 19 5312249 5408215 95967 Gain 3 0.896522 46 2132 chas 64.29 Gain 75.52 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 19p13.3 - PTPRS 1 PTPRS 1 - - - - - - 55 - 0 "95967(7|Teague(2010),Wong(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401318AV female research_filter TAVH54072 11 51183549 51279400 95852 Loss 1 0.883813 24 4167 chas 0 - 0 - 100 Loss #NAME? 32 NA NA NA "ChAS,PTK" 11p11.12 - - 0 - 0 - - - "95852(8|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" 463(1|Wang(2008)) - 32 - 0 "95852(48|Ju(2010),Conrad(2009),Wang(2008),Durbin(2010),Locke(2006),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400948EV female research_filter KKJQ91569 14 22848656 22944507 95852 Loss 1 0.8628 136 710 chas 0 - 75.4 Loss 100 Loss #NAME? 82 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "95852(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 82 - 0 "95852(93|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400258BC female "research_filter, clinical_filter" ZEGT44347 15 43889175 43984930 95756 Gain 3 0.876364 72 1348 chas 11.51 Gain 46.12 Gain 0 - GainGain- 25 NA NA NA "ChAS,IPN,NXS" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "95756(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "95756(41|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401609MB female "research_filter, clinical_filter" CKLN80228 10 18127910 18223634 95725 Loss 1 0.869848 20 5038 chas 0 - 0 - 79.32 Loss #NAME? 9 0 - - "ChAS,PTK" 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400695PH female research_filter ZIPB72793 10 18127910 18223634 95725 Loss 1 0.879253 20 5038 chas 0 - 0 - 0 - --- 9 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401889FR male - OAZH14211 10 18127910 18223634 95725 Loss 1 0.873032 20 5038 chas 0 - 0 - 0 - --- 9 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400246MG male - FRXS36515 10 18127910 18223634 95725 Loss 1 0.886573 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400769SL female - RNZZ40210 10 18127910 18223634 95725 Loss 1 0.879628 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401940SJ male - TDCE32526 10 18127910 18223634 95725 Loss 1 0.874123 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400583HS male - XROV61149 10 18127910 18223634 95725 Loss 1 0.886499 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401480PG male - WGSV83254 10 18127910 18223634 95725 Loss 1 0.88576 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401733CG male - FGIX67905 10 18127910 18223634 95725 Loss 1 0.890877 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401391PJ male - NKNM36178 10 18127910 18223634 95725 Loss 1 0.882772 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400668TD male - DVRF47676 10 18127910 18223634 95725 Loss 1 0.883195 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401847RK male - WYNE83745 10 18127910 18223634 95725 Loss 1 0.88907 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401844ZD male - VUUO47049 10 18127910 18223634 95725 Loss 1 0.887451 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400533BB female - JWHR52164 10 18127910 18223634 95725 Loss 1 0.898563 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400984LD female - HHAT36498 10 18127910 18223634 95725 Loss 1 0.869966 20 5038 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95725(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400574MA female - QITC50272 X 89752140 89847838 95699 Loss 1 0.865106 32 3087 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - - - 100 24 - 0 95699(1|Redon(2006)) TRUE TRUE ipn_no algo_no NA 401012TP female clinical_filter VIXQ67410 8 43621892 43717568 95677 Loss 1 0.91678 26 3827 chas 100 Loss 38.75 Loss 100 Loss LossLossLoss 19 NA NA NA "ChAS,IPN,NXS,PTK" 8p11.1 - - 0 - 0 - - - "95677(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 19 - 0 "95677(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" MLXC26947 3 87854277 87949918 95642 Loss 1 0.904767 55 1771 chas 100 Loss 100 Loss 100 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" "3p11.2,3p11.1" - - 0 - 0 - - - "19607(6|Conrad(2009),McCarroll(2008),Altshuler(2010),Matsuzaki(2009))" - - 48 - 0 "95642(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Altshuler(2010),Campbell(2011),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" AGIM53957 12 80632583 80728211 95629 Loss 1 0.914208 63 1542 chas 96.67 Loss 99.73 Loss 100 Loss LossLossLoss 50 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.31 - OTOGL 1 OTOGL 1 - - - - - 1 50 - 0 "95629(6|Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400564SN female "research_filter, clinical_filter" FXID76383 19 55252034 55347661 95628 Loss 1 0.906504 32 3084 chas 36.86 Loss 65.81 Loss 82.23 Loss LossLossLoss 38 66.18 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "95628(49|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 38 - 0 "95628(143|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" TFBW53379 19 55252034 55347661 95628 Loss 1 0.894536 32 3084 chas 36.86 Loss 32.03 Loss 0 - LossLoss- 38 83.08 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "95628(49|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 38 - 0 "95628(143|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" ICCB48361 1 9304205 9399793 95589 Gain 3 0.898407 82 1180 chas 100 Gain 87.99 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "83947(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 60 - 0 "95589(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401258PC female "research_filter, clinical_filter" YPPO84595 19 55283916 55379503 95588 Loss 1 0.889486 54 1803 chas 36.87 Loss 60.65 Loss 0 - LossLoss- 51 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "95588(53|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 51 - 0 "95588(130|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" VBEF49630 20 19782529 19878099 95571 Loss 1 0.921827 88 1098 chas 97.65 Loss 99.67 Loss 99.67 Loss LossLossLoss 102 NA NA NA "ChAS,IPN,NXS,PTK" 20p11.23 - RIN2 1 RIN2 1 RIN2 - - "7651(2|Wang(2007),Matsuzaki(2009))" 968(4|Matsuzaki(2009)) - 102 - 0 "82393(12|Wang(2007),Wong(2007),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" CAEK98371 X 127624954 127720505 95552 Loss 0 0.959112 39 2514 chas 86.89 Loss 0 - 0 - Loss-- 39 90.51 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - - - - 39 - 0 "44362(5|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" RCQQ88896 18 18529340 18624860 95521 Gain 3 0.907292 168 571 chas 94.1 Gain 87.88 Gain 99.78 Gain GainGainGain 35 99.99 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q11.1 - ROCK1 1 ROCK1 1 - - - - - 11 35 - 0 "27270(6|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" DQHB62647 11 50477704 50573143 95440 Loss 1 0.916691 19 5302 chas 0 - 99.99 Loss 100 Loss #NAME? 9 NA NA NA "ChAS,NXS,PTK" 11p11.12 - - 0 - 0 - - - "95440(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 9 - 0 "95440(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401732HW male research_filter VIXQ67410 11 50477704 50573143 95440 Loss 1 0.910354 19 5302 chas 0 - 34.02 Loss 0 - -Loss- 9 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "95440(6|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009))" - - 9 - 0 "95440(24|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401297KC male research_filter TGGX58243 10 18128235 18223634 95400 Loss 1 0.883418 18 5611 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95400(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400942HR male - JKIG25467 10 18127910 18223303 95394 Loss 1 0.89007 18 5611 chas 0 - 0 - 0 - --- 9 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 98 9 - 0 "95394(9|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400645KM male - TLUK35377 14 22849165 22944507 95343 Loss 1 0.858737 134 716 chas 0 - 0 - 0 - --- 82 0 - - ChAS 14q11.2 - - 0 - 0 - - - "95343(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 82 - 0 "95343(93|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400053LE female clinical_filter IDVO19613 19 55252034 55347329 95296 Loss 1 0.876364 31 3176 chas 68.12 Loss 78.42 Loss 91.04 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "95296(49|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 37 - 0 "95296(142|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401434VN female "research_filter, clinical_filter" KKFR54086 1 9304745 9399922 95178 Gain 3 0.895758 81 1189 chas 77.03 Gain 88.51 Gain 88.51 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "84076(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 57 - 0 "95178(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401443JK male "research_filter, clinical_filter" ZZDG28391 1 246772019 246867192 95174 Gain 3 0.899275 88 1093 chas 91.06 Gain 93.32 Gain 93.49 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - CNST 1 CNST 1 - - - 605(1|Pang(2010)) "493(2|Levy(2007),McKernan(2009))" 2 61 - 0 "95174(9|Pang(2010),Teague(2010),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" RYTQ14327 22 22460755 22555870 95116 Loss 1 0.849257 84 1145 chas 75.63 Loss 0 - 0 - Loss-- 212 97.75 Loss "BS,GTC,IP6" "ChAS,IPN" 22q11.22 - - 0 - 0 - "95116#1%""22q11.2 distal deletion syndrome"":1580382" - "95116(37|Wang(2007),Matsuzaki(2009),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Shaikh(2009),Park(2010),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "887(2|Park(2010),Ahn(2009))" 6 212 - 0 "95116(161|Wang(2007),Ahn(2009),Teague(2010),Itsara(2009),Locke(2006),Durbin(2010),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Park(2010),Pinto(2011),Kim(2009),McCarroll(2006),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" CQAD90614 1 120695996 120791084 95089 Loss 1 0.922167 8 13584 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 1p11.2 50001(1|clone) - 0 - 0 - - - 36482(2|Conrad(2009)) - 47 3 - 0 "95089(18|Conrad(2009),Wong(2007),Redon(2006),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401346FJ female - KHBO80872 19 55252034 55347117 95084 Loss 1 0.884225 30 3278 chas 37.07 Loss 82.13 Loss 0 - LossLoss- 35 66.55 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "95084(49|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" 192(1|Mills(2006)) 100 35 - 0 "95084(141|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400718PS male "research_filter, clinical_filter" FEZX98083 14 22848656 22943736 95081 Loss 1 0.846738 134 714 chas 0 - 0 - 0 - --- 81 0 - - ChAS 14q11.2 - - 0 - 0 - - - "95081(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 81 - 0 "95081(91|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400106PC male clinical_filter WHOU87472 1 9304745 9399793 95049 Gain 3 0.893645 80 1203 chas 49.97 Gain 50.05 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "83947(7|Itsara(2009),Conrad(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 57 - 0 "95049(19|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" CLWS25417 6 29841021 29936041 95021 Loss 1 0.890648 34 2879 chas 36.97 Loss 33.56 Loss 61.89 Loss LossLossLoss 65 43.65 "Gain,Loss" IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "95021(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 41 65 - 0 "95021(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401661HD male "research_filter, clinical_filter" QDNW53844 6 29841021 29936041 95021 Loss 1 0.89487 34 2879 chas 22.15 Loss 35.72 Loss 49.18 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "95021(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 41 65 - 0 "95021(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" TAVH54072 6 29841021 29936041 95021 Loss 1 0.895322 34 2879 chas 22.15 Loss 21.89 Loss 0 - LossLoss- 65 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "95021(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 41 65 - 0 "95021(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400948EV female "research_filter, clinical_filter" GVAB34760 6 29841021 29936041 95021 Loss 1 0.891194 34 2879 chas 46.88 Loss 0 - 0 - Loss-- 65 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "95021(71|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 41 65 - 0 "95021(395|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" NKHQ61532 13 101123614 101218600 94987 Gain 3 0.899701 186 513 chas 99.65 Gain 99.83 Gain 99.83 Gain GainGainGain 67 99.65 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q32.3 - "PCCA,A2LD1" 2 "PCCA,A2LD1" 2 PCCA - 94987(1|Kidd(2008)) 5448(1|Park(2010)) - - 67 - 0 "94987(4|Park(2010),Kidd(2008),Durbin(2010),Teague(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" QGND60775 19 55283916 55378686 94771 Loss 1 0.883363 50 1934 chas 41.34 Loss 50.69 Loss 100 Loss LossLossLoss 49 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "94771(53|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 49 - 0 "94771(130|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401085LA_1 female "research_filter, clinical_filter" AGIM53957 14 22848656 22943215 94560 Loss 1 0.863966 131 727 chas 0 - 0 - 0 - --- 74 0 - - ChAS 14q11.2 - - 0 - 0 - - - "94560(20|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 74 - 0 "94560(90|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400564SN female clinical_filter OWBB95825 11 55374019 55468511 94493 Gain 3 0.881368 108 883 chas 0 - 87.95 Gain 95.38 Gain #NAME? 69 0 - - "ChAS,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "93449(2|Kidd(2008),Korbel(2007))" "94493(76|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 69 - 0 "94493(761|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401275SJ male "research_filter, clinical_filter" AZMC27188 16 8735581 8830022 94442 Gain 3 0.908879 120 793 chas 100 Gain 95.62 Gain 100 Gain GainGainGain 78 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.2 - "METTL22,ABAT" 2 "METTL22,ABAT" 2 ABAT - - "14515(4|Itsara(2009),Conrad(2009),Shaikh(2009),Mills(2006))" "692(6|Park(2010),Matsuzaki(2009))" - 78 - 0 "94442(44|Conrad(2009),Itsara(2009),Durbin(2010),Park(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" BWEV96807 7 38292663 38387020 94358 Loss 1 0.862628 100 953 chas 0 - 31.36 Loss 99.89 Loss #NAME? 121 NA NA NA "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "94358(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 121 - 0 "94358(84|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402012RR male "research_filter, clinical_filter" AXWL27269 5 37629259 37723615 94357 Loss 1 0.911258 88 1084 chas 98.21 Loss 98.99 Loss 98.98 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.2 - WDR70 1 WDR70 1 - - - - - - 45 - 0 1348(4|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401962BK female "research_filter, clinical_filter" EGYT92211 10 115357952 115452305 94354 Gain 3 0.903033 112 850 chas 78.2 Gain 97.22 Gain 97.22 Gain GainGainGain 80 NA NA NA "ChAS,IPN,NXS,PTK" 10q25.3 - "CASP7,NRAP" 2 "CASP7,NRAP" 2 - - - 4639(1|Conrad(2009)) - - 80 - 0 "94354(10|Kidd(2008),Durbin(2010),Shaikh(2009),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 401402EN male "research_filter, clinical_filter" NFIA96453 11 55374176 55468511 94336 Gain 3 0.876678 104 915 chas 0 - 73.09 Gain 0 - -Gain- 67 72.22 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "93292(2|Kidd(2008),Korbel(2007))" "94336(76|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "94336(761|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400069CN female "research_filter, clinical_filter" NUHG48677 13 20230525 20324766 94242 Gain 3 0.887875 88 1083 chas 71.23 Gain 100 Gain 0 - GainGain- 48 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 13q12.11 - "MPHOSPH8,PSPC1" 2 "MPHOSPH8,PSPC1" 2 - - - "94242(2|Park(2010),Shaikh(2009))" - 23 48 - 0 "94242(15|Park(2010),Itsara(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 40050SB female "research_filter, clinical_filter" QTRF59074 8 69725671 69819908 94238 Gain 3 0.908323 64 1495 chas 83.06 Gain 97.2 Gain 0 - GainGain- 68 91.52 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 8q13.2 - C8orf34 1 C8orf34 1 - - - 1540(1|Pang(2010)) 4(4|Levy(2007)) - 68 - 0 "92320(21|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" AXWL27269 5 177166127 177260317 94191 Gain 3 0.893894 20 4957 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "94191#1%""Sotos syndrome"":2326144" - "94003(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 9 - 0 "94191(38|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401962BK female - AEJP39672 7 38292663 38386791 94129 Gain 3 0.887515 98 970 chas 0 - 71.22 Gain 0 - -Gain- 120 NA NA NA "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "94129(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 120 - 0 "94129(81|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401234MB male "research_filter, clinical_filter" JPSN96941 7 38292663 38386791 94129 Gain 3 0.886915 98 970 chas 0 - 52.77 Gain 0 - -Gain- 120 NA NA NA "ChAS,NXS" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "94129(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 120 - 0 "94129(81|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401612HB male "research_filter, clinical_filter" SFLX52247 21 44288909 44382826 93918 Loss 1 0.90839 92 1032 chas 99.85 Loss 99.92 Loss 99.92 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 21q22.3 - "NDUFV3,WDR4" 2 "NDUFV3,WDR4" 2 - - - - "799(4|Levy(2007),McKernan(2009),Mills(2006))" 2 47 "NDUFV3#asd_candidate,WDR4#asd_candidate" 2 "88998(11|McKernan(2009),Wong(2007),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" ZRKC95930 X 89730585 89824303 93719 Loss 1 0.873717 32 3023 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - - - 100 24 - 0 "93719(3|Teague(2010),Redon(2006))" TRUE TRUE ipn_no algo_no NA 400242TP female clinical_filter VABQ19693 14 22844970 22938641 93672 Gain 3 0.873444 113 836 chas 0 - 89.82 Gain 0 - -Gain- 67 93.41 Gain GTC "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "93672(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 67 - 0 "93672(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" GNZH35610 17 36311009 36404555 93547 Loss 1 0.911188 26 3741 chas 0 - 57.77 Loss 0 - -Loss- 1 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93547(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93547(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_yes NA 402029KJ male "research_filter, clinical_filter" QMCQ87044 17 36311009 36404555 93547 Gain 4 0.941462 26 3741 chas 0 - 100 Gain 0 - -Gain- 1 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93547(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93547(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400152MR male research_filter PEZC72297 17 36311009 36404555 93547 Gain 4 0.955241 26 3741 chas 0 - 100 Gain 0 - -Gain- 1 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93547(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93547(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400298ME male research_filter ZKED26020 14 22837283 22930808 93526 Loss 1 0.867278 88 1075 chas 0 - 0 - 0 - --- 62 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "93526(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 62 - 0 "93526(89|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401652HL female clinical_filter BTMS28214 6 142142454 142235948 93495 Loss 1 0.928453 66 1438 chas 100 Loss 100 Loss 100 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 6q24.1 - - 0 - 0 - - 69345(2|Kidd(2008)) - - - 66 - 0 "93495(9|Itsara(2009),Kidd(2008),Wong(2007),Durbin(2010),Kidd(2010b))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" VHVH83554 14 22844970 22938398 93429 Loss 1 0.858758 112 841 chas 0 - 39.89 Loss 100 Loss #NAME? 66 100 Loss IP6 "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "93429(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 66 - 0 "93429(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" XDYS74119 10 18106430 18199801 93372 Loss 1 0.885427 21 4668 chas 0 - 0 - 0 - --- 11 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 100 10 - 0 "93372(9|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 401019MP female - UJRI14149 10 18106430 18199800 93371 Loss 1 0.886831 20 4914 chas 0 - 0 - 0 - --- 10 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 100 10 - 0 "93371(9|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no affy6_no 400227MM female - FCIS19557 12 52688483 52781851 93369 Gain 3 0.907559 146 643 chas 99.99 Gain 99.86 Gain 99.86 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.13 - "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT85,KRT86" - - "93369(12|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Park(2010))" - 5 112 - 0 "93369(75|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401931JL female "research_filter, clinical_filter" PDHC59420 Y 7962325 8055684 93360 Loss 0 0.84309 43 2222 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" Yp11.2 - - 0 - 0 - - - - - 8 48 - 0 "93360(3|Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" KKFR54086 1 1559466 1652775 93310 Gain 3 0.899757 26 3732 chas 100 Gain 0 - 0 - Gain-- 14 NA NA NA "ChAS,IPN" 1p36.33 - "MIB2,CDK11A,CDK11B,MMP23B,MMP23A,SLC35E2B" 6 "MIB2,CDK11A,CDK11B,MMP23B,MMP23A,SLC35E2B" 6 - "93310#1%""1p36 microdeletion syndrome"":5408761" - "93310(14|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Levy(2007),McCarroll(2008),Park(2010))" "1318(4|Levy(2007),Ahn(2009),Mills(2006))" 68 14 - 0 "93310(60|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" FALSE TRUE ipn_yes algo_yes NA 401443JK male research_filter RXUT32164 17 33676494 33769794 93301 Loss 1 0.894973 72 1314 chas 81.51 Loss 92.93 Loss 95.91 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "84165(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 16 44 - 0 "93301(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401813DN female "research_filter, clinical_filter" AOYC46859 6 95473773 95567067 93295 Loss 1 0.924136 76 1243 chas 92.59 Loss 96.25 Loss 100 Loss LossLossLoss 72 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "93295(6|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 72 - 0 "93295(14|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400307HW male "research_filter, clinical_filter" IAQN76409 8 2231762 2324956 93195 Gain 3 0.893581 60 1579 chas 43.32 Gain 97.11 Gain 0 - GainGain- 145 NA NA NA "ChAS,IPN,NXS" 8p23.2 - - 0 - 0 - - "93195(5|Pang(2010),Kidd(2008),Tuzun(2005))" "93195(45|Itsara(2009),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),McCarroll(2008),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" "426(4|Wang(2008),Pang(2010),Levy(2007),Mills(2006))" - 145 - 0 "93195(139|Teague(2010),Korbel(2007),Redon(2006),Wang(2008),Tuzun(2005),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" LMJA76842 12 52688671 52781851 93181 Gain 3 0.897753 144 651 chas 100 Gain 100 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.13 - "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT85,KRT86" - - "93181(12|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Park(2010))" - 5 112 - 0 "93181(75|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" MMSK97554 12 52688671 52781851 93181 Gain 3 0.895211 144 651 chas 100 Gain 97.63 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.13 - "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT85,KRT86" - - "93181(12|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Park(2010))" - 5 112 - 0 "93181(75|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401091HS male "research_filter, clinical_filter" ASYD11505 12 52688671 52781851 93181 Gain 3 0.897282 144 651 chas 100 Gain 99.86 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.13 - "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT85,KRT86" - - "93181(12|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Park(2010))" - 5 112 - 0 "93181(75|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402024BB male "research_filter, clinical_filter" UDNO19569 12 52688671 52781851 93181 Gain 3 0.912093 144 651 chas 100 Gain 99.86 Gain 100 Gain GainGainGain 112 NA NA NA "ChAS,IPN,NXS,PTK" 12q13.13 - "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT84,KRT85,KRT86" 4 "KRT83,KRT85,KRT86" - - "93181(12|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Pang(2010),Pinto(2007),Park(2010))" - 5 112 - 0 "93181(75|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401766MR male "research_filter, clinical_filter" YDLH53232 17 36311009 36404138 93130 Loss 1 0.890669 25 3880 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93130(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93130(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401691HA male clinical_filter DVRF47676 17 36311009 36404138 93130 Gain 4 0.950211 25 3880 chas 0 - 100 Gain 0 - -Gain- 1 NA NA NA "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93130(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93130(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401847RK male research_filter ICDL89338 17 36311009 36404136 93128 Loss 1 0.906237 24 4049 chas 0 - 72.62 Loss 0 - -Loss- 1 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93128(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93128(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400977SC female research_filter CLWS25417 17 36311009 36404136 93128 Loss 1 0.895052 24 4049 chas 0 - 58.09 Loss 0 - -Loss- 1 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93128(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93128(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401661HD male research_filter ZHGO36222 17 36311009 36404136 93128 Gain 4 0.939084 24 4049 chas 30.79 Gain 100 Gain 0 - GainGain- 1 NA NA NA "ChAS,IPN,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "93128(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "93128(112|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_yes algo_yes NA 401135CS female research_filter VWYL75938 2 241611345 241704450 93106 Gain 3 0.889026 44 2165 chas 0 - 0 - 0 - --- 28 NA NA NA ChAS 2q37.3 - "AQP12B,AQP12A,KIF1A" 3 "AQP12B,AQP12A,KIF1A" 3 KIF1A "93106#1%""2q37 monosomy"":3147784" 57151(2|Kidd(2008)) "93106(5|Conrad(2009),Jakobsson(2008),Shaikh(2009))" 187(1|Mills(2006)) 28 27 - 0 "93106(27|Conrad(2009),Jakobsson(2008),Kidd(2010b),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401006ES female - NRTH35283 5 46293310 46386380 93071 Loss 1 0.865374 28 3447 chas 0 - 0 - 0 - --- 17 0 - - ChAS 5p11 - - 0 - 0 - - - "93071(4|Conrad(2009),McKernan(2009),Shaikh(2009))" - - 16 - 0 "93071(27|Teague(2010),Conrad(2009),Wang(2008),McKernan(2009),Durbin(2010),Wilson(2010),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 401052BM female clinical_filter PVOR72227 5 107353897 107446819 92923 Loss 1 0.923617 88 1068 chas 89.26 Loss 95.38 Loss 95.38 Loss LossLossLoss 55 90.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.3 - FBXL17 1 FBXL17 1 - - - 1470(1|McKernan(2009)) - - 54 - 0 "14386(6|McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" ZZDG28391 3 17388862 17481759 92898 Loss 1 0.914216 92 1020 chas 97.43 Loss 98.71 Loss 98.71 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.3 - TBC1D5 1 TBC1D5 1 - - - - - - 44 - 0 87145(1|Jakobsson(2008)) TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" MLUO94199 3 21259435 21352263 92829 Gain 3 0.895309 64 1473 chas 87.72 Gain 53.47 Gain 0 - GainGain- 76 90.66 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "92829(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 76 - 0 "92829(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" IOGU88526 9 12008920 12101640 92721 Loss 1 0.924095 72 1305 chas 100 Loss 98.68 Loss 100 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "92721(28|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 71 - 0 "92721(43|Wang(2007),Jakobsson(2008),Perry(2008),Gusev(2009),Itsara(2009),Altshuler(2010),Conrad(2006),Durbin(2010),Kidd(2008),Pinto(2007),Shaikh(2009),Perry(2008b),Redon(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401623SN male "research_filter, clinical_filter" PQCI84759 14 22848656 22941375 92720 Loss 1 0.858615 128 730 chas 0 - 0 - 0 - --- 70 100 Loss GTC ChAS 14q11.2 - - 0 - 0 - - - "92720(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 70 - 0 "92720(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_yes 400076LC female clinical_filter FRXS36515 3 60210773 60303438 92666 Loss 1 0.915991 138 676 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 86 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.2 - FHIT 1 - 0 - - - "92666(5|McKernan(2009),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007))" - - 86 FHIT#asd_candidate 1 "92666(5|McKernan(2009),Wong(2007),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400769SL female "research_filter, clinical_filter" OWWR99794 5 101637781 101730438 92658 Gain 3 0.902327 74 1269 chas 99.45 Gain 100 Gain 100 Gain GainGainGain 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - SLCO6A1 1 SLCO6A1 1 - - - 28515(1|Shaikh(2009)) - - 42 - 0 "92658(10|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" OBAS32636 5 101002559 101095165 92607 Gain 3 0.884102 53 1780 chas 88.75 Gain 44.17 Gain 0 - GainGain- 54 59.79 Gain "BS,IP6" "ChAS,IPN,NXS" 5q21.1 - - 0 - 0 - - - 2070(1|Conrad(2009)) - - 54 - 0 "92607(9|Conrad(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400249BC female "research_filter, clinical_filter" TBVD73320 8 43625199 43717800 92602 Loss 1 0.895398 26 3704 chas 0 - 38.31 Loss 0 - -Loss- 17 NA NA NA "ChAS,NXS" 8p11.1 - - 0 - 0 - - - "92602(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 17 - 0 "92602(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400712GC female "research_filter, clinical_filter" TAVH54072 8 43625199 43717800 92602 Loss 1 0.922129 26 3704 chas 0 - 99.96 Loss 100 Loss #NAME? 17 NA NA NA "ChAS,NXS,PTK" 8p11.1 - - 0 - 0 - - - "92602(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 17 - 0 "92602(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 400948EV female "research_filter, clinical_filter" HGZO79179 16 2645647 2738083 92437 Gain 3 0.901031 45 2100 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS 16p13.3 - "PDPK1,KCTD5,FLJ42627,ERVK13-1,LOC652276" 5 "PDPK1,KCTD5,FLJ42627,ERVK13-1,LOC652276" 5 - - - "92437(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 96 24 - 0 "92437(59|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401151RJ male - ISVP82924 11 50480771 50573143 92373 Loss 1 0.928509 16 6158 chas 100 Loss 100 Loss 0 - LossLoss- 8 NA NA NA "ChAS,IPN,NXS" 11p11.12 - - 0 - 0 - - - "92373(5|Itsara(2009),Pinto(2007),Shaikh(2009))" - - 8 - 0 "92373(20|Itsara(2009),Pinto(2011),Wong(2007),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401400NP male research_filter HAAE15834 8 43625199 43717568 92370 Loss 1 0.911779 24 4016 chas 100 Loss 100 Loss 0 - LossLoss- 16 NA NA NA "ChAS,IPN,NXS" 8p11.1 - - 0 - 0 - - - "92370(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 16 - 0 "92370(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401899MB male research_filter IOGU88526 8 43625199 43717568 92370 Loss 1 0.897823 24 4016 chas 0 - 100 Loss 0 - -Loss- 16 NA NA NA "ChAS,NXS" 8p11.1 - - 0 - 0 - - - "92370(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 16 - 0 "92370(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401623SN male research_filter SSWV37655 8 43625199 43717568 92370 Loss 1 0.908783 24 4016 chas 0 - 100 Loss 100 Loss #NAME? 16 NA NA NA "ChAS,NXS,PTK" 8p11.1 - - 0 - 0 - - - "92370(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 16 - 0 "92370(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401706BJ female research_filter LOOD16085 8 43625199 43717568 92370 Loss 1 0.88132 24 4016 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "92370(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 16 - 0 "92370(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400376SJ female - YTCX24219 8 43625199 43717568 92370 Loss 1 0.882933 24 4016 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "92370(13|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Ju(2010),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 16 - 0 "92370(24|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400502GS female - NFGH10073 1 46153072 46245423 92352 Gain 3 0.908538 76 1231 chas 94.77 Gain 97.37 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 1p34.1 - "IPP,TMEM69" 2 "IPP,TMEM69" 2 - - - "3564(5|Pang(2010),Conrad(2009),Korbel(2007),Matsuzaki(2009))" "856(5|Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" - 32 - 0 "25636(27|Conrad(2009),Korbel(2007),Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Itsara(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" TBVD73320 5 177114089 177206427 92339 Loss 1 0.878555 18 5431 chas 90.82 Loss 56.37 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 5q35.3 - FAM153A 1 FAM153A 1 - "92339#1%""Sotos syndrome"":2326144" - "92339(9|Conrad(2009),Matsuzaki(2009),de Smith(2007),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 13 - 0 "85731(22|Teague(2010),Conrad(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400712GC female research_filter XGQH24350 10 88883352 88975551 92200 Gain 3 0.878789 68 1376 chas 31.09 Gain 0 - 0 - Gain-- 25 NA NA NA "ChAS,IPN" 10q23.2 - FAM35A 1 FAM35A 1 - - - "92200(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" - 100 25 - 0 "92200(64|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Durbin(2010),Korbel(2007),Perry(2008b),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401215MJ female "research_filter, clinical_filter" ELXG87337 2 22512933 22605025 92093 Loss 1 0.923364 52 1805 chas 100 Loss 100 Loss 100 Loss LossLossLoss 62 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p24.1 - - 0 - 0 - - - "92093(7|Kim(2009),Matsuzaki(2009))" - - 62 - 0 "92093(6|Kim(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401634CH male "research_filter, clinical_filter" IOGU88526 5 46273327 46365391 92065 Loss 1 0.895551 20 4845 chas 0 - 99.95 Loss 0 - -Loss- 16 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "92065(14|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 16 - 0 "92065(53|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401623SN male research_filter EZDG77492 7 38294983 38387020 92038 Loss 1 0.872014 96 968 chas 0 - 0 - 68.21 Loss #NAME? 119 100 Loss "BS,GTC,IP6" "ChAS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "92038(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 119 - 0 "92038(82|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400308SP male "research_filter, clinical_filter" TTCB91135 7 38294983 38387020 92038 Loss 1 0.891567 96 968 chas 0 - 81.98 Loss 98.7 Loss #NAME? 119 NA NA NA "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "92038(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 119 - 0 "92038(82|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401376RD male "research_filter, clinical_filter" GNZH35610 7 38294983 38387020 92038 Loss 1 0.879174 96 968 chas 0 - 22.38 Loss 56.45 Loss #NAME? 119 NA NA NA "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "92038(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 25 119 - 0 "92038(82|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 402029KJ male "research_filter, clinical_filter" OBWN97941 12 38013106 38105138 92033 Loss 1 0.895174 14 7079 chas 0 - 88.35 Loss 0 - -Loss- 26 0 - - "ChAS,NXS" 12q11 - - 0 - 0 - - - "92033(20|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Ju(2010),Conrad(2009),Altshuler(2010),McKernan(2009),Ahn(2009),Pinto(2007),Cooper(2008),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" 93(1|Ahn(2009)) - 26 - 0 "92033(72|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Altshuler(2010),Conrad(2006),Durbin(2010),Simon-Sanchez(2007),Pinto(2007),Cooper(2008),Perry(2008b),Redon(2006),McKernan(2009),Ju(2010),Korbel(2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400113LD female research_filter ZRRL85494 5 24037139 24129004 91866 Loss 1 0.921309 60 1557 chas 99.99 Loss 87.94 Loss 97.55 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 5p14.2 - - 0 - 0 - - - 21404(1|Shaikh(2009)) "469(5|Wang(2008),Levy(2007),Wheeler(2008),Bentley(2008))" - 59 - 0 "91866(24|Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" APCZ69205 6 254254 346085 91832 Loss 1 0.864848 136 680 chas 41.23 Loss 0 - 0 - Loss-- 63 96.64 Loss "BS,GTC,IP6" "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "91832(17|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 62 - 0 "91832(55|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400970VE female "research_filter, clinical_filter" AEJP39672 17 33676494 33768199 91706 Loss 1 0.912775 71 1310 chas 82.93 Loss 95.63 Loss 95.63 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "84165(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 15 43 - 0 "91706(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401234MB male "research_filter, clinical_filter" BMGG13461 X 66636249 66727873 91625 Gain 3 0.916905 36 2617 chas 99.99 Gain 0 - 0 - Gain-- 35 99.33 Gain "BS,GTC,IP6" "ChAS,IPN" Xq12 - - 0 - 0 - - - "91625(5|McCarroll(2005),Wang(2007),Redon(2006),Shaikh(2009),Perry(2008))" - - 35 - 0 "91625(12|Wang(2007),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),McCarroll(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400002HK female research_filter RYUR49963 X 66636249 66727873 91625 Gain 2 0.928265 36 2617 chas 99.99 Gain 0 - 0 - Gain-- 35 99.33 Gain "BS,GTC,IP6" "ChAS,IPN" Xq12 - - 0 - 0 - - - "91625(5|McCarroll(2005),Wang(2007),Redon(2006),Shaikh(2009),Perry(2008))" - - 35 - 0 "91625(12|Wang(2007),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),McCarroll(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400177SJ male research_filter YDIQ26421 X 66636249 66727873 91625 Gain 3 0.89151 36 2617 chas 99.99 Gain 0 - 0 - Gain-- 35 NA NA NA "ChAS,IPN" Xq12 - - 0 - 0 - - - "91625(5|McCarroll(2005),Wang(2007),Redon(2006),Shaikh(2009),Perry(2008))" - - 35 - 0 "91625(12|Wang(2007),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),McCarroll(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401591BE female research_filter SLNP19984 6 95571045 95662616 91572 Loss 1 0.939299 52 1795 chas 85.33 Loss 92.51 Loss 92.51 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - 39237(1|Itsara(2009)) "1179(3|Wang(2008),Ahn(2009),Bentley(2008))" - 49 - 0 "91572(29|Ahn(2009),Jakobsson(2008),Itsara(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" LAJJ28425 10 4951758 5043328 91571 Loss 1 0.893353 104 889 chas 89.04 Loss 83.16 Loss 94.16 Loss LossLossLoss 70 89.05 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p15.1 - "tAKR,AKR1C1,AKR1C2" 3 "tAKR,AKR1C1,AKR1C2" 3 AKR1C2 - "56267(2|Kidd(2008),Ahn(2009))" 43980(4|Park(2010)) - 81 70 - 0 "73221(18|Park(2010),Kidd(2008),Ahn(2009),Levy(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400728PB female "research_filter, clinical_filter" MJBR37071 9 10816680 10908206 91527 Gain 3 0.909639 64 1452 chas 98.42 Gain 99.22 Gain 99.22 Gain GainGainGain 58 NA NA NA "ChAS,IPN,NXS,PTK" 9p23 - - 0 - 0 - - - "6438(2|Conrad(2009),Shaikh(2009))" "1562(3|Wang(2008),Park(2010),Ahn(2009))" - 58 - 0 "51608(20|Conrad(2009),Ahn(2009),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400570RW male "research_filter, clinical_filter" OEHV36421 16 70175863 70267377 91515 Loss 1 0.893232 18 5383 chas 0 - 56.54 Loss 0 - -Loss- 31 0 - - "ChAS,NXS" 16q22.1 - "LOC729513,PDPR,CLEC18C" 3 "LOC729513,PDPR,CLEC18C" 3 - - - "91515(26|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 83 31 - 0 "91515(129|Ju(2010),Korbel(2007),Redon(2006),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 401997HB male research_filter GEZQ95890 14 22848656 22940138 91483 Loss 1 0.849136 116 795 chas 0 - 0 - 0 - --- 68 100 Loss "BS,GTC,IP6" ChAS 14q11.2 - - 0 - 0 - - - "91483(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 68 - 0 "91483(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_yes 401487FW male clinical_filter YTOE66394 X 143560696 143652115 91420 Gain 2 0.952079 48 1945 chas 96.03 Gain 0 - 0 - Gain-- 55 NA NA NA "ChAS,IPN" Xq27.3 - - 0 - 0 - - - "9508(2|Park(2010),Conrad(2009))" - - 55 - 0 "36366(8|Park(2010),Conrad(2009),Durbin(2010),Kidd(2008))" FALSE TRUE ipn_yes algo_yes NA 401454CD male research_filter SUUF34898 22 50337809 50429207 91399 Loss 1 0.908722 8 13057 chas 0 - 0 - 0 - --- 1 0 - - ChAS 22q13.33 50001(1|contig) PIM3 1 PIM3 1 - - - 91399(1|Park(2010)) - - 1 - 0 "91399(9|Pinto(2011),Park(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400669LD male - GNMX63810 22 50337809 50429207 91399 Loss 1 0.905246 8 13057 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 22q13.33 50001(1|contig) PIM3 1 PIM3 1 - - - 91399(1|Park(2010)) - - 1 - 0 "91399(9|Pinto(2011),Park(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401067BD male - KTQJ52506 21 25218962 25310357 91396 Loss 1 0.941821 68 1364 chas 89.56 Loss 94.77 Loss 94.78 Loss LossLossLoss 82 NA NA NA "ChAS,IPN,NXS,PTK" 21q21.2 - - 0 - 0 - - - "91396(10|Conrad(2009),Matsuzaki(2009),McKernan(2009),Altshuler(2010),McCarroll(2008),Simon-Sanchez(2007))" "907(5|Levy(2007),McKernan(2009),Matsuzaki(2009))" - 82 - 0 "91396(46|Conrad(2009),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Altshuler(2010),Shaikh(2009),Pinto(2011),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400218WK female "research_filter, clinical_filter" QAGW25123 21 38394965 38486344 91380 Gain 3 0.896445 116 794 chas 95.54 Gain 92.54 Gain 97.76 Gain GainGainGain 54 88.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q22.13 - "PIGP,TTC3" 2 "PIGP,TTC3" 2 - - - 37657(1|Pinto(2007)) - - 54 - 0 "40204(6|Teague(2010),Durbin(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" HOIC14625 17 51931487 52022813 91327 Loss 1 0.927295 58 1602 chas 99.99 Loss 94 Loss 100 Loss LossLossLoss 59 97.28 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q22 - - 0 - 0 - - - - 1(1|Levy(2007)) - 59 - 0 "44976(3|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" JVBB89605 20 15053067 15144255 91189 Loss 1 0.92252 92 1002 chas 76.23 Loss 100 Loss 100 Loss LossLossLoss 91 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "34660(6|Jakobsson(2008),Matsuzaki(2009),Mills(2006))" "995(2|Levy(2007),McKernan(2009))" - 91 - 0 "91189(22|Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" JSHH93314 1 1352531 1443716 91186 Loss 1 0.891978 31 3039 chas 53.24 Loss 74.25 Loss 0 - LossLoss- 4 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "TMEM88B,ATAD3C,ATAD3B,ANKRD65,VWA1" 5 "TMEM88B,ATAD3C,ATAD3B,ANKRD65,VWA1" 5 - "91186#1%""1p36 microdeletion syndrome"":5408761" - "91186(4|Park(2010),Conrad(2009),Perry(2008))" 1(1|Levy(2007)) 51 4 - 0 "91186(38|Conrad(2009),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pinto(2011),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" MRIL85955 14 22868409 22959555 91147 Gain 3 0.869687 112 821 chas 0 - 8.8 Gain 0 - -Gain- 69 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - 782(1|Ahn(2009)) "91147(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 69 - 0 "91147(94|Sebat(2004),Redon(2006),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400705KK male "research_filter, clinical_filter" IJLN67055 7 38295932 38387020 91089 Gain 3 0.869678 94 979 chas 0 - 0 - 0 - --- 118 NA NA NA ChAS 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "91089(30|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 24 118 - 0 "91089(82|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400982BS female clinical_filter NQKM94057 8 28640724 28731558 90835 Loss 1 0.924243 80 1149 chas 96.41 Loss 98.17 Loss 98.21 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" 8p21.1 - INTS9 1 INTS9 1 - - - - - - 48 - 0 90835(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400917CG female "research_filter, clinical_filter" PGEB85888 7 79319288 79410073 90786 Gain 3 0.890134 40 2327 chas 0 - 55.44 Gain 0 - -Gain- 46 NA NA NA "ChAS,NXS" 7q21.11 - MIR548M 1 MIR548M 1 - - - 10953(1|Matsuzaki(2009)) 501(1|Perry(2008)) - 46 - 0 "90786(7|Itsara(2009),Redon(2006),Perry(2008),Durbin(2010))" FALSE TRUE ipn_no algo_yes NA 401582GG female research_filter QKWF92816 8 50093277 50184014 90738 Gain 3 0.901255 81 1134 chas 100 Gain 100 Gain 0 - GainGain- 80 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 8q11.21 - - 0 - 0 - - - 7126(1|Kim(2009)) - - 80 - 0 "22789(4|Pinto(2011),Teague(2010),Kim(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400295PS female "research_filter, clinical_filter" IPKK73915 X 77054955 77145622 90668 Gain 2 0.930364 82 1119 chas 97.07 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" Xq21.1 - MAGT1 1 MAGT1 1 MAGT1 - - "2426(6|Pang(2010),Conrad(2009),Park(2010),Matsuzaki(2009),Ju(2010))" "1842(9|Levy(2007),Matsuzaki(2009))" - 3 MAGT1#id_known 1 "90668(24|Ju(2010),Conrad(2009),Levy(2007),Durbin(2010),Pang(2010),Wilson(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400999HR male "research_filter, clinical_filter" WYNE83745 7 38287927 38378483 90557 Gain 3 0.871613 99 924 chas 0 - 38.23 Gain 0 - -Gain- 118 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "90557(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 33 118 - 0 "90557(61|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401844ZD male "research_filter, clinical_filter" DZVA59681 18 64485754 64576309 90556 Loss 1 0.922531 52 1775 chas 98.41 Loss 99.21 Loss 99.21 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - - "37506(2|McKernan(2009),Shaikh(2009))" "644(5|Wang(2008),Pang(2010),Bentley(2008),Mills(2006))" - 56 - 0 "90556(25|Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" TAVH54072 8 47199181 47289732 90552 Loss 1 0.884512 24 3937 chas 0 - 19.5 Loss 29.47 Loss #NAME? 14 NA NA NA "ChAS,NXS,PTK" 8q11.1 - - 0 - 0 - - - "90552(10|Itsara(2009),Conrad(2009),Ahn(2009),Matsuzaki(2009),Shaikh(2009))" 128(1|Bentley(2008)) - 14 - 0 "90552(25|Conrad(2009),Ahn(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Bentley(2008),Wilson(2010),Perry(2008b),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400948EV female research_filter CVYW15790 6 140742108 140832632 90525 Loss 1 0.925917 46 2011 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 39 NA NA NA "ChAS,IPN,NXS,PTK" 6q24.1 - - 0 - 0 - - - 2045(1|Park(2010)) 159(1|Ahn(2009)) - 39 - 0 "90525(5|Park(2010),Ahn(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" AMDW97336 18 39621274 39711755 90482 Gain 3 0.908266 64 1436 chas 80.76 Gain 81.88 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 18q12.3 - PIK3C3 1 PIK3C3 1 - - - 90482(1|Gusev(2009)) - - 44 - 0 "90482(4|Gusev(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401281BP male "research_filter, clinical_filter" QVOH35939 17 69598643 69689109 90467 Gain 3 0.90661 47 1966 chas 82.92 Gain 91.51 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 17q24.3 - - 0 - 0 - - - - - - 63 - 0 "43207(14|Kidd(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400291VJ male research_filter MYLH81171 1 104812052 104902248 90197 Loss 1 0.900176 87 1048 chas 100 Loss 95.37 Loss 100 Loss LossLossLoss 72 NA NA NA "ChAS,IPN,NXS,PTK" 1p21.1 - - 0 - 0 - - - "3291(2|McKernan(2009),Bentley(2008))" - 3 72 - 0 "29316(16|Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401972BA male "research_filter, clinical_filter" XNQF62194 6 95442343 95532493 90151 Loss 1 0.909784 60 1527 chas 87.88 Loss 93.87 Loss 93.86 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "90151(6|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 62 - 0 "90151(11|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401690HA male "research_filter, clinical_filter" GWFO72077 14 22851242 22941347 90106 Loss 1 0.848777 118 770 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "90106(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 65 - 0 "90106(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401536BD female clinical_filter IELV11932 18 39621274 39711287 90014 Gain 3 0.900275 62 1475 chas 81.18 Gain 82.3 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 18q12.3 - PIK3C3 1 PIK3C3 1 - - - 90014(1|Gusev(2009)) - - 44 - 0 "90014(4|Gusev(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400869BK female "research_filter, clinical_filter" IJPA28382 7 38292548 38382472 89925 Loss 1 0.879776 97 936 chas 0 - 47.13 Loss 97.84 Loss #NAME? 118 80.54 Loss "BS,GTC" "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "89925(26|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 29 118 - 0 "89925(70|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400103BN female "research_filter, clinical_filter" CZJD30358 X 134247275 134337115 89841 Gain 3 0.890489 40 2303 chas 38.78 Gain 0 - 0 - Gain-- 28 40.03 Gain "BS,GTC,IP6" "ChAS,IPN" Xq26.3 - "LOC100129515,CXorf48" 2 "LOC100129515,CXorf48" 2 - - 57879(2|Kidd(2008)) - 1(1|Levy(2007)) 97 28 - 0 "89841(6|Locke(2006),Kidd(2008),Redon(2006),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400063BR female research_filter NVDU55912 7 38292679 38382472 89794 Loss 1 0.916934 94 965 chas 0 - 73.93 Loss 99.29 Loss #NAME? 118 NA NA NA "ChAS,NXS,PTK" 7p14.1 - "LOC100506776,TARP" 2 "LOC100506776,TARP" 2 - - - "89794(26|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 28 118 - 0 "89794(70|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401307VR male "research_filter, clinical_filter" VBEF49630 10 46966534 47056291 89758 Gain 3 0.882733 100 906 chas 0 - 100 Gain 100 Gain #NAME? 61 NA NA NA "ChAS,NXS,PTK" 10q11.22 - "GPRIN2,SYT15" 2 "GPRIN2,SYT15" 2 - - "45973(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "89758(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 61 - 0 "89758(193|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400022WA female "research_filter, clinical_filter" TUWR15724 17 33676494 33766137 89644 Loss 1 0.907398 68 1337 chas 84.84 Loss 92.42 Loss 92.42 Loss LossLossLoss 41 84.86 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "82103(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 13 41 - 0 "89644(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401207DA male "research_filter, clinical_filter" WUVU37744 17 33676494 33766137 89644 Loss 1 0.906058 68 1337 chas 84.84 Loss 92.42 Loss 92.42 Loss LossLossLoss 41 84.86 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "82103(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 13 41 - 0 "89644(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" CYTX87896 17 33676494 33766137 89644 Loss 1 0.895639 68 1337 chas 84.84 Loss 92.42 Loss 92.42 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "82103(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 13 41 - 0 "89644(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400967PK male "research_filter, clinical_filter" IDTW13637 17 33676494 33766137 89644 Loss 1 0.908574 68 1337 chas 84.84 Loss 88.05 Loss 96.63 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "82103(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 13 41 - 0 "89644(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" CETD95374 17 33676494 33766137 89644 Loss 1 0.898824 68 1337 chas 84.84 Loss 88.05 Loss 92.42 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - "SLFN11,SLFN12,SLFN13" 3 "SLFN11,SLFN12,SLFN13" 3 - - - "82103(3|Itsara(2009),Conrad(2009),Shaikh(2009))" - 13 41 - 0 "89644(14|Itsara(2009),Conrad(2009),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401331LJ female "research_filter, clinical_filter" TGEI86896 11 55363327 55452964 89638 Loss 1 0.865586 103 878 chas 99.98 Loss 25.95 Loss 0 - LossLoss- 63 NA NA NA "ChAS,IPN,NXS" 11q11 - "OR4P4,OR4C6,OR4C11,OR4S2" 4 "OR4P4,OR4C6,OR4C11,OR4S2" 4 - - "87684(2|Kidd(2008),Korbel(2007))" "89638(71|Sebat(2004),Itsara(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" 372(1|Young(2008)) - 63 - 0 "89638(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401742KB male "research_filter, clinical_filter" GLGF34868 9 138219716 138309279 89564 Gain 3 0.904772 52 1756 chas 82.54 Gain 91.09 Gain 0 - GainGain- 66 NA NA NA "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "89564(14|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),Pang(2010),Kidd(2008),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" "1048(4|Levy(2007),McKernan(2009),Bentley(2008))" - 66 - 0 "89564(31|Conrad(2009),Wong(2007),Jakobsson(2008),Kidd(2010),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2010b),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Pinto(2011),Bentley(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401268PS male "research_filter, clinical_filter" WCSO50334 14 22848656 22938126 89471 Gain 3 0.870205 108 836 chas 0 - 93.16 Gain 0 - -Gain- 65 0 - - "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "89471(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 65 - 0 "89471(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400073HT male "research_filter, clinical_filter" WZBZ52169 16 48423724 48512981 89258 Gain 3 0.891978 68 1332 chas 75.15 Gain 99.99 Gain 0 - GainGain- 52 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 16q12.1 - - 0 - 0 - - - "11525(7|Pang(2010),Conrad(2009),McKernan(2009),Matsuzaki(2009),Ju(2010))" 441(2|Matsuzaki(2009)) - 52 - 0 "89258(104|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),McKernan(2009),Durbin(2010),Pang(2010),Wilson(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401619BT female "research_filter, clinical_filter" TBVD73320 5 46224011 46313261 89251 Loss 1 0.904837 16 5950 chas 0 - 89.64 Loss 0 - -Loss- 16 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "89251(16|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 16 - 0 "89251(51|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400712GC female research_filter KSNB36135 X 63280828 63370077 89250 Gain 3 0.898923 52 1750 chas 99.66 Gain 0 - 0 - Gain-- 34 NA NA NA "ChAS,IPN" Xq11.2 - - 0 - 0 - - - - - - 34 - 0 "89250(4|Kidd(2008),Levy(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401677MM female "research_filter, clinical_filter" QDNW53844 17 44187492 44276618 89127 Gain 3 0.899325 100 900 chas 28.2 Gain 99.97 Gain 100 Gain GainGainGain 85 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 89127(1|Kidd(2008)) "89127(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 85 - 0 "89127(239|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" DLYI64271 17 44187492 44276618 89127 Gain 3 0.899062 100 900 chas 28.44 Gain 100 Gain 100 Gain GainGainGain 85 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "22714#1%""17q21.3 recurrent microdeletion syndrome"":577740" 89127(1|Kidd(2008)) "89127(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 85 - 0 "89127(239|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401292ER female "research_filter, clinical_filter" XREB60973 14 22843437 22932471 89035 Loss 1 0.868807 99 908 chas 0 - 82.42 Loss 100 Loss #NAME? 61 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "89035(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 61 - 0 "89035(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401084TD male "research_filter, clinical_filter" LETQ64470 11 55374019 55462994 88976 Gain 3 0.89689 104 863 chas 0 - 90.89 Gain 0 - -Gain- 67 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "87932(2|Kidd(2008),Korbel(2007))" "88976(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "88976(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401812HG male "research_filter, clinical_filter" QCLE90373 11 55374019 55462994 88976 Gain 3 0.873594 104 863 chas 0 - 62.45 Gain 0 - -Gain- 67 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "87932(2|Kidd(2008),Korbel(2007))" "88976(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "88976(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401053MF female "research_filter, clinical_filter" PYHX78792 11 55374019 55462994 88976 Gain 3 0.869134 104 863 chas 0 - 93.32 Gain 0 - -Gain- 67 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "87932(2|Kidd(2008),Korbel(2007))" "88976(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "88976(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401799DP male "research_filter, clinical_filter" NSZE63198 11 55374019 55462994 88976 Gain 3 0.885665 104 863 chas 0 - 97.38 Gain 99.91 Gain #NAME? 67 0 - - "ChAS,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "87932(2|Kidd(2008),Korbel(2007))" "88976(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "88976(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400724CD male "research_filter, clinical_filter" EIZV81962 11 55374019 55462994 88976 Gain 3 0.878811 104 863 chas 0 - 75.58 Gain 0 - -Gain- 67 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "87932(2|Kidd(2008),Korbel(2007))" "88976(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 67 - 0 "88976(758|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400937OR female "research_filter, clinical_filter" PYXL51166 2 130817326 130906171 88846 Loss 1 0.87936 26 3553 chas 0 - 0 - 0 - --- 17 6.65 Loss BS ChAS 2q21.1 - "LOC285103,POTEF,CCDC74B" 3 "LOC285103,POTEF,CCDC74B" 3 - - - "88846(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 17 - 0 "88846(39|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 401146US female clinical_filter TBRP43796 5 177166127 177254952 88826 Loss 1 0.88237 16 5921 chas 0 - 0 - 0 - --- 7 36.39 Loss BS ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "88826#1%""Sotos syndrome"":2326144" - "88826(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "88826(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_yes 401894PD male - YKWT45889 5 177166127 177254952 88826 Gain 4 0.918809 16 5921 chas 0 - 0 - 0 - --- 7 5.69 Gain BS ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "88826#1%""Sotos syndrome"":2326144" - "88826(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "88826(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_yes 400094RS male - JSXF59945 5 177166127 177254952 88826 Gain 4 0.919687 16 5921 chas 0 - 0 - 0 - --- 7 5.69 Gain BS ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "88826#1%""Sotos syndrome"":2326144" - "88826(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "88826(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_yes 401863BD_1 female - PCSL59179 5 177166127 177254952 88826 Gain 4 0.918696 16 5921 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "88826#1%""Sotos syndrome"":2326144" - "88826(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "88826(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401879HJ male - IRJE88693 17 43586396 43675217 88822 Gain 3 0.893003 31 2960 chas 0 - 0 - 0 - --- 25 0 - - ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "42752#1%""17q21.3 recurrent microdeletion syndrome"":577740" "88822(2|Stefansson(2005),Kidd(2008))" "88822(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 99 24 - 0 "88822(130|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400739SS_1 female - GUZB61909 15 43888207 43976997 88791 Gain 3 0.879699 73 1233 chas 0 - 76.19 Gain 0 - -Gain- 24 100 Gain "BS,IP6" "ChAS,NXS" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "88791(17|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "88791(39|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_yes 401029SD_1 female "research_filter, clinical_filter" DLWB63913 7 79313774 79402551 88778 Gain 3 0.883139 46 1972 chas 91.6 Gain 92.33 Gain 0 - GainGain- 48 NA NA NA "ChAS,IPN,NXS" 7q21.11 - MIR548M 1 MIR548M 1 - - - 10953(1|Matsuzaki(2009)) 501(1|Perry(2008)) - 48 - 0 "88778(7|Itsara(2009),Redon(2006),Perry(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401606CG female research_filter ZRXE40373 15 43888262 43976997 88736 Loss 1 0.861252 72 1249 chas 40.06 Loss 10.77 Loss 55.51 Loss LossLossLoss 24 99.35 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "88736(17|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "88736(39|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" BYSK29073 3 4133730 4222445 88716 Loss 1 0.918382 53 1706 chas 100 Loss 100 Loss 100 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "88716(24|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Levy(2007)) - 65 - 0 "88716(38|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" BOER26307 5 177143920 177232531 88612 Gain 4 0.918046 16 5907 chas 0 - 0 - 0 - --- 9 0 - - ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "88612#1%""Sotos syndrome"":2326144" - "88612(10|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 9 - 0 "88612(34|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400571WV female - GKVG35266 3 26362434 26451025 88592 Loss 1 0.923374 48 1884 chas 81.99 Loss 90.99 Loss 91 Loss LossLossLoss 48 81.11 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "3p24.2,3p24.1" - - 0 - 0 - - - "86947(23|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Wheeler(2008),Mills(2006),Kim(2009),McCarroll(2008))" - - 48 - 0 "27488(138|Ju(2010),Ahn(2009),McKernan(2009),Conrad(2009),Campbell(2011),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Pang(2010),Park(2010),Pinto(2011),Mills(2006),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" LLRB50237 15 43888262 43976839 88578 Loss 1 0.870185 70 1283 chas 12.44 Loss 10.79 Loss 0 - LossLoss- 24 NA NA NA "ChAS,IPN,NXS" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "88578(17|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 24 - 0 "88578(39|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" YMNK31782 X 140558642 140647150 88509 Loss 1 0.875818 12 8046 chas 0 - 0 - 0 - --- 6 0 - - ChAS Xq27.2 - SPANXA2-OT1 1 SPANXA2-OT1 1 - - 88509(1|Kidd(2008)) "88509(5|Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - 98 6 - 0 "88509(12|Conrad(2009),Jakobsson(2008),Sharp(2005),Durbin(2010),Kidd(2008),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400438DB female - UEDI98118 22 24313754 24402255 88502 Loss 1 0.92212 12 8045 chas 80.54 Loss 26.87 Loss 47.04 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.23 - "GSTT2,GSTT1,DDTL,LOC391322,GSTTP1,GSTTP2,DDT" 7 "GSTT2,GSTT1,DDTL,LOC391322,GSTTP1,GSTTP2,DDT" 7 - - - "88502(62|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" 1287(2|Park(2010)) 72 37 - 0 "88502(416|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400131CM female research_filter IAET85141 5 588430 676847 88418 Gain 3 0.898604 104 858 chas 51.89 Gain 84.4 Gain 100 Gain GainGainGain 66 99.95 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,CEP72" 2 "TPPP,CEP72" 2 - "88418#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "88418(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),Shaikh(2009))" "3953(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Kim(2009),Mills(2006))" 8 65 TPPP#asd_candidate 1 "88418(145|Teague(2010),Redon(2006),Ju(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Wang(2007),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401136LB male "research_filter, clinical_filter" DCUN59806 5 588430 676847 88418 Gain 3 0.90041 104 858 chas 89.58 Gain 73.11 Gain 100 Gain GainGainGain 66 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - "TPPP,CEP72" 2 "TPPP,CEP72" 2 - "88418#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "88418(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),Shaikh(2009))" "3953(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Levy(2007),Bentley(2008),Pang(2010),Kim(2009),Mills(2006))" 8 65 TPPP#asd_candidate 1 "88418(145|Teague(2010),Redon(2006),Ju(2010),Bentley(2008),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Wang(2007),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400316SL female "research_filter, clinical_filter" SMGW17663 14 106072251 106160630 88380 Loss 1 0.902317 17 5523 chas 96.76 Loss 32.32 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - 33715(1|Kidd(2008)) "88380(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88380(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400362TV female research_filter IAQN76409 14 106072251 106160500 88250 Loss 1 0.903687 16 5883 chas 96.9 Loss 64.06 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "88250(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88250(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401820SD female research_filter YMNK31782 14 106072251 106160500 88250 Loss 1 0.916416 16 5883 chas 0 - 89.81 Loss 100 Loss #NAME? 18 92.7 Loss GTC "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "88250(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88250(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 400438DB female research_filter FXID76383 14 106072251 106160500 88250 Loss 1 0.885576 16 5883 chas 0 - 69.32 Loss 100 Loss #NAME? 18 92.7 Loss GTC "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "88250(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88250(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401922MW male research_filter VOAZ29383 14 106072251 106160500 88250 Loss 1 0.888592 16 5883 chas 0 - 0 - 100 Loss #NAME? 18 NA NA NA "ChAS,PTK" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "88250(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88250(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 400834SS female research_filter WMOD47474 14 106072251 106160500 88250 Gain 4 0.925872 16 5883 chas 0 - 100 Gain 100 Gain #NAME? 18 NA NA NA "ChAS,NXS,PTK" 14q32.33 - - 0 - 0 - - 33585(1|Kidd(2008)) "88250(44|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009))" "2189(9|Conrad(2009),Levy(2007),Matsuzaki(2009))" 98 18 - 0 "88250(200|Conrad(2009),Ahn(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Wang(2007),Itsara(2009),Levy(2007),Kidd(2008),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Cooper(2008),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes NA 401489CB male research_filter SKLJ58672 12 108398193 108486440 88248 Loss 1 0.931879 96 928 chas 96.15 Loss 97.98 Loss 97.97 Loss LossLossLoss 79 89.29 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q23.3 - - 0 - 0 - - 9516(1|Kidd(2008)) "88248(5|Itsara(2009),Kidd(2008),Conrad(2009))" - - 79 - 0 "88248(15|Teague(2010),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" NHGO29651 2 57593298 57681536 88239 Gain 3 0.900891 60 1495 chas 99.99 Gain 100 Gain 0 - GainGain- 52 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p16.1 - - 0 - 0 - - - "81283(2|Itsara(2009),Pinto(2007))" - - 52 - 0 "88239(15|Itsara(2009),Pinto(2007),Shaikh(2009),Durbin(2010),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400524NJ female "research_filter, clinical_filter" HBQS50118 16 70179330 70267547 88218 Loss 1 0.871142 18 5189 chas 0 - 0 - 0 - --- 30 38.2 Loss GTC ChAS 16q22.1 - "LOC729513,PDPR,CLEC18C" 3 "LOC729513,PDPR,CLEC18C" 3 - - - "88218(26|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 82 30 - 0 "88218(125|Ju(2010),Korbel(2007),Redon(2006),Perry(2008b),Pang(2010),Pinto(2011),Locke(2006),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Levy(2007),Schuster(2010),Durbin(2010),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 400205SP_1 male - AVJL63299 16 6763793 6851869 88077 Loss 1 0.918965 340 259 chas 96.36 Loss 98.19 Loss 98.18 Loss LossLossLoss 144 NA NA NA "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 RBFOX1 1 - - - "88077(11|Conrad(2009),Jakobsson(2008),Conrad(2005),Perry(2008),Itsara(2009),Matsuzaki(2009),Pinto(2007),Redon(2006),Simon-Sanchez(2007))" 627(1|Conrad(2009)) - 144 - 0 "88077(32|Conrad(2009),Redon(2006),Perry(2008),Itsara(2009),Conrad(2006),Durbin(2010),Bentley(2008),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" JABM59002 15 84827469 84915506 88038 Loss 1 0.879552 10 9782 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 15q25.2 - "LOC440300,LOC100505679,LOC388152" 3 "LOC440300,LOC100505679,LOC388152" 3 - - "17921(2|Kidd(2008),Tuzun(2005))" "88038(24|Park(2010),Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" - 100 9 - 0 "88038(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Tuzun(2005),Durbin(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400328LM female - BTJZ41884 15 84827469 84915506 88038 Loss 1 0.870197 10 9782 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 15q25.2 - "LOC440300,LOC100505679,LOC388152" 3 "LOC440300,LOC100505679,LOC388152" 3 - - "17921(2|Kidd(2008),Tuzun(2005))" "88038(24|Park(2010),Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" - 100 9 - 0 "88038(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Tuzun(2005),Durbin(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400068PW female - IXLI37228 X 80086220 80174252 88033 Loss 0 0.949586 42 2147 chas 91.81 Loss 0 - 0 - Loss-- 47 97.51 Loss "BS,GTC,IP6" "ChAS,IPN" Xq21.1 - - 0 - 0 - - - 88033(1|de Smith(2007)) - - 47 - 0 "88033(5|De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" QRKX79081 17 36316144 36404138 87995 Gain 4 0.928699 24 3825 chas 0 - 100 Gain 0 - -Gain- 1 0 - - "ChAS,NXS" 17q12 - "TBC1D3,LOC440434,TBC1D3F" 3 "TBC1D3,LOC440434,TBC1D3F" 3 - - - "87995(18|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "87995(107|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400631SJ male research_filter SBTA40047 5 46010532 46098523 87992 Loss 1 0.915645 24 3825 chas 0 - 95.15 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 10 - 0 "87992(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401628GC female research_filter UXJM82913 5 46010532 46098523 87992 Loss 1 0.915717 24 3825 chas 0 - 95.15 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 10 - 0 "87992(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401359HF male research_filter QEPL68818 5 46010532 46098523 87992 Loss 1 0.903058 24 3825 chas 0 - 95.15 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 10 - 0 "87992(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 402028BD male research_filter HAAE15834 5 46010532 46098523 87992 Loss 1 0.883281 24 3825 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 10 - 0 "87992(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401899MB male - UJRA83281 5 46010532 46098523 87992 Loss 1 0.900065 24 3825 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 10 - 0 "87992(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401361GG male - HGCG44121 22 18916828 19004772 87945 Gain 3 0.892317 51 1758 chas 38.86 Gain 100 Gain 100 Gain GainGainGain 57 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87945#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87945(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87945(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" VZJS13167 22 18916843 19004772 87930 Gain 3 0.908633 50 1794 chas 99.97 Gain 68.04 Gain 100 Gain GainGainGain 57 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400213DB female "research_filter, clinical_filter" KIAD94479 22 18916843 19004772 87930 Loss 1 0.951753 50 1794 chas 99.97 Loss 100 Loss 99.66 Loss LossLossLoss 57 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" BKFI83925 22 18916843 19004772 87930 Gain 3 0.900405 50 1794 chas 100 Gain 80.48 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" QIUJ19845 22 18916843 19004772 87930 Gain 3 0.89896 50 1794 chas 100 Gain 68.04 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401853WR male "research_filter, clinical_filter" SFLX52247 22 18916843 19004772 87930 Loss 1 0.931824 50 1794 chas 99.76 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" INSC49339 22 18916843 19004772 87930 Loss 1 0.938292 50 1794 chas 99.97 Loss 99.99 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" PDHC59420 22 18916843 19004772 87930 Gain 3 0.903685 50 1794 chas 99.76 Gain 100 Gain 100 Gain GainGainGain 57 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" TLUO25428 22 18916843 19004772 87930 Gain 3 0.893243 50 1794 chas 0 - 74.96 Gain 100 Gain #NAME? 57 NA NA NA "ChAS,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87930#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87930(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 57 - 0 "87930(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401836SI female "research_filter, clinical_filter" YKWT45889 4 40682692 40770619 87928 Gain 3 0.897655 64 1395 chas 63.52 Gain 100 Gain 0 - GainGain- 55 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4p14 - NSUN7 1 NSUN7 1 - - - "16727(2|Perry(2008),Mills(2006))" - - 55 - 0 "87928(15|Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400094RS male "research_filter, clinical_filter" YREU97751 22 18916843 19004731 87889 Loss 1 0.912521 48 1869 chas 76.61 Loss 54.84 Loss 100 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87889#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87889(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 55 - 0 "87889(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" EUQI28257 22 18916843 19004731 87889 Gain 3 0.906772 48 1869 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 100 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87889#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87889(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 55 - 0 "87889(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400920MK female research_filter MUIH56067 22 18916843 19004731 87889 Gain 3 0.916382 48 1869 chas 75.74 Gain 68.46 Gain 99.64 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87889#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87889(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 55 - 0 "87889(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400930MK female research_filter ISVP82924 22 18916843 19004731 87889 Gain 3 0.906908 48 1869 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87889#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87889(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 55 - 0 "87889(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401400NP male research_filter TGHP62000 22 18916843 19004731 87889 Gain 3 0.906228 48 1869 chas 99.79 Gain 75.13 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87889#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87889(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 54 55 - 0 "87889(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400882DD male research_filter PCKY38343 19 55251902 55339720 87819 Loss 1 0.908879 27 3377 chas 0 - 100 Loss 100 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 KIR3DL1 - - "87819(48|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 34 - 0 "87819(130|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 400127MD male "research_filter, clinical_filter" GDLU88739 15 84827469 84915261 87793 Loss 1 0.881254 8 12541 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 15q25.2 - "LOC440300,LOC100505679,LOC388152" 3 "LOC440300,LOC100505679,LOC388152" 3 - - "17676(2|Kidd(2008),Tuzun(2005))" "87793(24|Park(2010),Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008))" - 100 8 - 0 "87793(45|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Tuzun(2005),Durbin(2010),Pinto(2011),Perry(2008b),Park(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400268SY female - VZCC67569 10 111224980 111312763 87784 Gain 3 0.904856 55 1625 chas 80.17 Gain 89.95 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" 10q25.1 - - 0 - 0 - - - - - - 50 - 0 "87784(3|Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" APBT44417 13 64306395 64394120 87726 Gain 3 0.886621 65 1370 chas 48.67 Gain 58.19 Gain 0 - GainGain- 58 NA NA NA "ChAS,IPN,NXS" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 24619(1|Kidd(2008)) "87726(8|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 81 58 - 0 "87726(13|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400701MM female "research_filter, clinical_filter" NNNK99860 5 46010532 46098233 87702 Loss 1 0.875125 22 4176 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 5p12 - - 0 - 0 - - - "49566(2|Itsara(2009),McKernan(2009))" - - 9 - 0 "87702(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400439IM female - DZXP20142 10 27607905 27695601 87697 Loss 1 0.905043 110 804 chas 100 Loss 100 Loss 100 Loss LossLossLoss 86 NA NA NA "ChAS,IPN,NXS,PTK" 10p12.1 - PTCHD3 1 PTCHD3 1 - - - "87697(24|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),Wang(2008),Kidd(2008),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 963(1|Matsuzaki(2009)) 47 86 - 0 "87697(73|Teague(2010),Korbel(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Campbell(2011),Wang(2008),Durbin(2010),Bentley(2008),Kidd(2008),Kidd(2010b),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" VLMR80827 1 223633393 223720917 87525 Gain 3 0.908311 84 1054 chas 100 Gain 89.87 Gain 0 - GainGain- 111 84.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1q41 - CAPN8 1 CAPN8 1 - - - "11014(2|Conrad(2009),Redon(2006))" - - 110 - 0 "82640(11|Conrad(2009),Wong(2007),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401630MK female "research_filter, clinical_filter" HAAE15834 14 22849231 22936709 87479 Gain 3 0.873001 96 920 chas 0 - 40.94 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 14q11.2 - - 0 - 0 - - - "87479(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 61 - 0 "87479(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401899MB male "research_filter, clinical_filter" UXJM82913 15 87782905 87870343 87439 Loss 1 0.918724 68 1305 chas 93.63 Loss 100 Loss 100 Loss LossLossLoss 65 NA NA NA "ChAS,IPN,NXS,PTK" 15q25.3 - - 0 - 0 - - - "87439(7|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 65 - 0 "75244(14|Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" MRAO63769 X 89449156 89536405 87250 Loss 1 0.852069 28 3231 chas 0 - 0 - 0 - --- 27 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 99 27 - 0 "81890(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 400093BL female clinical_filter NKFT59098 X 89449156 89536405 87250 Loss 1 0.867398 28 3231 chas 0 - 0 - 0 - --- 27 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 99 27 - 0 "81890(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 400012CJ female clinical_filter THKF48028 X 89449156 89536405 87250 Loss 1 0.84522 28 3231 chas 0 - 0 - 0 - --- 27 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 99 27 - 0 "81890(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" TRUE TRUE ipn_no algo_no affy6_no 400601WC female clinical_filter FOMC40154 11 54701512 54788759 87248 Gain 4 0.930556 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 401096SL male research_filter LETQ64470 11 54701512 54788759 87248 Gain 3 0.899815 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 64.53 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401812HG male research_filter UKBP75340 11 54701512 54788759 87248 Gain 4 0.947824 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400059SV female research_filter NHGO29651 11 54701512 54788759 87248 Gain 4 0.916179 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 64.53 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400524NJ female research_filter XUMQ23395 11 54701512 54788759 87248 Gain 4 0.934545 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401875FG male research_filter FJSF95972 11 54701512 54788759 87248 Gain 4 0.930524 14 6711 chas 64.53 Gain 0 - 0 - Gain-- 6 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "87248(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87248(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401020DJ female research_filter SBTA40047 8 47366668 47453902 87235 Loss 1 0.892067 32 2814 chas 0 - 55.37 Loss 0 - -Loss- 29 NA NA NA "ChAS,NXS" 8q11.1 - - 0 - 0 - - - "87235(10|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" "1682(6|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008))" - 29 - 0 "87235(52|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401628GC female "research_filter, clinical_filter" UXJM82913 8 47366668 47453902 87235 Loss 1 0.905402 32 2814 chas 0 - 55.37 Loss 98.67 Loss #NAME? 29 NA NA NA "ChAS,NXS,PTK" 8q11.1 - - 0 - 0 - - - "87235(10|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" "1682(6|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008))" - 29 - 0 "87235(52|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" TJGR62389 7 56068158 56155385 87228 Gain 3 0.892996 60 1478 chas 58.76 Gain 0 - 0 - Gain-- 33 87.87 Gain "BS,GTC,IP6" "ChAS,IPN" 7p11.2 - "SNORA15,SUMF2,CCT6A,PHKG1,PSPH" 5 "SNORA15,SUMF2,CCT6A,PHKG1,PSPH" 5 PSPH - - "87228(5|Park(2010),Conrad(2009),Kim(2009))" 560(1|Park(2010)) 40 33 - 0 "87228(18|Park(2010),Conrad(2009),Kim(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" UJRI14149 3 118733450 118820644 87195 Gain 4 0.918607 94 937 chas 98.03 Gain 100 Gain 100 Gain GainGainGain 42 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q13.32 - IGSF11 1 IGSF11 1 - - - "76059(3|de Smith(2007),Itsara(2009),Jakobsson(2008))" - - 42 - 0 "87195(13|Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400227MM female "research_filter, clinical_filter" WCXF39029 11 54701632 54788759 87128 Gain 4 0.951557 12 7920 chas 64.61 Gain 0 - 0 - Gain-- 6 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "87128(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87128(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400788PV male research_filter QUIW42968 11 54701632 54788759 87128 Gain 4 0.916184 12 7920 chas 64.61 Gain 0 - 0 - Gain-- 6 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "87128(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87128(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400926LJ female research_filter XOFJ42304 11 54701632 54788759 87128 Gain 4 0.922083 12 7920 chas 64.61 Gain 0 - 0 - Gain-- 6 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "87128(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87128(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400177CG male research_filter HHAT36498 11 54701632 54788759 87128 Gain 4 0.917754 12 7920 chas 64.61 Gain 0 - 0 - Gain-- 6 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "87128(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 6 - 0 "87128(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400574MA female research_filter OAGJ33866 12 123656809 123743927 87119 Gain 3 0.897729 40 2233 chas 94.68 Gain 78.44 Gain 0 - GainGain- 26 NA NA NA "ChAS,IPN,NXS" 12q24.31 - "MPHOSPH9,C12orf65" 2 "MPHOSPH9,C12orf65" 2 C12orf65 - - - "1746(3|Pang(2010),Conrad(2009),Wheeler(2008))" - 26 - 0 "87119(7|Pinto(2011),Conrad(2009),Pang(2010))" FALSE TRUE ipn_yes algo_yes NA 401265CB male research_filter JITM64437 22 18916843 19003938 87096 Gain 4 0.924802 46 1935 chas 100 Gain 100 Gain 100 Gain GainGainGain 55 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - "PRODH,DGCR5" 2 "PRODH,DGCR5" 2 PRODH "87096#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "87096(27|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 55 55 - 0 "87096(74|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400661AD male research_filter LAYE10086 10 68333762 68420793 87032 Loss 1 0.920529 112 784 chas 97.6 Loss 98.79 Loss 98.79 Loss LossLossLoss 81 97.61 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "74760(4|Itsara(2009),Park(2010),Redon(2006),Shaikh(2009))" "725(2|Conrad(2009),Levy(2007))" - 81 - 0 "87032(29|Conrad(2009),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" WVAB12930 6 294124 381137 87014 Gain 3 0.877584 158 554 chas 0 - 0 - 0 - --- 91 0 - - ChAS 6p25.3 - DUSP22 1 DUSP22 1 - - - "87014(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 90 - 0 "87014(64|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400655WB female clinical_filter CBEA57280 2 75152632 75239625 86994 Gain 3 0.892943 84 1048 chas 84.35 Gain 95.63 Gain 0 - GainGain- 51 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p12 - POLE4 1 POLE4 1 - - - 86994(1|Pinto(2007)) - - 51 - 0 "86994(3|Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" ZSEZ81141 17 66088008 66174993 86986 Loss 1 0.91005 76 1159 chas 99.9 Loss 99.96 Loss 100 Loss LossLossLoss 41 96.36 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q24.2 - LOC100499466 1 LOC100499466 1 - - - "86986(3|Conrad(2009),Korbel(2007),Perry(2008))" - 93 41 - 0 "86986(11|Conrad(2009),Korbel(2007),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" DOUQ66820 17 66088008 66174993 86986 Loss 1 0.896766 76 1159 chas 99.9 Loss 99.96 Loss 99.96 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 17q24.2 - LOC100499466 1 LOC100499466 1 - - - "86986(3|Conrad(2009),Korbel(2007),Perry(2008))" - 93 41 - 0 "86986(11|Conrad(2009),Korbel(2007),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" NOAU21003 3 1733273 1820234 86962 Loss 1 0.906042 60 1473 chas 55.17 Loss 74.64 Loss 74.63 Loss LossLossLoss 83 66.15 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.3 - - 0 - 0 - - - "17507(12|Conrad(2009),McKernan(2009),Conrad(2005),Perry(2008),Ju(2010),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009),Shaikh(2009))" "1153(2|Shaikh(2009),Bentley(2008))" - 82 - 0 "86962(90|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Conrad(2006),Altshuler(2010),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Campbell(2011),Pinto(2011),Kim(2009),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400627CC female "research_filter, clinical_filter" KEHV72339 Y 26200907 26287819 86913 Gain 2 0.862175 52 1704 chas 65.75 Gain 0 - 0 - Gain-- 15 0 - - "ChAS,IPN" Yq11.23 - - 0 - 0 - "86913#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "86913(2|McCarroll(2008),Perry(2008))" - 99 15 - 0 "77564(2|McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" WDRZ91881 Y 26200907 26287819 86913 Loss 0 0.828207 52 1704 chas 25.57 Loss 0 - 0 - Loss-- 15 NA NA NA "ChAS,IPN" Yq11.23 - - 0 - 0 - "86913#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "86913(2|McCarroll(2008),Perry(2008))" - 99 15 - 0 "77564(2|McCarroll(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401426WD male "research_filter, clinical_filter" FNEG58263 15 102224341 102311246 86906 Gain 3 0.881232 266 327 chas 64.83 Gain 99.92 Gain 99.92 Gain GainGainGain 56 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - TARSL2 1 TARSL2 1 - "86906#1%""15q26 overgrowth syndrome"":3163423" - "86906(16|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),Zogopoulos(2007))" "788(3|Wang(2008),Levy(2007),Mills(2006))" 42 55 - 0 "86906(28|Teague(2010),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Iafrate(2004),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Tuzun(2005),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400836LK male "research_filter, clinical_filter" IREV30826 7 118099658 118186543 86886 Gain 3 0.884197 48 1848 chas 76.36 Gain 88.95 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 7q31.31 - - 0 - 0 - - - "72481(10|Wang(2007),Matsuzaki(2009),Conrad(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Wheeler(2008),Shaikh(2009))" - - 44 - 0 "86886(42|Conrad(2009),Wang(2007),Durbin(2010),Kidd(2008),Altshuler(2010),Campbell(2011),Pinto(2011),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401413RG male research_filter DSDE67128 6 294274 381137 86864 Gain 3 0.904182 156 560 chas 0 - 85.59 Gain 94.63 Gain #NAME? 91 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86864(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 90 - 0 "86864(64|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401125LM female "research_filter, clinical_filter" UFJQ31039 X 62418739 62505594 86856 Gain 2 0.933253 20 4571 chas 40.12 Gain 0 - 0 - Gain-- 27 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "77481(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 60 27 - 0 "86856(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401551MB male research_filter WUVU37744 X 62418739 62505594 86856 Gain 2 0.909778 20 4571 chas 40.12 Gain 0 - 0 - Gain-- 27 82.96 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "77481(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 60 27 - 0 "86856(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401763SG male research_filter VPFM57168 X 62418739 62505594 86856 Gain 2 0.889317 20 4571 chas 40.12 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "77481(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 60 27 - 0 "86856(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401696CG male research_filter ZJPO23473 X 62418739 62505594 86856 Gain 2 0.909456 20 4571 chas 40.12 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "77481(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 60 27 - 0 "86856(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401173AI male research_filter UCFR59681 X 62418740 62505594 86855 Gain 2 0.895641 19 4825 chas 40.12 Gain 0 - 0 - Gain-- 27 82.96 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "77481(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 60 27 - 0 "86855(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400319HT male research_filter MGJJ89085 16 2663367 2750192 86826 Gain 3 0.887067 42 2117 chas 17.47 Gain 0 - 0 - Gain-- 25 0 - - "ChAS,IPN" 16p13.3 - "KCTD5,FLJ42627,ERVK13-1,LOC652276" 4 "KCTD5,FLJ42627,ERVK13-1,LOC652276" 4 - - - "86826(19|Wang(2007),Ahn(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 94 25 - 0 "86826(61|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Wang(2007),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400615RI female research_filter DEYQ16754 X 6743965 6830730 86766 Loss 1 0.9196 137 637 chas 97.44 Loss 0 - 0 - Loss-- 65 NA NA NA "ChAS,IPN" Xp22.31 - - 0 - 0 - "86766#1%""Steroid sulphatase deficiency (STS)"":1725741" - "86766(7|Wang(2007),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 65 - 0 "86766(8|Wang(2007),Pinto(2007),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401825TH female "research_filter, clinical_filter" ZKED26020 10 14978930 15065646 86717 Gain 3 0.894226 92 952 chas 41.25 Gain 48.19 Gain 0 - GainGain- 44 NA NA NA "ChAS,IPN,NXS" 10p13 - "MEIG1,DCLRE1C" 2 "MEIG1,DCLRE1C" 2 DCLRE1C - - "86717(9|Korbel(2007),Jakobsson(2008),Itsara(2009),Park(2010),Shaikh(2009),Mills(2006))" - 64 44 - 0 "86717(27|Wong(2007),Jakobsson(2008),Pinto(2011),Itsara(2009),Durbin(2010),Park(2010),Korbel(2007),Locke(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" YSDD20509 9 31301853 31388568 86716 Loss 1 0.921286 49 1806 chas 99.91 Loss 99.95 Loss 99.95 Loss LossLossLoss 40 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - - - - 40 - 0 6116(3|Pinto(2011)) TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" AOYC46859 16 34567199 34653903 86705 Gain 3 0.891882 44 2016 chas 87.9 Gain 89.04 Gain 0 - GainGain- 55 NA NA NA "ChAS,IPN,NXS" "16p11.1,16p11.2" - LOC283914 1 LOC283914 1 - - 86705(1|Kidd(2008)) "86705(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - - 54 - 0 "86705(66|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2010b),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400307HW male research_filter JAVP94180 16 34567199 34653903 86705 Gain 3 0.890424 44 2016 chas 90.19 Gain 53.32 Gain 95.09 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" "16p11.1,16p11.2" - LOC283914 1 LOC283914 1 - - 86705(1|Kidd(2008)) "86705(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - - 54 - 0 "86705(66|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2010b),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401932GN female research_filter PQCI84759 18 28965076 29051649 86574 Gain 3 0.906265 131 665 chas 88.97 Gain 94.09 Gain 94.09 Gain GainGainGain 76 88.99 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q12.1 - "DSG3,DSG4" 2 "DSG3,DSG4" 2 DSG4 - - "81503(4|McCarroll(2005),Conrad(2009),Pinto(2007),Zogopoulos(2007))" "590(3|Pang(2010),Levy(2007),Conrad(2005))" - 76 - 0 "84240(14|Conrad(2009),Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" CHSN35204 13 106223313 106309859 86547 Loss 1 0.923743 60 1466 chas 90.37 Loss 95.05 Loss 95.05 Loss LossLossLoss 58 90.36 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q33.2 - - 0 - 0 - - - 74349(1|Itsara(2009)) "506(6|Conrad(2009),Ju(2010),Wang(2008),Levy(2007),Bentley(2008),Pang(2010))" - 58 - 0 "86547(17|Conrad(2009),Jakobsson(2008),Ju(2010),Itsara(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" WZBZ52169 11 55374175 55460670 86496 Gain 3 0.875737 99 882 chas 0 - 0 - 0 - --- 63 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "85452(2|Kidd(2008),Korbel(2007))" "86496(74|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "86496(757|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 401619BT female clinical_filter TAVH54072 5 46010532 46097006 86475 Loss 1 0.904416 18 5086 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 5p12 - - 0 - 0 - - - "48339(2|Itsara(2009),McKernan(2009))" - - 6 - 0 "86475(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400948EV female - FPLE23103 5 46010532 46097006 86475 Loss 1 0.884062 18 5086 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 5p12 - - 0 - 0 - - - "48339(2|Itsara(2009),McKernan(2009))" - - 6 - 0 "86475(17|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400337HG male - OZXZ40778 16 74365572 74452023 86452 Loss 1 0.88375 28 3201 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "86452(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 97 12 - 0 "86452(93|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 400123WN male clinical_filter OVRI44012 10 47062985 47149411 86427 Loss 1 0.864479 112 778 chas 0 - 0 - 0 - --- 85 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 288(1|Tuzun(2005)) "86427(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 85 - 0 "86427(215|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 400083TG male clinical_filter EZDG77492 6 294713 381137 86425 Loss 1 0.916831 144 604 chas 76.21 Loss 99.86 Loss 100 Loss LossLossLoss 87 100 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86425(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 86 - 0 "86425(64|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400308SP male "research_filter, clinical_filter" TGWW40273 15 102224866 102311246 86381 Gain 3 0.883641 264 328 chas 50.78 Gain 99.92 Gain 99.92 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - TARSL2 1 TARSL2 1 - "86381#1%""15q26 overgrowth syndrome"":3163423" - "86381(16|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Kidd(2008),Pinto(2007),Tuzun(2005),Zogopoulos(2007))" "788(3|Wang(2008),Levy(2007),Mills(2006))" 43 54 - 0 "86381(28|Teague(2010),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Iafrate(2004),Durbin(2010),Pang(2010),Kidd(2008),Conrad(2009),Tuzun(2005),Locke(2006),Redon(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400140WM female "research_filter, clinical_filter" AOYC46859 6 294825 381137 86313 Gain 3 0.915516 142 612 chas 0 - 100 Gain 95.67 Gain #NAME? 86 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86313(23|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 85 - 0 "86313(64|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400307HW male "research_filter, clinical_filter" GRYY36123 10 47063105 47149411 86307 Loss 1 0.868314 111 784 chas 100 Loss 32.3 Loss 100 Loss LossLossLoss 85 0 - - "ChAS,IPN,NXS,PTK" 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 168(1|Tuzun(2005)) "86307(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 85 - 0 "86307(215|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 40031BA female "research_filter, clinical_filter" PTGD86385 15 43927952 44014242 86291 Loss 1 0.883158 50 1761 chas 12.16 Loss 10.52 Loss 87.83 Loss LossLossLoss 23 NA NA NA "ChAS,IPN,NXS,PTK" 15q15.3 - "CKMT1A,CATSPER2" 2 "CKMT1A,CATSPER2" 2 - - - "86291(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 23 - 0 "86291(39|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" GNXG93257 11 134852239 134938470 86232 Loss 1 0.911562 82 1064 chas 94.25 Loss 100 Loss 100 Loss LossLossLoss 64 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q25 - - 0 - 0 - - - "3536(2|Conrad(2009),Ju(2010))" 1(1|Levy(2007)) 21 64 - 0 "18282(21|Conrad(2009),Ju(2010),Durbin(2010),Wilson(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" NYDB63609 6 294911 381137 86227 Gain 3 0.888989 140 620 chas 0.02 Loss 0 - 0 - Loss-- 85 88.96 Gain "GTC,IP6" "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400138LA female "research_filter, clinical_filter" UYAI76550 6 294911 381137 86227 Gain 3 0.880665 140 620 chas 0.02 Loss 66.89 Gain 0 - LossGain- 85 0 - - "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400792RE female "research_filter, clinical_filter" PTKC28903 6 294911 381137 86227 Gain 3 0.888293 140 620 chas 0.02 Loss 44.92 Gain 100 "Gain,Loss" "LossGainGain,Loss" 85 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400442FE female "research_filter, clinical_filter" VBTG63612 6 294911 381137 86227 Gain 3 0.87575 140 620 chas 0.02 Loss 15.08 Gain 94.58 "Gain,Loss" "LossGainGain,Loss" 85 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401550SP female "research_filter, clinical_filter" XZCA75295 6 294911 381137 86227 Gain 3 0.890752 140 620 chas 0.02 Loss 100 "Loss,Gain" 100 "Gain,Loss" "LossLoss,GainGain,Loss" 85 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400033KC female "research_filter, clinical_filter" PAFA79672 6 294911 381137 86227 Gain 3 0.889261 140 620 chas 6.06 "Gain,Loss" 100 "Loss,Gain" 100 "Gain,Loss" "Gain,LossLoss,GainGain,Loss" 85 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402033WD male "research_filter, clinical_filter" LAJJ28425 6 294911 381137 86227 Gain 4 0.922579 140 620 chas 0 - 91.48 Gain 91.52 Gain #NAME? 85 91.44 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400728PB female "research_filter, clinical_filter" PYXL51166 6 294911 381137 86227 Gain 4 0.943853 140 620 chas 0 - 95.77 Gain 95.77 Gain #NAME? 85 88.96 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401146US female "research_filter, clinical_filter" FNMA81925 6 294911 381137 86227 Gain 3 0.891896 140 620 chas 0 - 70.69 Gain 95.77 Gain #NAME? 85 0 - - "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400171BJ male "research_filter, clinical_filter" BHQW11777 6 294911 381137 86227 Gain 3 0.885529 140 620 chas 0 - 100 Gain 100 Gain #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401027KW male "research_filter, clinical_filter" RJEG79563 6 294911 381137 86227 Gain 3 0.889649 140 620 chas 0 - 54.51 Gain 0 - -Gain- 85 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401543DC male "research_filter, clinical_filter" ACWT82545 6 294911 381137 86227 Gain 3 0.920872 140 620 chas 0 - 91.52 Gain 91.52 Gain #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401477ST male "research_filter, clinical_filter" XSKZ13040 6 294911 381137 86227 Gain 3 0.891806 140 620 chas 0 - 40.48 Gain 0 - -Gain- 85 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401824MM female "research_filter, clinical_filter" RGHO54100 6 294911 381137 86227 Gain 4 0.928545 140 620 chas 0 - 95.77 Gain 95.77 Gain #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401882CR male "research_filter, clinical_filter" TNZB91328 6 294911 381137 86227 Gain 3 0.914423 140 620 chas 0 - 95.77 Gain 95.77 Gain #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400911GA female "research_filter, clinical_filter" JFDL89779 6 294911 381137 86227 Gain 3 0.894496 140 620 chas 0 - 95.77 Gain 0 - -Gain- 85 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401526WB male "research_filter, clinical_filter" UXJM82913 6 294911 381137 86227 Gain 3 0.914701 140 620 chas 0 - 100 "Loss,Gain" 100 "Gain,Loss" #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" DOLM19463 6 294911 381137 86227 Gain 3 0.887312 140 620 chas 0 - 0 - 0 - --- 85 0 - - ChAS 6p25.3 - DUSP22 1 DUSP22 1 - - - "86227(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86227(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 401607LL male clinical_filter KRGM31190 6 294911 381118 86208 Gain 3 0.89556 138 629 chas 0.02 Loss 73.55 Gain 0 - LossGain- 84 34.31 Gain GTC "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86208(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86208(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" WKAY66815 1 147933973 148020154 86182 Loss 1 0.871738 20 4535 chas 0 - 0 - 0 - --- 0 0 - - ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "86182(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "86182(102|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400681MC female - PYJA98100 1 147933973 148020154 86182 Loss 1 0.874028 20 4535 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "86182(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "86182(102|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401981GF female - MKJI51363 6 10495236 10581415 86180 Loss 1 0.922872 83 1050 chas 86.94 Loss 89.84 Loss 89.84 Loss LossLossLoss 79 NA NA NA "ChAS,IPN,NXS,PTK" 6p24.3 - GCNT2 1 GCNT2 1 GCNT2 - - "61637(9|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),McCarroll(2005))" - - 79 - 0 "86180(17|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Conrad(2006),De(Smith_2007),Kidd(2008),Pinto(2007),Jakobsson(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" NQKM94057 11 89550027 89636184 86158 Loss 1 0.870236 20 4534 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 11q14.3 - "TRIM64B,LOC399940,TRIM53P" 3 "TRIM64B,LOC399940,TRIM53P" 3 - - 9579(1|Kidd(2008)) "86158(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010),Kim(2009))" - 100 5 - 0 "86158(37|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Locke(2006),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400917CG female - WKAY66815 19 53930304 54016460 86157 Gain 3 0.902932 120 724 chas 98.55 Gain 89.83 Gain 99.99 Gain GainGainGain 78 77.22 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "86157(7|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 76 78 - 0 "86157(34|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400681MC female "research_filter, clinical_filter" LMJA76842 19 53930304 54016460 86157 Gain 3 0.892254 120 724 chas 83.04 Gain 99.26 Gain 100 Gain GainGainGain 78 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "86157(7|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 76 78 - 0 "86157(34|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" GUYS21436 7 38292663 38378811 86149 Loss 1 0.892764 94 926 chas 0 - 68.96 Loss 0 - -Loss- 117 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "86149(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 30 117 - 0 "86149(61|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400582WS female "research_filter, clinical_filter" QVOH35939 2 49655387 49741480 86094 Loss 1 0.933768 52 1688 chas 94.45 Loss 97.21 Loss 97.22 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - 6801(1|Conrad(2009)) "993(2|Levy(2007),McKernan(2009))" - 47 - 0 "10174(8|Pinto(2011),Conrad(2009),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" NRTH35283 6 294911 380993 86083 Gain 3 0.881001 136 637 chas 0 - 73.66 Gain 0 - -Gain- 84 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "86083(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "86083(63|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401052BM female "research_filter, clinical_filter" GWDY85049 10 51817678 51903756 86079 Loss 1 0.886097 24 3742 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 10q11.23 - "FLJ31813,FAM21B,FAM21A" 3 "FLJ31813,FAM21B,FAM21A" 3 - - - "86079(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 11 - 0 "86079(21|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401093VL female - FXID76383 9 15908735 15994736 86002 Loss 1 0.93149 68 1283 chas 76.56 Loss 79.91 Loss 79.9 Loss LossLossLoss 52 83.24 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p22.3 - C9orf93 1 C9orf93 1 - - - - 763(1|Park(2010)) - 52 - 0 "26550(7|Park(2010),Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" XMEG92101 1 196827842 196913784 85943 Gain 3 0.901987 65 1342 chas 44.16 Gain 97.24 Gain 100 Gain GainGainGain 62 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.3 - "CFHR2,CFHR4" 2 "CFHR2,CFHR4" 2 - - - "85943(43|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 44 63 - 0 "85943(140|Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),McCarroll(2008),Conrad(2009),Jakobsson(2008),Alkan(2009),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" MLUO94199 19 55247894 55333814 85921 Loss 1 0.892141 28 3182 chas 0 - 83.19 Loss 100 Loss #NAME? 39 76.35 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 "KIR2DL3,KIR3DL1,KIR2DL1,KIR3DL3,KIR2DL4" 5 KIR3DL1 - - "85921(44|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 39 - 0 "85921(122|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" TJGR62389 6 95473773 95559670 85898 Loss 1 0.923824 72 1209 chas 100 Loss 98.69 Loss 100 Loss LossLossLoss 69 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "85898(6|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 69 - 0 "85898(12|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" TASV63603 14 22844970 22930808 85839 Loss 1 0.851126 77 1129 chas 0 - 0 - 0 - --- 57 100 Loss "BS,IP6" ChAS 14q11.2 - - 0 - 0 - - - "85839(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 57 - 0 "85839(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_yes 400255CD male clinical_filter JKGU55742 12 74198757 74284505 85749 Gain 3 0.909085 52 1681 chas 99.98 Gain 100 Gain 0 - GainGain- 47 NA NA NA "ChAS,IPN,NXS" 12q21.1 - - 0 - 0 - - - - "668(2|Conrad(2009),Conrad(2005))" - 47 - 0 "46215(24|Conrad(2009),Conrad(2006),Shaikh(2009),Durbin(2010),Banerjee(2011))" TRUE TRUE ipn_yes algo_yes NA 400880TM male "research_filter, clinical_filter" NJBJ54022 12 87358510 87444237 85728 Loss 1 0.923776 60 1453 chas 90.26 Loss 100 Loss 100 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12q21.32 - - 0 - 0 - - - "36682(3|McCarroll(2008),Matsuzaki(2009),Shaikh(2009))" - - 49 - 0 "85728(15|Kidd(2008),McCarroll(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401066MM female "research_filter, clinical_filter" IDTW13637 11 89636185 89721868 85684 Loss 1 0.884082 16 5712 chas 84.18 Loss 0 - 0 - Loss-- 5 NA NA NA "ChAS,IPN" 11q14.3 - "TRIM64,LOC399939,TRIM49L1,LOC399940" 4 "TRIM64,LOC399939,TRIM49L1,LOC399940" 4 - - 7959(1|Kidd(2008)) "85684(15|Kim(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009))" "963(3|Levy(2007),Matsuzaki(2009))" 98 5 - 0 "85684(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Pinto(2011),Durbin(2010),Kidd(2008),Wilson(2010),Locke(2006),Kim(2009))" FALSE TRUE ipn_yes algo_yes NA 401687LR male research_filter CETD95374 10 47062985 47148630 85646 Loss 1 0.854072 109 793 chas 0 - 0 - 0 - --- 85 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 288(1|Tuzun(2005)) "85646(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 85 - 0 "85646(213|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401331LJ female clinical_filter RQNQ20012 X 120009892 120095498 85607 Loss 1 0.887113 36 2445 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "85607(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 42 0 - 0 "85607(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 401326LI female clinical_filter GKVG35266 X 127305352 127390941 85590 Loss 1 0.913956 36 2445 chas 99.86 Loss 0 - 0 - Loss-- 22 81.35 Loss "BS,GTC,IP6" "ChAS,IPN" Xq25 - - 0 - 0 - - - - - - 22 - 0 "85590(7|Kidd(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" FPHR45460 3 162037770 162123353 85584 Loss 1 0.917772 46 1901 chas 99.99 Loss 99.96 Loss 100 Loss LossLossLoss 49 99.91 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "28924(2|Itsara(2009),Shaikh(2009))" - - 49 - 0 "85584(6|Itsara(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" WMBQ46007 1 144865073 144950574 85502 Gain 3 0.880135 144 597 chas 59.02 Gain 85.76 Gain 0 - GainGain- 79 NA NA NA "ChAS,IPN,NXS" 1q21.1 - PDE4DIP 1 PDE4DIP 1 - - - "85502(22|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Park(2010),Wheeler(2008),Ju(2010))" "1099(2|Ahn(2009),Bentley(2008))" 63 79 - 0 "85502(88|Kidd(2010b),Conrad(2009),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Teague(2010),Sebat(2004),McKernan(2009),Park(2010),Locke(2006),Bentley(2008),Pang(2010),Kidd(2008),Wong(2007),Durbin(2010),Tuzun(2005),Perry(2008b),Pinto(2011),Sharp(2005),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" OPOQ31165 X 120005087 120090575 85489 Loss 1 0.891521 35 2514 chas 0 - 0 - 0 - --- 1 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10,CT47B1" 13 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10,CT47B1" 13 - - - "85200(8|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 42 1 - 0 "85489(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400795CL female clinical_filter ZMDC73313 10 58200261 58285690 85430 Gain 3 0.896294 60 1447 chas 85.72 Gain 89.01 Gain 0 - GainGain- 50 83.15 - BS "ChAS,IPN,NXS" 10q21.1 - - 0 - 0 - - - "25671(2|Park(2010),Conrad(2009))" - 14 50 - 0 "85430(5|Park(2010),Conrad(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401165SB female "research_filter, clinical_filter" NFPW24786 7 121844217 121929598 85382 Gain 3 0.902928 55 1581 chas 88.13 Gain 95.84 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 7q31.32 - - 0 - 0 - - - - 213(1|Wheeler(2008)) - 44 - 0 1253(4|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" RXUT32164 5 98759019 98844337 85319 Loss 1 0.886302 48 1815 chas 43.29 Loss 59.52 Loss 95.86 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - - 0 - 0 - - - "56966(13|Conrad(2009),Matsuzaki(2009),McKernan(2009),Altshuler(2010),Wheeler(2008),Shaikh(2009))" "1511(4|Levy(2007),Matsuzaki(2009),Perry(2008))" 61 48 - 0 "85319(33|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Altshuler(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401813DN female "research_filter, clinical_filter" NGFJ29672 X 82648129 82733421 85293 Gain 3 0.886624 60 1445 chas 63.27 Gain 0 - 0 - Gain-- 32 NA NA NA "ChAS,IPN" Xq21.1 - - 0 - 0 - - - - - - 31 - 0 85293(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400269DA female "research_filter, clinical_filter" QRNV11451 15 87946643 88031864 85222 Loss 1 0.905141 68 1271 chas 87.98 Loss 94.87 Loss 94.87 Loss LossLossLoss 60 NA NA NA "ChAS,IPN,NXS,PTK" 15q25.3 - - 0 - 0 - - - 1725(1|Ahn(2009)) - - 60 - 0 "20540(9|Ahn(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" OBAS32636 17 43570137 43655331 85195 Loss 1 0.895322 24 3704 chas 0 - 0 - 0 - --- 17 73.7 Loss "BS,GTC" ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85195(2|Stefansson(2005),Kidd(2008))" "85195(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 17 - 0 "85195(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400249BC female - INSC49339 17 43570137 43655331 85195 Loss 1 0.915531 24 3704 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85195(2|Stefansson(2005),Kidd(2008))" "85195(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 17 - 0 "85195(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401334DH female - CVUT48167 17 43570228 43655331 85104 Loss 1 0.908235 22 4052 chas 73.53 Loss 91.28 Loss 92.75 Loss LossLossLoss 16 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401898DS male research_filter WUMM65746 17 43570228 43655331 85104 Loss 1 0.905547 22 4052 chas 0 - 95.4 Loss 80.02 Loss #NAME? 16 73.77 Loss "BS,GTC" "ChAS,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400077EB female research_filter SSWV37655 17 43570228 43655331 85104 Loss 1 0.908717 22 4052 chas 0 - 95.26 Loss 80.02 Loss #NAME? 16 NA NA NA "ChAS,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401706BJ female research_filter RBBO63662 17 43570228 43655331 85104 Loss 1 0.901192 22 4052 chas 0 - 0 - 0 - --- 16 73.73 Loss BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 401105WS male - PGEB85888 17 43570228 43655331 85104 Loss 1 0.888456 22 4052 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401582GG female - GWDY85049 17 43570228 43655331 85104 Loss 1 0.879702 22 4052 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "85104(2|Stefansson(2005),Kidd(2008))" "85104(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 16 - 0 "85104(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401093VL female - CVUT48167 2 13202931 13287980 85050 Gain 3 0.914035 48 1809 chas 83.27 Gain 100 Gain 0 - GainGain- 46 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "85050(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 46 - 0 "85050(18|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401898DS male research_filter IDVO19613 14 22855145 22940138 84994 Loss 1 0.849832 100 858 chas 0 - 0 - 0 - --- 59 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "84994(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 59 - 0 "84994(87|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401434VN female clinical_filter RIAA15120 4 54157128 54242098 84971 Loss 1 0.906208 89 965 chas 100 Loss 97.12 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 4q12 - SCFD2 1 SCFD2 1 - - - - 151(1|Bentley(2008)) - 43 - 0 "6877(3|Teague(2010),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" REUG17486 19 53930304 54015202 84899 Gain 3 0.904094 118 725 chas 100 Gain 100 Gain 100 Gain GainGainGain 78 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "84899(7|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 76 78 - 0 "84899(34|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" IWRE15730 20 3648600 3733487 84888 Gain 3 0.901073 60 1438 chas 95.68 Gain 97.85 Gain 0 - GainGain- 39 NA NA NA "ChAS,IPN,NXS" 20p13 - "HSPA12B,ADAM33,SIGLEC1" 3 "HSPA12B,ADAM33,SIGLEC1" 3 - - - 14459(1|Park(2010)) 183(1|Mills(2006)) - 39 - 0 "84888(13|Wong(2007),Jakobsson(2008),Durbin(2010),Park(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" AVGX21589 20 29421118 29506001 84884 Loss 1 0.90165 31 2829 chas 0 - 0 - 96.44 Loss #NAME? 25 99.87 Loss "BS,IP6" "ChAS,PTK" 20q11.21 - - 0 - 0 - - - "84884(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 25 - 0 "84884(21|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" TRUE TRUE ipn_no algo_yes affy6_yes 400379BB_1 female "research_filter, clinical_filter" VWYL75938 1 108769289 108854166 84878 Loss 1 0.895686 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401006ES female - BLGS11062 1 108769289 108854166 84878 Loss 1 0.892331 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401714BM female - TPDE39419 1 108769289 108854166 84878 Loss 1 0.910679 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401369GR male - VPFM57168 1 108769289 108854166 84878 Loss 1 0.880959 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401696CG male - DZXX36994 1 108769289 108854166 84878 Loss 1 0.877187 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401005BL female - XNFN85306 1 108769289 108854166 84878 Loss 1 0.895794 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401797LS male - ZDRZ89201 1 108769289 108854166 84878 Loss 1 0.890363 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401855RE male - UHFE12130 1 108769289 108854166 84878 Loss 1 0.880947 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401198TI female - DHFF12670 1 108769289 108854166 84878 Loss 1 0.893839 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401252AE male - GUYS21436 1 108769289 108854166 84878 Loss 1 0.903505 9 10609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 36330(1|Kidd(2008)) "84878(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 11 - 0 "84878(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400582WS female - YWSA20061 19 53930304 54015048 84745 Gain 3 0.904181 116 736 chas 100 Gain 100 Gain 100 Gain GainGainGain 77 90.54 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "84745(7|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 76 76 - 0 "84745(34|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" YKLI59783 6 140980511 141065253 84743 Gain 3 0.897978 56 1540 chas 88.41 Gain 98.47 Gain 0 - GainGain- 44 97.07 Gain "BS,IP6" "ChAS,IPN,NXS" 6q24.1 - MIR4465 1 MIR4465 1 - - - "76845(3|de Smith(2007),McKernan(2009))" "619(5|Conrad(2009),Levy(2007),Matsuzaki(2009),Ju(2010))" - 44 - 0 "84743(41|Teague(2010),Wong(2007),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Wilson(2010),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" VUUO47049 7 135901545 135986141 84597 Gain 3 0.901089 98 872 chas 97.11 Gain 98.56 Gain 100 Gain GainGainGain 82 NA NA NA "ChAS,IPN,NXS,PTK" 7q33 - - 0 - 0 - - - - - 5 82 - 0 "8058(2|Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400533BB female "research_filter, clinical_filter" WHOU87472 6 29837158 29921739 84582 Gain 3 0.885213 48 1799 chas 0 - 14.48 Gain 0 - -Gain- 71 NA NA NA "ChAS,NXS" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "84582(66|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 46 71 - 0 "84582(388|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401380OL male research_filter BMGG13461 6 29837174 29921739 84566 Gain 3 0.891016 47 1838 chas 0 - 0 - 0 - --- 71 0 - - ChAS 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "84566(66|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 46 71 - 0 "84566(388|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no affy6_no 400002HK female - ZSEZ81141 7 38293950 38378483 84534 Loss 1 0.887379 90 949 chas 0 - 68.91 Loss 95.66 Loss #NAME? 115 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "84534(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 29 115 - 0 "84534(61|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" DQHB62647 12 37987892 38072423 84532 Loss 1 0.909718 10 9392 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 12q11 - - 0 - 0 - - - "84532(20|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Ju(2010),Conrad(2009),McKernan(2009),Altshuler(2010),Pinto(2007),Cooper(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 2 18 - 0 "84532(66|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Teague(2010),Wang(2008),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2007),Cooper(2008),Perry(2008b),Redon(2006),McKernan(2009),Ju(2010),Korbel(2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401732HW male - YTOE66394 1 77297192 77381720 84529 Gain 3 0.898612 80 1069 chas 81.82 Gain 91.34 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 1p31.1 - ST6GALNAC5 1 ST6GALNAC5 1 - - - "10924(3|Kim(2009),Redon(2006),Mills(2006))" "2(2|Levy(2007),Mills(2006))" - 58 - 0 "42279(6|Kim(2009),Kidd(2008),Redon(2006),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" UYPJ72832 X 6746228 6830754 84527 Loss 1 0.919607 136 626 chas 100 Loss 0 - 0 - Loss-- 65 97.36 Loss "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - "84527#1%""Steroid sulphatase deficiency (STS)"":1725741" - "84527(7|Wang(2007),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 65 - 0 "84527(8|Wang(2007),Pinto(2007),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401240ML female "research_filter, clinical_filter" HXSU46589 1 108769289 108853796 84508 Loss 1 0.89946 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401299ST female - UZKE50615 1 108769289 108853796 84508 Loss 1 0.894058 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400789KV male - ZIOC12306 1 108769289 108853796 84508 Loss 1 0.883891 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400852WJ male - EXZC47846 1 108769289 108853796 84508 Loss 1 0.898776 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400468OB female - OWBB95825 1 108769289 108853796 84508 Loss 1 0.900858 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401275SJ male - PYXL51166 1 108769289 108853796 84508 Loss 1 0.898844 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401146US female - MTRE48443 1 108769289 108853796 84508 Loss 1 0.88663 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400378HL female - XMVT70735 1 108769289 108853796 84508 Loss 1 0.890124 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401873BK male - KECG80750 1 108769289 108853796 84508 Loss 1 0.878776 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400893ZE male - AIRH51991 1 108769289 108853796 84508 Loss 1 0.916173 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400236DB_1 male - WKJP80388 1 108769289 108853796 84508 Loss 1 0.904682 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400320RN male - JFSR33951 1 108769289 108853796 84508 Loss 1 0.886587 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400444MM female - GWRR97762 1 108769289 108853796 84508 Loss 1 0.895655 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400130HA female - LFNU24334 1 108769289 108853796 84508 Loss 1 0.88771 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400471YS male - OSRU53198 1 108769289 108853796 84508 Loss 1 0.89336 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400854SG male - RYUR49963 1 108769289 108853796 84508 Loss 1 0.88439 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400177SJ male - EUQI28257 1 108769289 108853796 84508 Loss 1 0.894012 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400920MK female - YZQJ34471 1 108769289 108853796 84508 Loss 1 0.881624 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400482MD male - GFOF72186 1 108769289 108853796 84508 Loss 1 0.884611 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401942MP male - UYMD11362 1 108769289 108853796 84508 Loss 1 0.86705 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400030WD female - YCEN33630 1 108769289 108853796 84508 Loss 1 0.901143 8 12072 chas 0 - 0 - 0 - --- 9 0 - - ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400294HD male - JTJC66263 1 108769289 108853796 84508 Loss 1 0.875561 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400122PL male - OGJP80646 1 108769289 108853796 84508 Loss 1 0.890165 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400704LC female - ZRRL85494 1 108769289 108853796 84508 Loss 1 0.889908 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400043HC female - ROAF64821 1 108769289 108853796 84508 Loss 1 0.899571 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401870FB male - ROCO41006 1 108769289 108853796 84508 Loss 1 0.891038 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400336BG male - TDHB82208 1 108769289 108853796 84508 Loss 1 0.938433 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400923OA female - YDKF16445 1 108769289 108853796 84508 Loss 1 0.913071 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401442WR male - LVBF79370 1 108769289 108853796 84508 Loss 1 0.907701 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401287CF male - EIKI77114 1 108769289 108853796 84508 Loss 1 0.892186 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401221LD female - QSVT75164 1 108769289 108853796 84508 Loss 1 0.901244 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401791FG male - NSQR79941 1 108769289 108853796 84508 Loss 1 0.887462 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401077VC female - TCTA60809 1 108769289 108853796 84508 Loss 1 0.883066 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401965TG female - YQRA83123 1 108769289 108853796 84508 Loss 1 0.91008 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400416KA male - WMFM14051 1 108769289 108853796 84508 Loss 1 0.898879 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400451kh female - KWBM98824 1 108769289 108853796 84508 Loss 1 0.904293 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401212HJ female - RTCT86718 1 108769289 108853796 84508 Loss 1 0.886863 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400201PK male - QXHS37749 1 108769289 108853796 84508 Loss 1 0.90099 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401943KA male - OWWR99794 1 108769289 108853796 84508 Loss 1 0.896802 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401497PR male - RNZZ40210 1 108769289 108853796 84508 Loss 1 0.892494 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401940SJ male - BOWS70612 1 108769289 108853796 84508 Loss 1 0.915567 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401975VD male - DEXW71048 1 108769289 108853796 84508 Loss 1 0.907778 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400833BB male - AEUU95723 1 108769289 108853796 84508 Loss 1 0.909115 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402073LQ male - NKNM36178 1 108769289 108853796 84508 Loss 1 0.889655 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400668TD male - GVAB34760 1 108769289 108853796 84508 Loss 1 0.905992 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400453LN male - EGVC41637 1 108769289 108853796 84508 Loss 1 0.899623 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401939GD male - UEII10946 1 108769289 108853796 84508 Loss 1 0.888948 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401913GT male - BKPJ24282 1 108769289 108853796 84508 Loss 1 0.887303 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401458RT male - AVJL63299 1 108769289 108853796 84508 Loss 1 0.885865 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400206SC male - FIIC23299 1 108769289 108853796 84508 Loss 1 0.890274 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400843FL female - APOV19283 1 108769289 108853796 84508 Loss 1 0.892806 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400203NA male - PNEQ37885 1 108769289 108853796 84508 Loss 1 0.894104 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401781SL male - IJLN67055 1 108769289 108853796 84508 Loss 1 0.901308 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400982BS female - ROFY65487 1 108769289 108853796 84508 Loss 1 0.902023 8 12072 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - NBPF4 1 NBPF4 1 - - 35960(1|Kidd(2008)) "84508(8|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "84508(38|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Kidd(2010b),Kidd(2008),Perry(2008b),Pinto(2011),Teague(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400683EC female - RCQQ88896 14 40964560 41049052 84493 Loss 1 0.927977 76 1126 chas 89.7 Loss 94.39 Loss 94.38 Loss LossLossLoss 53 94.52 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.1 - - 0 - 0 - - - - - - 53 - 0 "84493(6|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" RPZL61223 14 106692891 106777331 84441 Loss 1 0.881224 59 1455 chas 99.99 Loss 69.1 Loss 100 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "84441(47|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 9 46 - 0 "84441(270|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" HHAT36498 8 89525219 89609616 84398 Loss 1 0.919028 56 1534 chas 99.99 Loss 99.1 Loss 99.1 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 8q21.3 - - 0 - 0 - - - 73347(1|Shaikh(2009)) 924(1|Pang(2010)) - 57 - 0 "75297(6|Pang(2010),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400574MA female "research_filter, clinical_filter" WVDE74465 7 38294088 38378483 84396 Loss 1 0.883818 89 959 chas 0 - 48.57 Loss 100 Loss #NAME? 115 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "84396(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 29 115 - 0 "84396(60|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 401838EN male "research_filter, clinical_filter" AMDW97336 1 75362308 75446663 84356 Gain 3 0.897854 61 1405 chas 81.57 Gain 96.48 Gain 0 - GainGain- 48 NA NA NA "ChAS,IPN,NXS" 1p31.1 - - 0 - 0 - - - - - - 48 - 0 "59622(3|Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401281BP male "research_filter, clinical_filter" YPPO84595 5 177166127 177250474 84348 Gain 4 0.9039 15 6024 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "84348#1%""Sotos syndrome"":2326144" - "84348(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "84348(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401857VG male - PAFA79672 5 21097004 21181345 84342 Gain 3 0.918424 44 1961 chas 80.16 Gain 100 Gain 0 - GainGain- 38 NA NA NA "ChAS,IPN,NXS" 5p14.3 - - 0 - 0 - - - 1699(1|Park(2010)) - - 38 - 0 "84342(15|Redon(2006),Itsara(2009),Perry(2008b),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 402033WD male research_filter KIAD94479 5 177166127 177250458 84332 Gain 4 0.913882 14 6487 chas 0 - 0 - 0 - --- 7 0 - - ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "84332#1%""Sotos syndrome"":2326144" - "84332(11|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "84332(36|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400359OR female - NUMT67226 10 47062985 47147301 84317 Loss 1 0.85795 108 788 chas 0 - 0 - 0 - --- 83 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 288(1|Tuzun(2005)) "84317(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 83 - 0 "84317(211|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401079HJ female clinical_filter PAIU48992 7 38286515 38370792 84278 Gain 3 0.896099 96 887 chas 45.33 Gain 91.49 Gain 96.67 Gain GainGainGain 115 69.28 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "84278(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 38 115 - 0 "84278(60|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" GPMX61747 19 43089956 43174156 84201 Loss 1 0.910201 60 1427 chas 99.65 Loss 99.81 Loss 99.82 Loss LossLossLoss 40 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.2 - CEACAM8 1 CEACAM8 1 - - - "84201(6|McKernan(2009),Redon(2006),Simon-Sanchez(2007),Zogopoulos(2007))" "1529(4|de Smith(2007),Pang(2010),Levy(2007),Bentley(2008))" - 40 - 0 "84201(29|McKernan(2009),Redon(2006),Levy(2007),Schuster(2010),Durbin(2010),Bentley(2008),Pang(2010),Shaikh(2009),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" VBEF49630 5 46293139 46377315 84177 Loss 1 0.910574 22 4008 chas 0 - 100 Loss 100 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 5p11 - - 0 - 0 - - - "84177(4|Conrad(2009),McKernan(2009),Shaikh(2009))" - - 12 - 0 "84177(25|Teague(2010),Conrad(2009),McKernan(2009),Durbin(2010),Wilson(2010),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400022WA female research_filter VUND65965 6 84144318 84228464 84147 Loss 1 0.920511 76 1121 chas 90.48 Loss 95.23 Loss 95.23 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.2 - PRSS35 1 PRSS35 1 - - - - - - 63 - 0 553(3|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" GTDY31038 6 29837158 29921061 83904 Gain 3 0.890389 46 1864 chas 0.4 Gain 41.08 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HLA-H,HCG4B" 3 "HLA-A,HLA-H,HCG4B" 3 HLA-A - - "83904(66|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" "320(2|Bentley(2008),Mills(2006))" 47 68 - 0 "83904(388|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401860TJ male research_filter ZMDC73313 14 106693442 106777331 83890 Gain 3 0.899971 58 1471 chas 100 Gain 70.51 Gain 100 Gain GainGainGain 46 100 Gain "BS,GTC" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "83890(47|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 9 45 - 0 "83890(267|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401165SB female "research_filter, clinical_filter" IBGK33359 14 106693442 106777331 83890 Loss 1 0.886764 58 1471 chas 100 Loss 68.65 Loss 68.65 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "83890(47|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 9 45 - 0 "83890(267|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" NTSS59900 14 106693442 106777210 83769 Gain 4 0.926059 56 1523 chas 100 Gain 100 Gain 100 Gain GainGainGain 45 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q32.33 - LINC00226 1 LINC00226 1 - - - "83769(47|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1266(2|Park(2010)) 9 45 - 0 "83769(267|Teague(2010),Korbel(2007),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Sebat(2004),Wong(2007),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" MAKG95944 1 120549755 120633435 83681 Loss 1 0.853206 96 880 chas 0 - 0 - 0 - --- 13 0 - - ChAS "1p11.2,1p12" - NOTCH2 1 NOTCH2 1 NOTCH2 - - "83681(6|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),Park(2010),Wheeler(2008))" - 100 13 - 0 "83681(51|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Campbell(2011),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 400041LJ male clinical_filter YMNO36133 3 21259435 21343091 83657 Gain 3 0.90323 62 1371 chas 97.34 Gain 100 Gain 0 - GainGain- 73 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "83657(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 73 - 0 "83657(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" WXKO33327 3 21259435 21343091 83657 Gain 3 0.901896 62 1371 chas 95.36 Gain 64.29 Gain 0 - GainGain- 73 NA NA NA "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "83657(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 73 - 0 "83657(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400496BL female "research_filter, clinical_filter" CLWS25417 5 177143920 177227553 83634 Loss 1 0.912675 14 6433 chas 0 - 84.77 Loss 0 - -Loss- 8 49.09 "Loss,Gain" BS "ChAS,NXS" 5q35.3 - FAM153A 1 FAM153A 1 - "83634#1%""Sotos syndrome"":2326144" - "83634(8|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 8 - 0 "83634(26|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_yes 401661HD male research_filter BYSK29073 Y 28339935 28423497 83563 Gain 2 0.86019 131 642 chas 25.71 Gain 0 - 0 - Gain-- 43 NA NA NA "ChAS,IPN" Yq11.23 - - 0 - 0 - - - 83563(1|McCarroll(2008)) - 100 43 - 0 "83563(9|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" IDVO19613 X 89691649 89775201 83553 Loss 1 0.856187 24 3632 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - 1(1|Levy(2007)) - 100 25 - 0 "83553(6|Teague(2010),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401434VN female - VIXQ67410 6 302261 385771 83511 Gain 3 0.884708 145 579 chas 0 - 42.87 Gain 0 - -Gain- 92 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "83511(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 92 - 0 "83511(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401297KC male "research_filter, clinical_filter" RDPM47345 7 38294983 38378483 83501 Gain 3 0.87405 88 959 chas 0 - 0 - 0 - --- 113 0 - - ChAS 7p14.1 - TARP 1 TARP 1 - - - "83501(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 28 113 - 0 "83501(59|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no affy6_no 400554WB male clinical_filter GPXE42967 14 22855145 22938641 83497 Loss 1 0.850245 96 878 chas 0 - 0 - 0 - --- 58 0 - - ChAS 14q11.2 - - 0 - 0 - - - "83497(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 58 - 0 "83497(87|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no affy6_no 400006DK female clinical_filter NNNK99860 11 51183549 51267021 83473 Loss 1 0.899506 16 5564 chas 0 - 0 - 0 - --- 23 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "83473(8|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" 463(1|Wang(2008)) - 23 - 0 "83473(48|Ju(2010),Conrad(2009),Wang(2008),Durbin(2010),Locke(2006),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400439IM female - RBTV68848 19 55251902 55335199 83298 Loss 1 0.900959 25 3470 chas 42.32 Loss 44.8 Loss 0 - LossLoss- 33 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 KIR3DL1 - - "83298(45|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 32 - 0 "83298(125|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" FPHR45460 5 177143920 177227216 83297 Loss 1 0.90153 12 7572 chas 0 - 85.11 Loss 0 - -Loss- 7 49.28 Loss BS "ChAS,NXS" 5q35.3 - FAM153A 1 FAM153A 1 - "83297#1%""Sotos syndrome"":2326144" - "83297(6|de Smith(2007),Kidd(2008),McCarroll(2008),Shaikh(2009),Conrad(2009))" - 100 7 - 0 "83297(22|Teague(2010),Conrad(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_yes 401104DM female research_filter WPZH96755 3 41795199 41878400 83202 Loss 1 0.902903 78 1080 chas 100 Loss 99.56 Loss 100 Loss LossLossLoss 42 92.24 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.1 - ULK4 1 ULK4 1 - - - "7586(4|Conrad(2009),McKernan(2009),Bentley(2008))" - 20 42 - 0 "57306(16|Kidd(2008),Conrad(2009),McKernan(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400072GR male "research_filter, clinical_filter" RCXD61683 12 6805206 6888380 83175 Gain 3 0.902501 68 1241 chas 100 Gain 99.86 Gain 100 Gain GainGainGain 31 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "LAG3,MLF2,PTMS,C12orf53,COPS7A" 5 "LAG3,MLF2,PTMS,C12orf53,COPS7A" 5 - - - 1932(1|Conrad(2009)) 1(1|Mills(2006)) - 31 - 0 "83175(14|Conrad(2009),Wong(2007),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401465TB male "research_filter, clinical_filter" NKHQ61532 7 38294983 38378132 83150 Gain 3 0.893957 87 966 chas 0 - 74.18 Gain 99.35 Gain #NAME? 112 100 Gain "BS,GTC" "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "83150(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 28 112 - 0 "83150(59|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" YCEN33630 7 38294983 38378132 83150 Gain 3 0.882939 87 966 chas 0 - 53.7 Gain 0 - -Gain- 112 49.93 Gain GTC "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "83150(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 28 112 - 0 "83150(59|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" RBTV68848 5 101014287 101097361 83075 Loss 1 0.930292 56 1510 chas 92.86 Loss 93.19 Loss 93.22 Loss LossLossLoss 58 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - - 0 - 0 - - - 4266(1|Conrad(2009)) 920(1|Conrad(2009)) - 58 - 0 "83075(9|Conrad(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401182OC male "research_filter, clinical_filter" TBRP43796 1 108925790 109008819 83030 Loss 1 0.911076 16 5535 chas 0 - 0 - 0 - --- 11 69.54 Loss BS ChAS 1p13.3 - NBPF6 1 NBPF6 1 - - 930(1|Kidd(2008)) "83030(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" 126(1|Wheeler(2008)) 100 11 - 0 "83030(42|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no affy6_yes 401894PD male - ZJPO23473 1 108925790 109008819 83030 Loss 1 0.895008 16 5535 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - NBPF6 1 NBPF6 1 - - 930(1|Kidd(2008)) "83030(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" 126(1|Wheeler(2008)) 100 11 - 0 "83030(42|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 401173AI male - LRBG51365 X 127627552 127710563 83012 Loss 1 0.936635 36 2371 chas 100 Loss 0 - 0 - Loss-- 36 NA NA NA "ChAS,IPN" Xq25 - - 0 - 0 - - - - - - 35 - 0 "41764(5|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400886MP female "research_filter, clinical_filter" ZPIM60940 12 131731944 131814934 82991 Loss 1 0.913718 24 3608 chas 100 Loss 96.71 Loss 100 Loss LossLossLoss 77 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400802DP female research_filter GZBA26596 12 131731944 131814934 82991 Loss 1 0.920337 24 3608 chas 100 Loss 100 Loss 100 Loss LossLossLoss 77 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400150SS female research_filter UFJQ31039 12 131731944 131814934 82991 Loss 1 0.916393 24 3608 chas 93.61 Loss 100 Loss 100 Loss LossLossLoss 77 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401551MB male research_filter YMWQ49708 12 131731944 131814934 82991 Loss 1 0.909208 24 3608 chas 93.61 Loss 97.51 Loss 100 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401403TD male research_filter YPKU53656 12 131731944 131814934 82991 Loss 1 0.902335 24 3608 chas 99.86 Loss 100 Loss 100 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402022SM female research_filter ZBJH32901 12 131731944 131814934 82991 Loss 1 0.930817 24 3608 chas 99.86 Loss 99.13 Loss 100 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401900RJ female research_filter STES59258 12 131731944 131814934 82991 Loss 1 0.930534 24 3608 chas 99.86 Loss 100 Loss 100 Loss LossLossLoss 77 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401616WP female research_filter IJLN67055 12 131731944 131814934 82991 Loss 1 0.929368 24 3608 chas 99.86 Loss 45.71 Loss 0 - LossLoss- 77 NA NA NA "ChAS,IPN,NXS" 12q24.33 - - 0 - 0 - - 34708(1|Korbel(2007)) "82991(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 61 77 - 0 "82991(91|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400982BS female research_filter UAYA68179 7 38294983 38377925 82943 Gain 3 0.890327 86 975 chas 0 - 73.14 Gain 100 Gain #NAME? 112 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "82943(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 28 112 - 0 "82943(59|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401729AC female "research_filter, clinical_filter" LETQ64470 22 42889664 42972591 82928 Gain 3 0.897205 36 2369 chas 47.77 Gain 0 - 0 - Gain-- 42 50.98 Gain BS "ChAS,IPN" 22q13.2 - "SERHL2,RRP7A,RRP7B,SERHL" 4 "SERHL2,RRP7A,RRP7B,SERHL" 4 - - - "82928(17|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "549(5|Wheeler(2008),Matsuzaki(2009))" 59 42 - 0 "82928(89|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401812HG male research_filter TOTG24684 1 49914804 49997674 82871 Loss 1 0.922667 56 1506 chas 96.29 Loss 99.42 Loss 99.97 Loss LossLossLoss 28 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 28 - 0 "82871(4|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" XHZD61935 1 49914804 49997674 82871 Loss 1 0.91392 56 1506 chas 96.99 Loss 98.47 Loss 99.97 Loss LossLossLoss 28 NA NA NA "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 28 - 0 "82871(4|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" QCLE90373 1 49914826 49997674 82849 Loss 1 0.92148 55 1534 chas 97.01 Loss 100 Loss 100 Loss LossLossLoss 28 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 28 - 0 "82849(4|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401053MF female "research_filter, clinical_filter" RDPM47345 X 143505943 143588790 82848 Loss 0 0.815201 14 6372 chas 0 - 0 - 0 - --- 16 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 16 - 0 677(2|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400554WB male - VZCC67569 1 248605739 248688572 82834 Gain 3 0.881292 58 1453 chas 0 - 0 - 0 - --- 30 NA NA NA ChAS 1q44 - "OR2T5,OR2T2,OR2T3,OR2G6" 4 "OR2T5,OR2T2,OR2T3,OR2G6" 4 - - "61655(2|Kidd(2008),Ahn(2009))" "82834(15|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pinto(2007),McCarroll(2008))" "1770(3|Young(2008),Park(2010),Bentley(2008))" 93 30 - 0 "82834(67|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Sebat(2004),Young(2008),Pinto(2011),Campbell(2011),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Kidd(2010b),Levy(2007),Perry(2008b),Park(2010),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400906BR male clinical_filter AVAH45014 12 60432660 60515454 82795 Loss 1 0.903855 66 1273 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 12q14.1 - - 0 - 0 - - - "50902(3|Park(2010),Matsuzaki(2009),Shaikh(2009))" - - 57 - 0 "51308(8|Park(2010),Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" YKWT45889 X 48613421 48696114 82694 Gain 2 0.939813 224 370 chas 91.81 Gain 0 - 0 - Gain-- 35 95.96 Gain "BS,GTC,IP6" "ChAS,IPN" Xp11.23 - "GLOD5,PCSK1N,HDAC6,ERAS,GATA1" 5 "GLOD5,PCSK1N,HDAC6,ERAS,GATA1" 5 GATA1 - - 82694(1|de Smith(2007)) "1562(10|Conrad(2009),Matsuzaki(2009))" - 35 - 0 "82694(6|Kidd(2008),Durbin(2010),De(Smith_2007),Shaikh(2009),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400094RS male "research_filter, clinical_filter" YBMF74034 2 98079569 98162176 82608 Gain 4 0.923855 18 4859 chas 20.2 Gain 99.88 Gain 0 - GainGain- 11 25.94 Gain IP6 "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401806DL male research_filter VKJV88264 2 98079569 98162176 82608 Loss 1 0.904405 18 4859 chas 100 Loss 0 - 0 - Loss-- 11 25.38 Loss BS "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401950MD male research_filter LYLG55293 2 98079569 98162176 82608 Loss 1 0.898104 18 4859 chas 28.76 Loss 0 - 0 - Loss-- 11 25.94 Loss "BS,IP6" "ChAS,IPN" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 4000657TM female research_filter AYLS39762 2 98079569 98162176 82608 Gain 4 0.918495 18 4859 chas 28.76 Gain 28.75 Gain 0 - GainGain- 11 25.94 Gain IP6 "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400663MD female research_filter XQAG43010 2 98079569 98162176 82608 Gain 4 0.931254 18 4859 chas 28.5 Gain 99.88 Gain 0 - GainGain- 11 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400953MR female research_filter CQAD90614 2 98079569 98162176 82608 Gain 4 0.920338 18 4859 chas 28.5 Gain 40.87 Gain 0 - GainGain- 11 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401346FJ female research_filter FPUC66465 2 98079569 98162176 82608 Gain 4 0.936939 18 4859 chas 100 Gain 28.75 Gain 0 - GainGain- 11 NA NA NA "ChAS,IPN,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400827MM male research_filter TRSR14168 2 98079569 98162176 82608 Gain 4 0.936626 18 4859 chas 0 - 100 Gain 0 - -Gain- 11 0 - - "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_no 401908YM male research_filter VPWL90389 2 98079569 98162176 82608 Gain 4 0.931108 18 4859 chas 0 - 28.75 Gain 0 - -Gain- 11 25.94 Gain IP6 "ChAS,NXS" 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_yes affy6_yes 401912HD male research_filter DUEF32956 2 98079569 98162176 82608 Loss 1 0.885941 18 4859 chas 0 - 0 - 0 - --- 11 25.94 Loss "BS,IP6" ChAS 2q11.2 - "ANKRD36B,LOC100506123" 2 "ANKRD36B,LOC100506123" 2 - - - "82608(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "82608(56|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_yes 401190WC male - MOBN67062 7 38295932 38378483 82552 Loss 1 0.89788 86 971 chas 0 - 90.37 Loss 91.51 Loss #NAME? 112 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "82552(23|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 27 112 - 0 "82552(59|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400569WC female "research_filter, clinical_filter" YKWT45889 21 47092744 47175182 82439 Loss 1 0.924428 59 1421 chas 91.93 Loss 95.97 Loss 95.97 Loss LossLossLoss 59 99.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q22.3 - - 0 - 0 - - - - 1(1|Levy(2007)) - 59 - 0 5750(5|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 400094RS male "research_filter, clinical_filter" GQSZ37539 5 97043561 97125988 82428 Loss 1 0.901586 48 1753 chas 52.62 Loss 55.55 Loss 59.65 Loss LossLossLoss 58 66.55 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "82428(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 783(1|Bentley(2008)) - 58 - 0 "82428(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" SVIC15912 5 97043561 97125988 82428 Loss 1 0.888706 48 1753 chas 52.62 Loss 45.5 Loss 0 - LossLoss- 58 66.55 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5q15 - - 0 - 0 - - - "82428(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 783(1|Bentley(2008)) - 58 - 0 "82428(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401113MJ female "research_filter, clinical_filter" ENVJ37912 2 51320546 51402934 82389 Loss 1 0.930922 56 1497 chas 95.94 Loss 97.95 Loss 97.96 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - 2084(1|Pang(2010)) - - 64 - 0 "82389(7|Itsara(2009),Pang(2010),Wong(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400532MH male "research_filter, clinical_filter" NFIQ53983 16 15316619 15399001 82383 Gain 3 0.87144 85 980 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 16p13.11 - - 0 - 0 - - - "82383(3|Matsuzaki(2009),Perry(2008))" - 100 6 - 0 "82383(7|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2008),Korbel(2007),Pinto(2011))" TRUE TRUE ipn_no algo_no NA 401719RL female clinical_filter LETQ64470 3 161874300 161956676 82377 Gain 3 0.914812 71 1176 chas 100 Gain 100 Gain 100 Gain GainGainGain 69 98.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "82377(5|Conrad(2009),Pinto(2007),Matsuzaki(2009),Shaikh(2009),Zogopoulos(2007))" - - 69 - 0 "82377(12|Teague(2010),Jakobsson(2008),Conrad(2009),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" YPPO84595 16 74384245 74466566 82322 Loss 1 0.887369 21 4116 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82322(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 14 - 0 "82322(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401857VG male - VOAZ29383 10 14983911 15066222 82312 Gain 3 0.888347 90 924 chas 88.09 Gain 47.76 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 10p13 - "MEIG1,DCLRE1C" 2 "MEIG1,DCLRE1C" 2 DCLRE1C - - "82312(9|Korbel(2007),Jakobsson(2008),Itsara(2009),Park(2010),Shaikh(2009),Mills(2006))" - 62 43 - 0 "82312(27|Wong(2007),Jakobsson(2008),Pinto(2011),Itsara(2009),Durbin(2010),Park(2010),Korbel(2007),Locke(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400834SS female "research_filter, clinical_filter" QKSF16477 6 95524543 95606811 82269 Loss 1 0.909872 67 1246 chas 99.99 Loss 96.01 Loss 100 Loss LossLossLoss 60 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "82269(3|Itsara(2009),Pinto(2007),Zogopoulos(2007))" 316(1|Bentley(2008)) - 60 - 0 "82269(18|Itsara(2009),Jakobsson(2008),Durbin(2010),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" CRTB70467 16 74384245 74466419 82175 Loss 1 0.883658 20 4325 chas 0 - 0 - 0 - --- 13 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400577MK female - ZCOM63077 16 74384245 74466419 82175 Loss 1 0.889053 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401936BA male - SBQG40276 16 74384245 74466419 82175 Loss 1 0.894151 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400145BL female - QBLX62038 16 74384245 74466419 82175 Loss 1 0.885594 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401681MS female - VHGW31501 16 74384245 74466419 82175 Loss 1 0.88702 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401819BS female - LOOD16085 16 74384245 74466419 82175 Loss 1 0.89776 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400376SJ female - ZMNN35179 16 74384245 74466419 82175 Loss 1 0.910158 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400430KV male - KKRR12131 16 74384245 74466419 82175 Loss 1 0.888689 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401952UH male - ZMDC73313 16 74384245 74466419 82175 Gain 4 0.926475 20 4325 chas 0 - 80.79 Gain 0 - -Gain- 13 67.83 Gain BS "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 401165SB female research_filter MRAO63769 16 74384245 74466419 82175 Gain 4 0.934834 20 4325 chas 0 - 81.41 Gain 0 - -Gain- 13 67.83 Gain BS "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400093BL female research_filter SKLJ58672 16 74384245 74466419 82175 Gain 4 0.930231 20 4325 chas 0 - 85.04 Gain 0 - -Gain- 13 67.83 Gain BS "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400639RP male research_filter PIAG15925 16 74384245 74466419 82175 Gain 3 0.912873 20 4325 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "82175(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 13 - 0 "82175(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400995MS female - MLUO94199 18 136227 218394 82168 Gain 3 0.885074 116 714 chas 2.13 Gain 67.29 Gain 100 Gain GainGainGain 44 58.77 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - "THOC1,USP14" 2 "THOC1,USP14" 2 - - - 10665(1|Park(2010)) - - 44 - 0 "65431(13|Park(2010),Kidd(2008),Wilson(2010),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" XQAG43010 14 22848656 22930808 82153 Loss 1 0.865766 76 1095 chas 0 - 45.03 Loss 100 Loss #NAME? 57 NA NA NA "ChAS,NXS,PTK" 14q11.2 - - 0 - 0 - - - "82153(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 57 - 0 "82153(88|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400953MR female "research_filter, clinical_filter" RAQB29487 16 6927470 7009582 82113 Loss 1 0.929379 241 342 chas 100 Loss 100 Loss 100 Loss LossLossLoss 94 NA NA NA "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - "82113(3|Matsuzaki(2009),Zogopoulos(2007))" 561(1|Pang(2010)) - 94 - 0 "82113(12|Itsara(2009),Pang(2010),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401746WW male "research_filter, clinical_filter" DEUS78198 3 21261077 21343091 82015 Gain 3 0.903639 60 1390 chas 61.16 Gain 100 Gain 0 - GainGain- 70 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "82015(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 70 - 0 "82015(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401721CP male "research_filter, clinical_filter" JHGL98054 6 126946392 127028397 82006 Loss 1 0.923611 36 2343 chas 88.28 Loss 94.15 Loss 94.14 Loss LossLossLoss 27 NA NA NA "ChAS,IPN,NXS,PTK" 6q22.32 - - 0 - 0 - - - - - - 27 - 0 82006(1|Wong(2007)) TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" AVAH45014 10 47067413 47149411 81999 Loss 1 0.869772 110 752 chas 0 - 0 - 0 - --- 84 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "81999(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 83 - 0 "81999(206|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401401BA male clinical_filter QRKX79081 10 47067468 47149411 81944 Loss 1 0.86511 109 758 chas 0 - 0 - 0 - --- 82 100 Loss "GTC,IP6" ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "81944(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 82 - 0 "81944(206|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400631SJ male clinical_filter KSNB36135 10 47067468 47149411 81944 Loss 1 0.856731 109 758 chas 0 - 0 - 0 - --- 82 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "81944(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 82 - 0 "81944(206|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401677MM female clinical_filter USUN51593 3 34728945 34810784 81840 Loss 1 0.913889 36 2338 chas 75.52 Loss 97.5 Loss 0 - LossLoss- 35 94.99 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 3p22.3 - - 0 - 0 - - - 5313(1|Shaikh(2009)) - - 35 - 0 "81840(11|Pinto(2011),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" FNMA81925 1 144949962 145031762 81801 Gain 3 0.868483 131 629 chas 0 - 0 - 0 - --- 46 0 - - ChAS 1q21.1 - PDE4DIP 1 PDE4DIP 1 - - - "81801(11|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Park(2010),Ju(2010),Kim(2009))" "1903(8|Pang(2010),Wheeler(2008),McKernan(2009),Ahn(2009),Bentley(2008))" 44 46 - 0 "81801(119|Teague(2010),Korbel(2007),Ju(2010),Campbell(2011),Bentley(2008),Pang(2010),Pinto(2011),Locke(2006),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Sebat(2004),Wong(2007),Perry(2008),Sharp(2005),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400171BJ male clinical_filter JVBB89605 1 2619888 2701630 81743 Loss 1 0.909642 12 7431 chas 0 - 0 - 0 - --- 1 0 - - ChAS 1p36.32 50001(1|clone) TTC34 1 TTC34 1 - "81743#1%""1p36 microdeletion syndrome"":5408761" - "81743(14|Conrad(2009),Ahn(2009),Jakobsson(2008),Ju(2010),Pang(2010),Mills(2006))" "4327(9|Pang(2010),Conrad(2009),Levy(2007),Ahn(2009),Mills(2006))" 27 1 - 0 "81743(73|Conrad(2009),Ahn(2009),Jakobsson(2008),Ju(2010),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Perry(2008b),Pinto(2011),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400650RM male - JPDY25055 11 55386772 55468512 81741 Gain 3 0.877048 92 898 chas 0 - 97.99 Gain 0 - -Gain- 48 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "80697(2|Kidd(2008),Korbel(2007))" "81741(76|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "81741(751|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401102RD male "research_filter, clinical_filter" YKSB12189 19 55283916 55365617 81702 Loss 1 0.901889 38 2208 chas 0 - 41.95 Loss 0 - -Loss- 39 NA NA NA "ChAS,NXS" 19q13.42 - "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 "KIR3DL2,KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 5 KIR3DL1 - - "81702(52|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 39 - 0 "81702(127|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 401390DG male "research_filter, clinical_filter" YTCX24219 X 6746228 6827831 81604 Loss 1 0.913096 132 622 chas 55.56 Loss 0 - 0 - Loss-- 62 NA NA NA "ChAS,IPN" Xp22.31 - - 0 - 0 - "81604#1%""Steroid sulphatase deficiency (STS)"":1725741" - "81604(7|Wang(2007),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" - - 62 - 0 "81604(8|Wang(2007),Pinto(2007),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" VXMJ58338 3 21259435 21340863 81429 Gain 3 0.887506 60 1380 chas 61.54 Gain 68 Gain 0 - GainGain- 71 NA NA NA "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "81429(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 71 - 0 "81429(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400044HS female "research_filter, clinical_filter" WHSN55625 10 51822386 51903756 81371 Loss 1 0.900928 21 4068 chas 0 - 0 - 0 - --- 9 0 - - ChAS 10q11.23 - "FLJ31813,FAM21B,FAM21A" 3 "FLJ31813,FAM21B,FAM21A" 3 - - - "81371(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 8 - 0 "81371(21|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401354KM male - HGZO79179 10 51822386 51903756 81371 Loss 1 0.909707 21 4068 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10q11.23 - "FLJ31813,FAM21B,FAM21A" 3 "FLJ31813,FAM21B,FAM21A" 3 - - - "81371(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 8 - 0 "81371(21|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401151RJ male - SVIC15912 10 14984290 15065646 81357 Gain 3 0.888182 78 1056 chas 60.17 Gain 0 - 0 - Gain-- 41 74.68 Gain "BS,IP6" "ChAS,IPN" 10p13 - "MEIG1,DCLRE1C" 2 "MEIG1,DCLRE1C" 2 DCLRE1C - - "81357(9|Korbel(2007),Jakobsson(2008),Itsara(2009),Park(2010),Shaikh(2009),Mills(2006))" - 62 41 - 0 "81357(27|Wong(2007),Jakobsson(2008),Pinto(2011),Itsara(2009),Durbin(2010),Park(2010),Korbel(2007),Locke(2006),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401113MJ female "research_filter, clinical_filter" IJLN67055 9 93616391 93697702 81312 Gain 3 0.906917 120 683 chas 99.77 Gain 97.91 Gain 99.9 Gain GainGainGain 102 NA NA NA "ChAS,IPN,NXS,PTK" 9q22.2 - SYK 1 SYK 1 - - - 14346(3|Mills(2006)) - - 102 - 0 "81312(19|Levy(2007),Wong(2007),Bentley(2008),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400982BS female "research_filter, clinical_filter" UUAC53094 1 215448508 215529780 81273 Loss 1 0.914559 69 1195 chas 99.99 Loss 100 Loss 100 Loss LossLossLoss 62 94.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q41 - - 0 - 0 - - - "8851(4|Wang(2008),Park(2010),McCarroll(2008),Altshuler(2010))" - - 62 - 0 "50554(14|Wong(2007),Wang(2008),Durbin(2010),Kidd(2008),Altshuler(2010),Campbell(2011),Park(2010),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400849SH male "research_filter, clinical_filter" UBKP24592 15 43914627 43995896 81270 Loss 1 0.872133 52 1593 chas 29.75 Loss 12.79 Loss 100 Loss LossLossLoss 22 NA NA NA "ChAS,IPN,NXS,PTK" 15q15.3 - "CKMT1A,CATSPER2" 2 "CKMT1A,CATSPER2" 2 - - - "81270(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 22 - 0 "81270(38|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401513KC male "research_filter, clinical_filter" AGBJ55549 10 47068146 47149411 81266 Loss 1 0.855137 108 759 chas 0 - 0 - 0 - --- 81 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "81266(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 81 - 0 "81266(206|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 402016HZ male clinical_filter JMWD59875 5 120664697 120745932 81236 Loss 1 0.927708 61 1353 chas 100 Loss 100 Loss 100 Loss LossLossLoss 73 NA NA NA "ChAS,IPN,NXS,PTK" 5q23.1 - - 0 - 0 - - - "81236(3|de Smith(2007),McKernan(2009),Shaikh(2009))" "169(2|Wheeler(2008),Hinds(2005))" - 73 - 0 "81236(15|McKernan(2009),Durbin(2010),Hinds(2006),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402048WB female "research_filter, clinical_filter" BOER26307 15 43914736 43995896 81161 Loss 1 0.884498 50 1656 chas 29.66 Loss 8.92 Loss 99.68 Loss LossLossLoss 22 99.97 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q15.3 - "CKMT1A,CATSPER2" 2 "CKMT1A,CATSPER2" 2 - - - "81161(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Matsuzaki(2009),Kidd(2008),Altshuler(2010))" 784(2|Perry(2008)) 100 22 - 0 "81161(38|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400571WV female "research_filter, clinical_filter" SXNO44692 17 43574213 43655357 81145 Loss 1 0.920077 21 4057 chas 0 - 0 - 100 Loss #NAME? 15 NA NA NA "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22892#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81145(2|Stefansson(2005),Kidd(2008))" "81145(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81145(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401949MN male research_filter GVAB34760 17 43574213 43655357 81145 Loss 1 0.907652 21 4057 chas 0 - 100 Loss 100 Loss #NAME? 15 NA NA NA "ChAS,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22892#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81145(2|Stefansson(2005),Kidd(2008))" "81145(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81145(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400453LN male research_filter NWRU68440 17 43574213 43655331 81119 Loss 1 0.915779 20 4269 chas 77.15 Loss 93.27 Loss 83.95 Loss LossLossLoss 15 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401064FR male research_filter HXSU46589 17 43574213 43655331 81119 Loss 1 0.918028 20 4269 chas 0 - 0 - 100 Loss #NAME? 15 77.35 Loss BS "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401299ST female research_filter KIAD94479 17 43574213 43655331 81119 Loss 1 0.906207 20 4269 chas 0 - 0 - 100 Loss #NAME? 15 77.35 Loss BS "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400359OR female research_filter CAEK98371 17 43574213 43655331 81119 Loss 1 0.913677 20 4269 chas 0 - 100 Loss 100 Loss #NAME? 15 77.4 Loss "BS,GTC" "ChAS,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400243CK male research_filter GTRU40344 17 43574213 43655331 81119 Loss 1 0.896764 20 4269 chas 0 - 0 - 83.95 Loss #NAME? 15 77.35 Loss BS "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400134WK_1 male research_filter LAYE10086 17 43574213 43655331 81119 Loss 1 0.904265 20 4269 chas 0 - 0 - 0 - --- 15 77.35 Loss BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400141CC female - WCSO50334 17 43574213 43655331 81119 Loss 1 0.913589 20 4269 chas 0 - 0 - 0 - --- 15 77.4 Loss "BS,GTC" ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400073HT male - RYUR49963 17 43574213 43655331 81119 Loss 1 0.903309 20 4269 chas 0 - 0 - 0 - --- 15 77.4 Loss "BS,GTC" ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400177SJ male - BHQW11777 17 43574213 43655331 81119 Loss 1 0.893361 20 4269 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401027KW male - OAGJ33866 17 43574213 43655331 81119 Loss 1 0.903505 20 4269 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401265CB male - APGE11753 17 43574213 43655331 81119 Loss 1 0.905367 20 4269 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81119(2|Stefansson(2005),Kidd(2008))" "81119(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81119(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401017SC female - REUG17486 17 43574214 43655331 81118 Loss 1 0.896465 19 4506 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "81118(2|Stefansson(2005),Kidd(2008))" "81118(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 15 - 0 "81118(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401576WC female - ROCO41006 10 134558200 134639294 81095 Gain 3 0.907635 54 1530 chas 43.51 Gain 24.94 Gain 0 - GainGain- 26 NA NA NA "ChAS,IPN,NXS" 10q26.3 - "INPP5A,C10orf92,NKX6-2" 3 "INPP5A,C10orf92,NKX6-2" 3 - - - "81095(9|Conrad(2009),Jakobsson(2008),Ju(2010),McKernan(2009),Pang(2010),Pinto(2007),Park(2010))" "4435(16|Matsuzaki(2009),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Wang(2008),Park(2010),Mills(2006))" - 25 - 0 "81095(76|Teague(2010),Wong(2007),Jakobsson(2008),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Park(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" YQHR22161 10 46966534 47047572 81039 Loss 1 0.848191 96 853 chas 99.99 Loss 0 - 0 - Loss-- 58 0 - - "ChAS,IPN" 10q11.22 - "GPRIN2,SYT15" 2 "GPRIN2,SYT15" 2 - - "37254(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "81039(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 58 - 0 "81039(187|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400845ML female "research_filter, clinical_filter" OVRI44012 10 46966534 47047572 81039 Loss 1 0.856739 96 853 chas 0 - 0 - 0 - --- 58 NA NA NA ChAS 10q11.22 - "GPRIN2,SYT15" 2 "GPRIN2,SYT15" 2 - - "37254(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "81039(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 58 - 0 "81039(187|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400083TG male clinical_filter BDQN41691 16 74371266 74452023 80758 Gain 3 0.918572 22 3845 chas 0 - 93.42 Gain 0 - -Gain- 10 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "80758(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 97 10 - 0 "80758(91|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401602PR male research_filter UKBP75340 X 120009891 120090575 80685 Loss 1 0.890776 33 2521 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "80685(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 38 0 - 0 "80685(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400059SV female clinical_filter XBAT84080 X 120009892 120090575 80684 Loss 1 0.908212 32 2602 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "80684(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 38 0 - 0 "80684(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" TRUE TRUE ipn_no algo_no NA 400186WC female clinical_filter CWFZ39975 X 120009892 120090575 80684 Gain 3 0.894873 32 2602 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 "CT47A7,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 12 - - - "80684(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 38 0 - 0 "80684(9|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400598DA female - QKSF16477 19 55298567 55379245 80679 Loss 1 0.885284 49 1680 chas 43.69 Loss 61.68 Loss 0 - LossLoss- 48 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "80679(49|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 48 - 0 "80679(107|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" BTJZ41884 19 55297870 55378508 80639 Loss 1 0.89423 47 1753 chas 44.57 Loss 79.02 Loss 0 - LossLoss- 46 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "80639(49|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 46 - 0 "80639(107|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400068PW female "research_filter, clinical_filter" YJHX17222 1 49917084 49997674 80591 Loss 1 0.918607 54 1520 chas 99.73 Loss 99.82 Loss 100 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 26 - 0 "80591(4|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" TAVH54072 8 43424103 43504663 80561 Loss 1 0.900367 24 3502 chas 0 - 50.07 Loss 91.26 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 8p11.1 - - 0 - 0 - - - "80561(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 13 - 0 "80561(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400948EV female research_filter UXJM82913 8 43424103 43504663 80561 Loss 1 0.88249 24 3502 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "80561(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 13 - 0 "80561(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401359HF male - FPLE23103 8 43424103 43504663 80561 Loss 1 0.893614 24 3502 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "80561(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 13 - 0 "80561(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400337HG male - HAAE15834 8 43424103 43504649 80547 Loss 1 0.885489 23 3661 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "80547(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 13 - 0 "80547(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401899MB male - QYVK49015 1 49917167 49997674 80508 Loss 1 0.921639 53 1548 chas 99.12 Loss 99.87 Loss 100 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 1p33 - AGBL4 1 - 0 - - - 20518(1|Shaikh(2009)) - - 25 - 0 "80508(4|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" ROCO41006 16 80760862 80841294 80433 Loss 1 0.911132 80 1018 chas 77.94 Loss 80.73 Loss 89.14 Loss LossLossLoss 75 NA NA NA "ChAS,IPN,NXS,PTK" 16q23.2 - CDYL2 1 CDYL2 1 - - 1272(1|McKernan(2009)) 1160(1|McKernan(2009)) 555(1|Conrad(2009)) - 75 - 0 "80433(14|Conrad(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400336BG male "research_filter, clinical_filter" ORNW53006 17 43574908 43655331 80424 Loss 1 0.894168 18 4730 chas 0 - 100 Loss 84.68 Loss #NAME? 13 78.02 Loss BS "ChAS,NXS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "80424(2|Stefansson(2005),Kidd(2008))" "80424(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 13 - 0 "80424(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400494ML female research_filter LOOD16085 17 43574908 43655331 80424 Loss 1 0.903083 18 4730 chas 0 - 0 - 100 Loss #NAME? 13 NA NA NA "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "80424(2|Stefansson(2005),Kidd(2008))" "80424(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 13 - 0 "80424(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400376SJ female research_filter EXZC47846 17 43574908 43655331 80424 Loss 1 0.898632 18 4730 chas 0 - 0 - 0 - --- 13 78.02 Loss BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "80424(2|Stefansson(2005),Kidd(2008))" "80424(42|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 13 - 0 "80424(128|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400468OB female - XSMN99460 11 90794665 90875084 80420 Loss 1 0.935696 68 1200 chas 92.84 Loss 100 Loss 92.99 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 11q14.3 - - 0 - 0 - - - 1432(1|Perry(2008)) - - 59 - 0 "80420(6|Teague(2010),Redon(2006),Perry(2008),Durbin(2010),Perry(2008b),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401235IA male "research_filter, clinical_filter" FPLE23103 14 106868273 106948691 80419 Gain 3 0.892782 40 2062 chas 10.8 Gain 91.97 Gain 0 - GainGain- 70 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "80419(64|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 17 70 - 0 "80419(256|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400337HG male research_filter RCQQ88896 8 6158781 6239164 80384 Loss 1 0.928316 70 1164 chas 100 Loss 100 Loss 100 Loss LossLossLoss 118 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" "8p23.1,8p23.2" - - 0 - 0 - - "7721(2|Pang(2010),Korbel(2007))" "80384(18|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Matsuzaki(2009),Park(2010),Pinto(2007),McCarroll(2005),Shaikh(2009),McCarroll(2008))" "1482(3|Conrad(2009),Matsuzaki(2009))" - 118 - 0 "80384(39|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Conrad(2006),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),McCarroll(2008),Park(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" QKSF16477 16 35183776 35264157 80382 Loss 1 0.924135 10 8931 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 16p11.1 - - 0 - 0 - - - "63054(8|Conrad(2009),Ahn(2009),Cooper(2008),Shaikh(2009),Ju(2010))" - - 4 - 0 "80382(28|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),Durbin(2010),Kidd(2008),Wilson(2010),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401749DJ male - REUG17486 7 142413410 142493639 80230 Gain 3 0.883858 117 691 chas 13.23 Gain 48.26 Gain 91 Gain GainGainGain 83 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PRSS1,TRY6,PRSS2" 3 "PRSS1,TRY6,PRSS2" 3 "PRSS1,PRSS2" - - "80230(14|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" - 57 82 - 0 "80230(54|Wang(2007),Wong(2007),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" ELWV13238 17 44196447 44276618 80172 Loss 1 0.868655 80 1014 chas 27.7 Loss 0 - 0 - Loss-- 77 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - "13759#1%""17q21.3 recurrent microdeletion syndrome"":577740" 80172(1|Kidd(2008)) "80172(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 77 - 0 "80172(230|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401013GJ male "research_filter, clinical_filter" WHSN55625 11 37754660 37834730 80071 Gain 3 0.899397 52 1570 chas 79.81 Gain 99.77 Gain 0 - GainGain- 41 83.57 Gain "BS,IP6" "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) 1(1|Levy(2007)) - 41 - 0 "72412(18|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" MUIH56067 11 37754660 37834730 80071 Gain 3 0.901822 52 1570 chas 83.57 Gain 91.55 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) 1(1|Levy(2007)) - 41 - 0 "72412(18|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" ZVZK64221 11 37754660 37834730 80071 Gain 3 0.90389 52 1570 chas 79.81 Gain 91.55 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) 1(1|Levy(2007)) - 41 - 0 "72412(18|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401911FL male "research_filter, clinical_filter" OAGJ33866 11 37754660 37834730 80071 Gain 3 0.903442 52 1570 chas 70.5 Gain 91.55 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) 1(1|Levy(2007)) - 41 - 0 "72412(18|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" RXRT66436 11 37754660 37834730 80071 Gain 3 0.898732 52 1570 chas 70.5 Gain 91.55 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) 1(1|Levy(2007)) - 41 - 0 "72412(18|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" JSIF57066 20 25664664 25744711 80048 Gain 3 0.900979 80 1013 chas 99.4 Gain 85.93 Gain 0 - GainGain- 37 88.27 Gain "BS,IP6" "ChAS,IPN,NXS" 20p11.1 - "FAM182B,ZNF337" 2 "FAM182B,ZNF337" 2 - - - "38526(5|Conrad(2009),Jakobsson(2008),Ju(2010))" 180(1|Ahn(2009)) 15 36 - 0 "80048(23|Conrad(2009),Ahn(2009),Jakobsson(2008),Ju(2010),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400512LR female "research_filter, clinical_filter" QCXI89270 1 86917017 86997055 80039 Gain 3 0.911259 98 825 chas 94.4 Gain 94.71 Gain 100 Gain GainGainGain 77 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p22.3 - "CLCA2,CLCA1" 2 "CLCA2,CLCA1" 2 - - - - - 8 77 - 0 "11706(6|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" XPRZ52054 14 106863507 106943492 79986 Gain 3 0.892521 40 2050 chas 23.78 Gain 98.43 Gain 0 - GainGain- 72 15.03 Gain IP6 "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "79986(62|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 21 72 - 0 "79986(240|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400611GG male research_filter SBJN54268 8 16445975 16525917 79943 Loss 1 0.915287 52 1567 chas 100 Loss 100 Loss 100 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - - 0 - 0 - - - "79943(7|Jakobsson(2008),Korbel(2007),Pinto(2007),Redon(2006),Perry(2008))" 451(1|Park(2010)) - 62 - 0 "79943(13|Korbel(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" NCJU46793 3 21260938 21340863 79926 Gain 3 0.898413 59 1378 chas 62.69 Gain 71.69 Gain 0 - GainGain- 69 95.21 Gain GTC "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "79926(7|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Shaikh(2009))" - - 69 - 0 "79926(13|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" EHLK43437 17 44212824 44292742 79919 Loss 1 0.856102 71 1141 chas 98.41 Loss 0 - 0 - Loss-- 78 100 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79919(1|Kidd(2008)) "79919(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79919(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401192MJ male "research_filter, clinical_filter" OTAJ32230 17 44212824 44292742 79919 Loss 1 0.861362 71 1141 chas 98.41 Loss 0 - 0 - Loss-- 78 100 Loss IP6 "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79919(1|Kidd(2008)) "79919(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79919(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400785AK female "research_filter, clinical_filter" ZWJR15881 17 44212824 44292742 79919 Loss 1 0.862837 71 1141 chas 47.96 Loss 0 - 0 - Loss-- 78 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79919(1|Kidd(2008)) "79919(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79919(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" PDHC59420 17 44212824 44292742 79919 Loss 1 0.855577 71 1141 chas 47.96 Loss 0 - 0 - Loss-- 78 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79919(1|Kidd(2008)) "79919(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79919(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" AEUU95723 17 44212824 44292742 79919 Loss 1 0.873451 71 1141 chas 0 - 0 - 0 - --- 78 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79919(1|Kidd(2008)) "79919(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79919(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 402073LQ male clinical_filter CHSN35204 8 15944307 16024221 79915 Loss 1 0.92506 162 496 chas 88.33 Loss 94.12 Loss 94.13 Loss LossLossLoss 76 89.46 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "79915(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 76 - 0 "79915(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" YQHR22161 10 47067413 47147301 79889 Loss 1 0.853307 106 760 chas 100 Loss 0 - 0 - Loss-- 82 0 - - "ChAS,IPN" 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "79889(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 81 - 0 "79889(202|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400845ML female "research_filter, clinical_filter" CVRD94421 8 15944307 16024164 79858 Loss 1 0.930533 160 502 chas 88.4 Loss 92.3 Loss 92.3 Loss LossLossLoss 76 89.52 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "79858(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 76 - 0 "79858(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400586RD male "research_filter, clinical_filter" SXNO44692 8 15944307 16024164 79858 Loss 1 0.930646 160 502 chas 88.4 Loss 94.19 Loss 98.31 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "79858(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 76 - 0 "79858(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401949MN male "research_filter, clinical_filter" YLSX27992 17 44212824 44292676 79853 Loss 1 0.862829 70 1157 chas 98.41 Loss 0 - 100 Loss Loss-Loss 78 100 Loss "BS,GTC,IP6" "ChAS,IPN,PTK" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79853(1|Kidd(2008)) "79853(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79853(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" WXKO33327 17 44212824 44292676 79853 Loss 1 0.863711 70 1157 chas 0 - 0 - 0 - --- 78 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79853(1|Kidd(2008)) "79853(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 78 - 0 "79853(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400496BL female clinical_filter NINK42890 8 15944307 16024144 79838 Loss 1 0.914803 159 505 chas 88.42 Loss 90.03 Loss 94.22 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "79838(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 76 - 0 "79838(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" FGSE34256 1 189173235 189252936 79702 Loss 1 0.920549 60 1350 chas 98.51 Loss 96.75 Loss 96.74 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - "79702(6|Conrad(2009),Pinto(2007),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 1(1|Levy(2007)) - 44 - 0 "71512(27|Conrad(2009),Redon(2006),Durbin(2010),Shaikh(2009),Perry(2008))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" ILTL12466 5 175570798 175650471 79674 Gain 3 0.897509 45 1810 chas 39.76 Gain 43.27 Gain 0 - GainGain- 52 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q35.2 - LOC643201 1 LOC643201 1 - "79674#1%""Sotos syndrome"":2326144" - "79674(24|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" - 42 52 - 0 "79674(87|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400124FR male research_filter YTCX24219 6 21959456 22039120 79665 Loss 1 0.910271 142 565 chas 91.35 Loss 92.84 Loss 99.73 Loss LossLossLoss 111 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.3 - LINC00340 1 LINC00340 1 - - - "7558(4|Park(2010),Conrad(2009),Conrad(2005),Mills(2006))" - - 111 - 0 "79665(11|Conrad(2009),Wong(2007),Conrad(2006),Durbin(2010),Park(2010),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" PDHC59420 12 173787 253433 79647 Gain 3 0.898751 75 1076 chas 69.78 Gain 74.86 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 12p13.33 - "IQSEC3,LOC574538" 2 "IQSEC3,LOC574538" 2 - - - "79647(16|Conrad(2009),Jakobsson(2008),Perry(2008),Matsuzaki(2009),Ju(2010),Park(2010))" "462(2|Park(2010),Levy(2007))" 18 43 - 0 "79647(33|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2008),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" DMPI37172 14 22858572 22938126 79555 Loss 1 0.859015 88 914 chas 0 - 0 - 100 Loss #NAME? 52 NA NA NA "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "79555(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 52 - 0 "79555(87|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 400287BP male "research_filter, clinical_filter" KAYE11117 3 65888144 65967673 79530 Gain 3 0.89949 88 914 chas 97.17 Gain 98.59 Gain 98.59 Gain GainGainGain 67 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.1 - MAGI1 1 - 0 - - - - 114(1|Bentley(2008)) - 67 - 0 "65814(4|Itsara(2009),Kidd(2008),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400686BM male "research_filter, clinical_filter" MMSK97554 5 99234994 99314515 79522 Loss 1 0.908139 56 1445 chas 100 Loss 100 Loss 100 Loss LossLossLoss 76 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - - 0 - 0 - - - - - - 76 - 0 "79522(22|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Perry(2008b),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401091HS male "research_filter, clinical_filter" IJCV29609 17 44212824 44292319 79496 Loss 1 0.863313 69 1169 chas 98.4 Loss 0 - 0 - Loss-- 77 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79496(1|Kidd(2008)) "79496(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 77 - 0 "79496(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" ERUW26412 17 44212824 44292319 79496 Loss 1 0.864037 69 1169 chas 98.4 Loss 0 - 0 - Loss-- 77 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79496(1|Kidd(2008)) "79496(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 77 - 0 "79496(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" YKER13969 17 44212824 44292319 79496 Loss 1 0.87781 69 1169 chas 0 - 0 - 0 - --- 77 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 79496(1|Kidd(2008)) "79496(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 77 - 0 "79496(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 401372RR male clinical_filter EHXC97365 13 64312744 64392221 79478 Gain 3 0.88976 55 1471 chas 52.61 Gain 57.87 Gain 0 - GainGain- 46 NA NA NA "ChAS,IPN,NXS" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 18270(1|Kidd(2008)) "79478(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 86 46 - 0 "79478(11|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" VUCC31552 Y 28344490 28423925 79436 Loss 0 0.862085 124 645 chas 67.09 Loss 0 - 0 - Loss-- 44 0 - - "ChAS,IPN" Yq11.23 - - 0 - 0 - - - 79436(1|McCarroll(2008)) - 100 44 - 0 "79436(8|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400109LJ male "research_filter, clinical_filter" OOYJ75103 11 55374135 55453563 79429 Gain 3 0.875728 99 810 chas 0 - 49.77 Gain 0 - -Gain- 62 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "78385(2|Kidd(2008),Korbel(2007))" "79429(70|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 62 - 0 "79429(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401672FD female "research_filter, clinical_filter" UEII10946 6 78962293 79041720 79428 Loss 1 0.93792 29 2836 chas 83.2 Loss 91.35 Loss 81.56 Loss LossLossLoss 123 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "79428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 123 - 0 "79428(822|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401913GT male "research_filter, clinical_filter" UJRA83281 13 22424071 22503440 79370 Gain 3 0.914898 64 1259 chas 93.56 Gain 96.29 Gain 96.29 Gain GainGainGain 70 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.11 - - 0 - 0 - - - - "896(2|Levy(2007),McKernan(2009))" - 70 - 0 "25963(6|Kidd(2008),McKernan(2009),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" FSLR52955 6 162782848 162862192 79345 Loss 1 0.932712 92 871 chas 93.3 Loss 96.62 Loss 96.62 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 - 0 PARK2 - - "79345(13|Jakobsson(2008),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" 793(1|Perry(2008)) - 70 PARK2#asd_candidate 1 "79345(29|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Pinto(2007),Shaikh(2009),Redon(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" UZKE50615 2 194908561 194987880 79320 Loss 1 0.911038 44 1844 chas 100 Loss 99.96 Loss 100 Loss LossLossLoss 67 81.07 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q32.3 - - 0 - 0 - - - "53763(6|Redon(2006),Matsuzaki(2009),Levy(2007),McKernan(2009),Pang(2010),Shaikh(2009))" 133(1|McKernan(2009)) - 66 - 0 "79320(16|Teague(2010),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400789KV male "research_filter, clinical_filter" ZDRZ89201 2 194908561 194987880 79320 Loss 1 0.918927 44 1844 chas 95.06 Loss 97.52 Loss 97.52 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 2q32.3 - - 0 - 0 - - - "53763(6|Redon(2006),Matsuzaki(2009),Levy(2007),McKernan(2009),Pang(2010),Shaikh(2009))" 133(1|McKernan(2009)) - 66 - 0 "79320(16|Teague(2010),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401855RE male "research_filter, clinical_filter" CRTB70467 2 56040232 56119548 79317 Loss 1 0.887999 96 834 chas 58.26 Loss 58.65 Loss 100 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p16.1 - EFEMP1 1 EFEMP1 1 EFEMP1 - - 1595(1|McKernan(2009)) "736(4|Wang(2008),Wheeler(2008),Ahn(2009),Bentley(2008))" 1 53 - 0 "12353(28|Ahn(2009),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400577MK female "research_filter, clinical_filter" GEZQ95890 7 16150501 16229753 79253 Loss 1 0.928438 76 1056 chas 93.96 Loss 96.97 Loss 96.97 Loss LossLossLoss 44 93.95 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.2 - ISPD 1 - 0 - - - "3354(7|Conrad(2009),Ahn(2009),Ju(2010),Wang(2008),Park(2010),Kim(2009),Mills(2006))" 491(4|Matsuzaki(2009)) - 44 - 0 "74419(57|Ju(2010),Ahn(2009),Conrad(2009),Wang(2008),Durbin(2010),Park(2010),Wilson(2010),Pinto(2011),Kim(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" QKZI23426 6 257049 336254 79206 Loss 1 0.857062 126 633 chas 28.98 Loss 0 - 0 - Loss-- 52 NA NA NA "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "79206(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 52 - 0 "79206(53|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400943DV female "research_filter, clinical_filter" YDUL84017 X 154048490 154127640 79151 Gain 3 0.898771 192 414 chas 75.02 Gain 0 - 0 - Gain-- 29 99.57 Gain "GTC,IP6" "ChAS,IPN" Xq28 - "CXorf68,F8,F8A3,F8A2,H2AFB3,H2AFB1,F8A1,MIR1184-1,MIR1184-2,MIR1184-3" 10 "CXorf68,F8,F8A3,F8A2,H2AFB3,H2AFB1,F8A1,MIR1184-1,MIR1184-2,MIR1184-3" 10 F8 - - "79151(5|Levy(2007),Matsuzaki(2009),Shaikh(2009))" 936(1|Matsuzaki(2009)) 12 29 - 0 "79151(12|Durbin(2010),Levy(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" SXXB40252 17 13393828 13472971 79144 Gain 3 0.902336 88 909 chas 99.58 Gain 99.95 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 17p12 - HS3ST3A1 1 HS3ST3A1 1 - - - 79144(1|Gusev(2009)) 106(1|Mills(2006)) - 61 - 0 "79144(6|Gusev(2009),Wong(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401495NR male "research_filter, clinical_filter" IAMC34091 16 74372889 74452024 79136 Gain 4 0.92289 21 3956 chas 0 - 45.94 Gain 0 - -Gain- 11 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "79136(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 97 10 - 0 "79136(91|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 402067KS female research_filter QCXI89270 16 74372889 74452023 79135 Loss 1 0.888804 20 4165 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "79135(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 97 10 - 0 "79135(91|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Teague(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400558BL female - RYUR49963 10 47063105 47142216 79112 Loss 1 0.855735 103 775 chas 0 - 0 - 0 - --- 80 93.54 Loss GTC ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 168(1|Tuzun(2005)) "79112(34|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 80 - 0 "79112(210|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400177SJ male clinical_filter WPKS46597 1 189684041 189763124 79084 Loss 1 0.910095 64 1255 chas 100 Loss 94.39 Loss 94.38 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - "61941(6|Wang(2007),Redon(2006),Conrad(2005),Conrad(2009),Kidd(2008),McCarroll(2005))" - 2 66 - 0 "79084(27|Conrad(2009),Redon(2006),Wang(2007),Kidd(2010b),Itsara(2009),Conrad(2006),Durbin(2010),Kidd(2008),Cooper(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400732MA female "research_filter, clinical_filter" SYHV89014 6 140780242 140859280 79039 Loss 1 0.92863 44 1838 chas 100 Loss 86.59 Loss 100 Loss LossLossLoss 40 NA NA NA "ChAS,IPN,NXS,PTK" 6q24.1 - - 0 - 0 - - - 2045(1|Park(2010)) - - 40 - 0 "79039(6|Park(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" MLUO94199 4 148742131 148821136 79006 Loss 1 0.910746 72 1112 chas 100 Loss 100 Loss 100 Loss LossLossLoss 40 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q31.23 - ARHGAP10 1 ARHGAP10 1 - - - - - - 40 - 0 "2913(2|Banerjee(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" BOER26307 11 55373995 55452996 79002 Gain 3 0.891895 101 790 chas 0 - 99.87 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77958(2|Kidd(2008),Korbel(2007))" "79002(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "79002(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400571WV female "research_filter, clinical_filter" FCXX78522 11 55363327 55442305 78979 Gain 3 0.885453 84 951 chas 0 - 86.36 Gain 0 - -Gain- 51 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4C11,OR4S2" 4 "OR4P4,OR4C6,OR4C11,OR4S2" 4 - - "77025(2|Kidd(2008),Korbel(2007))" "78979(62|Sebat(2004),Itsara(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" 372(1|Young(2008)) - 51 - 0 "78979(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 401117GM male "research_filter, clinical_filter" XMAJ27378 11 55374019 55452996 78978 Loss 0 0.958222 100 797 chas 99.98 Loss 97.05 Loss 92.73 Loss LossLossLoss 63 99.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401100SJ female "research_filter, clinical_filter" OFVS61400 11 55374019 55452996 78978 Loss 0 0.959724 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401143LK female "research_filter, clinical_filter" ZPIM60940 11 55374019 55452996 78978 Loss 0 0.95594 100 797 chas 99.98 Loss 97.05 Loss 77.58 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" YMBI36841 11 55374019 55452996 78978 Loss 0 0.956477 100 797 chas 99.98 Loss 97.05 Loss 82.2 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401321CE female "research_filter, clinical_filter" TOTG24684 11 55374019 55452996 78978 Loss 0 0.964099 100 797 chas 99.98 Loss 97.05 Loss 96.84 "Gain,Loss" "LossLossGain,Loss" 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" FNMA81925 11 55374019 55452996 78978 Loss 0 0.961964 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400171BJ male "research_filter, clinical_filter" WQLL63278 11 55374019 55452996 78978 Loss 0 0.96271 100 797 chas 99.98 Loss 97.05 Loss 93.88 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400503HD male "research_filter, clinical_filter" SBST92406 11 55374019 55452996 78978 Loss 0 0.962164 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401926MR_1 male "research_filter, clinical_filter" TFBW53379 11 55374019 55452996 78978 Loss 0 0.96424 100 797 chas 99.98 Loss 97.05 Loss 90.89 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" CLWS25417 11 55374019 55452996 78978 Loss 0 0.958532 100 797 chas 99.98 Loss 97.05 Loss 85.09 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401661HD male "research_filter, clinical_filter" SUUF34898 11 55374019 55452996 78978 Loss 0 0.957185 100 797 chas 99.98 Loss 96.95 Loss 81.93 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400669LD male "research_filter, clinical_filter" OSRU53198 11 55374019 55452996 78978 Loss 0 0.95856 100 797 chas 99.98 Loss 97.05 Loss 82.47 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400854SG male "research_filter, clinical_filter" TJGR62389 11 55374019 55452996 78978 Loss 0 0.960694 100 797 chas 99.98 Loss 97.05 Loss 92.73 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" DGQM75197 11 55374019 55452996 78978 Loss 0 0.96182 100 797 chas 99.98 Loss 97.05 Loss 93.88 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" NCJU46793 11 55374019 55452996 78978 Loss 0 0.95565 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" RDBP35321 11 55374019 55452996 78978 Loss 0 0.968575 100 797 chas 99.98 Loss 97.05 Loss 82.57 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" DWHI65488 11 55374019 55452996 78978 Loss 1 0.94851 100 797 chas 99.98 Loss 96.95 Loss 77.63 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400135DR male "research_filter, clinical_filter" ZRKC95930 11 55374019 55452996 78978 Loss 0 0.950476 100 797 chas 99.84 Loss 97.05 Loss 94.58 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" PBCS27067 11 55374019 55452996 78978 Loss 0 0.94757 100 797 chas 99.98 Loss 96.95 Loss 85.61 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" WSSG80726 11 55374019 55452996 78978 Loss 0 0.953609 100 797 chas 99.98 Loss 96.95 Loss 91.51 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" WPKS46597 11 55374019 55452996 78978 Loss 0 0.955609 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400732MA female "research_filter, clinical_filter" ZYKC24489 11 55374019 55452996 78978 Loss 0 0.956156 100 797 chas 99.98 Loss 96.95 Loss 82.81 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" YJHX17222 11 55374019 55452996 78978 Loss 0 0.948176 100 797 chas 99.98 Loss 96.95 Loss 92.86 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" VVPL10652 11 55374019 55452996 78978 Loss 0 0.956867 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400871CM female "research_filter, clinical_filter" VPFM57168 11 55374019 55452996 78978 Loss 0 0.953155 100 797 chas 99.98 Loss 96.95 Loss 91.85 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401696CG male "research_filter, clinical_filter" IWRE15730 11 55374019 55452996 78978 Loss 0 0.959739 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" GWFO72077 11 55374019 55452996 78978 Loss 0 0.957134 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" VUFI80076 11 55374019 55452996 78978 Loss 0 0.951565 100 797 chas 99.98 Loss 96.95 Loss 86.66 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" OOSY20649 11 55374019 55452996 78978 Loss 0 0.955371 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401817MC female "research_filter, clinical_filter" TZSA84286 11 55374019 55452996 78978 Loss 0 0.958595 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401166WJ female "research_filter, clinical_filter" JABM59002 11 55374019 55452996 78978 Loss 0 0.958207 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400328LM female "research_filter, clinical_filter" DZXP20142 11 55374019 55452996 78978 Loss 0 0.960898 100 797 chas 99.98 Loss 97.05 Loss 79.81 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" DMPI37172 11 55374019 55452996 78978 Loss 0 0.957209 100 797 chas 99.98 Loss 94.06 Loss 85.4 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400287BP male "research_filter, clinical_filter" KJKF45195 11 55374019 55452996 78978 Loss 0 0.946882 100 797 chas 99.98 Loss 96.95 Loss 92.73 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401132CH male "research_filter, clinical_filter" UMLY49839 11 55374019 55452996 78978 Loss 0 0.952484 100 797 chas 99.98 Loss 97.05 Loss 83.84 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" TLUO25428 11 55374019 55452996 78978 Loss 0 0.942032 100 797 chas 99.84 Loss 79.93 Loss 94.57 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401836SI female "research_filter, clinical_filter" SAHS24305 11 55374019 55452996 78978 Loss 0 0.954947 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" BWCN37814 11 55374019 55452996 78978 Loss 0 0.964908 100 797 chas 99.98 Loss 97.05 Loss 92.73 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401966SR male "research_filter, clinical_filter" ZGTI52802 11 55374019 55452996 78978 Loss 0 0.959924 100 797 chas 99.98 Loss 97.05 Loss 86.83 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" GVAB34760 11 55374019 55452996 78978 Loss 1 0.858935 100 797 chas 99.98 Loss 0 - 0 - Loss-- 63 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" EGVC41637 11 55374019 55452996 78978 Loss 0 0.960822 100 797 chas 99.98 Loss 97.05 Loss 93.98 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401939GD male "research_filter, clinical_filter" FCFF79727 11 55374019 55452996 78978 Loss 0 0.967954 100 797 chas 99.98 Loss 97.05 Loss 93.88 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401384BP male "research_filter, clinical_filter" MLXC26947 11 55374019 55452996 78978 Loss 0 0.945348 100 797 chas 99.98 Loss 75.68 Loss 82.13 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" TGEC92715 11 55374019 55452996 78978 Loss 0 0.956198 100 797 chas 99.98 Loss 97.05 Loss 81.93 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 4000046CJ female "research_filter, clinical_filter" UCQK65306 11 55374019 55452996 78978 Loss 0 0.963619 100 797 chas 99.98 Loss 97.05 Loss 85.88 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" TGGX58243 11 55374019 55452996 78978 Loss 0 0.964981 100 797 chas 99.98 Loss 97.05 Loss 89.74 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400942HR male "research_filter, clinical_filter" TUOI10912 11 55374019 55452996 78978 Loss 0 0.963971 100 797 chas 99.98 Loss 97.05 Loss 91.27 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401792KR male "research_filter, clinical_filter" YPPO84595 11 55374019 55452996 78978 Loss 0 0.963555 100 797 chas 99.98 Loss 97.05 Loss 90.99 Loss LossLossLoss 63 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" XTPE89033 11 55374019 55452996 78978 Gain 3 0.87222 100 797 chas 0 - 100 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400817MB male "research_filter, clinical_filter" YWQF89241 11 55374019 55452996 78978 Gain 3 0.876512 100 797 chas 0 - 93.97 Gain 0 - -Gain- 63 9.65 Loss IP6 "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" KWJN47187 11 55374019 55452996 78978 Gain 3 0.887727 100 797 chas 0 - 100 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400821FE female "research_filter, clinical_filter" DBFY56089 11 55374019 55452996 78978 Gain 3 0.891222 100 797 chas 0 - 86.23 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400458LS female "research_filter, clinical_filter" QCXI89270 11 55374019 55452996 78978 Gain 3 0.893516 100 797 chas 0 - 99.97 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400558BL female "research_filter, clinical_filter" NRTH35283 11 55374019 55452996 78978 Gain 3 0.876134 100 797 chas 0 - 26.66 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401052BM female "research_filter, clinical_filter" XMVT70735 11 55374019 55452996 78978 Gain 3 0.886073 100 797 chas 0 - 73.22 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401873BK male "research_filter, clinical_filter" HQWW55061 11 55374019 55452996 78978 Gain 3 0.902557 100 797 chas 0 - 66.96 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400523GB female "research_filter, clinical_filter" GYLD25146 11 55374019 55452996 78978 Gain 3 0.882196 100 797 chas 0 - 24.63 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400132HN female "research_filter, clinical_filter" FSQK31243 11 55374019 55452996 78978 Gain 3 0.885061 100 797 chas 0 - 99.81 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400863SS female "research_filter, clinical_filter" FNEG58263 11 55374019 55452996 78978 Gain 3 0.873271 100 797 chas 0 - 63.1 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400836LK male "research_filter, clinical_filter" EGQB52790 11 55374019 55452996 78978 Gain 3 0.871969 100 797 chas 0 - 32.54 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400277LM female "research_filter, clinical_filter" SKLJ58672 11 55374019 55452996 78978 Gain 3 0.886215 100 797 chas 0 - 97.16 Gain 0 - -Gain- 63 86.46 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400639RP male "research_filter, clinical_filter" HXWA61262 11 55374019 55452996 78978 Gain 3 0.875246 100 797 chas 0 - 66.96 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401438HT male "research_filter, clinical_filter" VPWL90389 11 55374019 55452996 78978 Gain 3 0.878368 100 797 chas 0 - 66.4 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401912HD male "research_filter, clinical_filter" GPXE42967 11 55374019 55452996 78978 Gain 3 0.872606 100 797 chas 0 - 9.37 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400006DK female "research_filter, clinical_filter" NZSQ74406 11 55374019 55452996 78978 Gain 3 0.881424 100 797 chas 0 - 99.9 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400191MP_1 male "research_filter, clinical_filter" ZRAK81940 11 55374019 55452996 78978 Gain 3 0.880378 100 797 chas 0 - 10.05 Gain 0 - -Gain- 63 83.34 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401864CV female "research_filter, clinical_filter" BTBU94149 11 55374019 55452996 78978 Gain 3 0.877826 100 797 chas 0 - 42.77 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401177SL female "research_filter, clinical_filter" BGWX92658 11 55374019 55452996 78978 Gain 3 0.884854 100 797 chas 0 - 99.9 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401566DD male "research_filter, clinical_filter" YYJA27879 11 55374019 55452996 78978 Gain 3 0.873714 100 797 chas 0 - 83.36 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401074CM_1 female "research_filter, clinical_filter" AZMC27188 11 55374019 55452996 78978 Gain 3 0.884541 100 797 chas 0 - 61.1 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400209BS_1 female "research_filter, clinical_filter" SKOC60180 11 55374019 55452996 78978 Gain 3 0.872677 100 797 chas 0 - 99.79 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400340CD male "research_filter, clinical_filter" EMAP66239 11 55374019 55452996 78978 Gain 3 0.889413 100 797 chas 0 - 89.02 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401618HR male "research_filter, clinical_filter" TASV63603 11 55374019 55452996 78978 Gain 3 0.875339 100 797 chas 0 - 86.39 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400255CD male "research_filter, clinical_filter" HDQN23240 11 55374019 55452996 78978 Gain 3 0.88498 100 797 chas 0 - 77.02 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400136DM female "research_filter, clinical_filter" UCHK30425 11 55374019 55452996 78978 Gain 3 0.872351 100 797 chas 0 - 99.81 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400385LJ female "research_filter, clinical_filter" JSIF57066 11 55374019 55452996 78978 Gain 3 0.893516 100 797 chas 0 - 99.9 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400512LR female "research_filter, clinical_filter" MGYM61346 11 55374019 55452996 78978 Gain 3 0.879841 100 797 chas 0 - 84.79 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400974PS female "research_filter, clinical_filter" NTSS59900 11 55374019 55452996 78978 Gain 3 0.885427 100 797 chas 0 - 99.56 Gain 0 - -Gain- 63 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" YZQJ34471 11 55374019 55452996 78978 Gain 3 0.883063 100 797 chas 0 - 96.15 Gain 0 - -Gain- 63 83.34 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400482MD male "research_filter, clinical_filter" AIKT30285 11 55374019 55452996 78978 Gain 3 0.8884 100 797 chas 0 - 96.76 Gain 0 - -Gain- 63 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400618GC male "research_filter, clinical_filter" HOIC14625 11 55374019 55452996 78978 Gain 3 0.881441 100 797 chas 0 - 99.79 Gain 0 - -Gain- 63 9.65 Loss IP6 "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" UYMD11362 11 55374019 55452996 78978 Gain 3 0.875115 100 797 chas 0 - 66.09 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400030WD female "research_filter, clinical_filter" MUIH56067 11 55374019 55452996 78978 Gain 3 0.88463 100 797 chas 0 - 70.15 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400930MK female "research_filter, clinical_filter" MUBF17546 11 55374019 55452996 78978 Gain 3 0.875287 100 797 chas 0 - 87.68 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400540BM male "research_filter, clinical_filter" BYSK29073 11 55374019 55452996 78978 Gain 3 0.888842 100 797 chas 0 - 86.29 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400620MT male "research_filter, clinical_filter" RLDP86471 11 55374019 55452996 78978 Gain 3 0.871052 100 797 chas 0 - 74.71 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400329HJ female "research_filter, clinical_filter" KNEY83753 11 55374019 55452996 78978 Gain 3 0.873598 100 797 chas 0 - 100 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400411TG male "research_filter, clinical_filter" SXXB40252 11 55374019 55452996 78978 Gain 3 0.882327 100 797 chas 0 - 99.99 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401495NR male "research_filter, clinical_filter" ZQFY18932 11 55374019 55452996 78978 Gain 3 0.877244 100 797 chas 0 - 44.46 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400341GL female "research_filter, clinical_filter" QSVT75164 11 55374019 55452996 78978 Gain 3 0.87697 100 797 chas 0 - 47.47 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401791FG male "research_filter, clinical_filter" AFRT86195 11 55374019 55452996 78978 Gain 3 0.872435 100 797 chas 0 - 73.19 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400844GP male "research_filter, clinical_filter" YBSU20689 11 55374019 55452996 78978 Gain 3 0.87104 100 797 chas 0 - 99.99 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401278DM female "research_filter, clinical_filter" PUOR77387 11 55374019 55452996 78978 Gain 3 0.872354 100 797 chas 0 - 9.37 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401603HH female "research_filter, clinical_filter" HGZO79179 11 55374019 55452996 78978 Gain 3 0.876218 100 797 chas 0 - 84.85 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401151RJ male "research_filter, clinical_filter" IDKP47812 11 55374019 55452996 78978 Gain 3 0.871744 100 797 chas 0 - 27.4 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401377MA male "research_filter, clinical_filter" ZEGT44347 11 55374019 55452996 78978 Gain 3 0.87065 100 797 chas 0 - 50.25 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401609MB female "research_filter, clinical_filter" BOWS70612 11 55374019 55452996 78978 Gain 3 0.877177 100 797 chas 0 - 84.95 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401975VD male "research_filter, clinical_filter" RAQB29487 11 55374019 55452996 78978 Gain 3 0.879279 100 797 chas 0 - 83.73 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401746WW male "research_filter, clinical_filter" XZCA75295 11 55374019 55452996 78978 Gain 3 0.878138 100 797 chas 0 - 83.07 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400033KC female "research_filter, clinical_filter" VLMR80827 11 55374019 55452996 78978 Gain 3 0.878788 100 797 chas 0 - 0 - 0 - --- 63 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 401630MK female clinical_filter SLNP19984 11 55374019 55452996 78978 Gain 3 0.880376 100 797 chas 0 - 0 - 0 - --- 63 NA NA NA ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77934(2|Kidd(2008),Korbel(2007))" "78978(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 63 - 0 "78978(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401152MV female clinical_filter RAZI40834 11 55374035 55452996 78962 Gain 3 0.877802 99 805 chas 0 - 87.51 Gain 0 - -Gain- 63 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77918(2|Kidd(2008),Korbel(2007))" "78962(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 62 - 0 "78962(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400021ME_1 male "research_filter, clinical_filter" RJEG79563 11 55374035 55452996 78962 Gain 3 0.871596 99 805 chas 0 - 88.96 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77918(2|Kidd(2008),Korbel(2007))" "78962(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 62 - 0 "78962(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401543DC male "research_filter, clinical_filter" PWPH55056 6 302184 381137 78954 Gain 3 0.886848 139 572 chas 0 - 100 Gain 0 - -Gain- 85 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78954(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78954(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401804FG male "research_filter, clinical_filter" OVRI44012 6 302184 381136 78953 Gain 3 0.88411 138 576 chas 0 - 88.36 Gain 0 - -Gain- 84 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78953(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78953(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400083TG male "research_filter, clinical_filter" KIIK22313 X 143504074 143583009 78936 Loss 0 0.795459 11 7893 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 13 - 0 2455(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401496SL male - YWQF89241 6 302236 381137 78902 Gain 4 0.925687 138 575 chas 0 - 100 Gain 99.91 Gain #NAME? 85 81.18 Gain GTC "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78902(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78902(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" DEYQ16754 6 302261 381137 78877 Gain 3 0.882944 137 579 chas 0 - 26.8 Gain 100 Gain #NAME? 85 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78877(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78877(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401825TH female "research_filter, clinical_filter" JMWD59875 6 302273 381137 78865 Gain 3 0.884487 136 584 chas 0 - 99.99 Gain 0 - -Gain- 85 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78865(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78865(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 402048WB female "research_filter, clinical_filter" TQQL83388 11 55374135 55452996 78862 Gain 3 0.876491 98 813 chas 0 - 80.6 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77818(2|Kidd(2008),Korbel(2007))" "78862(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78862(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401365DJ male "research_filter, clinical_filter" FMEA92817 11 55374135 55452996 78862 Gain 3 0.873352 98 813 chas 0 - 71.3 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77818(2|Kidd(2008),Korbel(2007))" "78862(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78862(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401175FA female "research_filter, clinical_filter" SRJV59260 11 55374019 55452843 78825 Gain 3 0.880683 98 812 chas 0 - 99.9 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77781(2|Kidd(2008),Korbel(2007))" "78825(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78825(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400737GC female "research_filter, clinical_filter" PAGW82790 11 55374019 55452843 78825 Gain 3 0.885355 98 812 chas 0 - 100 Gain 0 - -Gain- 61 83.68 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77781(2|Kidd(2008),Korbel(2007))" "78825(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78825(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" DZVA59681 11 55374175 55452996 78822 Loss 1 0.863075 97 821 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77778(2|Kidd(2008),Korbel(2007))" "78822(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78822(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" PYXL51166 11 55374176 55452996 78821 Loss 1 0.870469 96 829 chas 100 Loss 0 - 0 - Loss-- 61 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401146US female "research_filter, clinical_filter" IRJE88693 11 55374176 55452996 78821 Loss 1 0.868461 96 829 chas 100 Loss 0 - 0 - Loss-- 61 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" IAEL45337 11 55374176 55452996 78821 Loss 1 0.860869 96 829 chas 100 Loss 0 - 0 - Loss-- 61 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" TRLD69151 11 55374176 55452996 78821 Loss 1 0.862236 96 829 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401514BA male "research_filter, clinical_filter" YLSX27992 11 55374176 55452996 78821 Gain 3 0.870044 96 829 chas 0 - 42.74 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400381CA female "research_filter, clinical_filter" VOUF55858 11 55374176 55452996 78821 Gain 3 0.877789 96 829 chas 0 - 99.48 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400338SR male "research_filter, clinical_filter" AOYC46859 11 55374176 55452996 78821 Gain 3 0.875412 96 829 chas 0 - 67.33 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400307HW male "research_filter, clinical_filter" YAZD71442 11 55374176 55452996 78821 Gain 3 0.873746 96 829 chas 0 - 99.99 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77777(2|Kidd(2008),Korbel(2007))" "78821(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78821(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401859GS male "research_filter, clinical_filter" BLGS11062 10 18121020 18199800 78781 Loss 1 0.882912 18 4634 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "979(2|Conrad(2009),Matsuzaki(2009))" - 100 9 - 0 "78781(9|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401714BM female - XWKR95070 6 302236 380993 78758 Gain 3 0.879076 134 592 chas 0 - 25.43 Gain 0 - -Gain- 84 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78758(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78758(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400855BD female "research_filter, clinical_filter" UJRA83281 6 302273 380993 78721 Gain 3 0.880535 132 600 chas 0 - 100 Gain 100 Gain #NAME? 84 NA NA NA "ChAS,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78721(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 84 - 0 "78721(62|Sebat(2004),Redon(2006),Ju(2010),Perry(2008b),Bentley(2008),Pang(2010),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Teague(2010),De(Smith_2007),Mills(2006),Conrad(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401361GG male "research_filter, clinical_filter" MRAO63769 11 55374135 55452843 78709 Loss 1 0.864798 96 828 chas 100 Loss 0 - 0 - Loss-- 59 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77665(2|Kidd(2008),Korbel(2007))" "78709(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "78709(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" MQVK42355 11 51126724 51205424 78701 Loss 1 0.882379 14 6053 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78701(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 13 - 0 "78701(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401203MP female - RSYQ67471 6 46074656 46153323 78668 Gain 3 0.903555 95 836 chas 89.63 Gain 100 Gain 100 Gain GainGainGain 63 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p21.1 - "ENPP4,ENPP5" 2 "ENPP4,ENPP5" 2 - - - - - - 63 - 0 15897(1|Pinto(2011)) TRUE TRUE ipn_yes algo_yes affy6_yes 400624RJ male "research_filter, clinical_filter" MTRE48443 3 161878079 161956703 78625 Gain 3 0.896986 70 1139 chas 98.66 Gain 99.32 Gain 100 Gain GainGainGain 69 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "78625(5|Conrad(2009),Pinto(2007),Matsuzaki(2009),Shaikh(2009),Zogopoulos(2007))" - - 69 - 0 "78625(12|Teague(2010),Jakobsson(2008),Conrad(2009),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400378HL female "research_filter, clinical_filter" PXVB29564 3 161878079 161956703 78625 Gain 3 0.903046 70 1139 chas 98.66 Gain 100 Gain 100 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.1 - - 0 - 0 - - - "78625(5|Conrad(2009),Pinto(2007),Matsuzaki(2009),Shaikh(2009),Zogopoulos(2007))" - - 69 - 0 "78625(12|Teague(2010),Jakobsson(2008),Conrad(2009),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" GQXG36971 10 47068685 47147301 78617 Loss 1 0.855492 102 778 chas 0 - 0 - 0 - --- 76 0 - - ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "78617(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "2191(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 76 - 0 "78617(202|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no affy6_no 401930GD male clinical_filter ALWU32623 19 55252034 55330642 78609 Loss 1 0.924483 18 4624 chas 91.6 Loss 85.06 Loss 0 - LossLoss- 29 79.41 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 "KIR2DL3,KIR3DL1,KIR2DL1,KIR2DL4" 4 KIR3DL1 - - "78609(44|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 28 - 0 "78609(121|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400595CP female research_filter OULL87238 11 55374019 55452586 78568 Gain 3 0.885968 97 818 chas 0 - 63.01 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77524(2|Kidd(2008),Korbel(2007))" "78568(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78568(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401845MJ male "research_filter, clinical_filter" DOLM19463 11 55374019 55452560 78542 Loss 0 0.954064 96 826 chas 99.98 Loss 96.94 Loss 73.41 Loss LossLossLoss 61 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401607LL male "research_filter, clinical_filter" GNXG93257 11 55374019 55452560 78542 Loss 0 0.950923 96 826 chas 99.98 Loss 88.58 Loss 92.69 Loss LossLossLoss 61 99.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" ISXJ62958 11 55374019 55452560 78542 Loss 0 0.952394 96 826 chas 99.98 Loss 97.03 Loss 92.69 Loss LossLossLoss 61 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" JGYN82468 11 55374019 55452560 78542 Loss 1 0.866765 96 826 chas 99.98 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" XSKZ13040 11 55374019 55452560 78542 Loss 1 0.879214 96 826 chas 99.98 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401824MM female "research_filter, clinical_filter" JTMA20495 11 55374019 55452560 78542 Loss 1 0.858352 96 826 chas 99.98 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" IJLN67055 11 55374019 55452560 78542 Loss 0 0.954512 96 826 chas 99.98 Loss 97.04 Loss 88.02 Loss LossLossLoss 61 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400982BS female "research_filter, clinical_filter" GYNG28087 11 55374019 55452560 78542 Gain 3 0.883452 96 826 chas 0 - 100 Gain 0 - -Gain- 61 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" OPOQ31165 11 55374019 55452560 78542 Gain 3 0.873733 96 826 chas 0 - 63.35 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400795CL female "research_filter, clinical_filter" CCNM95095 11 55374019 55452560 78542 Gain 3 0.879064 96 826 chas 0 - 97.15 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401881TJ male "research_filter, clinical_filter" ELXG87337 11 55374019 55452560 78542 Gain 3 0.872024 96 826 chas 0 - 99.78 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401634CH male "research_filter, clinical_filter" UKBP75340 11 55374019 55452560 78542 Gain 3 0.880843 96 826 chas 0 - 73.14 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400059SV female "research_filter, clinical_filter" WHSN55625 11 55374019 55452560 78542 Gain 3 0.885794 96 826 chas 0 - 93.93 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401354KM male "research_filter, clinical_filter" HAGL80690 11 55374019 55452560 78542 Gain 3 0.881033 96 826 chas 0 - 97.15 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400542EG female "research_filter, clinical_filter" HDQS55514 11 55374019 55452560 78542 Gain 3 0.874761 96 826 chas 0 - 43.08 Gain 0 - -Gain- 61 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400653GP male "research_filter, clinical_filter" ORNW53006 11 55374019 55452560 78542 Gain 3 0.876242 96 826 chas 0 - 45.87 Gain 0 - -Gain- 61 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400494ML female "research_filter, clinical_filter" MAAD53838 11 55374019 55452560 78542 Gain 3 0.880091 96 826 chas 0 - 99.79 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401517PR male "research_filter, clinical_filter" AJUD27157 11 55374019 55452560 78542 Gain 3 0.886417 96 826 chas 0 - 84.81 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401075MN female "research_filter, clinical_filter" FCIS19557 11 55374019 55452560 78542 Gain 3 0.873945 96 826 chas 0 - 99.97 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401931JL female "research_filter, clinical_filter" VZCC67569 11 55374019 55452560 78542 Gain 3 0.885992 96 826 chas 0 - 70.74 Gain 100 Gain #NAME? 61 NA NA NA "ChAS,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400906BR male "research_filter, clinical_filter" QMDZ51984 11 55374019 55452560 78542 Gain 3 0.874945 96 826 chas 0 - 64.33 Gain 0 - -Gain- 61 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401979TB male "research_filter, clinical_filter" FOMC40154 11 55374019 55452560 78542 Gain 3 0.873936 96 826 chas 0 - 0 - 0 - --- 61 83.8 Gain GTC ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 401096SL male clinical_filter ZMDC73313 11 55374019 55452560 78542 Gain 3 0.870208 96 826 chas 0 - 0 - 0 - --- 61 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 401165SB female clinical_filter LTTD14271 11 55374019 55452560 78542 Gain 3 0.884094 96 826 chas 0 - 0 - 0 - --- 61 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400050RL female clinical_filter EJLX27201 11 55374019 55452560 78542 Gain 3 0.875568 96 826 chas 0 - 0 - 0 - --- 61 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "77498(2|Kidd(2008),Korbel(2007))" "78542(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 61 - 0 "78542(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400545EW_1 female clinical_filter JTJC66263 6 294911 373440 78530 Gain 3 0.884408 108 733 chas 0.02 Loss 100 "Loss,Gain" 100 "Gain,Loss" "LossLoss,GainGain,Loss" 76 NA NA NA "ChAS,IPN,NXS,PTK" 6p25.3 - DUSP22 1 DUSP22 1 - - - "78530(22|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 76 - 0 "78530(53|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Conrad(2006),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Park(2010),Teague(2010),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" GPMX61747 13 26289649 26368072 78424 Gain 3 0.909375 118 670 chas 99.97 Gain 99.91 Gain 99.99 Gain GainGainGain 65 98.05 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q12.13 - ATP8A2 1 ATP8A2 1 - - 78424(1|Korbel(2007)) - - - 65 - 0 "78424(2|Korbel(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" JPDY25055 11 51126724 51205141 78418 Loss 1 0.907919 12 7128 chas 0 - 99.98 Loss 0 - -Loss- 12 0 - - "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_no 401102RD male research_filter XIWN71249 11 51126724 51205141 78418 Loss 1 0.894586 12 7128 chas 0 - 76.46 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401935TM female research_filter FRXS36515 11 51126724 51205141 78418 Loss 1 0.906048 12 7128 chas 0 - 100 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400769SL female research_filter QMEK60192 11 51126724 51205141 78418 Loss 1 0.905353 12 7128 chas 0 - 76.46 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401711WS male research_filter XTPE89033 11 51126724 51205141 78418 Loss 1 0.911108 12 7128 chas 0 - 0 - 0 - --- 12 0 - - ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400817MB male - SKLJ58672 11 51126724 51205141 78418 Loss 1 0.918342 12 7128 chas 0 - 0 - 0 - --- 12 0 - - ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400639RP male - ILTL12466 11 51126724 51205141 78418 Loss 1 0.909896 12 7128 chas 0 - 0 - 0 - --- 12 0 - - ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400124FR male - GYBK42448 11 51126724 51205141 78418 Loss 1 0.900349 12 7128 chas 0 - 0 - 0 - --- 12 0 - - ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401277RA female - YKLI59783 11 51126724 51205141 78418 Loss 1 0.903574 12 7128 chas 0 - 0 - 0 - --- 12 0 - - ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401919MD male - KMMD77027 11 51126724 51205141 78418 Loss 1 0.892513 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400783MJ male - IJCV29609 11 51126724 51205141 78418 Loss 1 0.894508 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401263HS female - TCTA60809 11 51126724 51205141 78418 Loss 1 0.88578 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401965TG female - XOFJ42304 11 51126724 51205141 78418 Loss 1 0.888119 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400177CG male - SMGW17663 11 51126724 51205141 78418 Loss 1 0.891287 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400362TV female - IDKP47812 11 51126724 51205141 78418 Loss 1 0.909735 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401377MA male - IDVO19613 11 51126724 51205141 78418 Loss 1 0.896154 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401434VN female - ZDRZ89201 11 51126724 51205141 78418 Loss 1 0.894738 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401855RE male - HHAT36498 11 51126724 51205141 78418 Loss 1 0.906168 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400574MA female - PAFA79672 11 51126724 51205141 78418 Loss 1 0.897194 12 7128 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 11p11.12 - - 0 - 0 - - - "78418(6|Conrad(2009),Pinto(2007),Shaikh(2009),Ju(2010))" - - 12 - 0 "78418(48|Ju(2010),Conrad(2009),Durbin(2010),Locke(2006),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402033WD male - MWKR26526 8 770837 849254 78418 Loss 1 0.926284 52 1537 chas 100 Loss 100 Loss 100 Loss LossLossLoss 58 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - - 0 - 0 - - - - "1562(5|Levy(2007),McKernan(2009),Shaikh(2009))" - 58 - 0 "78418(14|Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400225CJ male "research_filter, clinical_filter" DGQM75197 7 7201637 7279982 78346 Loss 1 0.907042 92 860 chas 95.46 Loss 97.15 Loss 97.15 Loss LossLossLoss 58 95.72 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p22.1 - C1GALT1 1 C1GALT1 1 - - - 78346(1|Pinto(2007)) 990(1|Perry(2008)) 3 58 - 0 "78346(8|Teague(2010),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Perry(2008b),Locke(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" ICDL89338 1 73007962 73086201 78240 Loss 1 0.911586 54 1476 chas 94.79 Loss 97.27 Loss 97.27 Loss LossLossLoss 51 94.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "74023(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 51 - 0 "78240(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" TASV63603 1 73007962 73086201 78240 Loss 1 0.917475 54 1476 chas 94.79 Loss 97.27 Loss 97.27 Loss LossLossLoss 51 94.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "74023(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 51 - 0 "78240(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" DQOB10223 5 115526408 115604613 78206 Loss 1 0.91182 104 759 chas 86.02 Loss 93.02 Loss 93.02 Loss LossLossLoss 84 NA NA NA "ChAS,IPN,NXS,PTK" 5q23.1 - COMMD10 1 - 0 - - - "78206(15|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Altshuler(2010),Gusev(2009),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" - 4 84 - 0 "78206(19|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Campbell(2011),Park(2010),McCarroll(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401567BD male "research_filter, clinical_filter" MRIL85955 16 74384245 74462393 78149 Loss 1 0.889929 19 4341 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "78149(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 97 11 - 0 "78149(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400705KK male - NJNE14201 19 53938321 54016460 78140 Gain 3 0.895892 118 667 chas 82.03 Gain 96.65 Gain 99.99 Gain GainGainGain 77 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "78140(6|Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 75 77 - 0 "78140(32|Ahn(2009),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401393JW male "research_filter, clinical_filter" MLUO94199 7 38292663 38370792 78130 Gain 3 0.901912 88 898 chas 0 - 48.78 Gain 0 - -Gain- 111 100 Gain "BS,GTC,IP6" "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "78130(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 33 111 - 0 "78130(57|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400508RD male "research_filter, clinical_filter" EMKM20452 7 38292663 38370792 78130 Gain 3 0.876932 88 898 chas 0 - 31.04 Gain 0 - -Gain- 111 74.41 Gain GTC "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "78130(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 33 111 - 0 "78130(57|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" DLYI64271 1 73008167 73086201 78035 Loss 1 0.905481 53 1500 chas 95.04 Loss 81.61 Loss 94.37 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "74023(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 50 - 0 "78035(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401292ER female "research_filter, clinical_filter" OCVA11195 17 44214722 44292676 77955 Loss 1 0.86476 66 1199 chas 100 Loss 0 - 0 - Loss-- 75 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 77955(1|Kidd(2008)) "77955(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 75 - 0 "77955(231|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401358VP male "research_filter, clinical_filter" BKFI83925 17 44214816 44292742 77927 Loss 1 0.857832 66 1198 chas 100 Loss 0 - 0 - Loss-- 75 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 77927(1|Kidd(2008)) "77927(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 75 - 0 "77927(231|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" WKAY66815 9 1500148 1578049 77902 Loss 1 0.933149 72 1097 chas 99.98 Loss 99.4 Loss 99.52 Loss LossLossLoss 153 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.3 - - 0 - 0 - - - "77902(3|McCarroll(2005),Pinto(2007),Conrad(2005))" 550(1|Conrad(2009)) - 153 - 0 "51401(10|Conrad(2009),Redon(2006),Itsara(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400681MC female "research_filter, clinical_filter" VUUO47049 X 145119558 145197459 77902 Gain 3 0.902047 76 1038 chas 84.86 Gain 0 - 0 - Gain-- 78 NA NA NA "ChAS,IPN" Xq27.3 - - 0 - 0 - - - - - - 78 - 0 69920(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400533BB female "research_filter, clinical_filter" XROV61149 7 78851126 78929011 77886 Gain 3 0.896713 79 998 chas 100 Gain 100 Gain 100 Gain GainGainGain 69 NA NA NA "ChAS,IPN,NXS,PTK" 7q21.11 - MAGI2 1 - 0 - - - "36800(7|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Altshuler(2010),Kidd(2008),McCarroll(2008))" - - 69 - 0 "77886(21|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Kidd(2008),Conrad(2006),Durbin(2010),Kidd(2010b),Altshuler(2010),Cooper(2008),Campbell(2011),McCarroll(2006),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401480PG male "research_filter, clinical_filter" TPCN38834 15 43890381 43968229 77849 Loss 1 0.86423 54 1468 chas 9.4 Loss 12.3 Loss 62.36 Loss LossLossLoss 23 NA NA NA "ChAS,IPN,NXS,PTK" 15q15.3 - "STRC,CATSPER2,CKMT1B" 3 "STRC,CATSPER2,CKMT1B" 3 STRC - - "77849(16|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008))" - 100 23 - 0 "77849(37|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2007),Conrad(2006),Durbin(2010),Kidd(2008),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" PTKC28903 16 32511179 32588890 77712 Loss 1 0.922525 12 7064 chas 65.09 Loss 82.53 Loss 0 - LossLoss- 19 NA NA NA "ChAS,IPN,NXS" 16p11.2 - - 0 - 0 - - 77712(1|Kidd(2008)) "77712(23|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 904(1|Ahn(2009)) 1 18 - 0 "77712(150|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_yes algo_yes NA 400442FE female research_filter UFYD24142 16 32511179 32588890 77712 Loss 1 0.909139 12 7064 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS 16p11.2 - - 0 - 0 - - 77712(1|Kidd(2008)) "77712(23|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" 904(1|Ahn(2009)) 1 18 - 0 "77712(150|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_no NA 400313DF female - OPOQ31165 1 196827842 196905516 77675 Loss 1 0.906789 61 1294 chas 62.32 Loss 93.89 Loss 93.89 Loss LossLossLoss 61 99.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.3 - CFHR4 1 CFHR4 1 - - - "77675(43|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 39 62 - 0 "77675(140|Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),McCarroll(2008),Conrad(2009),Jakobsson(2008),Alkan(2009),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" XIWN71249 1 196827842 196905516 77675 Loss 1 0.895347 61 1294 chas 62.32 Loss 100 Loss 100 Loss LossLossLoss 61 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.3 - CFHR4 1 CFHR4 1 - - - "77675(43|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Wang(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 39 62 - 0 "77675(140|Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Campbell(2011),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),McCarroll(2008),Conrad(2009),Jakobsson(2008),Alkan(2009),Perry(2008b),Wheeler(2008),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401935TM female "research_filter, clinical_filter" JVBB89605 10 51830347 51907977 77631 Loss 1 0.891484 22 3696 chas 0 - 0 - 94.58 Loss #NAME? 7 0 - - "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "77631(7|Park(2010),Conrad(2009),Matsuzaki(2009),Perry(2008))" - 100 7 - 0 "77631(25|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_no 400650RM male research_filter UWAE35667 10 51830347 51907977 77631 Loss 1 0.906872 22 3696 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "77631(7|Park(2010),Conrad(2009),Matsuzaki(2009),Perry(2008))" - 100 7 - 0 "77631(25|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401861GG male - UXJM82913 17 44214722 44292319 77598 Loss 1 0.86836 65 1212 chas 48.85 Loss 0 - 0 - Loss-- 74 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 77598(1|Kidd(2008)) "77598(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 74 - 0 "77598(231|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" NGFJ29672 14 106872841 106950429 77589 Gain 3 0.904651 40 1989 chas 75.44 Gain 82.68 Gain 0 - GainGain- 68 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "77589(64|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 18 68 - 0 "77589(252|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400269DA female research_filter RCXD61683 12 6935631 7013133 77503 Gain 3 0.902023 56 1409 chas 88.62 Gain 94.76 Gain 99.31 Gain GainGainGain 32 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.31 - "RPL13P5,USP5,GNB3,CDCA3,TPI1,LEPREL2,DSTNP2,GPR162,SPSB2" 9 "RPL13P5,USP5,GNB3,CDCA3,TPI1,LEPREL2,DSTNP2,GPR162,SPSB2" 9 "TPI1,GNB3" - - 10914(1|Kim(2009)) 855(2|Shaikh(2009)) - 32 - 0 "77503(9|Teague(2010),Wong(2007),Durbin(2010),Wilson(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401465TB male "research_filter, clinical_filter" WUMM65746 X 89449156 89526647 77492 Loss 1 0.893166 24 3369 chas 0 - 0 - 0 - --- 20 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 100 20 - 0 "72132(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400077EB female - SMGW17663 19 53938975 54016460 77486 Gain 3 0.902067 116 673 chas 98.18 Gain 95.65 Gain 100 Gain GainGainGain 75 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "77486(6|Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 74 75 - 0 "77486(32|Ahn(2009),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" KAAS48951 4 172544719 172622170 77452 Loss 1 0.931358 48 1647 chas 95.55 Loss 97.76 Loss 97.77 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 4q34.1 - - 0 - 0 - - - - - - 52 - 0 "77452(7|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401504RJ male "research_filter, clinical_filter" JPDY25055 1 73007962 73085346 77385 Loss 1 0.90089 52 1517 chas 63.91 Loss 94.07 Loss 94.06 Loss LossLossLoss 49 94.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "73168(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 49 - 0 "77385(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401102RD male "research_filter, clinical_filter" YITU99076 1 73007962 73085346 77385 Loss 1 0.915152 52 1517 chas 94.74 Loss 97.24 Loss 97.24 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "73168(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 49 - 0 "77385(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401362ME male "research_filter, clinical_filter" RQNQ20012 4 69480924 69558258 77335 Loss 1 0.892976 36 2209 chas 76.94 Loss 0 - 0 - Loss-- 19 NA NA NA "ChAS,IPN" 4q13.2 - UGT2B15 1 UGT2B15 1 - - - "72615(20|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" - 65 18 - 0 "77335(206|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401326LI female "research_filter, clinical_filter" XOFJ42304 12 133682556 133759720 77165 Gain 3 0.89267 152 511 chas 24.01 Gain 99.55 Gain 99.55 Gain GainGainGain 43 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - "ZNF140,ZNF10,ZNF268" 3 "ZNF140,ZNF10,ZNF268" 3 - - - "77165(16|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),McKernan(2009),McCarroll(2008),Park(2010),Redon(2006))" - 0 43 - 0 "77165(29|Conrad(2009),Jakobsson(2008),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),McCarroll(2008),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400177CG male "research_filter, clinical_filter" FEZX98083 8 15944307 16021468 77162 Loss 1 0.929879 158 491 chas 91.48 Loss 95.74 Loss 95.74 Loss LossLossLoss 76 92.65 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "77162(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 76 - 0 "77162(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" ZPIM60940 17 43588041 43665142 77102 Gain 3 0.897303 26 3084 chas 0 - 0 - 0 - --- 22 11.58 Gain BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "32677#1%""17q21.3 recurrent microdeletion syndrome"":577740" "77102(2|Stefansson(2005),Kidd(2008))" "77102(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 22 - 0 "77102(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400802DP female - UYPJ72832 18 28974595 29051649 77055 Gain 3 0.89107 129 601 chas 39.9 Gain 100 Gain 0 - GainGain- 73 99.98 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 18q12.1 - "DSG3,DSG4" 2 "DSG3,DSG4" 2 DSG4 - - "77055(4|McCarroll(2005),Conrad(2009),Pinto(2007),Zogopoulos(2007))" "590(3|Pang(2010),Levy(2007),Conrad(2005))" - 73 - 0 "77055(14|Conrad(2009),Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401240ML female "research_filter, clinical_filter" LWHQ31793 18 28974611 29051649 77039 Gain 3 0.88653 128 606 chas 37.29 Gain 99.99 Gain 99.99 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 18q12.1 - "DSG3,DSG4" 2 "DSG3,DSG4" 2 DSG4 - - "77039(4|McCarroll(2005),Conrad(2009),Pinto(2007),Zogopoulos(2007))" "590(3|Pang(2010),Levy(2007),Conrad(2005))" - 73 - 0 "77039(14|Conrad(2009),Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" UAVX81306 18 28974611 29051649 77039 Gain 3 0.897066 128 606 chas 94.7 Gain 94.98 Gain 100 Gain GainGainGain 73 NA NA NA "ChAS,IPN,NXS,PTK" 18q12.1 - "DSG3,DSG4" 2 "DSG3,DSG4" 2 DSG4 - - "77039(4|McCarroll(2005),Conrad(2009),Pinto(2007),Zogopoulos(2007))" "590(3|Pang(2010),Levy(2007),Conrad(2005))" - 73 - 0 "77039(14|Conrad(2009),Wong(2007),Itsara(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400643LD male "research_filter, clinical_filter" GUYS21436 4 61052115 61129136 77022 Loss 1 0.911347 49 1604 chas 73.53 Loss 88.5 Loss 94.88 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.1 - - 0 - 0 - - - - - - 43 - 0 "65774(9|Itsara(2009),Wong(2007),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400582WS female "research_filter, clinical_filter" ZIOC12306 2 13202931 13279945 77015 Gain 3 0.907452 44 1791 chas 88.22 Gain 99.31 Gain 0 - GainGain- 40 94.72 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400852WJ male research_filter MRAO63769 2 13202931 13279945 77015 Gain 4 0.955035 44 1791 chas 100 Gain 100 Gain 100 Gain GainGainGain 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400093BL female research_filter QCXI89270 2 13202931 13279945 77015 Gain 4 0.923867 44 1791 chas 100 Gain 100 Gain 0 - GainGain- 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400558BL female research_filter TRSR14168 2 13202931 13279945 77015 Gain 3 0.918283 44 1791 chas 88.22 Gain 100 Gain 0 - GainGain- 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 401908YM male research_filter JSIF57066 2 13202931 13279945 77015 Gain 3 0.921577 44 1791 chas 100 Gain 100 Gain 0 - GainGain- 40 94.72 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400512LR female research_filter OBAS32636 2 13202931 13279945 77015 Gain 3 0.908654 44 1791 chas 100 Gain 95.55 Gain 0 - GainGain- 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400249BC female research_filter TABQ91013 2 13202931 13279945 77015 Gain 3 0.904502 44 1791 chas 100 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400934LA female research_filter QSVT75164 2 13202931 13279945 77015 Gain 3 0.891253 44 1791 chas 97.75 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401791FG male research_filter QVQY90814 2 13202931 13279945 77015 Gain 3 0.894272 44 1791 chas 100 Gain 99.78 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401311GL female research_filter DMPI37172 2 13202931 13279945 77015 Gain 3 0.909825 44 1791 chas 97.75 Gain 98.87 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400287BP male research_filter VIXQ67410 2 13202931 13279945 77015 Gain 3 0.894734 44 1791 chas 97.75 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401297KC male research_filter YSDD20509 2 13202931 13279945 77015 Gain 3 0.898509 44 1791 chas 100 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400333CC female research_filter JPEZ22320 2 13202931 13279945 77015 Gain 3 0.91187 44 1791 chas 91.95 Gain 99.78 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "77015(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 40 - 0 "77015(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401149VA male research_filter WKJP80388 11 55376010 55452996 76987 Loss 0 0.961662 94 827 chas 100 Loss 96.97 Loss 90.76 Loss LossLossLoss 59 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75943(2|Kidd(2008),Korbel(2007))" "76987(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "76987(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400320RN male "research_filter, clinical_filter" GDLU88739 8 15916894 15993857 76964 Loss 1 0.90617 84 927 chas 99.89 Loss 99.94 Loss 100 Loss LossLossLoss 68 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "76964(11|Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" - - 68 - 0 "76964(22|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" YMNO36133 12 133682787 133759720 76934 Gain 3 0.897143 148 523 chas 99.86 Gain 99.94 Gain 100 Gain GainGainGain 43 100 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 12q24.33 - "ZNF140,ZNF10,ZNF268" 3 "ZNF140,ZNF10,ZNF268" 3 - - - "76934(16|Conrad(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),McKernan(2009),McCarroll(2008),Park(2010),Redon(2006))" - - 43 - 0 "76934(29|Conrad(2009),Jakobsson(2008),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),McCarroll(2008),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" EJHE40652 16 15049968 15126890 76923 Loss 1 0.88824 41 1923 chas 0 - 20.43 Loss 87.7 Loss #NAME? 59 86.16 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73772(5|Kidd(2008),Tuzun(2005))" "76923(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76923(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" FSQK31243 16 15049969 15126890 76922 Loss 1 0.893191 40 1972 chas 0 - 5.48 Loss 37.3 Loss #NAME? 59 48.36 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400863SS female "research_filter, clinical_filter" GQXG36971 16 15049969 15126890 76922 Loss 1 0.890968 40 1972 chas 0 - 38.33 Loss 76.25 Loss #NAME? 59 100 Loss "GTC,IP6" "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401930GD male "research_filter, clinical_filter" IXLI37228 16 15049969 15126890 76922 Loss 1 0.91153 40 1972 chas 0 - 49.92 Loss 76.31 Loss #NAME? 59 100 Loss "GTC,IP6" "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" CHSN35204 16 15049969 15126890 76922 Loss 1 0.903262 40 1972 chas 0 - 26.82 Loss 89.41 Loss #NAME? 59 86.16 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" KNEY83753 16 15049969 15126890 76922 Loss 1 0.908641 40 1972 chas 0 - 36.34 Loss 86.18 Loss #NAME? 59 NA NA NA "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400411TG male "research_filter, clinical_filter" FSLR52955 16 15049969 15126890 76922 Loss 1 0.897475 40 1972 chas 0 - 29.84 Loss 89.41 Loss #NAME? 59 NA NA NA "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "73771(5|Kidd(2008),Tuzun(2005))" "76922(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 85 59 - 0 "76922(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400987FB male "research_filter, clinical_filter" UJRI14149 8 15944307 16021218 76912 Loss 1 0.910151 152 509 chas 91.46 Loss 95.73 Loss 95.73 Loss LossLossLoss 73 92.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p22 - MSR1 1 MSR1 1 MSR1 - - "76912(9|Jakobsson(2008),Wang(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" 540(1|Park(2010)) - 73 - 0 "76912(19|Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Wang(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400227MM female "research_filter, clinical_filter" BGWX92658 11 89474818 89551714 76897 Loss 1 0.90555 28 2848 chas 0 - 0 - 0 - --- 14 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "76897(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 14 - 0 "76897(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no affy6_no 401566DD male clinical_filter GQSZ37539 11 89474818 89551714 76897 Loss 1 0.912549 28 2848 chas 0 - 0 - 0 - --- 14 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "76897(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 14 - 0 "76897(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no affy6_no 400455SJ female clinical_filter UAZI16039 11 89474818 89551714 76897 Loss 1 0.904793 28 2848 chas 0 - 0 - 0 - --- 14 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "76897(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 14 - 0 "76897(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no affy6_no 400625FT male clinical_filter OBWN97941 7 38293950 38370792 76843 Gain 3 0.886742 86 904 chas 0 - 49.74 Gain 0 - -Gain- 111 64.64 Gain GTC "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "76843(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 32 111 - 0 "76843(57|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400113LD female "research_filter, clinical_filter" NTSS59900 6 257340 334166 76827 Loss 1 0.869436 120 645 chas 58.45 Loss 0 - 0 - Loss-- 49 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "76827(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 49 - 0 "76827(53|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" XNUA56302 15 102212934 102289731 76798 Gain 3 0.897697 232 332 chas 39.4 Gain 86.07 Gain 99.98 Gain GainGainGain 51 85.15 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - TARSL2 1 TARSL2 1 - "76798#1%""15q26 overgrowth syndrome"":3163423" - "76798(8|Perry(2008),Matsuzaki(2009),Pang(2010),Pinto(2007),Park(2010),Zogopoulos(2007))" "535(2|Wang(2008),Levy(2007))" 20 51 - 0 "76798(20|Teague(2010),Wang(2008),Perry(2008),Itsara(2009),Levy(2007),Locke(2006),Iafrate(2004),Durbin(2010),Pang(2010),Kidd(2008),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" ACWT82545 7 111092451 111169227 76777 Loss 1 0.93036 54 1448 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.1 - IMMP2L 1 IMMP2L 1 - - - "76777(14|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009))" 183(1|Ahn(2009)) 4 35 - 0 "76777(25|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" NSZE63198 19 51116424 51193177 76754 Gain 3 0.900703 64 1218 chas 82.62 Gain 74.37 Gain 0 - GainGain- 35 89.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.33 - "SYT3,C19orf81,SHANK1" 3 "SYT3,C19orf81,SHANK1" 3 - - - "65128(6|de Smith(2007),Park(2010))" "844(2|Park(2010),Levy(2007))" 13 35 SHANK1#asd_candidate 1 "65568(24|Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Park(2010),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400724CD male "research_filter, clinical_filter" RPZL61223 14 45052811 45129527 76717 Loss 1 0.916306 57 1369 chas 100 Loss 100 Loss 100 Loss LossLossLoss 51 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "76717(2|Itsara(2009),Simon-Sanchez(2007))" - - 50 - 0 "76717(8|Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" XREB60973 12 131731944 131808586 76643 Loss 1 0.899522 22 3649 chas 37.12 Loss 54.64 Loss 100 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 12q24.33 - - 0 - 0 - - 28360(1|Korbel(2007)) "76643(37|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2005),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" "1851(5|Conrad(2009),Perry(2008),Ju(2010))" 60 71 - 0 "76643(88|Ju(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),McKernan(2009),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401084TD male research_filter DBZL89045 16 2653144 2729765 76622 Gain 3 0.891617 33 2394 chas 29.9 Gain 0 - 0 - Gain-- 19 6.62 Gain IP6 "ChAS,IPN" 16p13.3 - "PDPK1,FLJ42627,ERVK13-1,LOC652276" 4 "PDPK1,FLJ42627,ERVK13-1,LOC652276" 4 - - - "76622(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 99 19 - 0 "76622(57|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400032RC female research_filter JYQV48819 5 97043561 97120170 76610 Loss 1 0.898653 44 1781 chas 56.62 Loss 64.18 Loss 70.41 Loss LossLossLoss 54 71.18 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "76610(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 392(1|Bentley(2008)) - 54 - 0 "76610(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400449PK female "research_filter, clinical_filter" TNZB91328 5 97043561 97120170 76610 Loss 1 0.913817 44 1781 chas 56.62 Loss 64.18 Loss 64.18 Loss LossLossLoss 54 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "76610(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 392(1|Bentley(2008)) - 54 - 0 "76610(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400911GA female "research_filter, clinical_filter" IJCV29609 2 100775045 100851612 76568 Gain 3 0.905033 51 1531 chas 99.86 Gain 99.93 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" 2q11.2 - - 0 - 0 - - - - - - 50 - 0 "34997(2|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" VZJS13167 11 55376498 55452996 76499 Gain 3 0.88158 92 840 chas 0 - 33.59 Gain 0 - -Gain- 55 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75455(2|Kidd(2008),Korbel(2007))" "76499(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "76499(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400213DB female "research_filter, clinical_filter" YWSA20061 11 55376498 55452996 76499 Gain 3 0.884312 92 840 chas 0 - 61.27 Gain 0 - -Gain- 55 82.98 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75455(2|Kidd(2008),Korbel(2007))" "76499(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "76499(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" OAZH14211 11 55376498 55452996 76499 Gain 3 0.871341 92 840 chas 0 - 99.99 Gain 0 - -Gain- 55 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75455(2|Kidd(2008),Korbel(2007))" "76499(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "76499(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400246MG male "research_filter, clinical_filter" GYBK42448 11 55376498 55452996 76499 Gain 3 0.883915 92 840 chas 0 - 61.39 Gain 0 - -Gain- 55 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75455(2|Kidd(2008),Korbel(2007))" "76499(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "76499(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401277RA female "research_filter, clinical_filter" FJSF95972 11 55376498 55452996 76499 Gain 3 0.884634 92 840 chas 0 - 87.64 Gain 0 - -Gain- 55 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75455(2|Kidd(2008),Korbel(2007))" "76499(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "76499(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401020DJ female "research_filter, clinical_filter" NYDB63609 X 140609654 140686150 76497 Loss 1 0.882401 24 3325 chas 16.23 Loss 0 - 0 - Loss-- 9 0 - - "ChAS,IPN" Xq27.2 - "SPANXA2-OT1,SPANXA1,SPANXA2" 3 "SPANXA1,SPANXA2" 2 - - 76497(2|Kidd(2008)) "76497(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 100 9 - 0 "76497(19|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Campbell(2011),Locke(2006),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 400138LA female research_filter JITZ20982 14 45755849 45832343 76495 Loss 1 0.896589 56 1390 chas 100 Loss 100 Loss 100 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "30639(6|Conrad(2009),Redon(2006),Matsuzaki(2009),Altshuler(2010),Pinto(2007),McCarroll(2008))" - - 45 - 0 "76495(16|Conrad(2009),Redon(2006),Itsara(2009),Durbin(2010),Altshuler(2010),Campbell(2011),Pinto(2007),McCarroll(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401180GR male "research_filter, clinical_filter" TGWW40273 X 120731727 120808203 76477 Loss 1 0.911469 32 2467 chas 85.29 Loss 0 - 0 - Loss-- 38 NA NA NA "ChAS,IPN" Xq24 - - 0 - 0 - - - 66520(1|Shaikh(2009)) - - 38 - 0 "76477(5|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400140WM female "research_filter, clinical_filter" EMAP66239 10 35524902 35601358 76457 Gain 3 0.897936 63 1233 chas 59.68 Gain 88.72 Gain 0 - GainGain- 28 99.88 Gain "BS,IP6" "ChAS,IPN,NXS" 10p11.21 - CCNY 1 CCNY 1 - - - 3452(1|Kim(2009)) "874(4|Wang(2008),Levy(2007),Wheeler(2008),Bentley(2008))" - 28 - 0 "43135(18|Wang(2008),Kidd(2008),Kim(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401618HR male "research_filter, clinical_filter" AVKM43792 5 97043561 97120008 76448 Loss 1 0.915393 43 1820 chas 56.74 Loss 64.32 Loss 95.7 Loss LossLossLoss 53 71.12 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "76448(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 230(1|Bentley(2008)) - 53 - 0 "76448(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401246HH male "research_filter, clinical_filter" SFLX52247 15 47081724 47158150 76427 Loss 1 0.921364 104 742 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 15q21.1 - - 0 - 0 - - - - - - 56 - 0 "76427(3|Itsara(2009),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" VBEF49630 11 55376649 55452996 76348 Loss 1 0.866376 88 877 chas 100 Loss 0 - 100 Loss Loss-Loss 52 NA NA NA "ChAS,IPN,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75304(2|Kidd(2008),Korbel(2007))" "76348(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 52 - 0 "76348(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400022WA female "research_filter, clinical_filter" DZNQ84721 11 55376498 55452843 76346 Gain 3 0.87845 90 857 chas 0 - 100 Gain 0 - -Gain- 53 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75302(2|Kidd(2008),Korbel(2007))" "76346(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 53 - 0 "76346(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400866RR male "research_filter, clinical_filter" QVOH35939 3 174544362 174620694 76333 Loss 1 0.932465 73 1060 chas 96.96 Loss 98.46 Loss 98.47 Loss LossLossLoss 56 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.31 - NAALADL2 1 NAALADL2 1 - - - 1389(1|Park(2010)) 323(1|Bentley(2008)) - 56 - 0 "76333(17|Park(2010),Kidd(2008),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400291VJ male "research_filter, clinical_filter" PYWH93436 7 62849387 62925712 76326 Loss 1 0.894767 8 10903 chas 0 - 0 - 0 - --- 5 0 - - ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "76326(6|Pinto(2007),Redon(2006),Perry(2008))" 291(1|Perry(2008)) 100 5 - 0 "76326(14|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400270BD female - OTMU34006 7 62849387 62925712 76326 Loss 1 0.886269 8 10903 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "76326(6|Pinto(2007),Redon(2006),Perry(2008))" 291(1|Perry(2008)) 100 5 - 0 "76326(14|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402038MR male - CVUT48167 7 62849387 62925712 76326 Loss 1 0.902238 8 10903 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 7q11.21 - LOC100287834 1 LOC100287834 1 - - - "76326(6|Pinto(2007),Redon(2006),Perry(2008))" 291(1|Perry(2008)) 100 5 - 0 "76326(14|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401898DS male - HXSU46589 16 34577680 34653903 76224 Gain 3 0.894077 42 1859 chas 85.4 Gain 64.79 Gain 0 - GainGain- 51 100 Gain "GTC,IP6" "ChAS,IPN,NXS" "16p11.1,16p11.2" - LOC283914 1 LOC283914 1 - - 76224(1|Kidd(2008)) "76224(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - - 51 - 0 "76224(59|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2010b),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401299ST female research_filter XNQF62194 11 55386787 55462994 76208 Gain 3 0.880022 85 907 chas 0 - 57.22 Gain 0 - -Gain- 45 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75164(2|Kidd(2008),Korbel(2007))" "76208(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "76208(746|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401690HA male "research_filter, clinical_filter" RMNM29531 22 22673956 22750131 76176 Gain 3 0.892175 48 1620 chas 61.77 Gain 94.27 Gain 0 - GainGain- 78 90.86 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 22q11.22 - LOC96610 1 LOC96610 1 - "76176#1%""22q11.2 distal deletion syndrome"":1580382" - "76176(49|Wang(2007),Ahn(2009),Itsara(2009),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Park(2010),Pang(2010),Kidd(2008),Tuzun(2005),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1747(2|Park(2010)) 9 78 - 0 "76176(287|Wang(2007),Ahn(2009),Wong(2007),Durbin(2010),Kidd(2010),Teague(2010),Itsara(2009),Tuzun(2005),Locke(2006),McCarroll(2006),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),Cooper(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401068SD female research_filter YOPA81411 16 34577763 34653903 76141 Gain 3 0.887647 40 1952 chas 100 Gain 100 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" "16p11.1,16p11.2" - LOC283914 1 LOC283914 1 - - 76141(1|Kidd(2008)) "76141(39|Wang(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Pinto(2007),Ju(2010),Tuzun(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - - 50 - 0 "76141(58|Ju(2010),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2008),Perry(2008b),Altshuler(2010),Durbin(2010),Pang(2010),Kidd(2010b),Conrad(2009),Pinto(2007),Wang(2007),Campbell(2011),Tuzun(2005),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 402056KD male research_filter NFGH10073 11 55376498 55452586 76089 Loss 1 0.868218 89 864 chas 100 Loss 0 - 0 - Loss-- 53 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "75045(2|Kidd(2008),Korbel(2007))" "76089(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 53 - 0 "76089(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" WMQY51169 17 44212415 44288442 76028 Loss 1 0.880516 70 1101 chas 97.79 Loss 0 - 0 - Loss-- 72 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 76028(1|Kidd(2008)) "76028(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 72 - 0 "76028(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400364SS male "research_filter, clinical_filter" IDVO19613 17 44212415 44288442 76028 Loss 1 0.862638 70 1101 chas 0 - 0 - 0 - --- 72 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 76028(1|Kidd(2008)) "76028(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 72 - 0 "76028(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 401434VN female clinical_filter OBWN97941 5 46313315 46389339 76025 Loss 1 0.883032 28 2815 chas 0 - 0 - 0 - --- 18 0 - - ChAS 5p11 - - 0 - 0 - - - "76025(4|Conrad(2009),McKernan(2009),Shaikh(2009))" - - 18 - 0 "76025(25|Conrad(2009),Wang(2008),McKernan(2009),Durbin(2010),Wilson(2010),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 400113LD female clinical_filter QVOH35939 20 29421136 29497009 75874 Loss 1 0.869581 28 2810 chas 0 - 0 - 0 - --- 22 NA NA NA ChAS 20q11.21 - - 0 - 0 - - - "75874(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 22 - 0 "75874(18|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" TRUE TRUE ipn_no algo_no NA 400291VJ male clinical_filter PEZC72297 7 38294983 38370792 75810 Gain 3 0.88137 84 913 chas 0 - 71.41 Gain 0 - -Gain- 109 50.65 Gain GTC "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "75810(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 109 - 0 "75810(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" GHAL32977 7 38294983 38370792 75810 Gain 3 0.887645 84 913 chas 0 - 74.29 Gain 0 - -Gain- 109 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "75810(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 109 - 0 "75810(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401734PG male "research_filter, clinical_filter" FMEA92817 7 38294983 38370792 75810 Loss 1 0.886918 84 913 chas 0 - 81.46 Loss 82.07 Loss #NAME? 109 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "75810(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 109 - 0 "75810(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401175FA female "research_filter, clinical_filter" TNZB91328 7 38294983 38370792 75810 Gain 3 0.884776 84 913 chas 0 - 65.97 Gain 0 - -Gain- 109 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "75810(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 109 - 0 "75810(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400911GA female "research_filter, clinical_filter" UXJM82913 7 38294983 38370792 75810 Loss 1 0.876248 84 913 chas 0 - 45.11 Loss 99.29 Loss #NAME? 109 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "75810(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 31 109 - 0 "75810(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" DQHB62647 8 43424103 43499910 75808 Loss 1 0.89809 22 3609 chas 0 - 40.07 Loss 90.71 Loss #NAME? 11 NA NA NA "ChAS,NXS,PTK" 8p11.1 - - 0 - 0 - - - "75808(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 11 - 0 "75808(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401732HW male research_filter SBTA40047 8 43424103 43499910 75808 Loss 1 0.872807 22 3609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "75808(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 11 - 0 "75808(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401628GC female - NNNK99860 8 43424103 43499910 75808 Loss 1 0.892485 22 3609 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 8p11.1 - - 0 - 0 - - - "75808(5|Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" "492(2|Wang(2008),Levy(2007))" - 11 - 0 "75808(21|Conrad(2009),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400439IM female - OFVS61400 1 108925790 109001546 75757 Loss 1 0.898319 15 5411 chas 0 - 83.58 Loss 0 - -Loss- 11 0 - - "ChAS,NXS" 1p13.3 - NBPF6 1 NBPF6 1 - - 930(1|Kidd(2008)) "75757(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 11 - 0 "75757(41|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 401143LK female research_filter UEDI98118 5 68753608 68829335 75728 Loss 1 0.900569 74 1037 chas 97.07 Loss 99.98 Loss 97.11 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 5q13.2 - OCLN 1 OCLN 1 OCLN - - "75728(3|de Smith(2007),Sebat(2004),Perry(2008))" 1(1|Mills(2006)) - 25 - 0 "75728(36|Sebat(2004),Perry(2008),Perry(2008b),Durbin(2010),Campbell(2011),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" SSWV37655 X 61882087 61957811 75725 Loss 1 0.87655 36 2163 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq11.1 - - 0 - 0 - - - "67203(4|Pang(2010),Wang(2007),Shaikh(2009),Ju(2010))" - - 8 - 0 "67203(7|Conrad(2009),Ju(2010),Wang(2007),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401706BJ female clinical_filter QRKX79081 11 55377289 55452996 75708 Gain 3 0.874312 86 890 chas 0 - 99.35 Gain 0 - -Gain- 47 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "74664(2|Kidd(2008),Korbel(2007))" "75708(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "75708(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400631SJ male "research_filter, clinical_filter" GUWW37548 5 97050361 97125988 75628 Loss 0 0.955365 46 1680 chas 92.75 Loss 60.37 Loss 60.36 Loss LossLossLoss 54 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "75628(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 783(1|Bentley(2008)) - 54 - 0 "75628(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401195PN male "research_filter, clinical_filter" QYCK62831 17 44212824 44288442 75619 Loss 1 0.872359 68 1128 chas 45 Loss 0 - 0 - Loss-- 71 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 75619(1|Kidd(2008)) "75619(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 71 - 0 "75619(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401556KR male "research_filter, clinical_filter" VQFC85923 17 44212824 44288442 75619 Loss 1 0.867443 68 1128 chas 45 Loss 0 - 0 - Loss-- 71 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 75619(1|Kidd(2008)) "75619(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 71 - 0 "75619(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" MGJR69521 17 44212824 44288442 75619 Loss 1 0.888559 68 1128 chas 0 - 0 - 0 - --- 71 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 75619(1|Kidd(2008)) "75619(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 71 - 0 "75619(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 401251WN female clinical_filter BTJZ41884 17 44212824 44288442 75619 Loss 1 0.882606 68 1128 chas 0 - 0 - 0 - --- 71 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 75619(1|Kidd(2008)) "75619(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 71 - 0 "75619(232|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400068PW female clinical_filter KLEB18411 13 106409654 106485240 75587 Gain 3 0.912061 56 1374 chas 96.32 Gain 98.37 Gain 0 - GainGain- 62 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 13q33.2 - - 0 - 0 - - - - "645(6|Park(2010),Conrad(2009),Wheeler(2008),Matsuzaki(2009))" - 62 - 0 "75587(27|Conrad(2009),Wong(2007),Durbin(2010),Kidd(2008),Wilson(2010),Park(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" WKJP80388 7 38319296 38394857 75562 Gain 3 0.883371 96 795 chas 0 - 100 Gain 100 Gain #NAME? 112 0 - - "ChAS,NXS,PTK" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "75562(31|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" 5 112 - 0 "75562(87|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400320RN male "research_filter, clinical_filter" LHPN45961 7 38319296 38394857 75562 Loss 1 0.88796 96 795 chas 0 - 49.55 Loss 49.55 Loss #NAME? 112 NA NA NA "ChAS,NXS,PTK" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "75562(31|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" 5 112 - 0 "75562(87|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400603CJ male "research_filter, clinical_filter" YBSU20689 7 38319296 38394857 75562 Loss 1 0.866764 96 795 chas 0 - 43.09 Loss 89.5 Loss #NAME? 112 NA NA NA "ChAS,NXS,PTK" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "75562(31|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" 5 112 - 0 "75562(87|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401278DM female "research_filter, clinical_filter" XNUA56302 18 1905135 1980668 75534 Loss 1 0.925389 76 1007 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 101 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" CUZZ77277 18 1905135 1980668 75534 Loss 1 0.912677 76 1007 chas 99.71 Loss 99.85 Loss 100 Loss LossLossLoss 101 99.72 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" BKFI83925 18 1905135 1980668 75534 Loss 1 0.921614 76 1007 chas 99.98 Loss 99.88 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" XZOF13341 18 1905135 1980668 75534 Loss 1 0.912979 76 1007 chas 99.71 Loss 99.85 Loss 99.85 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" LSSN67820 18 1905135 1980668 75534 Loss 1 0.92811 76 1007 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" SRQH11774 18 1905135 1980668 75534 Loss 1 0.916596 76 1007 chas 99.98 Loss 99.85 Loss 99.85 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401410BJ male "research_filter, clinical_filter" VPFM57168 18 1905135 1980668 75534 Loss 1 0.913264 76 1007 chas 99.98 Loss 99.85 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401696CG male "research_filter, clinical_filter" YQRK14476 18 1905135 1980668 75534 Loss 1 0.917963 76 1007 chas 99.98 Loss 98.4 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" VUFI80076 18 1905135 1980668 75534 Loss 1 0.901486 76 1007 chas 99.98 Loss 99.72 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" QWII30838 18 1905135 1980668 75534 Loss 1 0.915718 76 1007 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402061PI female "research_filter, clinical_filter" NUMT67226 18 1905135 1980668 75534 Loss 1 0.914782 76 1007 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401079HJ female "research_filter, clinical_filter" PCSL59179 18 1905135 1980668 75534 Loss 1 0.936401 76 1007 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401879HJ male "research_filter, clinical_filter" JAVP94180 18 1905135 1980668 75534 Loss 1 0.911832 76 1007 chas 99.98 Loss 85.83 Loss 99.85 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 18p11.32 - - 0 - 0 - - - "75534(9|Jakobsson(2008),Itsara(2009),McKernan(2009),Pinto(2007),McCarroll(2005),Shaikh(2009),Zogopoulos(2007))" 2(1|Pang(2010)) - 101 - 0 "75534(25|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" BRIY29802 12 173787 249262 75476 Gain 3 0.888349 69 1109 chas 55.13 Gain 74.72 Gain 100 Gain GainGainGain 39 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.33 - "IQSEC3,LOC574538" 2 "IQSEC3,LOC574538" 2 - - - "75476(16|Conrad(2009),Jakobsson(2008),Perry(2008),Matsuzaki(2009),Ju(2010),Park(2010))" "462(2|Park(2010),Levy(2007))" 19 39 - 0 "75476(31|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2008),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" QBXB16173 1 108910714 108986168 75455 Loss 1 0.896274 15 5389 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 1p13.3 - - 0 - 0 - - 16006(1|Kidd(2008)) "75455(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 10 - 0 "75455(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 402052ZA male - OPOQ31165 11 89474818 89550211 75394 Loss 1 0.904643 26 3015 chas 0 - 0 - 0 - --- 13 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "75394(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 13 - 0 "75394(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no affy6_no 400795CL female clinical_filter RIQO94770 11 89474818 89550211 75394 Loss 1 0.903149 26 3015 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "75394(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 13 - 0 "75394(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 402062KR female clinical_filter LOAP92341 11 89474818 89550211 75394 Loss 1 0.911754 26 3015 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "75394(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 13 - 0 "75394(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 401554VN male clinical_filter KAYE11117 11 89474818 89550211 75394 Loss 1 0.898667 26 3015 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "75394(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 13 - 0 "75394(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 400686BM male clinical_filter SEZK29585 16 15051528 15126890 75363 Loss 1 0.863296 35 2216 chas 0 - 6.09 Loss 0 - -Loss- 57 NA NA NA "ChAS,NXS" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "72212(5|Kidd(2008),Tuzun(2005))" "75363(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 87 57 - 0 "75363(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401428LD female "research_filter, clinical_filter" NINK42890 9 32158192 32233538 75347 Loss 1 0.916987 48 1603 chas 87.96 Loss 93.88 Loss 93.89 Loss LossLossLoss 64 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - - - - 64 - 0 "10629(3|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" UYMD11362 13 88200037 88275380 75344 Loss 1 0.922457 64 1195 chas 93.79 Loss 96.9 Loss 96.9 Loss LossLossLoss 46 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.2 - "MIR4500,MIR4500HG" 2 MIR4500 1 - - - - - - 46 - 0 "75344(10|Redon(2006),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400030WD female "research_filter, clinical_filter" OUKT23649 14 82481315 82556616 75302 Gain 3 0.915077 40 1930 chas 100 Gain 100 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 14q31.1 - - 0 - 0 - - - "29806(18|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Wang(2008),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008))" 101(1|Matsuzaki(2009)) - 45 - 0 "72945(61|Teague(2010),Ahn(2009),Korbel(2007),Kidd(2010b),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Campbell(2011),Park(2010),Pinto(2011),Conrad(2009))" FALSE TRUE ipn_yes algo_yes NA 400450FG male research_filter KSNB36135 7 108288955 108364253 75299 Gain 3 0.905127 42 1836 chas 81.49 Gain 100 Gain 0 - GainGain- 38 NA NA NA "ChAS,IPN,NXS" 7q31.1 - - 0 - 0 - - - 1079(2|Matsuzaki(2009)) "690(5|Levy(2007),McKernan(2009),Wheeler(2008),Matsuzaki(2009),Bentley(2008))" - 38 - 0 "4012(20|Wilson(2010),McKernan(2009),Levy(2007),Durbin(2010),Bentley(2008))" FALSE TRUE ipn_yes algo_yes NA 401677MM female research_filter TPDE39419 2 13204666 13279945 75280 Gain 3 0.89507 43 1792 chas 19.64 Gain 95.44 Gain 0 - GainGain- 39 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "75280(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 39 - 0 "75280(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401369GR male research_filter JPSN96941 1 249149405 249224684 75280 Gain 3 0.884489 200 378 chas 50.23 Gain 83.81 Gain 94.68 Gain GainGainGain 36 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "ZNF692,PGBD2" 2 "ZNF692,PGBD2" 2 - - - "42102(4|Kidd(2008),Pinto(2007),Conrad(2009))" 1(1|Levy(2007)) 14 36 - 0 "25792(7|Kidd(2008),Kidd(2010b),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" FSRW48279 14 106868273 106943509 75237 Gain 3 0.889229 39 1979 chas 8.64 Gain 21.32 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "75237(61|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 18 67 - 0 "75237(237|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401385BB male research_filter LLRB50237 14 106868273 106943492 75220 Gain 3 0.889818 38 2032 chas 11.55 Gain 29.08 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "75220(61|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 18 67 - 0 "75220(237|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401594MP female research_filter YPPO84595 14 106868273 106943492 75220 Gain 3 0.893042 38 2032 chas 8.64 Gain 39.8 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 14q32.33 - LINC00221 1 LINC00221 1 - - 1174(1|Ahn(2009)) "75220(61|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "3127(7|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 18 67 - 0 "75220(237|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401857VG male research_filter TGEI86896 5 177157387 177232531 75145 Gain 4 0.923927 14 5780 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "75145#1%""Sotos syndrome"":2326144" - "75145(10|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 7 - 0 "75145(32|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401742KB male - NTSS59900 1 248753184 248828223 75040 Loss 1 0.922309 60 1271 chas 56.02 Loss 55.52 Loss 56.11 Loss LossLossLoss 44 76.58 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 75040(1|Kidd(2008)) "75040(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 44 - 0 "75040(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" NFIQ53983 1 248753184 248828223 75040 Loss 0 0.98878 60 1271 chas 56.09 Loss 56.49 Loss 56.49 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 75040(1|Kidd(2008)) "75040(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 44 - 0 "75040(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401719RL female "research_filter, clinical_filter" QMEK60192 1 248753184 248828223 75040 Loss 1 0.902698 60 1271 chas 56.1 Loss 48.6 Loss 56.07 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 75040(1|Kidd(2008)) "75040(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 44 - 0 "75040(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401711WS male "research_filter, clinical_filter" RDPM47345 7 157734760 157809781 75022 Gain 3 0.894792 80 949 chas 44.13 Gain 44.37 Gain 0 - GainGain- 64 91.91 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 7q36.3 - PTPRN2 1 - 0 - - - "75022(4|Itsara(2009),Pinto(2007),Simon-Sanchez(2007))" "804(8|Conrad(2009),Levy(2007),Matsuzaki(2009))" - 64 - 0 "75022(50|Teague(2010),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wilson(2010),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400554WB male "research_filter, clinical_filter" WCXF39029 Y 26517404 26592389 74986 Loss 0 0.905793 36 2142 chas 0 - 0 - 0 - --- 3 0 - - ChAS Yq11.23 - - 0 - 0 - "74986#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "74986(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 3 - 0 "74986(4|McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_no algo_no NA 400788PV male clinical_filter DLXG88049 13 64312744 64387677 74934 Gain 3 0.895148 52 1469 chas 75.34 Gain 96.52 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 18270(1|Kidd(2008)) "74934(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 85 43 - 0 "74934(11|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" RGHO54100 13 64312744 64387677 74934 Gain 3 0.891589 52 1469 chas 67.41 Gain 76.8 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 13q21.31 - OR7E156P 1 OR7E156P 1 - - 18270(1|Kidd(2008)) "74934(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" 102(1|Bentley(2008)) 85 43 - 0 "74934(11|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" VQFC85923 16 7889987 7964881 74895 Gain 3 0.889555 56 1361 chas 72.14 Gain 80.03 Gain 0 - GainGain- 85 NA NA NA "ChAS,IPN,NXS" "16p13.2,16p13.3" - - 0 - 0 - - - "49827(2|Wang(2007),Redon(2006))" "911(2|Levy(2007),McKernan(2009))" - 85 - 0 "49827(8|Wang(2007),Wilson(2010),McKernan(2009),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" LLZZ76842 1 248753333 248828223 74891 Loss 1 0.895077 58 1313 chas 54.92 Loss 55.98 Loss 55.98 Loss LossLossLoss 43 58.59 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 74891(1|Kidd(2008)) "74891(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 43 - 0 "74891(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400354TJ female "research_filter, clinical_filter" TTBC76525 1 248753333 248828223 74891 Loss 1 0.898683 58 1313 chas 54.92 Loss 54.89 Loss 55.98 Loss LossLossLoss 43 58.59 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 74891(1|Kidd(2008)) "74891(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 43 - 0 "74891(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400371GA female "research_filter, clinical_filter" KZTP77176 1 248753333 248828223 74891 Loss 0 0.985585 58 1313 chas 56.02 Loss 56.41 Loss 54.88 Loss LossLossLoss 43 81.12 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 74891(1|Kidd(2008)) "74891(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 43 - 0 "74891(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" DLXG88049 1 248753333 248828223 74891 Loss 1 0.917987 58 1313 chas 55.95 Loss 54.89 Loss 55.43 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 74891(1|Kidd(2008)) "74891(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 43 - 0 "74891(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" XCWR96625 1 248753333 248828223 74891 Loss 1 0.88987 58 1313 chas 56.02 Loss 45.69 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 1q44 - "OR2T10,OR2T11,OR2T27,OR2T35" 4 "OR2T10,OR2T11,OR2T27,OR2T35" 4 - - 74891(1|Kidd(2008)) "74891(27|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Young(2008),Pinto(2007),Park(2010),Wheeler(2008),McCarroll(2008))" "2519(7|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" 44 43 - 0 "74891(59|Sebat(2004),Young(2008),Redon(2006),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Conrad(2006),Park(2010),Kidd(2008),Altshuler(2010),Ju(2010),Durbin(2010),Perry(2008b),Locke(2006),Wheeler(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 400158FB male "research_filter, clinical_filter" OBHQ36250 7 38295932 38370792 74861 Loss 1 0.865371 82 924 chas 0 - 57.06 Loss 85.18 Loss #NAME? 108 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "74861(21|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1605(2|McKernan(2009),Shaikh(2009))" 30 108 - 0 "74861(55|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401011PJ female "research_filter, clinical_filter" DMKI43381 7 6779270 6854082 74813 Loss 1 0.890405 18 4400 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 7p22.1 - "CCZ1B,PMS2CL,RSPH10B,RSPH10B2" 4 "CCZ1B,PMS2CL,RSPH10B,RSPH10B2" 4 - - "74813(2|Feuk(2005),Kidd(2008))" "74813(5|de Smith(2007),Pinto(2007),Redon(2006),Matsuzaki(2009),Perry(2008))" - 100 10 - 0 "74813(7|Redon(2006),Perry(2008),Durbin(2010),Kidd(2008),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400763BT female - QUIW42968 16 2663367 2738166 74800 Gain 3 0.901591 34 2266 chas 20.28 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 16p13.3 - "KCTD5,FLJ42627,ERVK13-1,LOC652276" 4 "KCTD5,FLJ42627,ERVK13-1,LOC652276" 4 - - - "74800(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 100 18 - 0 "74800(58|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400926LJ female research_filter XZZR64566 13 62423687 62498458 74772 Gain 4 0.947895 54 1410 chas 100 Gain 100 Gain 99.86 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.31 - - 0 - 0 - - - - - - 40 - 0 "74772(8|Pinto(2011),Teague(2010),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400996MC male "research_filter, clinical_filter" XBAT84080 5 97051318 97125988 74671 Loss 1 0.912288 44 1736 chas 56.8 Loss 99.98 Loss 0 - LossLoss- 50 69.17 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5q15 - - 0 - 0 - - - "74671(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 783(1|Bentley(2008)) - 50 - 0 "74671(72|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400186WC female "research_filter, clinical_filter" OCVA11195 1 80539340 80613801 74462 Loss 1 0.901263 79 954 chas 100 Loss 96.65 Loss 96.59 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "74462(2|Gusev(2009),Pinto(2007))" "2(2|Pang(2010),Levy(2007))" - 57 - 0 "74462(10|Itsara(2009),Gusev(2009),Shaikh(2009),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401358VP male "research_filter, clinical_filter" AEUU95723 16 74392007 74466419 74413 Loss 1 0.906058 18 4377 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "74413(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 12 - 0 "74413(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 402073LQ male - KGUZ66103 16 74392007 74466419 74413 Loss 1 0.888647 18 4377 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "74413(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 94 12 - 0 "74413(91|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401596PJ male - IDKP47812 8 15326586 15400911 74326 Loss 1 0.929123 56 1351 chas 92.66 Loss 96.14 Loss 99.81 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 8p22 - TUSC3 1 TUSC3 1 TUSC3 - - "74326(8|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),McKernan(2009),Kidd(2008),Pinto(2007),McCarroll(2005))" "292(2|Levy(2007),Bentley(2008))" - 52 TUSC3#id_known 1 "74326(34|Wang(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Pinto(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401377MA male "research_filter, clinical_filter" JDGZ96096 11 55386384 55460670 74287 Gain 3 0.875375 86 873 chas 0 - 52.73 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "73243(2|Kidd(2008),Korbel(2007))" "74287(74|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "74287(747|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401482CB male "research_filter, clinical_filter" ZZDG28391 1 106012741 106086980 74240 Gain 3 0.886312 64 1178 chas 40.69 Gain 44.62 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 1p21.1 - - 0 - 0 - - - "74240(26|Sebat(2004),Ahn(2009),McKernan(2009),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009),McCarroll(2008))" "2106(8|Conrad(2005),Matsuzaki(2009))" - 67 - 0 "74240(143|Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" YKER13969 1 106012741 106086980 74240 Gain 3 0.89672 64 1178 chas 91.42 Gain 95.3 Gain 0 - GainGain- 67 NA NA NA "ChAS,IPN,NXS" 1p21.1 - - 0 - 0 - - - "74240(26|Sebat(2004),Ahn(2009),McKernan(2009),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Wang(2008),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Wheeler(2008),Kim(2009),Shaikh(2009),McCarroll(2008))" "2106(8|Conrad(2005),Matsuzaki(2009))" - 67 - 0 "74240(143|Sebat(2004),Wang(2008),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401372RR male "research_filter, clinical_filter" FPHR45460 1 73012023 73086201 74179 Loss 1 0.911895 52 1454 chas 99.98 Loss 97.62 Loss 100 Loss LossLossLoss 47 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "74023(3|Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 47 - 0 "74179(7|Wong(2007),Durbin(2010),Simon-Sanchez(2007),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" AEUU95723 8 361499 435580 74082 Gain 3 0.895097 176 423 chas 63.5 Gain 87.78 Gain 91.21 Gain GainGainGain 56 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - FBXO25 1 FBXO25 1 - - - "57822(5|Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),Perry(2008))" - 52 56 - 0 "74082(18|Conrad(2009),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Alkan(2009),Pinto(2007),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402073LQ male "research_filter, clinical_filter" EIKI77114 12 11493836 11567911 74076 Loss 1 0.899302 41 1851 chas 95.4 Loss 95.47 Loss 97.51 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "74076(40|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009),Mills(2006))" 1(1|Levy(2007)) 81 70 - 0 "74076(167|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Mills(2006),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" YPPO84595 2 34185934 34259842 73909 Gain 3 0.903184 44 1718 chas 85.58 Gain 100 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 2p22.3 - - 0 - 0 - - - "2336(2|McKernan(2009),Jakobsson(2008))" 1(1|Levy(2007)) - 45 - 0 "15747(7|McKernan(2009),Jakobsson(2008),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401857VG male research_filter JFDL89779 17 43586084 43659985 73902 Loss 1 0.879368 26 2956 chas 0 - 0 - 0 - --- 23 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "27520#1%""17q21.3 recurrent microdeletion syndrome"":577740" "73902(2|Stefansson(2005),Kidd(2008))" "73902(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 23 - 0 "73902(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no NA 401526WB male clinical_filter GVAB34760 6 257340 331140 73801 Loss 1 0.876082 116 641 chas 51.45 Loss 5.2 Loss 0 - LossLoss- 47 NA NA NA "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "73801(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 47 - 0 "73801(53|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" TPDE39419 6 257340 331140 73801 Gain 3 0.883599 116 641 chas 0 - 15.78 Gain 0 - -Gain- 47 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "73801(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 47 - 0 "73801(53|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),Mills(2006),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401369GR male "research_filter, clinical_filter" QMEK60192 1 110178181 110251952 73772 Loss 1 0.905434 22 3512 chas 7.9 Loss 9.7 Loss 9.7 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 1p13.3 - "GSTM1,GSTM2,GSTM4" 3 "GSTM1,GSTM2,GSTM4" 3 - - - "73772(50|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),McKernan(2009),Kim(2009),Mills(2006))" 703(1|Park(2010)) 49 69 - 0 "73772(186|Teague(2010),Korbel(2007),Ju(2010),Campbell(2011),Pang(2010),Pinto(2011),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Perry(2008),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401711WS male research_filter YBMF74034 19 53928751 54002497 73747 Loss 1 0.909403 96 776 chas 79.93 Loss 80.74 Loss 100 Loss LossLossLoss 71 98.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19q13.42 - "ZNF813,LOC147804,ZNF761" 3 "ZNF813,LOC147804,ZNF761" 3 - - - "73747(7|Wang(2007),Ahn(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Redon(2006))" - 83 71 - 0 "73747(34|Wang(2007),Ahn(2009),Korbel(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" WDRZ91881 17 44214722 44288442 73721 Loss 1 0.861424 64 1170 chas 46.16 Loss 0 - 0 - Loss-- 68 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 73721(1|Kidd(2008)) "73721(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" 9 68 - 0 "73721(231|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401426WD male "research_filter, clinical_filter" OBHQ36250 1 110178181 110251835 73655 Loss 1 0.880386 20 3876 chas 99.93 Loss 0 - 0 - Loss-- 67 NA NA NA "ChAS,IPN" 1p13.3 - "GSTM1,GSTM2,GSTM4" 3 "GSTM1,GSTM2,GSTM4" 3 - - - "73655(50|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),McKernan(2009),Kim(2009),Mills(2006))" 703(1|Park(2010)) 49 67 - 0 "73655(186|Teague(2010),Korbel(2007),Ju(2010),Campbell(2011),Pang(2010),Pinto(2011),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Mills(2006),Conrad(2009),McKernan(2009),Tuzun(2005),Perry(2008),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401011PJ female research_filter KLXQ40405 17 43586368 43659985 73618 Gain 3 0.909654 24 3200 chas 0 - 0 - 0 - --- 22 0 - - ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "27520#1%""17q21.3 recurrent microdeletion syndrome"":577740" "73618(2|Stefansson(2005),Kidd(2008))" "73618(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 22 - 0 "73618(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400051MR_1 male - YCLA52151 6 31384080 31457633 73554 Loss 1 0.909998 110 674 chas 91.52 Loss 94.59 Loss 99.05 Loss LossLossLoss 93 91.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p21.33 - "HCP5,HCG26" 2 "HCP5,HCG26" 2 - - - "73554(56|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "73554(16|Wang(2008),Levy(2007),Matsuzaki(2009))" 8 93 - 0 "73554(158|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400173KP female "research_filter, clinical_filter" MAAD53838 6 31384080 31457633 73554 Gain 3 0.902271 110 674 chas 95.26 Gain 89.4 Gain 94.59 Gain GainGainGain 93 NA NA NA "ChAS,IPN,NXS,PTK" 6p21.33 - "HCP5,HCG26" 2 "HCP5,HCG26" 2 - - - "73554(56|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "73554(16|Wang(2008),Levy(2007),Matsuzaki(2009))" 8 93 - 0 "73554(158|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401517PR male "research_filter, clinical_filter" XWKR95070 10 105150562 105224106 73545 Gain 3 0.889721 76 980 chas 76.26 Gain 50.01 Gain 0 - GainGain- 43 77.64 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 10q24.33 - "MIR1307,PDCD11,USMG5,CALHM1,CALHM2" 5 "MIR1307,PDCD11,USMG5,CALHM1,CALHM2" 5 - - - 3825(1|Conrad(2005)) - - 43 - 0 "60581(4|Kidd(2008),Conrad(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400855BD female "research_filter, clinical_filter" IAET85141 X 62432151 62505594 73444 Gain 2 0.93602 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 98.11 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401136LB male research_filter JITM64437 X 62432151 62505594 73444 Gain 2 0.946693 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 98.11 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400661AD male research_filter LNYN65073 X 62432151 62505594 73444 Gain 2 0.962013 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 98.11 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401924ST male research_filter ELXG87337 X 62432151 62505594 73444 Gain 2 0.954299 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 98.11 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401634CH male research_filter TOTG24684 X 62432151 62505594 73444 Gain 2 0.951547 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 86.92 Gain "BS,GTC" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401764JJ male research_filter ZVRQ32621 X 62432151 62505594 73444 Gain 2 0.930977 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 94.9 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401176BD male research_filter HBRB11217 X 62432151 62505594 73444 Gain 2 0.960889 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 94.9 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400302HW male research_filter TJGR62389 X 62432151 62505594 73444 Gain 2 0.939829 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 100 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400207HN male research_filter HOIC14625 X 62432151 62505594 73444 Gain 2 0.924974 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 94.9 Gain "BS,GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400619MP male research_filter EZDG77492 X 62432151 62505594 73444 Gain 2 0.914392 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 98.11 Gain "GTC,IP6" "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400308SP male research_filter OVRI44012 X 62432151 62505594 73444 Gain 2 0.932634 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400083TG male research_filter XUMQ23395 X 62432151 62505594 73444 Gain 2 0.963342 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401875FG male research_filter KWYE93203 X 62432151 62505594 73444 Gain 2 0.926023 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401357MH male research_filter WQLF68770 X 62432151 62505594 73444 Gain 2 0.963852 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401437MJ male research_filter OWWR99794 X 62432151 62505594 73444 Gain 2 0.904782 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401497PR male research_filter LNDH30137 X 62432151 62505594 73444 Gain 2 0.934978 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401808PS male research_filter EGVC41637 X 62432151 62505594 73444 Gain 2 0.915978 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401939GD male research_filter RCXD61683 X 62432151 62505594 73444 Gain 2 0.931628 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401465TB male research_filter RFXX95002 X 62432151 62505594 73444 Gain 2 0.911803 18 4320 chas 47.45 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xq11.1 - - 0 - 0 - - - "73444(3|de Smith(2007),Conrad(2009),McCarroll(2008))" - 53 27 - 0 "73444(10|Conrad(2009),Redon(2006),Levy(2007),Durbin(2010),McCarroll(2008),Campbell(2011),Locke(2006),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401773AM male research_filter GQSZ37539 11 55374019 55447452 73434 Loss 1 0.862189 92 806 chas 99.98 Loss 0 - 0 - Loss-- 59 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72390(2|Kidd(2008),Korbel(2007))" "73434(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "73434(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" OLST13930 11 55374019 55447452 73434 Loss 1 0.8556 92 806 chas 99.98 Loss 0 - 0 - Loss-- 59 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72390(2|Kidd(2008),Korbel(2007))" "73434(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "73434(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400007RG female "research_filter, clinical_filter" MGJJ89085 11 55374019 55447452 73434 Gain 3 0.890521 92 806 chas 0 - 83.76 Gain 0 - -Gain- 59 72.05 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72390(2|Kidd(2008),Korbel(2007))" "73434(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "73434(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400615RI female "research_filter, clinical_filter" BDQN41691 11 55374019 55447452 73434 Gain 3 0.872456 92 806 chas 0 - 94.3 Gain 0 - -Gain- 59 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72390(2|Kidd(2008),Korbel(2007))" "73434(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 59 - 0 "73434(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401602PR male "research_filter, clinical_filter" FCXX78522 10 51830347 51903756 73410 Loss 1 0.923845 20 3863 chas 0 - 0 - 91.95 Loss #NAME? 7 0 - - "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_no 401117GM male research_filter SRJV59260 10 51830347 51903756 73410 Loss 1 0.891116 20 3863 chas 0 - 0 - 100 Loss #NAME? 7 0 - - "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_no 400737GC female research_filter QKSF16477 10 51830347 51903756 73410 Loss 1 0.917481 20 3863 chas 0 - 0 - 91.95 Loss #NAME? 7 NA NA NA "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401749DJ male research_filter LOAP92341 10 51830347 51903756 73410 Loss 1 0.891877 20 3863 chas 0 - 0 - 91.95 Loss #NAME? 7 NA NA NA "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401554VN male research_filter UCFR59681 10 51830347 51903756 73410 Loss 1 0.901838 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400319HT male - AGIM53957 10 51830347 51903756 73410 Loss 1 0.887228 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400564SN female - TOTG24684 10 51830347 51903756 73410 Loss 1 0.904151 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401764JJ male - RBBO63662 10 51830347 51903756 73410 Loss 1 0.893524 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401105WS male - BGWX92658 10 51830347 51903756 73410 Loss 1 0.898139 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401566DD male - PTWY73614 10 51830347 51903756 73410 Loss 1 0.886792 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401540GM male - LDEW86321 10 51830347 51903756 73410 Loss 1 0.887136 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401786WD male - GEZQ95890 10 51830347 51903756 73410 Loss 1 0.892448 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 401487FW male - JSIF57066 10 51830347 51903756 73410 Loss 1 0.897689 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400512LR female - HBRB11217 10 51830347 51903756 73410 Loss 1 0.890662 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400302HW male - KEHV72339 10 51830347 51903756 73410 Loss 1 0.905927 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400733SW male - UYAI76550 10 51830347 51903756 73410 Loss 1 0.883343 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400792RE female - WSYP96126 10 51830347 51903756 73410 Loss 1 0.884407 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400660GK male - VUCC31552 10 51830347 51903756 73410 Loss 1 0.89606 20 3863 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400109LJ male - OVRI44012 10 51830347 51903756 73410 Loss 1 0.899488 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400083TG male - ORXL21407 10 51830347 51903756 73410 Loss 1 0.884481 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402064DC male - WMCV84375 10 51830347 51903756 73410 Loss 1 0.913253 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401249TP female - TDHB82208 10 51830347 51903756 73410 Loss 1 0.891181 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400923OA female - ZHGO36222 10 51830347 51903756 73410 Loss 1 0.884199 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401135CS female - QVQY90814 10 51830347 51903756 73410 Loss 1 0.89256 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401311GL female - OOSY20649 10 51830347 51903756 73410 Loss 1 0.884836 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401817MC female - NINK42890 10 51830347 51903756 73410 Loss 1 0.887161 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401611CD male - PRED73338 10 51830347 51903756 73410 Loss 1 0.895117 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401183HP female - IDKP47812 10 51830347 51903756 73410 Loss 1 0.906076 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401377MA male - XNQF62194 10 51830347 51903756 73410 Loss 1 0.901892 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401690HA male - QMEK60192 10 51830347 51903756 73410 Loss 1 0.895853 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401711WS male - FGIX67905 10 51830347 51903756 73410 Loss 1 0.889182 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401391PJ male - PTGD86385 10 51830347 51903756 73410 Loss 1 0.9088 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401262RR male - WYNE83745 10 51830347 51903756 73410 Loss 1 0.903667 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401844ZD male - DUXB26784 10 51830347 51903756 73410 Loss 1 0.880167 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401519SA female - UCQK65306 10 51830347 51903756 73410 Loss 1 0.906853 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401196CR male - TGGX58243 10 51830347 51903756 73410 Loss 1 0.883629 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400942HR male - YZPM76095 10 51830347 51903756 73410 Loss 1 0.887061 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401841OB male - YPPO84595 10 51830347 51903756 73410 Loss 1 0.889168 20 3863 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73410(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73410(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401857VG male - QMSH77829 10 51830348 51903756 73409 Loss 1 0.891897 19 4078 chas 0 - 0 - 0 - --- 7 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73409(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "73409(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400038CK male - SFLX52247 10 51830366 51903756 73391 Loss 1 0.88876 18 4317 chas 0 - 0 - 91.94 Loss #NAME? 7 NA NA NA "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73391(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "73391(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401640WJ male research_filter UDNO19569 10 51830366 51903756 73391 Loss 1 0.895721 18 4317 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "73391(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "73391(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401766MR male - BSJX70163 18 37754359 37827683 73325 Gain 3 0.898479 40 1880 chas 80.59 Gain 100 Gain 0 - GainGain- 37 NA NA NA "ChAS,IPN,NXS" 18q12.3 - - 0 - 0 - - - - - - 37 - 0 "11421(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401406KF male research_filter THNQ55263 19 54722728 54796029 73302 Gain 3 0.877211 45 1665 chas 15.06 Gain 27.69 Gain 0 - GainGain- 37 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "LILRA6,MIR4752,LILRB5,LILRB3,LILRB2" 5 "LILRA6,MIR4752,LILRB5,LILRB3,LILRB2" 5 - - - "73302(54|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Tuzun(2005),Itsara(2009),Ju(2010),Shaikh(2009))" - 41 37 - 0 "73302(278|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Ju(2010),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400960TN female research_filter WTDT99871 20 29436789 29510072 73284 Loss 1 0.89503 24 3186 chas 16.6 Loss 0 - 0 - Loss-- 24 NA NA NA "ChAS,IPN" 20q11.21 - - 0 - 0 - - - "73284(15|Conrad(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008),Wheeler(2008))" - 100 24 - 0 "73284(23|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Korbel(2007))" FALSE TRUE ipn_yes algo_yes NA 401505WI male research_filter JPEZ22320 11 55374176 55447452 73277 Loss 1 0.864501 88 842 chas 100 Loss 0 - 0 - Loss-- 57 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72233(2|Kidd(2008),Korbel(2007))" "73277(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 57 - 0 "73277(752|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401149VA male "research_filter, clinical_filter" WMCV84375 11 55374019 55447224 73206 Gain 3 0.877424 90 822 chas 0 - 94.59 Gain 0 - -Gain- 57 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "72162(2|Kidd(2008),Korbel(2007))" "73206(68|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 57 - 0 "73206(750|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401249TP female "research_filter, clinical_filter" RKMW41925 1 9326599 9399793 73195 Gain 3 0.906014 79 938 chas 62.94 Gain 61.55 Gain 0 - GainGain- 55 99.94 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "73195(6|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 55 - 0 "73195(14|Itsara(2009),Wong(2007),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400323AA female "research_filter, clinical_filter" WQLF68770 1 113383378 113456547 73170 Gain 3 0.913056 33 2286 chas 37.2 Gain 74.57 Gain 0 - GainGain- 38 NA NA NA "ChAS,IPN,NXS" 1p13.2 - SLC16A1 1 SLC16A1 1 SLC16A1 - - "73170(3|Wang(2007),Redon(2006),Conrad(2009))" 1(1|Levy(2007)) - 38 - 0 "73170(10|Wang(2007),Iafrate(2004),Shaikh(2009),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_yes algo_yes NA 401437MJ male research_filter XQAG43010 3 173630667 173703831 73165 Gain 3 0.904004 96 770 chas 99.98 Gain 99.71 Gain 100 Gain GainGainGain 58 NA NA NA "ChAS,IPN,NXS,PTK" 3q26.31 - NLGN1 1 - 0 - - - 73165(1|Shaikh(2009)) - - 58 NLGN1#asd_candidate 1 "73165(4|Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" ILTL12466 15 102151469 102224601 73133 Loss 1 0.908955 252 291 chas 84.06 Loss 91.58 Loss 91.57 Loss LossLossLoss 47 86.39 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - "TM2D3,TARSL2" 2 "TM2D3,TARSL2" 2 - "73133#1%""15q26 overgrowth syndrome"":3163423" - "73133(4|Pang(2010),Park(2010),Pinto(2007),Zogopoulos(2007))" 831(1|Conrad(2009)) - 47 - 0 "73133(10|Conrad(2009),Itsara(2009),Iafrate(2004),Durbin(2010),Pang(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" JSIF57066 16 15053775 15126890 73116 Loss 1 0.885341 22 3481 chas 0 - 0 - 0 - --- 53 0 - - ChAS 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69965(5|Kidd(2008),Tuzun(2005))" "73116(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 52 - 0 "73116(135|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no affy6_no 400512LR female - QBXB16173 7 119565056 119638101 73046 Loss 1 0.895846 52 1432 chas 86.16 Loss 93.02 Loss 93.02 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.31 - - 0 - 0 - - - "64712(4|Matsuzaki(2009),Shaikh(2009))" - - 42 - 0 "73046(9|Kidd(2008),Wong(2007),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" ZKCL87954 16 15053869 15126890 73022 Loss 1 0.891229 18 4295 chas 0 - 0 - 0 - --- 48 NA NA NA ChAS 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69871(5|Kidd(2008),Tuzun(2005))" "73022(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 48 - 0 "73022(134|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_no NA 401698SB male - KWJN47187 1 113383378 113456368 72991 Gain 3 0.899927 32 2354 chas 36.53 Gain 47.73 Gain 0 - GainGain- 37 37.29 - BS "ChAS,IPN,NXS" 1p13.2 - SLC16A1 1 SLC16A1 1 SLC16A1 - - "72991(3|Wang(2007),Redon(2006),Conrad(2009))" 1(1|Levy(2007)) - 37 - 0 "72991(10|Wang(2007),Iafrate(2004),Shaikh(2009),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 400821FE female research_filter XNUA56302 6 78962293 79035172 72880 Loss 0 0.958549 27 2803 chas 90.65 Loss 95.11 Loss 84.45 Loss LossLossLoss 119 90.72 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "72880(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 118 - 0 "72880(822|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" ELGU40718 6 78962293 79035172 72880 Loss 0 0.965511 27 2803 chas 90.65 Loss 95.11 Loss 84.45 Loss LossLossLoss 119 90.72 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "72880(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 118 - 0 "72880(822|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401259LS female "research_filter, clinical_filter" VUFI80076 4 38464493 38537205 72713 Loss 1 0.913599 49 1514 chas 100 Loss 97.77 Loss 100 Loss LossLossLoss 51 NA NA NA "ChAS,IPN,NXS,PTK" 4p14 - - 0 - 0 - - - 72713(2|Shaikh(2009)) - - 51 - 0 "72713(6|Kidd(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" ZJYL67451 22 49258319 49331012 72694 Gain 3 0.901759 48 1546 chas 85.44 Gain 97.45 Gain 0 - GainGain- 47 86.78 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 22q13.32 - LOC100128946 1 LOC100128946 1 - - - - "312(3|Pang(2010),Levy(2007),Bentley(2008))" 6 47 - 0 "44080(15|Wong(2007),Jakobsson(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401025SM male research_filter GDLU88739 22 49258319 49331012 72694 Gain 3 0.894502 48 1546 chas 73.03 Gain 94.57 Gain 0 - GainGain- 47 NA NA NA "ChAS,IPN,NXS" 22q13.32 - LOC100128946 1 LOC100128946 1 - - - - "312(3|Pang(2010),Levy(2007),Bentley(2008))" 6 47 - 0 "44080(15|Wong(2007),Jakobsson(2008),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010))" FALSE TRUE ipn_yes algo_yes NA 400268SY female research_filter FUTH67903 10 47062985 47135671 72687 Loss 1 0.854909 100 734 chas 0 - 0 - 0 - --- 77 NA NA NA ChAS 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - 288(1|Tuzun(2005)) "72687(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 1 77 - 0 "72687(201|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_no NA 401874DJ male clinical_filter SNEF27582 6 78969092 79041760 72669 Loss 0 0.965321 27 2794 chas 90.93 Loss 95.4 Loss 89.14 Loss LossLossLoss 117 96.52 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "72669(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 117 - 0 "72669(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401831TW male "research_filter, clinical_filter" AIKT30285 6 78969092 79041720 72629 Gain 3 0.89094 26 2905 chas 90.98 Gain 0 - 0 - Gain-- 117 0 - - "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "72629(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 117 - 0 "72629(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400618GC male research_filter KLEB18411 6 78969092 79041720 72629 Gain 3 0.883506 26 2905 chas 0 - 0 - 0 - --- 117 0 - - ChAS 6q14.1 - - 0 - 0 - - - "72629(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 117 - 0 "72629(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_no 400300SD female - TDDJ68763 6 78969092 79041720 72629 Gain 3 0.88182 26 2905 chas 0 - 0 - 0 - --- 117 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "72629(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 117 - 0 "72629(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401250WD female - FOMC40154 15 102356497 102429112 72616 Gain 3 0.894758 149 490 chas 96.04 Gain 97.14 Gain 100 Gain GainGainGain 38 98.58 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q26.3 - "OR4F15,GPCRLTM7" 2 "OR4F15,GPCRLTM7" 2 - "72616#1%""15q26 overgrowth syndrome"":3163423" - "72616(11|Conrad(2009),Perry(2008),Matsuzaki(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 38 38 - 0 "72616(18|Conrad(2009),Redon(2006),Perry(2008),Alkan(2009),Durbin(2010),Wilson(2010),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" SAHS24305 4 136529470 136602051 72582 Loss 1 0.894631 41 1814 chas 100 Loss 98.91 Loss 98.9 Loss LossLossLoss 38 NA NA NA "ChAS,IPN,NXS,PTK" 4q28.3 - - 0 - 0 - - - - - - 38 - 0 "58277(7|McKernan(2009),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" LHRU87236 16 15054346 15126890 72545 Loss 1 0.952099 8 10363 chas 0 - 33.52 "Gain,Loss" 74.81 Loss #NAME? 44 85.33 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69394(5|Kidd(2008),Tuzun(2005))" "72545(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 44 - 0 "72545(133|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 401038LN female research_filter SRJV59260 16 15054346 15126890 72545 Loss 1 0.941051 8 10363 chas 0 - 7.44 "Gain,Loss" 7.44 Loss #NAME? 44 43.18 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69394(5|Kidd(2008),Tuzun(2005))" "72545(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 44 - 0 "72545(133|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400737GC female research_filter GNXG93257 16 15054346 15126890 72545 Loss 1 0.937985 8 10363 chas 0 - 39.32 "Gain,Loss" 55.54 Loss #NAME? 44 100 Loss "GTC,IP6" "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69394(5|Kidd(2008),Tuzun(2005))" "72545(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 44 - 0 "72545(133|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400108BJ female research_filter WFIZ12719 16 15054346 15126890 72545 Loss 1 0.948744 8 10363 chas 0 - 32.51 Loss 55.01 Loss #NAME? 44 35.97 Loss GTC "ChAS,NXS,PTK" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69394(5|Kidd(2008),Tuzun(2005))" "72545(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 44 - 0 "72545(133|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400793BR male research_filter ISXJ62958 16 15054346 15126890 72545 Loss 1 0.929046 8 10363 chas 0 - 7.12 "Gain,Loss" 0 - "-Gain,Loss-" 44 43.18 Loss GTC "ChAS,NXS" 16p13.11 - PDXDC1 1 PDXDC1 1 - - "69394(5|Kidd(2008),Tuzun(2005))" "72545(19|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Pang(2010),Itsara(2009),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" - 90 44 - 0 "72545(133|Teague(2010),Redon(2006),Ju(2010),Tuzun(2005),Pang(2010),Pinto(2011),Kidd(2008),Kim(2009),De(Smith_2007),Conrad(2009),Alkan(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Perry(2008),Itsara(2009),Schuster(2010),Durbin(2010),Kidd(2010b),McCarroll(2008),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 401956DQ male research_filter BNID76344 5 104425567 104498041 72475 Loss 1 0.938932 64 1150 chas 89.16 Loss 97.68 Loss 97.69 Loss LossLossLoss 48 95.4 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "72475(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 47 - 0 "72475(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" BKFI83925 7 142427234 142499697 72464 Gain 3 0.899059 108 677 chas 15.45 Gain 56.88 Gain 81.83 Gain GainGainGain 74 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PRSS1,TRY6,PRSS2" 3 "PRSS1,TRY6,PRSS2" 3 "PRSS1,PRSS2" - - "72464(15|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" - 55 74 - 0 "72464(53|Wang(2007),Wong(2007),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" EHXC97365 X 134807573 134880026 72454 Gain 3 0.96288 224 324 chas 93.04 Gain 0 - 0 - Gain-- 44 NA NA NA "ChAS,IPN" Xq26.3 - "CT45A1,CT45A2,CT45A4" 3 "CT45A1,CT45A2,CT45A4" 3 - - 17978(1|Kidd(2008)) "72454(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" 296(1|Perry(2008)) 76 44 - 0 "72454(34|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" FDPK98295 8 92113372 92185735 72364 Loss 1 0.907799 76 964 chas 85.48 Loss 76.88 Loss 95.61 Loss LossLossLoss 42 89.61 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q21.3 - LRRC69 1 LRRC69 1 - - 554(1|Ahn(2009)) "58273(3|McKernan(2009),Pinto(2007),Redon(2006))" "341(4|Pang(2010),Wheeler(2008),Bentley(2008))" 2 42 - 0 "72364(23|Ahn(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" FCXX78522 1 147947839 148020200 72362 Loss 1 0.888054 20 3808 chas 0 - 0 - 0 - --- 0 0 - - ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "72362(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "72362(92|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401117GM male - AYKK27829 6 78969403 79041720 72318 Loss 1 0.868613 25 3013 chas 90.96 Loss 0 - 0 - Loss-- 116 90.96 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "72318(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 116 - 0 "72318(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400383HL female "research_filter, clinical_filter" BXCR78538 6 78969403 79041720 72318 Loss 1 0.87621 25 3013 chas 90.96 Loss 0 - 0 - Loss-- 116 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "72318(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 116 - 0 "72318(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401050GS female "research_filter, clinical_filter" EDMQ40540 1 147947839 148020154 72316 Loss 1 0.877273 18 4253 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "72316(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "72316(92|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401589HP male - SRJV59260 17 64409779 64482038 72260 Loss 1 0.918703 140 519 chas 100 Loss 99.31 Loss 99.3 Loss LossLossLoss 68 98.61 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q24.2 - PRKCA 1 - 0 PRKCA - - - 786(1|Conrad(2009)) - 68 - 0 "72260(8|Itsara(2009),Conrad(2009),Wong(2007),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" RFXX95002 14 22858572 22930787 72216 Loss 1 0.855645 55 1337 chas 0 - 0 - 0 - --- 43 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "72216(19|Sebat(2004),Ahn(2009),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Pang(2010),Kidd(2008),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "719(10|Conrad(2009),Matsuzaki(2009),Ju(2010),Wang(2008),Bentley(2008),Pang(2010),Park(2010),Mills(2006))" - 43 - 0 "72216(87|Sebat(2004),Ahn(2009),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Wilson(2010),Kidd(2010b),Itsara(2009),Park(2010),Wheeler(2008),Kim(2009),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401773AM male clinical_filter YBGD61325 10 35377475 35449681 72207 Gain 4 0.941148 78 937 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 36 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p11.21 - "CREM,CUL2" 2 "CREM,CUL2" 2 - - - - - - 36 - 0 64024(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 400543CK male "research_filter, clinical_filter" STES59258 22 49839613 49911808 72196 Loss 1 0.923805 36 2062 chas 81.58 Loss 88.57 Loss 88.56 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.33 - - 0 - 0 - - - "60637(2|Itsara(2009),Shaikh(2009))" "1351(5|Wang(2008),Conrad(2009),Bentley(2008),Pang(2010),Mills(2006))" - 46 - 0 "66809(30|Teague(2010),Jakobsson(2008),Conrad(2009),Itsara(2009),Wang(2008),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" TJGR62389 2 131438513 131510680 72168 Gain 3 0.907255 62 1183 chas 41.46 Gain 43.46 Gain 0 - GainGain- 18 39.31 Gain "BS,IP6" "ChAS,IPN,NXS" 2q21.1 - "GPR148,CYP4F30P" 2 "GPR148,CYP4F30P" 2 - - - "46123(3|Conrad(2009),Redon(2006),Perry(2008))" - 54 18 - 0 "72168(9|Conrad(2009),Redon(2006),Perry(2008),Durbin(2010),Kidd(2008),Perry(2008b),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" SXNO44692 X 72022843 72095008 72166 Loss 0 0.977411 8 10309 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xq13.2 - "DMRTC1B,DMRTC1" 2 "DMRTC1B,DMRTC1" 2 - - 72166(2|Kidd(2008)) "5708(2|Conrad(2009),Matsuzaki(2009))" - 100 3 - 0 "72166(4|Kidd(2008),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401949MN male - DCUN59806 X 89752140 89824303 72164 Loss 1 0.855112 24 3137 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - - - 100 19 - 0 72164(1|Redon(2006)) FALSE TRUE ipn_no algo_no NA 400316SL female - PUOR77387 X 89752140 89824303 72164 Loss 1 0.852465 24 3137 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - - - 100 19 - 0 72164(1|Redon(2006)) FALSE TRUE ipn_no algo_no NA 401603HH female - GSWW54097 X 89752140 89824303 72164 Loss 1 0.864864 24 3137 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - - - 100 19 - 0 72164(1|Redon(2006)) FALSE TRUE ipn_no algo_no NA 401620BA female - GQSZ37539 1 46469035 46541192 72158 Gain 3 0.901047 88 829 chas 76.68 Gain 78.11 Gain 0 - GainGain- 40 87.26 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1p34.1 - "MAST2,PIK3R3" 2 "MAST2,PIK3R3" 2 - - - 9377(2|Shaikh(2009)) - - 40 - 0 "39052(7|Pinto(2011),Teague(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" YTOE66394 1 116680559 116752657 72099 Gain 3 0.912229 84 868 chas 96.07 Gain 98.49 Gain 98.5 Gain GainGainGain 61 NA NA NA "ChAS,IPN,NXS,PTK" 1p13.1 - - 0 - 0 - - - "19755(2|Park(2010),Redon(2006))" 949(1|Conrad(2009)) - 61 - 0 "72099(5|Park(2010),Conrad(2009),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" FCFF79727 11 89474818 89546914 72097 Loss 1 0.886757 22 3433 chas 19.44 Loss 32.65 Loss 0 - LossLoss- 10 NA NA NA "ChAS,IPN,NXS" 11q14.3 - TRIM49 1 TRIM49 1 - - - "72097(15|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 10 - 0 "72097(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401384BP male research_filter KVGJ18529 11 89474818 89546914 72097 Loss 1 0.891443 22 3433 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "72097(15|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 10 - 0 "72097(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401636WR male - ZGTI52802 10 135355063 135427143 72081 Gain 3 0.893624 89 819 chas 93.56 Gain 37.87 Gain 100 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRNP1" 2 "SYCE1,SPRNP1" 2 - - - "72081(47|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 19 59 - 0 "72081(119|Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" WKAY66815 7 38319296 38391352 72057 Gain 3 0.875306 94 774 chas 0 - 0 - 0 - --- 110 94.5 Gain GTC ChAS 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "72057(29|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" 1 110 - 0 "72057(76|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no affy6_yes 400681MC female clinical_filter XFEU37018 17 43588041 43660058 72018 Gain 3 0.905318 22 3429 chas 0 - 15.82 Gain 0 - -Gain- 21 0 - - "ChAS,NXS" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "27593#1%""17q21.3 recurrent microdeletion syndrome"":577740" "72018(2|Stefansson(2005),Kidd(2008))" "72018(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 21 - 0 "72018(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400525MR male research_filter IEKT57966 19 55252034 55324041 72008 Loss 1 0.891123 16 4800 chas 76.56 Loss 88.27 Loss 0 - LossLoss- 26 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR2DL3,KIR2DL1,KIR2DL4" 3 "KIR2DL3,KIR2DL1,KIR2DL4" 3 - - - "72008(43|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 26 - 0 "72008(116|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400274TL female research_filter QITC50272 19 55252034 55324041 72008 Loss 1 0.893634 16 4800 chas 35.36 Loss 0 - 0 - Loss-- 26 NA NA NA "ChAS,IPN" 19q13.42 - "KIR2DL3,KIR2DL1,KIR2DL4" 3 "KIR2DL3,KIR2DL1,KIR2DL4" 3 - - - "72008(43|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 26 - 0 "72008(116|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401012TP female research_filter XNQF62194 19 55252034 55324041 72008 Loss 1 0.914657 16 4800 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR2DL4" 3 "KIR2DL3,KIR2DL1,KIR2DL4" 3 - - - "72008(43|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Shaikh(2009),Jakobsson(2008),Simon-Sanchez(2007),McCarroll(2008))" - 100 26 - 0 "72008(116|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401690HA male - VZCC67569 6 31384080 31456073 71994 Loss 1 0.914456 108 672 chas 83.32 Loss 96.64 Loss 96.64 Loss LossLossLoss 91 NA NA NA "ChAS,IPN,NXS,PTK" 6p21.33 - "HCP5,HCG26" 2 "HCP5,HCG26" 2 - - - "71994(56|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Matsuzaki(2009),Wang(2008),Bentley(2008),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "71994(16|Wang(2008),Levy(2007),Matsuzaki(2009))" 6 91 - 0 "71994(158|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Wang(2008),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2010b),Conrad(2006),Kidd(2008),Wilson(2010),De(Smith_2007),Conrad(2009),McKernan(2009),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Gusev(2009),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" GXLR90543 5 175570678 175642620 71943 Gain 3 0.899521 45 1635 chas 99.98 Gain 74.48 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 5q35.2 - LOC643201 1 LOC643201 1 - "71943#1%""Sotos syndrome"":2326144" - "71943(24|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" - 36 52 - 0 "71943(87|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401330RR female research_filter QRKX79081 7 38322939 38394857 71919 Gain 3 0.875178 88 826 chas 0 - 40.69 Gain 0 - -Gain- 106 0 - - "ChAS,NXS" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "71919(31|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 855(1|McKernan(2009)) 6 106 - 0 "71919(87|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400631SJ male "research_filter, clinical_filter" THKF48028 11 55374019 55445932 71914 Gain 3 0.885962 88 826 chas 0 - 99.97 Gain 0 - -Gain- 55 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "70870(2|Kidd(2008),Korbel(2007))" "71914(67|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 55 - 0 "71914(747|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400601WC female "research_filter, clinical_filter" RPWI18802 10 135355231 135427143 71913 Gain 3 0.889108 87 836 chas 93.78 Gain 46.47 Gain 100 Gain GainGainGain 58 NA NA NA "ChAS,IPN,NXS,PTK" 10q26.3 - "SYCE1,SPRNP1" 2 "SYCE1,SPRNP1" 2 - - - "71913(47|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 19 58 - 0 "71913(119|Korbel(2007),Wang(2007),Perry(2008b),Bentley(2008),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" HGZO79179 11 54701632 54773537 71906 Gain 4 0.938649 11 7190 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 11q11 - - 0 - 0 - - - "71906(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "71906(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401151RJ male - BMGG13461 10 18127910 18199800 71891 Loss 1 0.89716 16 4792 chas 0 - 0 - 0 - --- 8 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400002HK female - GUZB61909 10 18127910 18199800 71891 Loss 1 0.874054 16 4792 chas 0 - 0 - 0 - --- 8 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401029SD_1 female - GRYY36123 10 18127910 18199800 71891 Loss 1 0.88755 16 4792 chas 0 - 0 - 0 - --- 8 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 40031BA female - IXLI37228 10 18127910 18199800 71891 Loss 1 0.888836 16 4792 chas 0 - 0 - 0 - --- 8 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400241CP male - YMTT86375 10 18127910 18199800 71891 Loss 1 0.882169 16 4792 chas 0 - 0 - 0 - --- 8 0 - - ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400797ST male - NCUZ14929 10 18127910 18199800 71891 Loss 1 0.873943 16 4792 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401111LH male - GVUJ86973 10 18127910 18199800 71891 Loss 1 0.882644 16 4792 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400914ER male - KWBM98824 10 18127910 18199800 71891 Loss 1 0.886725 16 4792 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401212HJ female - PQBD71126 10 18127910 18199800 71891 Loss 1 0.875367 16 4792 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - - - 100 8 - 0 "71891(5|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401010HT female - TAVH54072 5 49481045 49552685 71641 Loss 1 0.91607 12 6512 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 5q11.1 - - 0 - 0 - - - "71641(5|Conrad(2009),Levy(2007),McKernan(2009),Ju(2010))" - - 9 - 0 "71641(23|Conrad(2009),McKernan(2009),Wong(2007),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400948EV female - FPLE23103 5 49481045 49552685 71641 Loss 1 0.882023 12 6512 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 5q11.1 - - 0 - 0 - - - "71641(5|Conrad(2009),Levy(2007),McKernan(2009),Ju(2010))" - - 9 - 0 "71641(23|Conrad(2009),McKernan(2009),Wong(2007),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400337HG male - NNNK99860 5 49481045 49552685 71641 Loss 1 0.895753 12 6512 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 5q11.1 - - 0 - 0 - - - "71641(5|Conrad(2009),Levy(2007),McKernan(2009),Ju(2010))" - - 9 - 0 "71641(23|Conrad(2009),McKernan(2009),Wong(2007),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400439IM female - XZOF13341 6 29864578 29936194 71617 Loss 1 0.936688 34 2170 chas 48.97 Loss 49 Loss 63 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71617(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71617(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400629BM female "research_filter, clinical_filter" UXJM82913 6 29864578 29936194 71617 Loss 1 0.882285 34 2170 chas 29.31 Loss 23.39 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71617(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71617(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401359HF male "research_filter, clinical_filter" SVIC15912 X 103171609 103243203 71595 Gain 3 0.883698 52 1403 chas 0 - 0 - 0 - --- 41 62.84 Gain "BS,IP6" ChAS Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "38564(4|Pang(2010),Kidd(2008),Tuzun(2005))" "55137(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 67 41 - 0 "71595(11|Conrad(2009),Redon(2006),Kidd(2010b),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 401113MJ female clinical_filter DOIH36842 13 57758276 57829868 71593 Loss 1 0.89537 72 1008 chas 84.66 Loss 92.65 Loss 100 Loss LossLossLoss 68 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.1 - - 0 - 0 - - - "71593(55|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),McKernan(2009),Shaikh(2009))" 858(1|Park(2010)) - 67 - 0 "71593(150|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" FPHR45460 6 29864509 29936041 71533 Loss 1 0.889909 33 2235 chas 44.08 Loss 63.18 Loss 63.17 Loss LossLossLoss 50 38.11 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401104DM female "research_filter, clinical_filter" WHSN55625 6 29864509 29936041 71533 Loss 1 0.895359 33 2235 chas 49.1 Loss 32.26 Loss 55.16 Loss LossLossLoss 50 0 - - "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 401354KM male "research_filter, clinical_filter" KLXQ40405 6 29864509 29936041 71533 Loss 1 0.890209 33 2235 chas 49.1 Loss 29.34 Loss 0 - LossLoss- 50 38.11 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400051MR_1 male "research_filter, clinical_filter" YMNO36133 6 29864509 29936041 71533 Loss 1 0.890596 33 2235 chas 49.1 Loss 47.43 Loss 0 - LossLoss- 50 46.45 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" YDLH53232 6 29864509 29936041 71533 Loss 1 0.885861 33 2235 chas 29.44 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401691HA male "research_filter, clinical_filter" FIIC23299 6 29864509 29936041 71533 Loss 1 0.902448 33 2235 chas 29.43 Loss 23.51 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71533(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71533(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400843FL female "research_filter, clinical_filter" IFUE20361 14 22723564 22795091 71528 Loss 1 0.848377 118 611 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "71528(12|Sebat(2004),Perry(2008),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 64 - 0 "71528(59|Sebat(2004),Wong(2007),Wang(2008),Perry(2008),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Conrad(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_no NA 401834CB female clinical_filter QRKX79081 6 165132749 165204250 71502 Gain 3 0.898594 52 1402 chas 86.23 Gain 92.98 Gain 0 - GainGain- 42 87.19 Gain "BS,IP6" "ChAS,IPN,NXS" 6q27 - - 0 - 0 - - - "71502(11|Itsara(2009),Kidd(2008),Levy(2007),McKernan(2009))" 1(1|Levy(2007)) - 42 - 0 "71502(20|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400631SJ male "research_filter, clinical_filter" QRNV11451 8 3685330 3756823 71494 Loss 1 0.924791 92 785 chas 100 Loss 96.03 Loss 96.03 Loss LossLossLoss 84 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - CSMD1 1 - 0 - - - "71494(6|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),Pinto(2007),Shaikh(2009))" - - 84 - 0 "71494(20|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" TUWR15724 6 29864578 29936041 71464 Loss 1 0.949927 32 2305 chas 49.07 Loss 55.48 Loss 63.14 Loss LossLossLoss 50 46.5 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401207DA male "research_filter, clinical_filter" ZMDC73313 6 29864578 29936041 71464 Loss 1 0.875741 32 2305 chas 44.12 Loss 32.2 Loss 55.12 Loss LossLossLoss 50 38.15 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401165SB female "research_filter, clinical_filter" ALWU32623 6 29864578 29936041 71464 Loss 1 0.945934 32 2305 chas 49.07 Loss 49.04 Loss 41.2 Loss LossLossLoss 50 46.5 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400595CP female "research_filter, clinical_filter" TCSA61368 6 29864578 29936041 71464 Loss 1 0.885156 32 2305 chas 49.07 Loss 0 - 0 - Loss-- 50 38.15 Loss IP6 "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" HXWA61262 6 29864578 29936041 71464 Loss 1 0.886393 32 2305 chas 31.6 Loss 34.35 Loss 47.38 Loss LossLossLoss 50 0 - - "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 401438HT male "research_filter, clinical_filter" ZRAK81940 6 29864578 29936041 71464 Loss 1 0.956822 32 2305 chas 49.07 Loss 49.1 Loss 99.91 Loss LossLossLoss 50 62.76 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401864CV female "research_filter, clinical_filter" PEZC72297 6 29864578 29936041 71464 Loss 1 0.89448 32 2305 chas 49.07 Loss 29.27 Loss 55.48 Loss LossLossLoss 50 38.15 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" JWQI23251 6 29864578 29936041 71464 Loss 1 0.898028 32 2305 chas 49.07 Loss 47.57 Loss 0 - LossLoss- 50 79.13 "Gain,Loss" "BS,IP6" "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400247CL male "research_filter, clinical_filter" WKJP80388 6 29864578 29936041 71464 Loss 1 0.889882 32 2305 chas 49.07 Loss 29.27 Loss 63.14 Loss LossLossLoss 50 0 - - "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_no 400320RN male "research_filter, clinical_filter" DOLM19463 6 29864578 29936041 71464 Loss 1 0.945304 32 2305 chas 49.07 Loss 49.1 Loss 49.02 Loss LossLossLoss 50 46.5 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401607LL male "research_filter, clinical_filter" EMAP66239 6 29864578 29936041 71464 Loss 1 0.891139 32 2305 chas 45.57 Loss 47.38 Loss 47.38 Loss LossLossLoss 50 38.15 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401618HR male "research_filter, clinical_filter" XBAT84080 6 29864578 29936041 71464 Loss 1 0.893452 32 2305 chas 24.43 Loss 49.1 Loss 0 - LossLoss- 50 30.7 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400186WC female "research_filter, clinical_filter" MAKG95944 6 29864578 29936041 71464 Loss 1 0.891601 32 2305 chas 49.07 Loss 0 - 0 - Loss-- 50 46.5 Loss IP6 "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400041LJ male "research_filter, clinical_filter" YLVO48162 6 29864578 29936041 71464 Loss 0 0.945213 32 2305 chas 49.07 Loss 55.48 Loss 99.91 Loss LossLossLoss 50 59.59 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400876OG male "research_filter, clinical_filter" HOIC14625 6 29864578 29936041 71464 Loss 1 0.885383 32 2305 chas 49.07 Loss 17.28 Loss 55.48 Loss LossLossLoss 50 38.15 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400619MP male "research_filter, clinical_filter" VUCC31552 6 29864578 29936041 71464 Loss 1 0.947495 32 2305 chas 79.13 Loss 49.1 Loss 63.14 Loss LossLossLoss 50 46.5 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400109LJ male "research_filter, clinical_filter" RDBP35321 6 29864578 29936041 71464 Loss 1 0.877391 32 2305 chas 49.07 Loss 0 - 55.12 Loss Loss-Loss 50 NA NA NA "ChAS,IPN,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" WSSG80726 6 29864578 29936041 71464 Loss 1 0.93174 32 2305 chas 49.07 Loss 49.1 Loss 55.12 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" LRBG51365 6 29864578 29936041 71464 Loss 1 0.895497 32 2305 chas 34.92 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400886MP female "research_filter, clinical_filter" DLXG88049 6 29864578 29936041 71464 Loss 1 0.891863 32 2305 chas 49.07 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" DOUQ66820 6 29864578 29936041 71464 Loss 1 0.88074 32 2305 chas 49.07 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" YJHX17222 6 29864578 29936041 71464 Loss 1 0.881028 32 2305 chas 44.12 Loss 23.44 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" WNMH95182 6 29864578 29936041 71464 Loss 1 0.874669 32 2305 chas 49.07 Loss 14.29 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" TCTA60809 6 29864578 29936041 71464 Loss 1 0.883296 32 2305 chas 51.77 Loss 44.89 Loss 53.43 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401965TG female "research_filter, clinical_filter" NGFJ29672 6 29864578 29936041 71464 Loss 1 0.882694 32 2305 chas 29.38 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400269DA female "research_filter, clinical_filter" APGE11753 6 29864578 29936041 71464 Loss 1 0.895054 32 2305 chas 29.38 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" ATJL19217 6 29864578 29936041 71464 Loss 1 0.89229 32 2305 chas 29.38 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401608GE female "research_filter, clinical_filter" XNFN85306 6 29864578 29936041 71464 Loss 1 0.889239 32 2305 chas 79.13 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" KJKF45195 6 29864578 29936041 71464 Loss 1 0.887343 32 2305 chas 29.38 Loss 23.44 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401132CH male "research_filter, clinical_filter" QXHS37749 6 29864578 29936041 71464 Loss 1 0.897154 32 2305 chas 79.13 Loss 55.12 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401943KA male "research_filter, clinical_filter" OWWR99794 6 29864578 29936041 71464 Loss 1 0.890455 32 2305 chas 29.38 Loss 32.2 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" RPWI18802 6 29864578 29936041 71464 Loss 1 0.88279 32 2305 chas 29.38 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401580CA male "research_filter, clinical_filter" WGSV83254 6 29864578 29936041 71464 Loss 1 0.904546 32 2305 chas 29.38 Loss 49.1 Loss 49.09 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" INSC49339 6 29864578 29936041 71464 Loss 1 0.887875 32 2305 chas 29.38 Loss 27.14 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401334DH female "research_filter, clinical_filter" BTMS28214 6 29864578 29936041 71464 Loss 1 0.900856 32 2305 chas 29.38 Loss 40.4 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" ENVJ37912 6 29864578 29936041 71464 Loss 1 0.891009 32 2305 chas 29.38 Loss 23.44 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400532MH male "research_filter, clinical_filter" LELT20618 6 29864578 29936041 71464 Loss 0 0.952781 32 2305 chas 51.77 Loss 53.43 Loss 63.14 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400211BJ female "research_filter, clinical_filter" GDZR23108 6 29864578 29936041 71464 Loss 1 0.895373 32 2305 chas 29.38 Loss 47.38 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400375KA female "research_filter, clinical_filter" QITC50272 6 29864578 29936041 71464 Loss 0 0.956049 32 2305 chas 51.77 Loss 55.12 Loss 55.92 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" AMDW97336 6 29864578 29936041 71464 Loss 1 0.900071 32 2305 chas 29.38 Loss 23.44 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401281BP male "research_filter, clinical_filter" XNCW62958 6 29864578 29936041 71464 Loss 1 0.890023 32 2305 chas 79.13 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" JTMA20495 6 29864578 29936041 71464 Loss 1 0.886404 32 2305 chas 79.13 Loss 20.95 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" OUKT23649 6 29864578 29936041 71464 Loss 1 0.884639 32 2305 chas 29.38 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400450FG male "research_filter, clinical_filter" PNEQ37885 6 29864578 29936041 71464 Loss 1 0.904763 32 2305 chas 79.13 Loss 45.05 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" YPPO84595 6 29864578 29936041 71464 Loss 0 0.952005 32 2305 chas 79.13 Loss 49.1 Loss 63.14 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71464(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71464(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401857VG male "research_filter, clinical_filter" TAVH54072 19 55307868 55379245 71378 Loss 1 0.889946 48 1518 chas 36.37 Loss 78.09 Loss 99.61 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "71378(47|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 45 - 0 "71378(101|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400948EV female "research_filter, clinical_filter" OWWC21327 19 55307868 55379245 71378 Loss 1 0.872142 48 1518 chas 0 - 20.76 Loss 0 - -Loss- 45 NA NA NA "ChAS,NXS" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "71378(47|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 45 - 0 "71378(101|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 400547BS female "research_filter, clinical_filter" WMOD47474 6 29864578 29935893 71316 Loss 1 0.884904 31 2377 chas 29.44 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "71316(59|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 25 50 - 0 "71316(356|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" TAVH54072 8 47382788 47454050 71263 Loss 1 0.903034 31 2375 chas 0 - 67.92 Loss 100 Loss #NAME? 27 NA NA NA "ChAS,NXS,PTK" 8q11.1 - - 0 - 0 - - - "71263(8|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" 853(1|Conrad(2009)) - 27 - 0 "71263(33|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Simon-Sanchez(2007))" TRUE TRUE ipn_no algo_yes NA 400948EV female "research_filter, clinical_filter" LMJA76842 X 80155849 80227090 71242 Gain 3 0.895238 32 2298 chas 81.09 Gain 0 - 0 - Gain-- 38 NA NA NA "ChAS,IPN" Xq21.1 - - 0 - 0 - - - "71242(4|de Smith(2007),Conrad(2009),Matsuzaki(2009))" - 15 38 - 0 "71242(6|Teague(2010),Korbel(2007),De(Smith_2007),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_yes algo_yes NA 401284GM female research_filter GLGF34868 9 138139989 138211207 71219 Gain 3 0.903768 32 2297 chas 89.24 Gain 94.61 Gain 0 - GainGain- 46 NA NA NA "ChAS,IPN,NXS" 9q34.3 - - 0 - 0 - - - "71219(14|Wang(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Pinto(2007),Park(2010),Mills(2006),Kim(2009),Zogopoulos(2007))" "694(2|Levy(2007),Mills(2006))" - 46 - 0 "71219(63|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Pinto(2011),Kim(2009),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401268PS male research_filter IUXY17884 7 10543007 10614001 70995 Gain 3 0.90677 49 1479 chas 99.98 Gain 99.98 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 7p21.3 - - 0 - 0 - - - "32030(3|Ahn(2009),Shaikh(2009),Bentley(2008))" - - 56 - 0 "70995(8|Teague(2010),Ahn(2009),Durbin(2010),Shaikh(2009),Bentley(2008))" FALSE TRUE ipn_yes algo_yes NA 401238QR male research_filter PDHC59420 Y 20953627 21024601 70975 Loss 0 0.844516 35 2087 chas 100 Loss 0 - 0 - Loss-- 38 NA NA NA "ChAS,IPN" Yq11.222 - - 0 - 0 - "70975#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - - - 100 37 - 0 "54453(2|Teague(2010),Redon(2006))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" VKGU19422 17 77827973 77898934 70962 Gain 3 0.905611 56 1290 chas 78.93 Gain 96.36 Gain 0 - GainGain- 75 NA NA NA "ChAS,IPN,NXS" 17q25.3 - - 0 - 0 - - - "2349(2|Park(2010),Perry(2008))" 284(1|Mills(2006)) - 75 - 0 "70962(11|Jakobsson(2008),Perry(2008),Iafrate(2004),Durbin(2010),Locke(2006),Park(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400778SR female "research_filter, clinical_filter" XMAJ27378 16 6968649 7039598 70950 Loss 1 0.925066 208 342 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 70 99.89 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - "70950(4|Redon(2006),Matsuzaki(2009),Zogopoulos(2007))" - - 70 - 0 "70950(7|Itsara(2009),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401100SJ female "research_filter, clinical_filter" KLEB18411 13 106286618 106357562 70945 Loss 1 0.928785 37 1970 chas 87 Loss 93.48 Loss 93.48 Loss LossLossLoss 41 86.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q33.2 - - 0 - 0 - - - "26278(2|Itsara(2009),Park(2010))" 1(1|Levy(2007)) - 41 - 0 "70945(12|Pinto(2011),Itsara(2009),Jakobsson(2008),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" SBZX25020 7 142820793 142891708 70916 Loss 1 0.904551 84 854 chas 89.9 Loss 100 Loss 94.91 Loss LossLossLoss 34 89.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 34 - 0 "70916(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" JSXF59945 7 142820793 142891708 70916 Loss 1 0.91626 84 854 chas 89.9 Loss 94.9 Loss 94.91 Loss LossLossLoss 34 89.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 34 - 0 "70916(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female "research_filter, clinical_filter" ZVRQ32621 7 142820793 142891708 70916 Loss 1 0.914296 84 854 chas 89.9 Loss 94.9 Loss 94.91 Loss LossLossLoss 34 89.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 34 - 0 "70916(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401176BD male "research_filter, clinical_filter" TGEI86896 7 142820793 142891708 70916 Loss 1 0.937722 84 854 chas 89.9 Loss 94.9 Loss 94.91 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 34 - 0 "70916(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401742KB male "research_filter, clinical_filter" XCWR96625 7 142820793 142891708 70916 Loss 1 0.903104 84 854 chas 89.9 Loss 84.92 Loss 94.91 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 34 - 0 "70916(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400158FB male "research_filter, clinical_filter" AQKH94698 10 46966534 47037427 70894 Loss 1 0.858988 84 854 chas 0 - 0 - 0 - --- 53 0 - - ChAS 10q11.22 - "GPRIN2,SYT15" 2 "GPRIN2,SYT15" 2 - - "27109(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "70894(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 53 - 0 "70894(187|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no affy6_no 400955BE male clinical_filter QMEK60192 2 13202931 13273736 70806 Gain 3 0.913651 40 1815 chas 100 Gain 95.43 Gain 0 - GainGain- 35 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - "70806(4|Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" - - 35 - 0 "70806(17|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401711WS male research_filter KNEY83753 4 161860918 161931652 70735 Gain 4 0.944333 48 1505 chas 95.89 Gain 97.9 Gain 97.9 Gain GainGainGain 90 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.2 - - 0 - 0 - - - "70735(33|Wang(2007),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Ju(2010),Park(2010),McCarroll(2005),Jakobsson(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 500(1|Shaikh(2009)) - 90 - 0 "70735(223|Teague(2010),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Wang(2007),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),Ju(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400411TG male research_filter PYXL51166 7 142828724 142899393 70670 Loss 1 0.937003 84 851 chas 89.14 Loss 93.23 Loss 93.23 Loss LossLossLoss 36 89.14 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "54634(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 36 - 0 "70670(10|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401146US female "research_filter, clinical_filter" GZBA26596 7 142828724 142899393 70670 Loss 1 0.926278 84 851 chas 89.14 Loss 93.23 Loss 93.23 Loss LossLossLoss 36 89.14 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "54634(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 36 - 0 "70670(10|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400150SS female "research_filter, clinical_filter" XOQW96687 3 4333903 4404525 70623 Gain 3 0.89156 80 893 chas 78.01 Gain 95.41 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 3p26.1 - "SUMF1,SETMAR" 2 "SUMF1,SETMAR" 2 SUMF1 - - "2049(2|Wang(2008),Ahn(2009))" - - 63 - 0 "70623(12|Ahn(2009),Jakobsson(2008),Wang(2008),Durbin(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" AVKM43792 9 2287088 2357682 70595 Loss 1 0.927463 68 1053 chas 92.65 Loss 83.53 Loss 83.53 Loss LossLossLoss 84 90.44 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.2 - - 0 - 0 - - - "935(3|Conrad(2009),Matsuzaki(2009))" "2562(8|Pang(2010),Conrad(2009),Levy(2007),McKernan(2009),Matsuzaki(2009))" - 84 - 0 "70595(14|Itsara(2009),Conrad(2009),Pang(2010),McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401246HH male "research_filter, clinical_filter" TABQ91013 14 67053045 67123638 70594 Loss 1 0.914579 104 685 chas 99.98 Loss 95.89 Loss 99.98 Loss LossLossLoss 29 NA NA NA "ChAS,IPN,NXS,PTK" 14q23.3 - GPHN 1 - 0 GPHN - - - 1(1|Mills(2006)) - 29 - 0 "70594(7|Pinto(2011),Teague(2010),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" IOGU88526 14 67053046 67123638 70593 Loss 1 0.917698 103 692 chas 99.98 Loss 99.98 Loss 99.98 Loss LossLossLoss 29 NA NA NA "ChAS,IPN,NXS,PTK" 14q23.3 - GPHN 1 - 0 GPHN - - - 1(1|Mills(2006)) - 29 - 0 "70593(7|Pinto(2011),Teague(2010),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401623SN male "research_filter, clinical_filter" JWHR52164 4 189319748 189390338 70591 Gain 3 0.906004 56 1283 chas 100 Gain 100 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 4q35.2 - LOC401164 1 LOC401164 1 - - - "70591(9|Ju(2010),Conrad(2009),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Zogopoulos(2007))" "495(3|Levy(2007),Bentley(2008))" 6 56 - 0 "70591(56|Teague(2010),Ju(2010),Conrad(2009),Itsara(2009),Levy(2007),Sharp(2005),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Campbell(2011),Pinto(2011),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400984LD female "research_filter, clinical_filter" VAOW46427 16 78045125 78115674 70550 Loss 1 0.936329 81 881 chas 100 Loss 100 Loss 100 Loss LossLossLoss 63 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16q23.1 - CLEC3A 1 CLEC3A 1 - - - "18760(3|Wang(2007),Matsuzaki(2009),Shaikh(2009))" 196(1|Mills(2006)) 2 63 - 0 "70550(7|Wang(2007),Wong(2007),Shaikh(2009),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" RWTQ90156 10 134155901 134226413 70513 Gain 4 0.950979 64 1119 chas 99.98 Gain 88.37 Gain 81.51 Gain GainGainGain 38 68.62 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 10q26.3 - "LRRC27,PWWP2B" 2 "LRRC27,PWWP2B" 2 - - - "67693(8|Itsara(2009),Conrad(2009),Jakobsson(2008),Park(2010))" "3564(12|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Mills(2006))" - 38 - 0 "70513(72|Conrad(2009),Ahn(2009),Wong(2007),Jakobsson(2008),Kidd(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Park(2010),Pinto(2011),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400717BD male "research_filter, clinical_filter" ZGTI52802 9 28620372 28690878 70507 Loss 1 0.928644 80 892 chas 97.78 Loss 97.8 Loss 97.8 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - LINGO2 1 LINGO2 1 - - - "70507(12|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Shaikh(2009),Zogopoulos(2007))" - - 48 - 0 "70507(15|Wang(2007),Redon(2006),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" ZSEZ81141 9 10254793 10325251 70459 Gain 3 0.912822 85 838 chas 100 Gain 99.92 Gain 99.92 Gain GainGainGain 70 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p23 - PTPRD 1 - 0 - - - 10311(2|Shaikh(2009)) - - 70 - 0 "70459(4|Itsara(2009),Redon(2006),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" EATF12348 2 130804103 130874475 70373 Loss 1 0.876204 24 3059 chas 0 - 46.17 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q21.1 - "POTEF,LOC440905" 2 "POTEF,LOC440905" 2 - - - "70373(13|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 89 13 - 0 "70373(34|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400352CA female research_filter VKJV88264 19 29932099 30002377 70279 Gain 3 0.911435 65 1098 chas 92.17 Gain 92.21 Gain 0 - GainGain- 60 95.18 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19q12 - LOC284395 1 - 0 - - - "11768(11|Conrad(2009),Ahn(2009),Korbel(2007),Matsuzaki(2009),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008))" - - 60 - 0 "70279(36|Conrad(2009),Ahn(2009),Wong(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 401950MD male "research_filter, clinical_filter" YSLM40888 7 38286515 38356732 70218 Gain 3 0.872658 92 771 chas 0 - 62.21 Gain 0 - -Gain- 96 71.13 Gain GTC "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "70218(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 45 96 - 0 "70218(57|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400460DM female "research_filter, clinical_filter" CUZZ77277 15 77506427 77576602 70176 Loss 1 0.909803 60 1189 chas 88.07 Loss 78.42 Loss 95.09 Loss LossLossLoss 24 89.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q24.3 - "C15orf5,PEAK1" 2 "C15orf5,PEAK1" 2 - - - 27839(1|de Smith(2007)) - 2 24 - 0 "70176(6|Pinto(2011),Kidd(2008),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" SXXB40252 X 154669330 154739500 70171 Gain 2 0.883459 16 4678 chas 35.28 Gain 0 - 0 - Gain-- 8 NA NA NA "ChAS,IPN" Xq28 - "F8A1,F8A3,F8A2,H2AFB3,H2AFB2,H2AFB1,MIR1184-1,MIR1184-2,MIR1184-3,LOC100507404,TMLHE" 11 "F8A1,F8A3,F8A2,H2AFB3,H2AFB2,H2AFB1,MIR1184-1,MIR1184-2,MIR1184-3,LOC100507404,TMLHE" 11 - - 70171(2|Kidd(2008)) "70171(2|Wang(2007),Levy(2007))" - 72 8 - 0 "70171(9|Wang(2007),Kidd(2010b),Levy(2007),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401495NR male research_filter YRQD30893 19 6951983 7022142 70160 Loss 1 0.911386 76 935 chas 76.47 Loss 88.23 Loss 88.23 Loss LossLossLoss 50 81.49 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p13.2 - "EMR4P,FLJ25758" 2 "EMR4P,FLJ25758" 2 - - - "70160(22|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 332(1|Wheeler(2008)) 5 50 - 0 "70160(58|Conrad(2009),Wong(2007),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Wilson(2010),Simon-Sanchez(2007),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401022ML female "research_filter, clinical_filter" ZJNH41176 19 6951983 7022142 70160 Loss 1 0.9172 76 935 chas 76.47 Loss 88.23 Loss 88.23 Loss LossLossLoss 50 91.6 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p13.2 - "EMR4P,FLJ25758" 2 "EMR4P,FLJ25758" 2 - - - "70160(22|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 332(1|Wheeler(2008)) 5 50 - 0 "70160(58|Conrad(2009),Wong(2007),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Wilson(2010),Simon-Sanchez(2007),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400285FA female "research_filter, clinical_filter" TPCN38834 19 6951983 7022142 70160 Loss 1 0.920917 76 935 chas 76.47 Loss 88.23 Loss 88.23 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 19p13.2 - "EMR4P,FLJ25758" 2 "EMR4P,FLJ25758" 2 - - - "70160(22|Conrad(2009),Matsuzaki(2009),Ju(2010),de Smith(2007),McKernan(2009),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 332(1|Wheeler(2008)) 5 50 - 0 "70160(58|Conrad(2009),Wong(2007),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Wilson(2010),Simon-Sanchez(2007),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" DQHB62647 8 47366668 47436779 70112 Loss 1 0.891433 28 2596 chas 0 - 43.88 Loss 87.65 Loss #NAME? 25 NA NA NA "ChAS,NXS,PTK" 8q11.1 - - 0 - 0 - - - "70112(10|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),McKernan(2009),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" "1682(6|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008))" - 25 - 0 "70112(52|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Wilson(2010),Simon-Sanchez(2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401732HW male "research_filter, clinical_filter" YDHD10968 3 61654161 61724169 70009 Loss 1 0.930694 80 886 chas 85.15 Loss 92.42 Loss 92.43 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" 3p14.2 - PTPRG 1 - 0 - - - 1946(1|Mills(2006)) "401(5|Pang(2010),Levy(2007),McKernan(2009),Hinds(2005),Bentley(2008))" - 48 - 0 "70009(19|Pang(2010),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Hinds(2006),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401355CD male "research_filter, clinical_filter" KAAS48951 17 43586397 43656400 70004 Loss 1 0.89484 13 5833 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "23935#1%""17q21.3 recurrent microdeletion syndrome"":577740" "70004(2|Stefansson(2005),Kidd(2008))" "70004(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 12 - 0 "70004(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401504RJ male - LNDH30137 17 43586397 43656400 70004 Loss 1 0.906522 13 5833 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "23935#1%""17q21.3 recurrent microdeletion syndrome"":577740" "70004(2|Stefansson(2005),Kidd(2008))" "70004(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 12 - 0 "70004(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401808PS male - KXKI34745 8 122323994 122393961 69968 Gain 3 0.895305 38 1891 chas 91.74 Gain 100 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 8q24.12 - - 0 - 0 - - - "17953(6|Conrad(2009),McCarroll(2008),Altshuler(2010),Shaikh(2009),Matsuzaki(2009))" - - 42 - 0 "69968(11|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Altshuler(2010),Campbell(2011),Pinto(2011),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401994BD male research_filter ZGTI52802 6 165134320 165204250 69931 Gain 3 0.915205 51 1398 chas 77.57 Gain 84.6 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 6q27 - - 0 - 0 - - - "69931(11|Itsara(2009),Kidd(2008),Levy(2007),McKernan(2009))" 1(1|Levy(2007)) - 41 - 0 "69931(20|Wong(2007),Jakobsson(2008),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" RSYQ67471 3 22235890 22305788 69899 Gain 3 0.905421 61 1164 chas 97.41 Gain 98.71 Gain 0 - GainGain- 69 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3p24.3 - - 0 - 0 - - - "17945(5|de Smith(2007),Kidd(2008),Park(2010),Matsuzaki(2009),Conrad(2009))" - - 69 - 0 "48094(26|Conrad(2009),Redon(2006),Kidd(2008),Campbell(2011),Durbin(2010),Kidd(2010b),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400624RJ male "research_filter, clinical_filter" QGND60775 5 177157387 177227216 69830 Loss 1 0.916285 10 7758 chas 0 - 0 - 0 - --- 5 58.79 Loss BS ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "69830#1%""Sotos syndrome"":2326144" - "69830(6|de Smith(2007),Kidd(2008),McCarroll(2008),Shaikh(2009),Conrad(2009))" - 100 5 - 0 "69830(20|Teague(2010),Conrad(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_yes 401085LA_1 female - MRAO63769 5 97050361 97120170 69810 Loss 1 0.90971 42 1702 chas 62.13 Loss 65.4 Loss 65.39 Loss LossLossLoss 50 74.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "69810(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 392(1|Bentley(2008)) - 50 - 0 "69810(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" ZVON68408 X 101624580 101694377 69798 Loss 1 0.894571 10 7755 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 4 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400688FL female - UCQK65306 6 29086023 29155749 69727 Loss 1 0.925932 50 1423 chas 84.13 Loss 85.12 Loss 100 Loss LossLossLoss 9 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - OR2J2 1 OR2J2 1 - - - "64211(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 15 9 - 0 "69727(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" WTDT99871 7 142827954 142897669 69716 Loss 1 0.937144 85 829 chas 91.47 Loss 95.61 Loss 99.89 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 34 - 0 "69716(10|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401505WI male "research_filter, clinical_filter" GZBA26596 22 38118222 38187935 69714 Gain 3 0.898604 64 1106 chas 0 - 58.09 Gain 0 - -Gain- 27 0 - - "ChAS,NXS" 22q13.1 - TRIOBP 1 TRIOBP 1 TRIOBP - - 51108(1|Park(2010)) "1933(9|Levy(2007),Matsuzaki(2009),Perry(2008))" - 27 - 0 "69714(12|Redon(2006),Perry(2008),Levy(2007),Durbin(2010),Pinto(2011),Park(2010),Jakobsson(2008))" TRUE TRUE ipn_no algo_yes affy6_no 400150SS female "research_filter, clinical_filter" MFZY15027 16 72141162 72210865 69704 Gain 3 0.903968 68 1040 chas 58.25 Gain 100 Gain 100 Gain GainGainGain 43 NA NA NA "ChAS,IPN,NXS,PTK" 16q22.2 - "DHX38,PMFBP1" 2 "DHX38,PMFBP1" 2 - - - - - - 43 - 0 "69704(6|Kidd(2008),Wong(2007),Redon(2006),Durbin(2010),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 401739BJ male "research_filter, clinical_filter" WQLF68770 11 55393295 55462994 69700 Gain 3 0.878632 84 839 chas 0 - 85.02 Gain 0 - -Gain- 44 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "68656(2|Kidd(2008),Korbel(2007))" "69700(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "69700(742|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401437MJ male "research_filter, clinical_filter" SBZX25020 6 78972075 79041760 69686 Loss 1 0.937844 25 2903 chas 90.56 Loss 90.56 Loss 97.77 Loss LossLossLoss 111 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "69686(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "69686(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" BDYF88242 1 179323738 179393328 69591 Gain 3 0.8952 97 724 chas 67.82 Gain 89.47 Gain 94.34 Gain GainGainGain 40 88.78 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 1q25.2 - "AXDND1,SOAT1" 2 "AXDND1,SOAT1" 2 - - - "16198(9|de Smith(2007),Conrad(2009),McCarroll(2008),Altshuler(2010),Matsuzaki(2009))" 886(4|Matsuzaki(2009)) - 40 - 0 "69591(38|Conrad(2009),Durbin(2010),Altshuler(2010),Campbell(2011),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" CWGV78054 6 78972075 79041633 69559 Loss 1 0.877595 23 3161 chas 90.73 Loss 0 - 0 - Loss-- 110 90.73 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "69559(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 110 - 0 "69559(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400599CP female research_filter PXVB29564 6 78972075 79041633 69559 Loss 1 0.876976 23 3161 chas 90.73 Loss 0 - 0 - Loss-- 110 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "69559(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 110 - 0 "69559(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400818BL female research_filter IWPA56866 6 78972075 79041633 69559 Loss 1 0.881019 23 3161 chas 90.73 Loss 95.37 Loss 0 - LossLoss- 110 NA NA NA "ChAS,IPN,NXS" 6q14.1 - - 0 - 0 - - - "69559(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 110 - 0 "69559(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401700BN_1 female research_filter ZIOC12306 6 78972075 79041633 69559 Loss 1 0.877004 23 3161 chas 0 - 0 - 0 - --- 110 90.73 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "69559(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 110 - 0 "69559(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400852WJ male - TPCN38834 3 4240740 4310297 69558 Loss 1 0.917867 36 1987 chas 73.07 Loss 86.43 Loss 86.43 Loss LossLossLoss 36 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "69558(8|Itsara(2009),Redon(2006),Shaikh(2009),Zogopoulos(2007))" "806(2|Levy(2007),Perry(2008))" - 36 - 0 "69558(11|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400879DS female "research_filter, clinical_filter" JSIF57066 9 22685404 22754960 69557 Loss 1 0.934057 32 2243 chas 89.29 Loss 94.57 Loss 94.58 Loss LossLossLoss 46 90.85 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.3 - FLJ35282 1 FLJ35282 1 - - - "10942(2|Pinto(2007),Redon(2006))" - 5 46 - 0 "17825(9|Pinto(2011),Pinto(2007),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400512LR female "research_filter, clinical_filter" TQFG68171 7 142827954 142897485 69532 Loss 1 0.93938 84 837 chas 91.71 Loss 95.86 Loss 95.86 Loss LossLossLoss 34 91.71 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 34 - 0 "69532(10|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" YCLA52151 5 97050612 97120008 69397 Loss 1 0.896155 40 1779 chas 62.14 Loss 65.43 Loss 65.42 Loss LossLossLoss 48 75.25 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "69397(24|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 230(1|Bentley(2008)) - 48 - 0 "69397(73|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Gusev(2009),Altshuler(2010),Campbell(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400173KP female "research_filter, clinical_filter" VOUF55858 2 50879142 50948464 69323 Loss 1 0.920498 233 298 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 65 99.94 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p16.3 - NRXN1 1 - 0 NRXN1 - - - 501(1|Park(2010)) - 65 NRXN1#asd_known 1 "61239(4|Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400338SR male "research_filter, clinical_filter" DVRF47676 1 210615279 210684528 69250 Loss 1 0.917166 84 834 chas 99.98 Loss 99.98 Loss 99.98 Loss LossLossLoss 70 NA NA NA "ChAS,IPN,NXS,PTK" 1q32.2 - HHAT 1 HHAT 1 - - - "6916(2|McKernan(2009),Redon(2006))" "255(3|Pang(2010),Levy(2007),Bentley(2008))" - 70 - 0 "50208(13|Banerjee(2011),Redon(2006),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008))" TRUE TRUE ipn_yes algo_yes NA 401847RK male "research_filter, clinical_filter" MRAO63769 20 29436789 29506001 69213 Loss 1 0.881799 22 3295 chas 0 - 0 - 0 - --- 24 99.84 Loss "BS,IP6" ChAS 20q11.21 - - 0 - 0 - - - "69213(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 24 - 0 "69213(17|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no affy6_yes 400093BL female - PGEB85888 20 29436789 29506001 69213 Loss 1 0.883343 22 3295 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS 20q11.21 - - 0 - 0 - - - "69213(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 24 - 0 "69213(17|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no NA 401582GG female - OULL87238 20 29436789 29506001 69213 Loss 1 0.893177 22 3295 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS 20q11.21 - - 0 - 0 - - - "69213(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 24 - 0 "69213(17|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no NA 401845MJ male - CZJD30358 9 203862 273057 69196 Gain 3 0.890591 300 231 chas 72.14 Gain 81.88 Gain 93.36 Gain GainGainGain 101 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.3 - "DOCK8,C9orf66" 2 "DOCK8,C9orf66" 2 DOCK8 - - "69196(16|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Itsara(2009),Pinto(2007),McCarroll(2005),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 751(1|Perry(2008)) - 101 - 0 "69196(25|Conrad(2009),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Kidd(2008),Pinto(2007),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400063BR female "research_filter, clinical_filter" ZVZK64221 15 56295062 56364180 69119 Gain 3 0.904334 60 1171 chas 95.5 Gain 97.41 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 15q21.3 - - 0 - 0 - - - "29390(5|Itsara(2009),Park(2010),Matsuzaki(2009),Shaikh(2009))" - 5 52 - 0 "67772(17|Teague(2010),Wong(2007),Itsara(2009),Durbin(2010),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401911FL male "research_filter, clinical_filter" ZNRO68615 Y 27723761 27792836 69076 Gain 2 0.850847 116 600 chas 100 Gain 0 - 0 - Gain-- 24 NA NA NA "ChAS,IPN" Yq11.23 - "CDY1B,CDY1" 2 "CDY1B,CDY1" 2 - "69076#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "69076(2|McCarroll(2008),Perry(2008))" - 100 24 - 0 "69076(5|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401862AN male "research_filter, clinical_filter" VWRZ18168 X 74403207 74472278 69072 Gain 2 0.944065 32 2228 chas 99.81 Gain 0 - 0 - Gain-- 28 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq13.3 - - 0 - 0 - - - 10301(1|Conrad(2009)) 932(5|Matsuzaki(2009)) - 28 - 0 "14307(3|Conrad(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400890IT male research_filter QVOH35939 X 74403207 74472278 69072 Gain 2 0.938236 32 2228 chas 99.81 Gain 0 - 0 - Gain-- 28 NA NA NA "ChAS,IPN" Xq13.3 - - 0 - 0 - - - 10301(1|Conrad(2009)) 932(5|Matsuzaki(2009)) - 28 - 0 "14307(3|Conrad(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400291VJ male research_filter INSC49339 11 54940453 55009463 69011 Loss 1 0.902886 17 4313 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 11q11 - - 0 - 0 - - - "69011(7|Conrad(2009),Pinto(2007),Ju(2010),Altshuler(2010),McCarroll(2008))" "1571(3|Levy(2007),Ahn(2009))" - 6 - 0 "69011(34|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Teague(2010),Levy(2007),Altshuler(2010),Durbin(2010),Wilson(2010),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401334DH female - YLSX27992 11 54940342 55009349 69008 Loss 1 0.912156 16 4600 chas 60.67 Loss 0 - 0 - Loss-- 7 63.39 Loss BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "69008(7|Conrad(2009),Pinto(2007),Ju(2010),Altshuler(2010),McCarroll(2008))" "1571(3|Levy(2007),Ahn(2009))" - 7 - 0 "69008(34|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Teague(2010),Levy(2007),Altshuler(2010),Durbin(2010),Wilson(2010),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400381CA female research_filter PGEB85888 11 54940342 55009349 69008 Loss 1 0.888377 16 4600 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 11q11 - - 0 - 0 - - - "69008(7|Conrad(2009),Pinto(2007),Ju(2010),Altshuler(2010),McCarroll(2008))" "1571(3|Levy(2007),Ahn(2009))" - 7 - 0 "69008(34|Conrad(2009),Ahn(2009),Wong(2007),Ju(2010),Teague(2010),Levy(2007),Altshuler(2010),Durbin(2010),Wilson(2010),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401582GG female - QVQY90814 1 31852867 31921862 68996 Loss 1 0.910084 54 1301 chas 45.57 Loss 54.55 Loss 57.97 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 1p35.2 - SERINC2 1 SERINC2 1 - - - "68996(8|Pang(2010),Redon(2006),Matsuzaki(2009))" "1505(8|Conrad(2009),Levy(2007),Matsuzaki(2009))" - 57 - 0 "68996(11|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401311GL female "research_filter, clinical_filter" THNQ55263 7 157732404 157801372 68969 Gain 3 0.906705 76 919 chas 96.13 Gain 98.07 Gain 100 Gain GainGainGain 59 NA NA NA "ChAS,IPN,NXS,PTK" 7q36.3 - PTPRN2 1 - 0 - - - "68969(6|Itsara(2009),Conrad(2009),Ahn(2009),Pinto(2007),Simon-Sanchez(2007))" "1456(10|Conrad(2009),Levy(2007),Matsuzaki(2009),Mills(2006))" - 59 - 0 "68969(64|Teague(2010),Ahn(2009),Wong(2007),Jakobsson(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wilson(2010),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400960TN female "research_filter, clinical_filter" VUND65965 11 55376010 55444975 68966 Gain 3 0.873765 78 895 chas 0 - 97.52 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67922(2|Kidd(2008),Korbel(2007))" "68966(64|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 49 - 0 "68966(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401498HH male "research_filter, clinical_filter" RGHO54100 17 43586368 43655331 68964 Loss 1 0.925015 12 6269 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68964(2|Stefansson(2005),Kidd(2008))" "68964(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68964(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401882CR male - ORXH15927 17 43586397 43655331 68935 Loss 1 0.915852 10 7659 chas 0 - 0 - 98.79 Loss #NAME? 10 90.1 Loss BS "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400266BA female research_filter CSHY74530 17 43586397 43655331 68935 Loss 1 0.915181 10 7659 chas 0 - 0 - 98.79 Loss #NAME? 10 90.1 Loss BS "ChAS,PTK" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400148MS female research_filter EZDG77492 17 43586397 43655331 68935 Loss 1 0.928749 10 7659 chas 0 - 100 Loss 0 - -Loss- 10 90.1 Loss BS "ChAS,NXS" 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400308SP male research_filter WKAY66815 17 43586397 43655331 68935 Loss 1 0.911581 10 7659 chas 0 - 0 - 0 - --- 10 90.1 Loss BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400681MC female - NYDB63609 17 43586397 43655331 68935 Loss 1 0.888243 10 7659 chas 0 - 0 - 0 - --- 10 90.1 Loss BS ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400138LA female - FISX28606 17 43586397 43655331 68935 Loss 1 0.886264 10 7659 chas 0 - 0 - 0 - --- 10 90.13 Loss "BS,GTC" ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400677HD male - UAZI16039 17 43586397 43655331 68935 Loss 1 0.923327 10 7659 chas 0 - 0 - 0 - --- 10 90.13 Loss "BS,GTC" ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400625FT male - DWHI65488 17 43586397 43655331 68935 Loss 1 0.916456 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400135DR male - KMMD77027 17 43586397 43655331 68935 Loss 1 0.901992 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400783MJ male - QIUJ19845 17 43586397 43655331 68935 Loss 1 0.907383 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401853WR male - YAZD71442 17 43586397 43655331 68935 Loss 1 0.906952 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401859GS male - VUFI80076 17 43586397 43655331 68935 Loss 1 0.900927 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 402001SR male - TLUO25428 17 43586397 43655331 68935 Loss 1 0.908409 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401836SI female - NLWZ33045 17 43586397 43655331 68935 Loss 1 0.917556 10 7659 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 17q21.31 - LRRC37A4 1 LRRC37A4 1 - "22866#1%""17q21.3 recurrent microdeletion syndrome"":577740" "68935(2|Stefansson(2005),Kidd(2008))" "68935(40|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Kidd(2008),Pinto(2007),Tuzun(2005),Park(2010),McCarroll(2008),Zogopoulos(2007))" - 100 10 - 0 "68935(126|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Perry(2008b),Pinto(2011),Park(2010),Ju(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401993HM female - RTCT86718 11 89474818 89543740 68923 Loss 1 0.904228 20 3627 chas 20.34 Loss 34.16 Loss 0 - LossLoss- 10 NA NA NA "ChAS,IPN,NXS" 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400201PK male research_filter LNYN65073 11 89474818 89543740 68923 Loss 1 0.897005 20 3627 chas 0 - 0 - 0 - --- 10 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401924ST male - QCLE90373 11 89474818 89543740 68923 Loss 1 0.912016 20 3627 chas 0 - 0 - 0 - --- 10 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401053MF female - HXWA61262 11 89474818 89543740 68923 Loss 1 0.89384 20 3627 chas 0 - 0 - 0 - --- 10 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401438HT male - THNQ55263 11 89474818 89543740 68923 Loss 1 0.892402 20 3627 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400960TN female - TAVH54072 11 89474818 89543740 68923 Loss 1 0.893731 20 3627 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "68923(10|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 9 - 0 "68923(27|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400948EV female - UECJ73760 5 32102718 32171619 68902 Gain 3 0.895249 66 1060 chas 74.58 Gain 69.64 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "68902(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 43 - 0 "68902(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" JAVP94180 9 5721091 5789971 68881 Loss 1 0.907573 64 1093 chas 95.84 Loss 97.8 Loss 100 Loss LossLossLoss 36 NA NA NA "ChAS,IPN,NXS,PTK" 9p24.1 - "KIAA1432,ERMP1" 2 "KIAA1432,ERMP1" 2 - - - "1530(2|Conrad(2009),Matsuzaki(2009))" 175(1|Matsuzaki(2009)) - 36 - 0 "47824(4|Kidd(2008),Durbin(2010),Conrad(2009))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" LHRU87236 X 89456885 89525747 68863 Loss 1 0.890783 21 3443 chas 0 - 0 - 0 - --- 17 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 100 17 - 0 "68863(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 401038LN female - DOUQ66820 7 142828724 142897485 68762 Loss 1 0.919371 82 848 chas 91.62 Loss 95.82 Loss 95.82 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "54634(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "68762(10|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" RTCT86718 Y 28355341 28423925 68585 Gain 2 0.858398 113 612 chas 81.86 Gain 0 - 0 - Gain-- 36 NA NA NA "ChAS,IPN" Yq11.23 - - 0 - 0 - - - 68585(1|McCarroll(2008)) - 100 36 - 0 "68585(8|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" RAQB29487 4 89171450 89240009 68560 Gain 3 0.902865 72 965 chas 37.12 Gain 79.15 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 4q22.1 - PPM1K 1 PPM1K 1 - - - - 531(1|Perry(2008)) - 40 - 0 "41670(3|Redon(2006),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401746WW male "research_filter, clinical_filter" CKLN80228 X 28253451 28321940 68490 Gain 3 0.901172 34 2075 chas 82.14 Gain 0 - 0 - Gain-- 42 81.98 Gain BS "ChAS,IPN" Xp21.3 - - 0 - 0 - - - 68490(1|Redon(2006)) - - 42 - 0 "68490(5|Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400695PH female research_filter MUBF17546 16 74397974 74466419 68446 Loss 1 0.909272 16 4563 chas 0 - 16.41 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400540BM male research_filter PDTM24300 16 74397974 74466419 68446 Gain 4 0.924156 16 4563 chas 0 - 97.08 Gain 0 - -Gain- 10 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401036WS female research_filter BTMS28214 16 74397974 74466419 68446 Loss 1 0.904705 16 4563 chas 0 - 16.41 Loss 0 - -Loss- 10 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400526DR male research_filter WZBZ52169 16 74397974 74466419 68446 Loss 1 0.894507 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401619BT female - DOLM19463 16 74397974 74466419 68446 Loss 1 0.886388 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401607LL male - LDEW86321 16 74397974 74466419 68446 Loss 1 0.892578 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401786WD male - UFJQ31039 16 74397974 74466419 68446 Loss 1 0.899767 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401551MB male - ZYTR30302 16 74397974 74466419 68446 Loss 1 0.916869 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400356MC female - MGYM61346 16 74397974 74466419 68446 Loss 1 0.889718 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400974PS female - AIKT30285 16 74397974 74466419 68446 Loss 1 0.900016 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400618GC male - THXY16685 16 74397974 74466419 68446 Loss 1 0.889734 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400114GR female - NCJU46793 16 74397974 74466419 68446 Loss 1 0.897276 16 4563 chas 0 - 0 - 0 - --- 10 0 - - ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400061DE female - AJUD27157 16 74397974 74466419 68446 Loss 1 0.889615 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401075MN female - SMGW17663 16 74397974 74466419 68446 Loss 1 0.904594 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400362TV female - FUTH67903 16 74397974 74466419 68446 Loss 1 0.882996 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401874DJ male - YDLH53232 16 74397974 74466419 68446 Loss 1 0.893165 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401691HA male - NFGH10073 16 74397974 74466419 68446 Loss 1 0.893382 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400553PP male - ENVJ37912 16 74397974 74466419 68446 Loss 1 0.88589 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400532MH male - JTMA20495 16 74397974 74466419 68446 Loss 1 0.888477 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 402042BJ male - PCSL59179 16 74397974 74466419 68446 Loss 1 0.88886 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401879HJ male - KAYE11117 16 74397974 74466419 68446 Loss 1 0.89329 16 4563 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "68446(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 93 10 - 0 "68446(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400686BM male - VRMG83827 12 78771331 78839747 68417 Loss 1 0.908506 55 1266 chas 83.9 Loss 88.79 Loss 88.8 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 12q21.2 - - 0 - 0 - - - - - - 44 - 0 "17577(2|Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401769CR male "research_filter, clinical_filter" APCZ69205 1 147947720 148016122 68403 Loss 1 0.870165 15 4885 chas 0 - 0 - 0 - --- 0 0 - - ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "68403(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "68403(92|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400970VE female - GPMX61747 11 55373995 55442305 68311 Gain 3 0.876469 81 853 chas 0 - 0 - 0 - --- 50 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67267(2|Kidd(2008),Korbel(2007))" "68311(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68311(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400079AP female clinical_filter SBZX25020 17 3489145 3557452 68308 Loss 1 0.904834 142 484 chas 14.63 Loss 83.57 Loss 83.79 Loss LossLossLoss 42 75.96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p13.2 - "CTNS,TRPV1,SHPK" 3 "CTNS,TRPV1,SHPK" 3 CTNS - - "52238(3|Itsara(2009),Pang(2010),Shaikh(2009))" 718(1|McKernan(2009)) - 41 - 0 "68308(16|Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400312CR female "research_filter, clinical_filter" ZQHJ50767 11 55374019 55442305 68287 Loss 1 0.85859 80 864 chas 99.98 Loss 17.47 Loss 0 - LossLoss- 50 99.98 Loss "BS,IP6" "ChAS,IPN,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" PSUS84601 11 55374019 55442305 68287 Loss 1 0.857814 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 100 "-,Loss" "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" JXQB25794 11 55374019 55442305 68287 Loss 1 0.857183 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" NQBM70678 11 55374019 55442305 68287 Loss 1 0.870168 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400084DM female "research_filter, clinical_filter" SDOC11846 11 55374019 55442305 68287 Loss 1 0.865364 80 864 chas 99.98 Loss 8.73 Loss 0 - LossLoss- 50 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400325BE male "research_filter, clinical_filter" PAIU48992 11 55374019 55442305 68287 Loss 1 0.859384 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400622SJ female "research_filter, clinical_filter" MECH38806 11 55374019 55442305 68287 Loss 1 0.848429 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" ERUW26412 11 55374019 55442305 68287 Loss 1 0.864475 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" CQAD90614 11 55374019 55442305 68287 Loss 1 0.870652 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401346FJ female "research_filter, clinical_filter" ZBJH32901 11 55374019 55442305 68287 Loss 1 0.860176 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401900RJ female "research_filter, clinical_filter" NOIN63241 11 55374019 55442305 68287 Loss 1 0.878874 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400641WJ female "research_filter, clinical_filter" LLRB50237 11 55374019 55442305 68287 Loss 1 0.861061 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" JFDL89779 11 55374019 55442305 68287 Loss 1 0.868613 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401526WB male "research_filter, clinical_filter" DLYI64271 11 55374019 55442305 68287 Loss 1 0.852768 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401292ER female "research_filter, clinical_filter" MFZZ13533 11 55374019 55442305 68287 Loss 1 0.872349 80 864 chas 99.98 Loss 0 - 0 - Loss-- 50 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400164SS male "research_filter, clinical_filter" UZKE50615 11 55374019 55442305 68287 Gain 3 0.881509 80 864 chas 0 - 100 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400789KV male "research_filter, clinical_filter" OTAJ32230 11 55374019 55442305 68287 Gain 3 0.883364 80 864 chas 0 - 96.26 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400785AK female "research_filter, clinical_filter" ILTL12466 11 55374019 55442305 68287 Gain 3 0.882498 80 864 chas 0 - 18.41 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400124FR male "research_filter, clinical_filter" IJPA28382 11 55374019 55442305 68287 Gain 3 0.892935 80 864 chas 0 - 70.81 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400103BN female "research_filter, clinical_filter" AVGX21589 11 55374019 55442305 68287 Gain 3 0.875952 80 864 chas 0 - 67.11 Gain 0 - -Gain- 50 79.91 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400379BB_1 female "research_filter, clinical_filter" GEZQ95890 11 55374019 55442305 68287 Gain 3 0.880364 80 864 chas 0 - 72.62 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401487FW male "research_filter, clinical_filter" AYKK27829 11 55374019 55442305 68287 Gain 3 0.874897 80 864 chas 0 - 89.57 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400383HL female "research_filter, clinical_filter" CZJD30358 11 55374019 55442305 68287 Gain 3 0.872812 80 864 chas 0 - 18.41 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400063BR female "research_filter, clinical_filter" AYLS39762 11 55374019 55442305 68287 Gain 3 0.88679 80 864 chas 0 - 61.79 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400663MD female "research_filter, clinical_filter" MDAA91863 11 55374019 55442305 68287 Gain 3 0.881037 80 864 chas 0 - 56.21 Gain 0 - -Gain- 50 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400425SL male "research_filter, clinical_filter" XFEU37018 11 55374019 55442305 68287 Gain 3 0.879371 80 864 chas 0 - 88.57 Gain 0 - -Gain- 50 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" HGCG44121 11 55374019 55442305 68287 Gain 3 0.872538 80 864 chas 0 - 96.62 Gain 0 - -Gain- 50 96.39 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" YCEN33630 11 55374019 55442305 68287 Gain 3 0.882322 80 864 chas 0 - 93.03 Gain 0 - -Gain- 50 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400294HD male "research_filter, clinical_filter" ZRXE40373 11 55374019 55442305 68287 Gain 3 0.872733 80 864 chas 0 - 71.24 Gain 0 - -Gain- 50 96.39 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" JTJC66263 11 55374019 55442305 68287 Gain 3 0.875837 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400122PL male "research_filter, clinical_filter" JQGN11749 11 55374019 55442305 68287 Gain 3 0.887748 80 864 chas 0 - 61.79 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400534ME male "research_filter, clinical_filter" LHPN45961 11 55374019 55442305 68287 Gain 3 0.884607 80 864 chas 0 - 96.26 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400603CJ male "research_filter, clinical_filter" IWPA56866 11 55374019 55442305 68287 Gain 3 0.879992 80 864 chas 0 - 99.89 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401700BN_1 female "research_filter, clinical_filter" KXKI34745 11 55374019 55442305 68287 Gain 3 0.878737 80 864 chas 0 - 96.72 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401994BD male "research_filter, clinical_filter" OBJF39540 11 55374019 55442305 68287 Gain 3 0.880777 80 864 chas 0 - 99.99 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401191MI male "research_filter, clinical_filter" OPKR54750 11 55374019 55442305 68287 Gain 3 0.875263 80 864 chas 0 - 72.86 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401822TL female "research_filter, clinical_filter" GHAL32977 11 55374019 55442305 68287 Gain 3 0.883955 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401734PG male "research_filter, clinical_filter" YDKF16445 11 55374019 55442305 68287 Gain 3 0.875229 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401442WR male "research_filter, clinical_filter" EDMQ40540 11 55374019 55442305 68287 Gain 3 0.887583 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401589HP male "research_filter, clinical_filter" GBOO31083 11 55374019 55442305 68287 Gain 3 0.87895 80 864 chas 0 - 99.89 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400282RA female "research_filter, clinical_filter" VKGU19422 11 55374019 55442305 68287 Gain 3 0.873273 80 864 chas 0 - 70.72 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400778SR female "research_filter, clinical_filter" FNSQ39400 11 55374019 55442305 68287 Gain 3 0.872545 80 864 chas 0 - 99.75 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400721DJ male "research_filter, clinical_filter" KGYY91251 11 55374019 55442305 68287 Gain 3 0.872341 80 864 chas 0 - 99.89 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401348RB male "research_filter, clinical_filter" UIPG73190 11 55374019 55442305 68287 Gain 3 0.877679 80 864 chas 0 - 99.89 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401809FU female "research_filter, clinical_filter" YHQC23155 11 55374019 55442305 68287 Gain 3 0.875011 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401906DT female "research_filter, clinical_filter" MKJI51363 11 55374019 55442305 68287 Gain 3 0.872671 80 864 chas 0 - 99.96 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400047DS female "research_filter, clinical_filter" JMWD59875 11 55374019 55442305 68287 Gain 3 0.882007 80 864 chas 0 - 70.55 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 402048WB female "research_filter, clinical_filter" QRNV11451 11 55374019 55442305 68287 Gain 3 0.87311 80 864 chas 0 - 90.96 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401918CA male "research_filter, clinical_filter" MVJH83535 11 55374019 55442305 68287 Gain 3 0.872814 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401771OS male "research_filter, clinical_filter" DQOA73385 11 55374019 55442305 68287 Gain 3 0.879896 80 864 chas 0 - 83.02 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401592NR male "research_filter, clinical_filter" QPLK48897 11 55374019 55442305 68287 Gain 3 0.877023 80 864 chas 0 - 81.22 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401730MS male "research_filter, clinical_filter" HAAE15834 11 55374019 55442305 68287 Gain 3 0.876152 80 864 chas 0 - 99.89 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401899MB male "research_filter, clinical_filter" EZOV24426 11 55374019 55442305 68287 Gain 3 0.886972 80 864 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400454RE male "research_filter, clinical_filter" MQVK42355 11 55374019 55442305 68287 Gain 3 0.885297 80 864 chas 0 - 34.48 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401203MP female "research_filter, clinical_filter" MGJR69521 11 55374019 55442305 68287 Gain 3 0.879906 80 864 chas 0 - 41.55 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401251WN female "research_filter, clinical_filter" KTQJ52506 11 55374019 55442305 68287 Gain 3 0.883027 80 864 chas 0 - 57.36 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400218WK female "research_filter, clinical_filter" HHAT36498 11 55374019 55442305 68287 Gain 3 0.87975 80 864 chas 0 - 61.79 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400574MA female "research_filter, clinical_filter" XIWO60009 11 55374019 55442305 68287 Gain 3 0.877142 80 864 chas 0 - 37.85 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 402074RR female "research_filter, clinical_filter" YZPM76095 11 55374019 55442305 68287 Gain 3 0.885059 80 864 chas 0 - 99.75 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401841OB male "research_filter, clinical_filter" XCWR96625 11 55374019 55442305 68287 Gain 3 0.875485 80 864 chas 0 - 81.29 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400158FB male "research_filter, clinical_filter" CKLN80228 11 55374019 55442305 68287 Gain 3 0.87654 80 864 chas 0 - 0 - 0 - --- 50 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400695PH female clinical_filter AGIM53957 11 55374019 55442305 68287 Gain 3 0.881904 80 864 chas 0 - 0 - 0 - --- 50 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67243(2|Kidd(2008),Korbel(2007))" "68287(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 50 - 0 "68287(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400564SN female clinical_filter GVUJ86973 1 147947839 148016122 68284 Loss 1 0.877642 14 5252 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B,NBPF14" 3 "PPIAL4A,PPIAL4B,NBPF14" 3 - - - "68284(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),Pinto(2007),Tuzun(2005),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "68284(92|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Tuzun(2005),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400914ER male - VZCC67569 2 35932262 36000447 68186 Loss 1 0.877508 37 1894 chas 17.17 Loss 0 - 0 - Loss-- 41 NA NA NA "ChAS,IPN" 2p22.3 - - 0 - 0 - - - "68186(27|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Shaikh(2009))" - - 41 - 0 "68186(109|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400906BR male "research_filter, clinical_filter" PEZC72297 11 55374135 55442305 68171 Loss 1 0.866981 78 885 chas 100 Loss 0 - 0 - Loss-- 48 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67127(2|Kidd(2008),Korbel(2007))" "68171(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68171(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" JPSN96941 11 55374135 55442305 68171 Loss 1 0.864148 78 885 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67127(2|Kidd(2008),Korbel(2007))" "68171(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68171(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" KVGJ18529 Y 24241594 24309739 68146 Loss 0 0.865973 31 2271 chas 100 Loss 0 - 0 - Loss-- 28 NA NA NA "ChAS,IPN" Yq11.223 - "TTTY6,PRY2,PRY,TTTY6B" 4 "TTTY6,PRY2,PRY,TTTY6B" 4 - "68146#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - - - 100 28 - 0 "68146(2|Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401636WR male "research_filter, clinical_filter" RTCT86718 11 55374175 55442305 68131 Loss 1 0.868664 77 896 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67087(2|Kidd(2008),Korbel(2007))" "68131(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68131(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" NXEA90195 11 55374176 55442305 68130 Loss 1 0.857244 76 908 chas 100 Loss 0 - 0 - Loss-- 48 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" KLEB18411 11 55374176 55442305 68130 Loss 1 0.860363 76 908 chas 100 Loss 0 - 0 - Loss-- 48 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" FXTM73808 11 55374176 55442305 68130 Loss 1 0.866294 76 908 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401030GI female "research_filter, clinical_filter" RGHO54100 11 55374176 55442305 68130 Loss 1 0.864366 76 908 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" GNMX63810 11 55374176 55442305 68130 Loss 1 0.863502 76 908 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" FGIX67905 11 55374176 55442305 68130 Loss 1 0.876041 76 908 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401391PJ male "research_filter, clinical_filter" ELWV13238 11 55374176 55442305 68130 Loss 1 0.866602 76 908 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401013GJ male "research_filter, clinical_filter" KRGM31190 11 55374176 55442305 68130 Gain 3 0.87983 76 908 chas 0 - 49.46 Gain 0 - -Gain- 48 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400235MP_1 male "research_filter, clinical_filter" WBPB92916 11 55374176 55442305 68130 Gain 3 0.876103 76 908 chas 0 - 100 Gain 0 - -Gain- 48 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401210PB male "research_filter, clinical_filter" CVYW15790 11 55374176 55442305 68130 Gain 3 0.874987 76 908 chas 0 - 100 Gain 0 - -Gain- 48 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401552BK female "research_filter, clinical_filter" LVBF79370 11 55374176 55442305 68130 Gain 3 0.880251 76 908 chas 0 - 83.31 Gain 0 - -Gain- 48 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401287CF male "research_filter, clinical_filter" NFIQ53983 11 55374176 55442305 68130 Gain 3 0.87481 76 908 chas 0 - 31.89 Gain 0 - -Gain- 48 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401719RL female "research_filter, clinical_filter" QXHS37749 11 55374176 55442305 68130 Gain 3 0.879172 76 908 chas 0 - 99.99 Gain 0 - -Gain- 48 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67086(2|Kidd(2008),Korbel(2007))" "68130(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68130(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401943KA male "research_filter, clinical_filter" TCSA61368 11 55374190 55442305 68116 Loss 1 0.867452 75 920 chas 100 Loss 39.82 Loss 0 - LossLoss- 48 100 Loss "BS,IP6" "ChAS,IPN,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67072(2|Kidd(2008),Korbel(2007))" "68116(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "68116(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" GWRR97762 11 55374190 55442305 68116 Loss 1 0.860049 75 920 chas 100 Loss 0 - 0 - Loss-- 48 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67072(2|Kidd(2008),Korbel(2007))" "68116(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "68116(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" MYLH81171 11 55374190 55442305 68116 Gain 3 0.883634 75 920 chas 0 - 89.54 Gain 0 - -Gain- 48 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67072(2|Kidd(2008),Korbel(2007))" "68116(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "68116(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401972BA male "research_filter, clinical_filter" DUXB26784 11 55374176 55442271 68096 Loss 1 0.866034 75 920 chas 100 Loss 0 - 0 - Loss-- 48 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "67052(2|Kidd(2008),Korbel(2007))" "68096(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "68096(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401519SA female "research_filter, clinical_filter" PDHC59420 Y 22287686 22355769 68084 Loss 0 0.902513 10 7564 chas 99.74 Loss 0 - 0 - Loss-- 10 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "68084#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - "68084(2|Levy(2007),Perry(2008))" - - 10 - 0 "68084(7|Levy(2007),Durbin(2010),Perry(2008))" FALSE TRUE ipn_yes algo_yes NA 401457WK male research_filter VHVH83554 7 142047383 142115392 68010 Loss 1 0.913697 8 9715 chas 0 - 0 - 0 - --- 9 0 - - ChAS 7q34 50001(1|clone) - 0 - 0 - - - "18011(10|de Smith(2007),Ahn(2009),McCarroll(2008),Matsuzaki(2009),Shaikh(2009))" 17198(1|Wang(2008)) 25 9 - 0 "18011(12|Ahn(2009),Wang(2008),Durbin(2010),Kidd(2008),McCarroll(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400198MD male - YOPA81411 2 19460666 19528615 67950 Loss 1 0.922504 63 1095 chas 86.98 Loss 91.85 Loss 91.85 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 2p24.1 - - 0 - 0 - - - - - - 55 - 0 "37430(3|Kidd(2008),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" GVAB34760 5 175570678 175638617 67940 Gain 3 0.917359 44 1580 chas 100 Gain 100 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 5q35.2 - LOC643201 1 LOC643201 1 - "67940#1%""Sotos syndrome"":2326144" - "67940(24|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Cooper(2008),Shaikh(2009),McCarroll(2008))" - 32 51 - 0 "67940(87|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400453LN male research_filter APGE11753 5 180374484 180442388 67905 Gain 3 0.908139 43 1616 chas 81.73 Gain 70.02 Gain 0 - GainGain- 25 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "67905(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 11 24 - 0 "67905(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401017SC female research_filter DBFY56089 5 180374484 180442387 67904 Gain 3 0.89104 42 1656 chas 0 - 61.77 Gain 0 - -Gain- 24 58.01 Gain IP6 "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "67904(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 11 24 - 0 "67904(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400458LS female research_filter TZAD89276 5 32102718 32170613 67896 Gain 3 0.895136 64 1077 chas 41.69 Gain 41.69 Gain 0 - GainGain- 42 75.67 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67896(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67896(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401185LE female "research_filter, clinical_filter" XGGI83581 5 32102718 32170613 67896 Gain 3 0.885386 64 1077 chas 41.69 Gain 75.77 Gain 0 - GainGain- 42 75.67 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67896(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67896(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400486LS female "research_filter, clinical_filter" REUG17486 5 32102718 32170613 67896 Gain 3 0.893047 64 1077 chas 58.3 Gain 66.58 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67896(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67896(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" YDHD10968 5 32102718 32170613 67896 Gain 3 0.907665 64 1077 chas 75.68 Gain 91.07 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67896(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67896(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401355CD male "research_filter, clinical_filter" IRJE88693 5 32102719 32170613 67895 Gain 3 0.902508 63 1095 chas 58.3 Gain 53.05 Gain 0 - GainGain- 42 75.67 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67895(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67895(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" IJLN67055 5 32102719 32170613 67895 Gain 3 0.898283 63 1095 chas 67.56 Gain 91.07 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67895(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 42 - 0 "67895(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400982BS female "research_filter, clinical_filter" EEVS84165 Y 25555639 25623520 67882 Gain 2 0.849006 84 817 chas 21.3 Gain 0 - 0 - Gain-- 25 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "67882#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "67882(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 25 - 0 "67882(4|McCarroll(2008),Durbin(2010),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 401039PA male "research_filter, clinical_filter" NZSQ74406 7 17120460 17188327 67868 Loss 1 0.926049 56 1233 chas 91.25 Loss 95.51 Loss 95.52 Loss LossLossLoss 52 91.25 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.1 - - 0 - 0 - - - "67868(4|Pinto(2007),Redon(2006),Perry(2008),Zogopoulos(2007))" - - 52 - 0 "67868(11|Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" JSXF59945 6 29868254 29936041 67788 Loss 1 0.941763 30 2337 chas 46.31 Loss 46.4 Loss 82.67 Loss LossLossLoss 50 40.22 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "67788(57|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 27 50 - 0 "67788(345|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401863BD_1 female "research_filter, clinical_filter" XBAT84080 16 74384245 74452023 67779 Gain 4 0.950039 16 4518 chas 0 - 86.42 Gain 0 - -Gain- 9 82.22 Gain BS "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "67779(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 9 - 0 "67779(89|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400186WC female research_filter UAVX81306 16 74384245 74452023 67779 Loss 1 0.886961 16 4518 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "67779(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 9 - 0 "67779(89|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400643LD male - IENJ56420 16 74384245 74452023 67779 Loss 1 0.887018 16 4518 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "67779(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 9 - 0 "67779(89|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401538NS female - CMHA46888 5 32102839 32170613 67775 Gain 3 0.896561 62 1111 chas 75.82 Gain 87.9 Gain 0 - GainGain- 41 75.8 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "67775(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 41 - 0 "67775(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" BKFI83925 7 38319296 38387020 67725 Gain 3 0.898736 92 744 chas 0 - 51.17 Gain 99.85 Gain #NAME? 109 NA NA NA "ChAS,NXS,PTK" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "67725(26|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 109 - 0 "67725(63|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401990PR male "research_filter, clinical_filter" DHFF12670 7 38319296 38387020 67725 Loss 1 0.876591 92 744 chas 0 - 23.26 Loss 87.78 Loss #NAME? 109 NA NA NA "ChAS,NXS,PTK" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "67725(26|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 109 - 0 "67725(63|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401252AE male "research_filter, clinical_filter" JFDL89779 7 38319296 38387020 67725 Loss 1 0.866343 92 744 chas 0 - 17.37 Loss 0 - -Loss- 109 NA NA NA "ChAS,NXS" 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "67725(26|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 109 - 0 "67725(63|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401526WB male "research_filter, clinical_filter" EJVQ96131 7 38319296 38387020 67725 Loss 1 0.863593 92 744 chas 0 - 0 - 0 - --- 109 NA NA NA ChAS 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "67725(26|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 109 - 0 "67725(63|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400738WM female clinical_filter KKFR54086 7 38319296 38387020 67725 Loss 1 0.858904 92 744 chas 0 - 0 - 0 - --- 109 NA NA NA ChAS 7p14.1 - LOC100506776 1 LOC100506776 1 - - - "67725(26|Sebat(2004),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Kidd(2008),Conrad(2009),Pinto(2007),Park(2010),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 109 - 0 "67725(63|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Kim(2009),De(Smith_2007),Wang(2007),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401443JK male clinical_filter ZRKC95930 7 142820793 142888396 67604 Loss 1 0.916848 80 855 chas 89.41 Loss 94.65 Loss 94.66 Loss LossLossLoss 32 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "62565(8|de Smith(2007),Kidd(2008),Matsuzaki(2009),Shaikh(2009),Conrad(2009))" - - 32 - 0 "67604(12|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" YWSA20061 12 52502658 52570232 67575 Gain 3 0.901143 67 1023 chas 13.99 Gain 98.03 Gain 0 - GainGain- 71 75.43 Gain "BS,GTC" "ChAS,IPN,NXS" 12q13.13 - KRT80 1 KRT80 1 - - - "41442(3|McCarroll(2005),Wang(2007),Conrad(2009))" - 7 70 - 0 "67575(10|Conrad(2009),Wong(2007),Jakobsson(2008),Wang(2007),Pinto(2011),Redon(2006),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" TASV63603 16 82987872 83055419 67548 Loss 1 0.933139 108 631 chas 86.98 Loss 92.17 Loss 92.16 Loss LossLossLoss 55 86.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16q23.3 - CDH13 1 - 0 - - - - 776(1|Conrad(2009)) - 55 - 0 "66443(14|Conrad(2009),Banerjee(2011),Durbin(2010),Shaikh(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400255CD male "research_filter, clinical_filter" EATF12348 5 180374898 180442388 67491 Gain 3 0.907462 41 1687 chas 82.23 Gain 67.77 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "67491(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 12 22 - 0 "67491(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400352CA female research_filter APCZ69205 5 180374898 180442387 67490 Gain 3 0.891447 40 1730 chas 0 - 93.11 Gain 0 - -Gain- 22 0 - - "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "67490(26|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 12 22 - 0 "67490(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400970VE female research_filter IENJ56420 15 102361685 102429112 67428 Gain 3 0.880236 141 481 chas 10.4 Gain 60.43 Gain 60.43 Gain GainGainGain 35 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - GPCRLTM7 1 GPCRLTM7 1 - "67428#1%""15q26 overgrowth syndrome"":3163423" - "67428(11|Conrad(2009),Perry(2008),Matsuzaki(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 41 35 - 0 "67428(18|Conrad(2009),Redon(2006),Perry(2008),Alkan(2009),Durbin(2010),Wilson(2010),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401538NS female "research_filter, clinical_filter" BHQW11777 6 29091576 29158984 67409 Gain 3 0.887179 52 1321 chas 91.38 Gain 100 Gain 0 - GainGain- 9 NA NA NA "ChAS,IPN,NXS" 6p22.1 - OR2J2 1 OR2J2 1 - - - "67409(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 16 9 - 0 "67409(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401027KW male "research_filter, clinical_filter" GVYY53861 6 29091576 29158984 67409 Loss 1 0.91767 52 1321 chas 87.02 Loss 97.67 Loss 99.97 Loss LossLossLoss 9 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - OR2J2 1 OR2J2 1 - - - "67409(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 16 9 - 0 "67409(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401214BJ male "research_filter, clinical_filter" ACWT82545 6 29091576 29158984 67409 Loss 1 0.911942 52 1321 chas 87.02 Loss 86.92 Loss 89.2 Loss LossLossLoss 9 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - OR2J2 1 OR2J2 1 - - - "67409(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 16 9 - 0 "67409(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" RIAA15120 4 36520612 36587952 67341 Loss 1 0.903687 45 1530 chas 100 Loss 100 Loss 100 Loss LossLossLoss 57 NA NA NA "ChAS,IPN,NXS,PTK" 4p14 - - 0 - 0 - - 15275(1|Ahn(2009)) 67115(1|Park(2010)) - - 57 - 0 "67115(3|Park(2010),Ahn(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" VAOW46427 14 27532293 27599633 67341 Loss 1 0.911506 56 1224 chas 91.81 Loss 81.44 Loss 98.99 Loss LossLossLoss 48 88.31 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q12 - - 0 - 0 - - - - - - 48 - 0 "67341(5|Wong(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" ORNW53006 17 4778159 4845436 67278 Gain 3 0.906802 59 1159 chas 96.21 Gain 98.06 Gain 0 - GainGain- 28 99.65 - BS "ChAS,IPN,NXS" 17p13.2 - "MINK1,RNF167,C17orf107,GP1BA,CHRNE,SLC25A11" 6 "MINK1,RNF167,C17orf107,GP1BA,CHRNE,SLC25A11" 6 "GP1BA,CHRNE" - - "21883(7|Pang(2010),Kidd(2008))" 745(1|Kim(2009)) - 28 - 0 "67278(11|Kidd(2010),Wong(2007),Teague(2010),Pang(2010),Kidd(2008),Pinto(2011),Kim(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400494ML female "research_filter, clinical_filter" IAQN76409 X 132003798 132071067 67270 Loss 1 0.920824 52 1319 chas 88.64 Loss 0 - 0 - Loss-- 34 NA NA NA "ChAS,IPN" Xq26.2 - HS6ST2 1 - 0 - - - - - - 34 - 0 31337(1|Kidd(2008)) TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" YWSA20061 22 18937513 19004731 67219 Gain 4 0.931912 30 2317 chas 99.04 Gain 62.74 Gain 62.74 Gain GainGainGain 47 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q11.21 - DGCR5 1 DGCR5 1 - "67219#2%""22q11 deletion syndrome (Velocardiofacial / DiGeorge syndrome)"":3790121,""22q11 duplication syndrome"":3790121" - "67219(24|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 933(1|Conrad(2009)) 69 47 - 0 "67219(68|Conrad(2009),Korbel(2007),Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400101EH female research_filter JYCC50302 16 35215684 35282898 67215 Loss 1 0.942723 9 8401 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 16p11.1 - - 0 - 0 - - - "67215(8|Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Shaikh(2009))" - - 2 - 0 "67215(23|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Kidd(2008),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401778CB male - IWRE15730 19 8938654 9005863 67210 Gain 3 0.900197 100 678 chas 84.07 Gain 83.91 Gain 0 - GainGain- 73 NA NA NA "ChAS,IPN,NXS" 19p13.2 - "MBD3L1,MUC16" 2 "MBD3L1,MUC16" 2 - - - "12204(3|Kidd(2008),Matsuzaki(2009))" 143(1|Bentley(2008)) - 72 - 0 "67210(32|Wong(2007),Redon(2006),Kidd(2008),Durbin(2010),Bentley(2008),Locke(2006),Perry(2008b),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 402054BD male "research_filter, clinical_filter" XREB60973 10 105150562 105217756 67195 Gain 3 0.892109 72 946 chas 61.09 Gain 99.39 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 10q24.33 - "MIR1307,PDCD11,USMG5,CALHM1,CALHM2" 5 "MIR1307,PDCD11,USMG5,CALHM1,CALHM2" 5 - - - - - - 40 - 0 "54231(4|Kidd(2008),Conrad(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" DQHB62647 16 35215706 35282898 67193 Loss 1 0.923882 8 9599 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS 16p11.1 - - 0 - 0 - - - "67193(8|Conrad(2009),Ahn(2009),Ju(2010),McKernan(2009),Cooper(2008),Shaikh(2009))" - - 2 - 0 "67193(23|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),McKernan(2009),Durbin(2010),Kidd(2008),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401732HW male - OSRU53198 X 154672434 154739500 67067 Gain 2 0.923833 12 6097 chas 36.75 Gain 0 - 0 - Gain-- 6 0 - - "ChAS,IPN" Xq28 - "F8A1,F8A3,F8A2,H2AFB3,H2AFB2,H2AFB1,MIR1184-1,MIR1184-2,MIR1184-3,LOC100507404,TMLHE" 11 "F8A1,F8A3,F8A2,H2AFB3,H2AFB2,H2AFB1,MIR1184-1,MIR1184-2,MIR1184-3,LOC100507404,TMLHE" 11 - - 67067(2|Kidd(2008)) "67067(2|Wang(2007),Levy(2007))" - 75 6 - 0 "67067(9|Wang(2007),Kidd(2010b),Levy(2007),Durbin(2010),Kidd(2008),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 400854SG male research_filter JQLR11985 3 46793072 46860083 67012 Loss 1 0.892069 52 1313 chas 71.29 Loss 93.25 Loss 93.25 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "67012(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 45 - 0 "67012(106|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400800MW female "research_filter, clinical_filter" IZPX82976 11 55393677 55460670 66994 Gain 3 0.878552 80 848 chas 0 - 87.88 Gain 0 - -Gain- 41 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "65950(2|Kidd(2008),Korbel(2007))" "66994(74|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 41 - 0 "66994(741|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401693RC male "research_filter, clinical_filter" MLXC26947 20 41228333 41295295 66963 Loss 1 0.900497 121 558 chas 88.91 Loss 87.25 Loss 100 Loss LossLossLoss 100 NA NA NA "ChAS,IPN,NXS,PTK" 20q12 - PTPRT 1 - 0 - - - "50034(8|Wang(2007),Pinto(2007),Redon(2006),Matsuzaki(2009),Shaikh(2009))" - - 100 - 0 "66963(18|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401977ES male "research_filter, clinical_filter" GUYS21436 17 44212824 44279760 66937 Loss 1 0.866888 65 1045 chas 0 - 0 - 0 - --- 65 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 66937(1|Kidd(2008)) "66937(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 65 - 0 "66937(220|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400582WS female clinical_filter VUUO47049 17 44225440 44292319 66880 Loss 1 0.857449 53 1286 chas 0 - 0 - 0 - --- 64 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 66880(1|Kidd(2008)) "66880(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) 10 64 - 0 "66880(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400533BB female clinical_filter FRXS36515 2 242025622 242092483 66862 Gain 3 0.902495 60 1133 chas 99.03 Gain 99.32 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 2q37.3 - "SNED1,PPP1R7,MTERFD2,PASK" 4 "SNED1,PPP1R7,MTERFD2,PASK" 4 - "66862#1%""2q37 monosomy"":3147784" - - "910(7|Matsuzaki(2009),Bentley(2008))" - 52 - 0 "5085(10|Mills(2006),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400769SL female "research_filter, clinical_filter" PTKC28903 5 46246500 46313261 66762 Loss 1 0.896322 12 6069 chas 0 - 60.05 Loss 0 - -Loss- 15 NA NA NA "ChAS,NXS" 5p11 - - 0 - 0 - - - "66762(15|Conrad(2009),Korbel(2007),Matsuzaki(2009),Ju(2010),Itsara(2009),McKernan(2009),McCarroll(2008),Shaikh(2009))" 626(4|Matsuzaki(2009)) - 15 - 0 "66762(41|Teague(2010),Korbel(2007),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400442FE female research_filter VBEF49630 11 37768001 37834730 66730 Gain 3 0.899446 48 1419 chas 84.78 Gain 99.98 Gain 0 - GainGain- 37 NA NA NA "ChAS,IPN,NXS" 11p12 - - 0 - 0 - - - 41210(1|Shaikh(2009)) - - 37 - 0 "66730(13|Itsara(2009),Teague(2010),Wong(2007),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400022WA female research_filter EATF12348 3 106791470 106858133 66664 Loss 1 0.916712 52 1307 chas 100 Loss 82.87 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 3q13.12 - LOC100302640 1 LOC100302640 1 - - - 1568(1|Park(2010)) "265(3|Wang(2008),Levy(2007),Wheeler(2008))" 6 43 - 0 "42682(12|Wang(2008),Kidd(2008),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400352CA female "research_filter, clinical_filter" TRVK84587 1 2501338 2567987 66650 Gain 3 0.90524 44 1550 chas 76.25 Gain 76.73 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 1p36.32 - "FAM213B,MMEL1" 2 "FAM213B,MMEL1" 2 - "66650#1%""1p36 microdeletion syndrome"":5408761" 36734(2|Kidd(2008)) 66650(2|Jakobsson(2008)) "836(2|Conrad(2009),Bentley(2008))" 4 22 - 0 "66650(32|Conrad(2009),Wong(2007),Jakobsson(2008),Durbin(2010),Bentley(2008),Kidd(2008),Wilson(2010),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_yes algo_yes NA 401288LD male research_filter QPLK48897 6 78975106 79041633 66528 Loss 1 0.90014 21 3326 chas 90.31 Loss 0 - 0 - Loss-- 101 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "66528(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 101 - 0 "66528(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401730MS male research_filter ZKED26020 6 78975106 79041633 66528 Loss 1 0.88398 21 3326 chas 90.31 Loss 0 - 0 - Loss-- 101 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "66528(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 101 - 0 "66528(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401652HL female research_filter OTAJ32230 X 89449156 89515660 66505 Loss 1 0.888968 20 3500 chas 0 - 0 - 0 - --- 17 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 100 17 - 0 "61145(3|Kidd(2008),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400785AK female - UCQK65306 5 177166127 177232592 66466 Gain 4 0.9274 13 5538 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "66466#1%""Sotos syndrome"":2326144" - "66466(10|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 6 - 0 "66466(31|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401196CR male - XMVT70735 4 68346 134807 66462 Gain 3 0.914289 144 464 chas 79.42 Gain 89.91 Gain 100 Gain GainGainGain 37 79.36 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 4p16.3 - "ZNF718,ZNF595" 2 ZNF595 1 - "66462#1%""Wolf-Hirschhorn Syndrome"":2073670" - "66462(9|Wang(2007),Ahn(2009),de Smith(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 37 - 0 "66462(21|Wang(2007),Ahn(2009),Perry(2008),Kidd(2008),Wang(2008),McKernan(2009),Durbin(2010),Itsara(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401873BK male "research_filter, clinical_filter" QIUJ19845 4 68346 134807 66462 Gain 3 0.891808 144 464 chas 75.57 Gain 100 Gain 100 Gain GainGainGain 37 NA NA NA "ChAS,IPN,NXS,PTK" 4p16.3 - "ZNF718,ZNF595" 2 ZNF595 1 - "66462#1%""Wolf-Hirschhorn Syndrome"":2073670" - "66462(9|Wang(2007),Ahn(2009),de Smith(2007),McKernan(2009),Kidd(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 37 - 0 "66462(21|Wang(2007),Ahn(2009),Perry(2008),Kidd(2008),Wang(2008),McKernan(2009),Durbin(2010),Itsara(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401853WR male "research_filter, clinical_filter" SKLJ58672 5 177166127 177232531 66405 Gain 4 0.927882 12 6036 chas 0 - 0 - 0 - --- 6 7.5 Gain BS ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "66405#1%""Sotos syndrome"":2326144" - "66405(10|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 6 - 0 "66405(31|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_yes 400639RP male - NVDU55912 7 142427234 142493638 66405 Loss 1 0.86248 104 644 chas 0 - 0 - 0 - --- 73 NA NA NA ChAS 7q34 - "PRSS1,TRY6,PRSS2" 3 "PRSS1,TRY6,PRSS2" 3 "PRSS1,PRSS2" - - "66405(14|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" - 60 72 - 0 "66405(53|Wang(2007),Wong(2007),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no NA 401307VR male clinical_filter UXJM82913 16 2663367 2729765 66399 Gain 3 0.895472 32 2141 chas 55.52 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 16p13.3 - "FLJ42627,ERVK13-1,LOC652276" 3 "FLJ42627,ERVK13-1,LOC652276" 3 - - - "66399(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 100 18 - 0 "66399(56|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401359HF male research_filter VPWL90389 16 2663367 2729765 66399 Gain 3 0.899935 32 2141 chas 0 - 0 - 0 - --- 18 34.5 Gain "BS,IP6" ChAS 16p13.3 - "FLJ42627,ERVK13-1,LOC652276" 3 "FLJ42627,ERVK13-1,LOC652276" 3 - - - "66399(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 100 18 - 0 "66399(56|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 401912HD male - TPDE39419 16 2663367 2729765 66399 Gain 3 0.896846 32 2141 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 16p13.3 - "FLJ42627,ERVK13-1,LOC652276" 3 "FLJ42627,ERVK13-1,LOC652276" 3 - - - "66399(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 100 18 - 0 "66399(56|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401369GR male - LNDH30137 16 2663367 2729765 66399 Gain 3 0.895992 32 2141 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 16p13.3 - "FLJ42627,ERVK13-1,LOC652276" 3 "FLJ42627,ERVK13-1,LOC652276" 3 - - - "66399(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 100 18 - 0 "66399(56|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401808PS male - PYWH93436 6 78975335 79041720 66386 Loss 1 0.89844 21 3319 chas 90.15 Loss 0 - 0 - Loss-- 102 90.16 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "66386(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 102 - 0 "66386(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400270BD female research_filter XMVT70735 11 9827021 9893381 66361 Loss 1 0.926148 100 670 chas 100 Loss 96.68 Loss 99.54 Loss LossLossLoss 48 93.49 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p15.4 - "LOC283104,SBF2" 2 "LOC283104,SBF2" 2 SBF2 - - - - - 48 - 0 66361(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 401873BK male "research_filter, clinical_filter" TABQ91013 6 3157163 3223513 66351 Gain 3 0.90266 74 908 chas 91.4 Gain 100 Gain 0 - GainGain- 34 NA NA NA "ChAS,IPN,NXS" 6p25.2 - "TUBB2A,LOC100507194" 2 "TUBB2A,LOC100507194" 2 - - - "29459(15|Wang(2008),Ahn(2009),McKernan(2009),Matsuzaki(2009))" "1634(13|Conrad(2009),McKernan(2009),Matsuzaki(2009),Ju(2010))" 5 34 - 0 "50921(34|Teague(2010),Ahn(2009),Ju(2010),Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wang(2008))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" RVIS81666 11 55376010 55442305 66296 Loss 1 0.867197 74 908 chas 100 Loss 0 - 0 - Loss-- 46 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "65252(2|Kidd(2008),Korbel(2007))" "66296(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 46 - 0 "66296(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" PQCI84759 11 55376010 55442305 66296 Loss 1 0.862375 74 908 chas 100 Loss 0 - 0 - Loss-- 46 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "65252(2|Kidd(2008),Korbel(2007))" "66296(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 46 - 0 "66296(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" GQSZ37539 X 89470120 89536405 66286 Loss 1 0.843267 24 2882 chas 0 - 0 - 0 - --- 24 0 - - ChAS Xq21.31 - - 0 - 0 - - - - - 98 24 - 0 "66286(4|Kidd(2008),Redon(2006),Durbin(2010),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400455SJ female - XUEP99389 4 91668545 91734822 66278 Gain 3 0.88591 78 860 chas 33.81 Gain 54.19 Gain 0 - GainGain- 47 99.73 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q22.1 - FAM190A 1 FAM190A 1 - - - - - - 47 - 0 "66278(2|Iafrate(2004),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" ZRXE40373 Y 19946810 20013065 66256 Gain 2 0.869253 288 230 chas 100 Gain 0 - 0 - Gain-- 31 0 - - "ChAS,IPN" Yq11.222 - "CDY2A,CDY2B" 2 "CDY2A,CDY2B" 2 - "48240#1%""AZFb+AZFc"":7829005" - 19254(5|Matsuzaki(2009)) - 100 31 - 0 "66256(3|Locke(2006),Perry(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400730SH male "research_filter, clinical_filter" WQLF68770 13 64321539 64387677 66139 Gain 3 0.891572 48 1407 chas 76.37 Gain 98.72 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 13q21.31 - - 0 - 0 - - 9475(1|Kidd(2008)) "66139(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 83 42 - 0 "66139(9|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401437MJ male research_filter IDVO19613 1 147929115 147995251 66137 Loss 1 0.863628 14 5087 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B,FLJ39739" 3 "PPIAL4A,PPIAL4B,FLJ39739" 3 - - - "66137(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 1 - 0 "66137(87|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401434VN female - HXWA61262 17 44213637 44279760 66124 Loss 1 0.86523 63 1066 chas 99.31 Loss 0 - 0 - Loss-- 64 100 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 66124(1|Kidd(2008)) "66124(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "66124(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401438HT male "research_filter, clinical_filter" ISXJ62958 X 94313721 94379837 66117 Gain 2 0.946028 44 1537 chas 100 Gain 0 - 0 - Gain-- 50 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq21.33 - - 0 - 0 - - - - - - 50 - 0 "65805(3|Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401956DQ male research_filter IORF34772 10 87997562 88063648 66087 Loss 1 0.911014 92 726 chas 99.98 Loss 98.25 Loss 98.25 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 10q23.2 - "GRID1,MIR346" 2 MIR346 1 - - - - - - 35 GRID1#asd_candidate 1 "66087(7|Korbel(2007),Durbin(2010),Shaikh(2009),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" VTLK66107 6 78969092 79035172 66081 Loss 0 0.979184 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401153HS female research_filter FPHR45460 6 78969092 79035172 66081 Loss 0 0.976003 24 2873 chas 99.98 Loss 100 Loss 84.36 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401104DM female research_filter YMBI36841 6 78969092 79035172 66081 Loss 0 0.982578 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401321CE female research_filter WHSN55625 6 78969092 79035172 66081 Loss 0 0.978596 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401354KM male research_filter GPXE42967 6 78969092 79035172 66081 Loss 0 0.981603 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400006DK female research_filter TQFG68171 6 78969092 79035172 66081 Loss 0 0.98345 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400265LK male research_filter UYPJ72832 6 78969092 79035172 66081 Loss 0 0.978299 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401240ML female research_filter WUVU37744 6 78969092 79035172 66081 Loss 0 0.9728 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401763SG male research_filter JUBF84215 6 78969092 79035172 66081 Loss 0 0.977811 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400066MA female research_filter RDPM47345 6 78969092 79035172 66081 Loss 0 0.971122 24 2873 chas 99.98 Loss 100 Loss 65.93 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400554WB male research_filter INUW24322 6 78969092 79035172 66081 Loss 0 0.973838 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400110MD male research_filter HOIC14625 6 78969092 79035172 66081 Loss 0 0.974511 24 2873 chas 99.98 Loss 100 Loss 84.36 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400619MP male research_filter GPMX61747 6 78969092 79035172 66081 Loss 0 0.97057 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400079AP female research_filter UYMD11362 6 78969092 79035172 66081 Loss 0 0.973306 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400030WD female research_filter SLNP19984 6 78969092 79035172 66081 Loss 0 0.982728 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401152MV female research_filter MUIH56067 6 78969092 79035172 66081 Loss 0 0.987142 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400930MK female research_filter NJBJ54022 6 78969092 79035172 66081 Loss 0 0.983813 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401066MM female research_filter IJCV29609 6 78969092 79035172 66081 Loss 0 0.969211 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401263HS female research_filter HARD47518 6 78969092 79035172 66081 Loss 0 0.982905 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401397WN female research_filter TABQ91013 6 78969092 79035172 66081 Loss 0 0.979893 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400934LA female research_filter ERKP22336 6 78969092 79035172 66081 Loss 0 0.970608 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401726LW female research_filter FYVR80369 6 78969092 79035172 66081 Loss 0 0.980553 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401448BJ male research_filter NDHJ32269 6 78969092 79035172 66081 Loss 0 0.975981 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402008MC female research_filter RPJZ72910 6 78969092 79035172 66081 Loss 0 0.978614 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401395OP male research_filter IUXY17884 6 78969092 79035172 66081 Loss 0 0.97604 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401238QR male research_filter KGYY91251 6 78969092 79035172 66081 Loss 0 0.977235 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401348RB male research_filter XQAG43010 6 78969092 79035172 66081 Loss 0 0.973015 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400953MR female research_filter YHQC23155 6 78969092 79035172 66081 Loss 0 0.980196 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401906DT female research_filter NUMT67226 6 78969092 79035172 66081 Loss 0 0.970855 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401079HJ female research_filter SXNO44692 6 78969092 79035172 66081 Loss 0 0.980316 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401949MN male research_filter SAHS24305 6 78969092 79035172 66081 Loss 0 0.966637 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401968HL female research_filter EJVQ96131 6 78969092 79035172 66081 Loss 0 0.984028 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400738WM female research_filter YEVU55281 6 78969092 79035172 66081 Loss 0 0.968097 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401453OL male research_filter KQIO31508 6 78969092 79035172 66081 Loss 0 0.971965 24 2873 chas 99.98 Loss 100 Loss 65.93 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400507VD male research_filter PTGD86385 6 78969092 79035172 66081 Loss 0 0.970724 24 2873 chas 99.98 Loss 100 Loss 65.93 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401262RR male research_filter PCSL59179 6 78969092 79035172 66081 Loss 0 0.971738 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401879HJ male research_filter FIIC23299 6 78969092 79035172 66081 Loss 0 0.969943 24 2873 chas 99.98 Loss 100 Loss 73.2 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400843FL female research_filter YKER13969 6 78969092 79035172 66081 Loss 0 0.980663 24 2873 chas 99.98 Loss 100 Loss 93.13 Loss LossLossLoss 113 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401372RR male research_filter DZVA59681 6 78969092 79035172 66081 Loss 1 0.890301 24 2873 chas 0 - 0 - 0 - --- 113 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "66081(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66081(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400606HW male - UBKP24592 6 78969092 79035161 66070 Gain 3 0.893678 23 3003 chas 0 - 0 - 0 - --- 112 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "66070(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "66070(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401513KC male - UXJM82913 7 142427572 142493637 66066 Loss 1 0.887443 99 674 chas 0 - 13.86 Loss 21.47 Loss #NAME? 71 NA NA NA "ChAS,NXS,PTK" 7q34 - "PRSS1,TRY6,PRSS2" 3 "PRSS1,TRY6,PRSS2" 3 "PRSS1,PRSS2" - - "66066(14|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Pinto(2007),Park(2010),Kim(2009),McCarroll(2008))" - 60 71 - 0 "66066(53|Wang(2007),Wong(2007),Itsara(2009),Campbell(2011),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Perry(2008b),Pinto(2011),Kim(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401359HF male "research_filter, clinical_filter" HDQN23240 X 101624580 101690621 66042 Loss 1 0.889505 8 9434 chas 0 - 0 - 0 - --- 4 0 - - ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 4 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400136DM female - LOOD16085 X 101624580 101690621 66042 Loss 1 0.874028 8 9434 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS Xq22.1 - "NXF2B,NXF2" 2 "NXF2B,NXF2" 2 - - - - - 100 4 - 0 47679(2|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400376SJ female - TFVC48426 18 48889160 48955201 66042 Gain 3 0.897844 49 1375 chas 34.24 Gain 91.24 Gain 0 - GainGain- 46 94.38 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 18q21.2 - LOC100287225 1 LOC100287225 1 - - - 33875(1|Kidd(2008)) 468(1|McKernan(2009)) - 46 - 0 "33875(3|Kidd(2008),Wilson(2010),McKernan(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400501SJ male research_filter JAVP94180 11 24075930 24141934 66005 Loss 1 0.891509 54 1245 chas 85.97 Loss 92.98 Loss 92.97 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 11p14.3 - - 0 - 0 - - 995(1|Ahn(2009)) "45463(2|Park(2010),McKernan(2009))" - - 44 - 0 "66005(7|Itsara(2009),Park(2010),Ahn(2009),McKernan(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" ETUR65669 11 55374019 55439999 65981 Loss 1 0.862556 77 868 chas 99.98 Loss 0 - 0 - Loss-- 49 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64937(2|Kidd(2008),Korbel(2007))" "65981(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 49 - 0 "65981(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401056TJ male "research_filter, clinical_filter" BNID76344 11 55374019 55439978 65960 Loss 1 0.864084 76 879 chas 99.98 Loss 0 - 0 - Loss-- 49 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64916(2|Kidd(2008),Korbel(2007))" "65960(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "65960(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" LCAJ69904 11 55374019 55439978 65960 Gain 3 0.873506 76 879 chas 0 - 72.4 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64916(2|Kidd(2008),Korbel(2007))" "65960(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "65960(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401595BL female "research_filter, clinical_filter" JIVU24920 11 55374019 55439978 65960 Gain 3 0.877203 76 879 chas 0 - 99.49 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64916(2|Kidd(2008),Korbel(2007))" "65960(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "65960(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400168HC female "research_filter, clinical_filter" WMOD47474 11 55374019 55439978 65960 Gain 3 0.875937 76 879 chas 0 - 99.88 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64916(2|Kidd(2008),Korbel(2007))" "65960(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 48 - 0 "65960(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401489CB male "research_filter, clinical_filter" MNUZ55770 11 55374035 55439978 65944 Gain 3 0.874293 75 891 chas 0 - 75.43 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64900(2|Kidd(2008),Korbel(2007))" "65944(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "65944(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400292LP female "research_filter, clinical_filter" RCXD61683 1 147929323 147995251 65929 Loss 1 0.878052 13 5494 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B,FLJ39739" 3 "PPIAL4A,PPIAL4B,FLJ39739" 3 - - - "65929(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 1 - 0 "65929(87|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401465TB male - MOBN67062 22 22684214 22750131 65918 Gain 3 0.903253 44 1532 chas 85.16 Gain 100 Gain 0 - GainGain- 75 NA NA NA "ChAS,IPN,NXS" 22q11.22 - - 0 - 0 - "65918#1%""22q11.2 distal deletion syndrome"":1580382" - "65918(49|Wang(2007),Ahn(2009),Itsara(2009),Matsuzaki(2009),Conrad(2009),de Smith(2007),Levy(2007),Park(2010),Pang(2010),Kidd(2008),Tuzun(2005),McCarroll(2005),Kim(2009),Simon-Sanchez(2007),Zogopoulos(2007))" 1747(2|Park(2010)) - 75 - 0 "65918(285|Wang(2007),Ahn(2009),Wong(2007),Durbin(2010),Kidd(2010),Teague(2010),Itsara(2009),Tuzun(2005),Locke(2006),McCarroll(2006),Pang(2010),Kidd(2008),Simon-Sanchez(2007),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),Shaikh(2009),Cooper(2008))" FALSE TRUE ipn_yes algo_yes NA 400569WC female research_filter JQGN11749 20 14767367 14833222 65856 Loss 1 0.918141 44 1531 chas 74.27 Loss 85.25 Loss 89.43 Loss LossLossLoss 79 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "65856(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 78 - 0 "65856(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400534ME male "research_filter, clinical_filter" XIWN71249 11 55374135 55439978 65844 Gain 3 0.880356 74 901 chas 0 - 92.71 Gain 0 - -Gain- 47 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64800(2|Kidd(2008),Korbel(2007))" "65844(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 46 - 0 "65844(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401935TM female "research_filter, clinical_filter" PNEQ37885 11 55374176 55439999 65824 Loss 1 0.863724 73 914 chas 100 Loss 0 - 0 - Loss-- 47 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64780(2|Kidd(2008),Korbel(2007))" "65824(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 47 - 0 "65824(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401781SL male "research_filter, clinical_filter" AWAR79338 11 55376485 55442305 65821 Loss 1 0.852118 73 914 chas 100 Loss 0 - 0 - Loss-- 42 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64777(2|Kidd(2008),Korbel(2007))" "65821(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65821(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" EIAZ51546 11 55376485 55442305 65821 Gain 3 0.883865 73 914 chas 0 - 92.13 Gain 0 - -Gain- 42 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64777(2|Kidd(2008),Korbel(2007))" "65821(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65821(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401261HD male "research_filter, clinical_filter" TLUK35377 11 55376498 55442305 65808 Loss 1 0.861637 72 926 chas 100 Loss 0 - 0 - Loss-- 42 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" KEHV72339 11 55376498 55442305 65808 Loss 1 0.855019 72 926 chas 100 Loss 0 - 0 - Loss-- 42 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" YQHR22161 11 55376498 55442305 65808 Loss 1 0.857086 72 926 chas 100 Loss 19.34 Loss 0 - LossLoss- 42 100 Loss "BS,IP6" "ChAS,IPN,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400845ML female "research_filter, clinical_filter" CMHA46888 11 55376498 55442305 65808 Loss 1 0.868119 72 926 chas 100 Loss 0 - 0 - Loss-- 42 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" YDUL84017 11 55376498 55442305 65808 Loss 1 0.876505 72 926 chas 100 Loss 0 - 0 - Loss-- 42 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" NINK42890 11 55376498 55442305 65808 Loss 1 0.860657 72 926 chas 100 Loss 0 - 0 - Loss-- 42 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" PRED73338 11 55376498 55442305 65808 Loss 1 0.873792 72 926 chas 100 Loss 0 - 0 - Loss-- 42 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401183HP female "research_filter, clinical_filter" FIIC23299 11 55376498 55442305 65808 Loss 1 0.864274 72 926 chas 100 Loss 0 - 0 - Loss-- 42 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400843FL female "research_filter, clinical_filter" JVBB89605 11 55376498 55442305 65808 Gain 3 0.890406 72 926 chas 0 - 49.59 Gain 0 - -Gain- 42 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400650RM male "research_filter, clinical_filter" ZVRQ32621 11 55376498 55442305 65808 Gain 3 0.885997 72 926 chas 0 - 49.01 Gain 0 - -Gain- 42 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401176BD male "research_filter, clinical_filter" JFSR33951 11 55376498 55442305 65808 Gain 3 0.8829 72 926 chas 0 - 28.19 Gain 0 - -Gain- 42 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400444MM female "research_filter, clinical_filter" QMSH77829 11 55376498 55442305 65808 Gain 3 0.884402 72 926 chas 0 - 69.56 Gain 0 - -Gain- 42 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400038CK male "research_filter, clinical_filter" FYVR80369 11 55376498 55442305 65808 Gain 3 0.883811 72 926 chas 0 - 90.62 Gain 0 - -Gain- 42 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401448BJ male "research_filter, clinical_filter" ZKCL87954 11 55376498 55442305 65808 Gain 3 0.888275 72 926 chas 0 - 82.92 Gain 0 - -Gain- 42 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401698SB male "research_filter, clinical_filter" ICDL89338 11 55376498 55442305 65808 Gain 3 0.875474 72 926 chas 0 - 0 - 0 - --- 42 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400977SC female clinical_filter MTFT89424 11 55376498 55442305 65808 Gain 3 0.878192 72 926 chas 0 - 0 - 0 - --- 42 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64764(2|Kidd(2008),Korbel(2007))" "65808(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "65808(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400949AM male clinical_filter BMGG13461 11 55374190 55439978 65789 Loss 1 0.858209 71 939 chas 100 Loss 0 - 0 - Loss-- 47 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64745(2|Kidd(2008),Korbel(2007))" "65789(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 45 - 0 "65789(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400002HK female "research_filter, clinical_filter" ORXL21407 6 78969403 79035172 65770 Loss 1 0.877537 23 2989 chas 100 Loss 0 - 0 - Loss-- 112 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "65770(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "65770(821|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402064DC male research_filter VPWL90389 13 84101178 84166896 65719 Loss 1 0.916194 56 1194 chas 76.49 Loss 83.86 Loss 91.32 Loss LossLossLoss 54 76.35 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "65719(17|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 54 - 0 "65719(37|Conrad(2009),Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" OEHV36421 19 54730238 54795939 65702 Gain 3 0.878043 42 1602 chas 16.82 Gain 25.14 Gain 0 - GainGain- 36 0 - - "ChAS,IPN,NXS" 19q13.42 - "LILRA6,MIR4752,LILRB5,LILRB2" 4 "LILRA6,MIR4752,LILRB5,LILRB2" 4 - - - "65702(51|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Gusev(2009),de Smith(2007),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Tuzun(2005),Itsara(2009),Ju(2010),Shaikh(2009))" - 37 35 - 0 "65702(277|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Campbell(2011),Pang(2010),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Ju(2010),Cooper(2008),Tuzun(2005),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Perry(2008b),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 401997HB male research_filter XHZD61935 15 102212934 102278612 65679 Gain 3 0.888738 220 299 chas 59.66 Gain 91.3 Gain 100 Gain GainGainGain 47 NA NA NA "ChAS,IPN,NXS,PTK" 15q26.3 - TARSL2 1 TARSL2 1 - "65679#1%""15q26 overgrowth syndrome"":3163423" - "65679(8|Perry(2008),Matsuzaki(2009),Pang(2010),Pinto(2007),Park(2010),Zogopoulos(2007))" "535(2|Wang(2008),Levy(2007))" 6 46 - 0 "65679(19|Teague(2010),Wang(2008),Perry(2008),Itsara(2009),Levy(2007),Locke(2006),Iafrate(2004),Durbin(2010),Pang(2010),Kidd(2008),Park(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" GUWW37548 17 44214094 44279760 65667 Loss 1 0.859491 62 1076 chas 100 Loss 0 - 0 - Loss-- 63 82.92 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 65667(1|Kidd(2008)) "65667(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "65667(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401195PN male "research_filter, clinical_filter" MKJI51363 12 43053624 43119283 65660 Gain 3 0.904271 57 1172 chas 92.47 Gain 100 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 12q12 - - 0 - 0 - - - - - - 52 - 0 65660(2|Wong(2007)) TRUE TRUE ipn_yes algo_yes NA 400047DS female "research_filter, clinical_filter" NKHQ61532 11 55376649 55442305 65657 Gain 3 0.879728 68 979 chas 0 - 66.24 Gain 0 - -Gain- 39 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "64613(2|Kidd(2008),Korbel(2007))" "65657(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 39 - 0 "65657(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400588BE female "research_filter, clinical_filter" AIKT30285 8 39318696 39384337 65642 Loss 1 0.874743 36 1875 chas 0 - 0 - 0 - --- 26 0 - - ChAS 8p11.22 - ADAM3A 1 ADAM3A 1 - - - "65642(28|Conrad(2009),Redon(2006),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 1503(2|Park(2010)) 4 26 - 0 "65642(224|Teague(2010),Wong(2007),Perry(2008),Conrad(2009),Ju(2010),Campbell(2011),Conrad(2006),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Park(2010),Kim(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no affy6_no 400618GC male clinical_filter VHGW31501 1 152526643 152592281 65639 Loss 1 0.896923 59 1131 chas 39.33 Loss 49.92 Loss 94.06 Loss LossLossLoss 92 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.3 - "LCE3D,LCE3E,LCE3B,LCE3C" 4 "LCE3D,LCE3E,LCE3B,LCE3C" 4 - - - "65639(33|Itsara(2009),Korbel(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Park(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Ju(2010),Shaikh(2009),McCarroll(2008))" - 4 92 - 0 "65639(181|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401819BS female "research_filter, clinical_filter" DGQM75197 1 104066658 104132185 65528 Gain 3 0.900373 36 1872 chas 100 Gain 100 Gain 100 Gain GainGainGain 26 0 - - "ChAS,IPN,NXS,PTK" 1p21.1 - "LOC648740,AMY2B,RNPC3" 3 "LOC648740,AMY2B,RNPC3" 3 - - - "30463(18|Wang(2007),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Pang(2010),McCarroll(2008),Park(2010),Shaikh(2009))" - 23 26 - 0 "65528(125|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Campbell(2011),Kidd(2008),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 400518MS female research_filter UYAI76550 4 2959221 3024723 65503 Gain 3 0.903416 64 1039 chas 91.79 Gain 91.6 Gain 0 - GainGain- 30 71.02 Gain "BS,IP6" "ChAS,IPN,NXS" 4p16.3 - "GRK4,NOP14" 2 "GRK4,NOP14" 2 - - - - 1(1|Levy(2007)) - 30 - 0 "65503(15|Itsara(2009),Pinto(2011),Levy(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" UCQK65306 4 101550894 101616281 65388 Loss 1 0.920353 44 1520 chas 96.55 Loss 85.57 Loss 100 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 4q24 - - 0 - 0 - - - "3098(7|Conrad(2009),McKernan(2009),Matsuzaki(2009),Bentley(2008))" - - 41 - 0 "11627(32|Conrad(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401196CR male "research_filter, clinical_filter" UBKP24592 1 158020230 158085574 65345 Gain 3 0.917486 60 1107 chas 99.87 Gain 99.99 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 1q23.1 - KIRREL 1 KIRREL 1 - - 1253(1|Ahn(2009)) - 657(1|Wang(2008)) - 63 - 0 "65345(9|Pinto(2011),Wang(2008),Ahn(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401513KC male "research_filter, clinical_filter" KWJN47187 2 35932262 35997473 65212 Loss 1 0.873845 36 1863 chas 17.95 Loss 0 - 0 - Loss-- 39 32.99 Loss "BS,GTC,IP6" "ChAS,IPN" 2p22.3 - - 0 - 0 - - - "65212(26|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010))" - - 39 - 0 "65212(107|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" HGZO79179 2 35932262 35997473 65212 Loss 1 0.871812 36 1863 chas 17.95 Loss 31.6 Loss 22.7 Loss LossLossLoss 39 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "65212(26|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010))" - - 39 - 0 "65212(107|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401151RJ male "research_filter, clinical_filter" ZKED26020 2 35932262 35997473 65212 Loss 1 0.871309 36 1863 chas 17.95 Loss 31.6 Loss 22.7 Loss LossLossLoss 39 NA NA NA "ChAS,IPN,NXS,PTK" 2p22.3 - - 0 - 0 - - - "65212(26|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010))" - - 39 - 0 "65212(107|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401652HL female "research_filter, clinical_filter" BCMG96058 6 78962293 79027502 65210 Gain 3 0.893228 25 2717 chas 0 - 94.53 Gain 0 - -Gain- 112 NA NA NA "ChAS,NXS" 6q14.1 - - 0 - 0 - - - "65210(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 112 - 0 "65210(820|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400013TA male research_filter UUMD32389 X 88618833 88684010 65178 Gain 2 0.843293 28 2414 chas 0 - 0 - 0 - --- 28 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "65178(3|Pang(2010),Conrad(2009))" - 98 28 - 0 "65178(9|Conrad(2009),Levy(2007),Durbin(2010),Pang(2010),Cooper(2008),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400609FJ male - TZGC22320 7 12275508 12340669 65162 Gain 3 0.902467 61 1086 chas 100 Gain 100 Gain 0 - GainGain- 54 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 7p21.3 - TMEM106B 1 TMEM106B 1 - - - - "856(8|Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Kim(2009),Mills(2006))" - 54 - 0 "1374(19|Wang(2008),Levy(2007),Durbin(2010),Bentley(2008),Kim(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401295HB male "research_filter, clinical_filter" XMVT70735 3 61659087 61724169 65083 Loss 1 0.933691 77 856 chas 91.6 Loss 95.81 Loss 95.82 Loss LossLossLoss 45 91.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p14.2 - PTPRG 1 - 0 - - - 1946(1|Mills(2006)) "401(5|Pang(2010),Levy(2007),McKernan(2009),Hinds(2005),Bentley(2008))" - 45 - 0 "65083(19|Pang(2010),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Hinds(2006),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401873BK male "research_filter, clinical_filter" IAET85141 17 44214722 44279760 65039 Loss 1 0.856834 61 1083 chas 100 Loss 0 - 0 - Loss-- 62 100 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 65039(1|Kidd(2008)) "65039(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 62 - 0 "65039(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401136LB male "research_filter, clinical_filter" CAYM40684 9 29943307 30008330 65024 Loss 1 0.912315 44 1512 chas 87.37 Loss 93.63 Loss 93.63 Loss LossLossLoss 78 NA NA NA "ChAS,IPN,NXS,PTK" 9p21.1 - - 0 - 0 - - - "65024(13|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Itsara(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Shaikh(2009),Zogopoulos(2007))" 457(1|Park(2010)) - 78 - 0 "65024(23|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),Pinto(2007),Park(2010),Jakobsson(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" AXJJ81139 11 55377289 55442305 65017 Loss 1 0.850418 66 1000 chas 100 Loss 0 - 0 - Loss-- 34 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "63973(2|Kidd(2008),Korbel(2007))" "65017(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 34 - 0 "65017(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400432VA male "research_filter, clinical_filter" TOTG24684 5 97050361 97115337 64977 Loss 1 0.921351 38 1756 chas 66.75 Loss 70.27 Loss 70.26 Loss LossLossLoss 45 75.35 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "64977(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "64977(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" OWVL37831 17 44214816 44279760 64945 Loss 1 0.863536 60 1100 chas 0 - 0 - 0 - --- 62 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 64945(1|Kidd(2008)) "64945(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 62 - 0 "64945(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400770MA female clinical_filter ORMZ25698 5 17602802 17667728 64927 Loss 1 0.883782 29 2318 chas 79.71 Loss 0 - 0 - Loss-- 27 NA NA NA "ChAS,IPN" 5p15.1 - - 0 - 0 - - - "64927(29|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 62 27 - 0 "64927(114|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400600DP female "research_filter, clinical_filter" KGCF91244 6 78962581 79027502 64922 Loss 1 0.882014 24 2822 chas 100 Loss 0 - 0 - Loss-- 111 90.01 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "64922(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "64922(820|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female research_filter QTRF59074 6 78962581 79027502 64922 Loss 1 0.88125 24 2822 chas 89.95 Loss 45.25 Loss 0 - LossLoss- 111 90.03 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 6q14.1 - - 0 - 0 - - - "64922(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "64922(820|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400881GS female research_filter WCSO50334 6 78962581 79027502 64922 Loss 1 0.875904 24 2822 chas 0 - 0 - 0 - --- 111 90.01 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "64922(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "64922(820|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400073HT male - BYSK29073 6 78962581 79027502 64922 Loss 1 0.884775 24 2822 chas 0 - 0 - 0 - --- 111 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "64922(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 111 - 0 "64922(820|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400620MT male - AWAR79338 1 191676818 191741681 64864 Loss 1 0.90033 44 1508 chas 80.47 Loss 86.33 Loss 86.31 Loss LossLossLoss 45 80.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.2 - - 0 - 0 - - - "10351(7|Wheeler(2008),McCarroll(2008),Altshuler(2010),Shaikh(2009),Matsuzaki(2009))" 989(1|Conrad(2009)) - 45 - 0 "52436(10|Conrad(2009),Perry(2008b),Durbin(2010),Wilson(2010),Altshuler(2010),Campbell(2011),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" THXY16685 20 14868353 14933129 64777 Loss 1 0.917064 64 1028 chas 88.58 Loss 93.1 Loss 93.09 Loss LossLossLoss 88 88.02 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 20p12.1 - "MACROD2-AS1,MACROD2" 2 MACROD2-AS1 1 - - - "64777(18|Itsara(2009),Korbel(2007),Redon(2006),Conrad(2009),de Smith(2007),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Jakobsson(2008),Simon-Sanchez(2007))" - - 88 - 0 "64777(71|Conrad(2009),Shaikh(2009),Korbel(2007),Jakobsson(2008),Kidd(2010b),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),Pinto(2011),Redon(2006),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" CMHA46888 1 248154268 248219011 64744 Loss 1 0.910852 78 840 chas 94.62 Loss 82.65 Loss 100 Loss LossLossLoss 39 86.15 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q44 - "OR2L1P,OR2L13,OR2L2" 3 "OR2L1P,OR2L2" 2 - - - "64744(11|Conrad(2009),Redon(2006),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pinto(2007),Park(2010),Shaikh(2009))" "1364(5|Wang(2008),Wheeler(2008),Matsuzaki(2009),Bentley(2008))" - 39 - 0 "64744(32|Conrad(2009),Redon(2006),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Park(2010),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" SAHS24305 11 24075930 24140665 64736 Loss 1 0.895124 52 1269 chas 87.14 Loss 93.56 Loss 93.56 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 11p14.3 - - 0 - 0 - - 995(1|Ahn(2009)) "45463(2|Park(2010),McKernan(2009))" - - 42 - 0 "64736(7|Itsara(2009),Park(2010),Ahn(2009),McKernan(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" ZIOC12306 X 103171609 103236332 64724 Gain 2 0.924237 48 1377 chas 87.92 Gain 0 - 0 - Gain-- 36 69.51 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400852WJ male research_filter FNMA81925 X 103171609 103236332 64724 Gain 3 0.97516 48 1377 chas 87.92 Gain 0 - 0 - Gain-- 36 89 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400171BJ male research_filter GWRR97762 X 103171609 103236332 64724 Gain 3 0.887282 48 1377 chas 68.39 Gain 0 - 0 - Gain-- 36 69.51 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400130HA female research_filter PQCI84759 X 103171609 103236332 64724 Gain 4 0.941378 48 1377 chas 68.39 Gain 0 - 0 - Gain-- 36 69.51 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400076LC female research_filter YITU99076 X 103171609 103236332 64724 Gain 3 0.975863 48 1377 chas 87.92 Gain 0 - 0 - Gain-- 36 NA NA NA "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401362ME male research_filter UYUQ10460 X 103171609 103236332 64724 Gain 3 0.90861 48 1377 chas 52.45 Gain 0 - 0 - Gain-- 36 NA NA NA "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 63 36 - 0 "64724(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400971MK female research_filter XSMN99460 1 225434786 225499506 64721 Gain 3 0.9043 75 874 chas 85.19 Gain 100 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 1q42.12 - DNAH14 1 DNAH14 1 - - - - - - 51 - 0 "64721(5|Pinto(2011),Wong(2007),Redon(2006),Shaikh(2009),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 401235IA male "research_filter, clinical_filter" RZMS47755 13 64242856 64307519 64664 Loss 1 0.89982 68 965 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.31 - - 0 - 0 - - 43962(1|Kidd(2008)) "46747(5|Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 16 49 - 0 "64664(15|Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400387HE female "research_filter, clinical_filter" AYLS39762 5 104433409 104498041 64633 Loss 1 0.9435 61 1077 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 44 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64633(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 44 - 0 "64633(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400663MD female "research_filter, clinical_filter" YTOE66394 4 18725182 18789799 64618 Gain 3 0.9049 52 1267 chas 73.66 Gain 94.26 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 4p15.31 - - 0 - 0 - - - 1643(1|McKernan(2009)) "847(3|Levy(2007),Bentley(2008),Mills(2006))" - 56 - 0 "33424(21|Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401454CD male "research_filter, clinical_filter" QGND60775 3 106415368 106479955 64588 Gain 3 0.896684 32 2083 chas 78.65 Gain 89.2 Gain 0 - GainGain- 34 81.13 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3q13.12 - - 0 - 0 - - - 4860(1|Simon-Sanchez(2007)) 194(1|Bentley(2008)) - 34 - 0 "64588(14|Itsara(2009),Durbin(2010),Simon-Sanchez(2007),Bentley(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401085LA_1 female research_filter ZRZC68152 1 9326599 9391186 64588 Gain 3 0.890229 77 849 chas 20.87 Gain 91.52 Gain 0 - GainGain- 51 99.93 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.22 - "SPSB1,H6PD" 2 "SPSB1,H6PD" 2 H6PD - - "64588(6|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 51 - 0 "64588(14|Itsara(2009),Wong(2007),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400155CW male "research_filter, clinical_filter" USUN51593 5 104433581 104498041 64461 Loss 1 0.923674 60 1092 chas 100 Loss 99.93 Loss 100 Loss LossLossLoss 43 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" RYTQ14327 5 104433581 104498041 64461 Loss 1 0.91577 60 1092 chas 100 Loss 100 Loss 100 Loss LossLossLoss 43 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400374LB female "research_filter, clinical_filter" QTRF59074 5 104433581 104498041 64461 Loss 1 0.940806 60 1092 chas 100 Loss 100 Loss 100 Loss LossLossLoss 43 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" MUIH56067 5 104433581 104498041 64461 Loss 1 0.940885 60 1092 chas 100 Loss 100 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" ZVON68408 5 104433581 104498041 64461 Loss 1 0.926652 60 1092 chas 100 Loss 100 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" SEZK29585 5 104433581 104498041 64461 Loss 1 0.931045 60 1092 chas 99.98 Loss 94.79 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" LMDJ78561 5 104433581 104498041 64461 Loss 1 0.918764 60 1092 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" XOQW96687 5 104433581 104498041 64461 Loss 1 0.916823 60 1092 chas 99.98 Loss 97.8 Loss 97.8 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400121PL female "research_filter, clinical_filter" GDZR23108 5 104433581 104498041 64461 Loss 1 0.929123 60 1092 chas 99.98 Loss 97.8 Loss 100 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - RAB9BP1 1 RAB9BP1 1 - - - "64461(15|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - 2 43 - 0 "64461(44|Wang(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400375KA female "research_filter, clinical_filter" TOTG24684 16 74397974 74462393 64420 Loss 1 0.902069 15 4601 chas 0 - 17.49 Loss 0 - -Loss- 8 0 - - "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "64420(25|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 8 - 0 "64420(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 401764JJ male research_filter WGSV83254 1 108925790 108990190 64401 Loss 1 0.925177 14 4953 chas 0 - 98.32 Loss 0 - -Loss- 11 NA NA NA "ChAS,NXS" 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "64401(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 11 - 0 "64401(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401733CG male research_filter NVMX58254 1 108925790 108990190 64401 Loss 1 0.907238 14 4953 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "64401(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 11 - 0 "64401(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 402060PD female - TMXA54308 1 152527789 152592184 64396 Loss 1 0.924449 56 1170 chas 37.04 Loss 50.91 Loss 90.7 Loss LossLossLoss 88 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.3 - "LCE3D,LCE3E,LCE3B,LCE3C" 4 "LCE3D,LCE3E,LCE3B,LCE3C" 4 - - - "64396(33|Itsara(2009),Korbel(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Park(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Ju(2010),Shaikh(2009),McCarroll(2008))" - 4 88 - 0 "64396(181|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" KKRR12131 1 152527789 152592184 64396 Loss 1 0.913709 56 1170 chas 37.22 Loss 50.91 Loss 94.1 Loss LossLossLoss 88 NA NA NA "ChAS,IPN,NXS,PTK" 1q21.3 - "LCE3D,LCE3E,LCE3B,LCE3C" 4 "LCE3D,LCE3E,LCE3B,LCE3C" 4 - - - "64396(33|Itsara(2009),Korbel(2007),Jakobsson(2008),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Park(2010),Matsuzaki(2009),Pang(2010),Kidd(2008),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Ju(2010),Shaikh(2009),McCarroll(2008))" - 4 88 - 0 "64396(181|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Campbell(2011),Pang(2010),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Cooper(2008),Tuzun(2005),Wheeler(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" NVDU55912 10 47045153 47109535 64383 Gain 3 0.87146 98 663 chas 0 - 5.43 Gain 0 - -Gain- 86 NA NA NA "ChAS,NXS" 10q11.22 - "LOC643650,PPYR1" 2 "LOC643650,PPYR1" 2 - - "18120(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "64383(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" - 85 - 0 "64383(221|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 401307VR male "research_filter, clinical_filter" PCSL59179 7 33125662 33190012 64351 Gain 3 0.903613 84 775 chas 73.86 Gain 86.86 Gain 100 Gain GainGainGain 38 NA NA NA "ChAS,IPN,NXS,PTK" 7p14.3 - "RP9,BBS9" 2 "RP9,BBS9" 2 "RP9,BBS9" - - "58284(6|Conrad(2009),Ahn(2009),Itsara(2009),Park(2010),Kim(2009),Shaikh(2009))" 646(1|Park(2010)) - 38 - 0 "64351(43|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Wong(2007),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401879HJ male "research_filter, clinical_filter" EZOV24426 2 78735118 78799458 64341 Loss 1 0.93029 42 1569 chas 97.77 Loss 88.19 Loss 98.3 Loss LossLossLoss 36 NA NA NA "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - - "503(3|Wang(2008),Bentley(2008))" - 36 - 0 "64341(21|Itsara(2009),Wang(2008),Durbin(2010),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 400454RE male "research_filter, clinical_filter" PDHC59420 Y 26150342 26214671 64330 Loss 0 0.825035 135 480 chas 100 Loss 0 - 0 - Loss-- 26 NA NA NA "ChAS,IPN" "Yq11.23,Yq11.223" - "CDY1B,CDY1" 2 "CDY1B,CDY1" 2 - "64330#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "64330(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 26 - 0 "64330(3|McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" NZSQ74406 9 7868292 7932619 64328 Loss 1 0.902521 44 1496 chas 62.9 Loss 68.43 Loss 100 Loss LossLossLoss 39 95.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p24.1 - - 0 - 0 - - - 44864(1|Perry(2008)) - - 39 - 0 "64328(10|Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" ZEGT44347 5 104321019 104385340 64322 Loss 1 0.92942 40 1649 chas 89.24 Loss 92.07 Loss 94.62 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.2 - - 0 - 0 - - - 31714(1|Simon-Sanchez(2007)) - - 45 - 0 "64322(4|Redon(2006),Shaikh(2009),Simon-Sanchez(2007),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 401609MB female "research_filter, clinical_filter" PDHC59420 Y 17736310 17800622 64313 Loss 0 0.839296 32 2074 chas 100 Loss 0 - 0 - Loss-- 52 NA NA NA "ChAS,IPN" Yq11.221 - - 0 - 0 - - - - - - 52 - 0 64313(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401457WK male "research_filter, clinical_filter" AXJJ81139 17 44212310 44276618 64309 Loss 1 0.855824 68 959 chas 97.23 Loss 0 - 0 - Loss-- 65 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 64309(1|Kidd(2008)) "64309(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 65 - 0 "64309(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400432VA male "research_filter, clinical_filter" HQWW55061 12 7432998 7497250 64253 Gain 3 0.912711 60 1089 chas 68.62 Gain 93.84 Gain 0 - GainGain- 26 87.71 Gain GTC "ChAS,IPN,NXS" 12p13.31 - ACSM4 1 ACSM4 1 - - - - - - 25 - 0 "64253(4|Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" CKLN80228 5 12675353 12739595 64243 Loss 1 0.917772 96 676 chas 100 Loss 100 Loss 100 Loss LossLossLoss 26 99.86 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "64243(4|Park(2010),Kidd(2008),Shaikh(2009),Conrad(2009))" - - 26 - 0 "64243(17|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400695PH female "research_filter, clinical_filter" AVKM43792 5 12675353 12739595 64243 Loss 1 0.927228 96 676 chas 92.91 Loss 96.68 Loss 99.91 Loss LossLossLoss 26 99.86 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "64243(4|Park(2010),Kidd(2008),Shaikh(2009),Conrad(2009))" - - 26 - 0 "64243(17|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401246HH male "research_filter, clinical_filter" DZXP20142 5 12675353 12739595 64243 Loss 1 0.90301 96 676 chas 99.69 Loss 96.34 Loss 100 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "64243(4|Park(2010),Kidd(2008),Shaikh(2009),Conrad(2009))" - - 26 - 0 "64243(17|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" MFZY15027 6 29091576 29155749 64174 Gain 3 0.899992 48 1365 chas 91.41 Gain 100 Gain 0 - GainGain- 9 NA NA NA "ChAS,IPN,NXS" 6p22.1 - OR2J2 1 OR2J2 1 - - - "64174(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 16 9 - 0 "64174(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401739BJ male research_filter ZPIM60940 7 15061959 15126128 64170 Loss 1 0.921914 56 1166 chas 88.54 Loss 94.36 Loss 94.36 Loss LossLossLoss 56 88.71 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.2 - - 0 - 0 - - - "57172(9|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Altshuler(2010),Pinto(2007),McCarroll(2008))" 574(1|Perry(2008)) - 56 - 0 "64170(35|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Campbell(2011),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" RDBP35321 16 22718351 22782512 64162 Gain 3 0.911099 44 1492 chas 67.8 Gain 67.57 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 16p12.2 - "MIR548AA2,MIR548D2" 2 "MIR548AA2,MIR548D2" 2 - "64162#1%""16p11.2-p12.2 microdeletion syndrome"":7428237" - "59427(10|Sebat(2004),Redon(2006),Wang(2007),de Smith(2007),Itsara(2009),Jakobsson(2008),Shaikh(2009))" - - 65 - 0 "64162(28|Sebat(2004),Redon(2006),Wang(2007),Itsara(2009),Durbin(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400773GS male research_filter MGYM61346 6 29091591 29155749 64159 Loss 1 0.913491 47 1394 chas 97.61 Loss 91.32 Loss 97.63 Loss LossLossLoss 9 100 - BS "ChAS,IPN,NXS,PTK" 6p22.1 - OR2J2 1 OR2J2 1 - - - "64159(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 16 9 - 0 "64159(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400974PS female "research_filter, clinical_filter" LOOD16085 16 32524765 32588890 64126 Loss 1 0.940123 10 7125 chas 0 - 100 Loss 100 Loss #NAME? 18 NA NA NA "ChAS,NXS,PTK" 16p11.2 - - 0 - 0 - - 64126(1|Kidd(2008)) "64126(22|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 17 - 0 "64126(143|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_yes NA 400376SJ female research_filter TBVD73320 16 32524765 32588890 64126 Loss 1 0.961584 10 7125 chas 0 - 0 - 86.06 Loss #NAME? 18 NA NA NA "ChAS,PTK" 16p11.2 - - 0 - 0 - - 64126(1|Kidd(2008)) "64126(22|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 17 - 0 "64126(143|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_yes NA 400712GC female research_filter LMDJ78561 16 32524765 32588890 64126 Loss 1 0.962624 10 7125 chas 0 - 100 Loss 86.06 Loss #NAME? 18 NA NA NA "ChAS,NXS,PTK" 16p11.2 - - 0 - 0 - - 64126(1|Kidd(2008)) "64126(22|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 17 - 0 "64126(143|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_yes NA 401518VK female research_filter VVRJ19010 16 32524765 32588890 64126 Loss 1 0.895924 10 7125 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 16p11.2 - - 0 - 0 - - 64126(1|Kidd(2008)) "64126(22|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 17 - 0 "64126(143|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_no NA 401535RJ male - UXJM82913 16 32524765 32588890 64126 Loss 1 0.933592 10 7125 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 16p11.2 - - 0 - 0 - - 64126(1|Kidd(2008)) "64126(22|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 17 - 0 "64126(143|Conrad(2009),Ahn(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_no NA 401359HF male - KWYE93203 7 38292663 38356732 64070 Loss 1 0.891184 84 771 chas 0 - 98.98 Loss 98.97 Loss #NAME? 92 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "64070(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 40 92 - 0 "64070(54|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401357MH male "research_filter, clinical_filter" VYEA28313 9 18182534 18246545 64012 Loss 1 0.934887 44 1488 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 58 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p22.2 - - 0 - 0 - - - 64012(1|Shaikh(2009)) - - 58 - 0 "23539(4|Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400983PV female "research_filter, clinical_filter" TLUK35377 12 31999647 32063640 63994 Gain 3 0.892265 60 1084 chas 94.87 Gain 67.05 Gain 0 - GainGain- 63 99 Gain "GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" DBZL89045 12 31999647 32063640 63994 Gain 3 0.895621 60 1084 chas 94.87 Gain 97.29 Gain 0 - GainGain- 63 50.4 Gain "BS,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400032RC female "research_filter, clinical_filter" IAQN76409 12 31999647 32063640 63994 Gain 3 0.889281 60 1084 chas 94.87 Gain 79.11 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" ETUR65669 12 31999647 32063640 63994 Gain 3 0.891321 60 1084 chas 67.39 Gain 68.06 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401056TJ male "research_filter, clinical_filter" SBJN54268 12 31999647 32063640 63994 Gain 3 0.882757 60 1084 chas 94.87 Gain 97.29 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" XNCW62958 12 31999647 32063640 63994 Gain 3 0.88735 60 1084 chas 37.98 Gain 67.7 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" QEPL68818 12 31999647 32063640 63994 Gain 3 0.894386 60 1084 chas 67.39 Gain 97.94 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63994(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63994(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402028BD male "research_filter, clinical_filter" EIKI77114 11 55376010 55439978 63969 Gain 3 0.87905 70 927 chas 0 - 95.54 Gain 0 - -Gain- 45 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "62925(2|Kidd(2008),Korbel(2007))" "63969(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "63969(728|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401221LD female "research_filter, clinical_filter" LFNU24334 14 70949267 71013234 63968 Gain 3 0.885654 77 841 chas 99.98 Gain 100 Gain 0 - GainGain- 34 92.37 Gain "BS,IP6" "ChAS,IPN,NXS" 14q24.2 - "C14orf55,ADAM20" 2 "C14orf55,ADAM20" 2 - - - - - - 34 - 0 "63968(2|Korbel(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400471YS male "research_filter, clinical_filter" HEJH85210 4 93325086 93389036 63951 Loss 1 0.921386 60 1083 chas 90.59 Loss 95.29 Loss 95.29 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 4q22.1 - GRID2 1 - 0 - - - - - - 25 - 0 "51146(3|Itsara(2009),Wilson(2010),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401884WJ male "research_filter, clinical_filter" DWHR77544 11 48301039 48364967 63929 Gain 3 0.872692 60 1083 chas 59.1 Gain 70.07 Gain 0 - GainGain- 29 NA NA NA "ChAS,IPN,NXS" 11p11.2 - "OR4S1,OR4C3" 2 "OR4S1,OR4C3" 2 - - - "20020(3|Pinto(2007),Matsuzaki(2009),Perry(2008))" "2428(10|Conrad(2009),Ahn(2009),Matsuzaki(2009),de Smith(2007),Bentley(2008),Park(2010),Kim(2009))" - 29 - 0 "63929(64|Teague(2010),Ahn(2009),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Kidd(2008),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Pinto(2007),Perry(2008b),Park(2010),Jakobsson(2008),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401468RL male "research_filter, clinical_filter" AJUD27157 8 115312067 115375978 63912 Loss 1 0.92463 48 1359 chas 91.13 Loss 95.08 Loss 95.08 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 8q23.3 - - 0 - 0 - - - "63912(3|Itsara(2009),Wang(2007),Shaikh(2009))" - - 35 - 0 "63912(8|Pinto(2011),Wang(2007),Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401075MN female "research_filter, clinical_filter" NKHQ61532 6 10467101 10530991 63891 Loss 1 0.919863 60 1082 chas 100 Loss 100 Loss 100 Loss LossLossLoss 81 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p24.3 - GCNT2 1 GCNT2 1 GCNT2 - - "63891(9|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),McCarroll(2005))" 159(1|Bentley(2008)) - 81 - 0 "63891(19|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Jakobsson(2008),Bentley(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" YCEN33630 6 10467101 10530991 63891 Loss 1 0.921445 60 1082 chas 99.48 Loss 100 Loss 100 Loss LossLossLoss 81 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6p24.3 - GCNT2 1 GCNT2 1 GCNT2 - - "63891(9|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),McCarroll(2005))" 159(1|Bentley(2008)) - 81 - 0 "63891(19|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Jakobsson(2008),Bentley(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" QYVK49015 6 10467101 10530991 63891 Loss 1 0.920814 60 1082 chas 100 Loss 100 Loss 100 Loss LossLossLoss 81 NA NA NA "ChAS,IPN,NXS,PTK" 6p24.3 - GCNT2 1 GCNT2 1 GCNT2 - - "63891(9|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),McCarroll(2005))" 159(1|Bentley(2008)) - 81 - 0 "63891(19|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Conrad(2006),Durbin(2010),De(Smith_2007),Kidd(2008),Pinto(2007),Jakobsson(2008),Bentley(2008),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" BOER26307 22 30289160 30353024 63865 Loss 1 0.932047 58 1120 chas 93.19 Loss 96.34 Loss 96.34 Loss LossLossLoss 32 93.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 22q12.2 - MTMR3 1 - 0 - - - "11125(3|Park(2010),Conrad(2009))" "849(3|Conrad(2009),Matsuzaki(2009))" 15 31 - 0 "42154(30|Conrad(2009),Kidd(2008),Durbin(2010),Park(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400571WV female "research_filter, clinical_filter" GDZR23108 22 42918727 42982572 63846 Loss 1 0.934499 32 2059 chas 99.96 Loss 99.99 Loss 95.77 Loss LossLossLoss 31 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.2 - "POLDIP3,SERHL2,RRP7B" 3 "POLDIP3,SERHL2,RRP7B" 3 - - - "63846(14|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" - 54 31 - 0 "63846(82|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),McKernan(2009),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400375KA female "research_filter, clinical_filter" VWYL75938 10 4548375 4612179 63805 Loss 1 0.935346 55 1181 chas 76.21 Loss 88.06 Loss 88.07 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 10p15.1 - - 0 - 0 - - - - - - 59 - 0 "24251(2|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401006ES female "research_filter, clinical_filter" XUUY89365 12 31999647 32063445 63799 Gain 3 0.893817 59 1099 chas 95.16 Gain 97.59 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "63799(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63799(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" TUWR15724 17 44212824 44276618 63795 Loss 1 0.857474 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401207DA male "research_filter, clinical_filter" HXSU46589 17 44212824 44276618 63795 Gain 3 0.907052 64 1012 chas 47.62 Gain 100 Gain 0 - GainGain- 64 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401299ST female "research_filter, clinical_filter" ZIOC12306 17 44212824 44276618 63795 Loss 1 0.857792 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 100 Loss IP6 "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400852WJ male "research_filter, clinical_filter" YWQF89241 17 44212824 44276618 63795 Loss 1 0.859797 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 100 Loss IP6 "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400509CJ female "research_filter, clinical_filter" FDPK98295 17 44212824 44276618 63795 Loss 1 0.857453 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 100 Loss IP6 "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" LAYE10086 17 44212824 44276618 63795 Gain 3 0.918983 64 1012 chas 100 Gain 99.5 Gain 0 - GainGain- 64 97.92 Gain GTC "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" CCNM95095 17 44212824 44276618 63795 Loss 1 0.864578 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401881TJ male "research_filter, clinical_filter" KIAD94479 17 44212824 44276618 63795 Gain 3 0.916106 64 1012 chas 47.62 Gain 99.5 Gain 0 - GainGain- 64 100 Gain "BS,GTC" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" RAZI40834 17 44212824 44276618 63795 Loss 1 0.85916 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 100 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" WKAY66815 17 44212824 44276618 63795 Gain 3 0.912733 64 1012 chas 47.62 Gain 100 Gain 0 - GainGain- 64 99.4 Gain "BS,GTC" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400681MC female "research_filter, clinical_filter" CHSN35204 17 44212824 44276618 63795 Loss 1 0.852723 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400674CA male "research_filter, clinical_filter" YZQJ34471 17 44212824 44276618 63795 Loss 1 0.857035 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400482MD male "research_filter, clinical_filter" AIKT30285 17 44212824 44276618 63795 Loss 1 0.867171 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400618GC male "research_filter, clinical_filter" EJHE40652 17 44212824 44276618 63795 Loss 1 0.869749 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 99.4 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" ZVON68408 17 44212824 44276618 63795 Gain 3 0.914548 64 1012 chas 100 Gain 100 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" PWPH55056 17 44212824 44276618 63795 Loss 1 0.865058 64 1012 chas 98.01 Loss 0 - 0 - Loss-- 64 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401804FG male "research_filter, clinical_filter" PTKC28903 17 44212824 44276618 63795 Loss 1 0.84985 64 1012 chas 96.86 Loss 0 - 0 - Loss-- 64 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400442FE female "research_filter, clinical_filter" VUFI80076 17 44212824 44276618 63795 Gain 3 0.900091 64 1012 chas 99.98 Gain 60.25 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" QXHS37749 17 44212824 44276618 63795 Loss 1 0.865527 64 1012 chas 34.81 Loss 0 - 0 - Loss-- 64 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401943KA male "research_filter, clinical_filter" CSHY74530 17 44212824 44276618 63795 Gain 3 0.903933 64 1012 chas 0 - 63.32 Gain 0 - -Gain- 64 100 Gain "GTC,IP6" "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" OBAS32636 17 44212824 44276618 63795 Gain 3 0.904531 64 1012 chas 0 - 99.5 Gain 0 - -Gain- 64 100 Gain "BS,GTC,IP6" "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63795(1|Kidd(2008)) "63795(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 64 - 0 "63795(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400249BC female "research_filter, clinical_filter" BWCN37814 7 142827954 142891709 63756 Loss 1 0.931164 83 777 chas 100 Loss 100 Loss 100 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63756(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401966SR male "research_filter, clinical_filter" VIXQ67410 7 142827954 142891709 63756 Loss 1 0.918056 83 777 chas 100 Loss 100 Loss 100 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63756(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" FDPK98295 7 142827954 142891708 63755 Loss 1 0.920668 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" YWSA20061 7 142827954 142891708 63755 Loss 1 0.936397 82 787 chas 100 Loss 97.12 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" HXWA61262 7 142827954 142891708 63755 Loss 1 0.919018 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401438HT male "research_filter, clinical_filter" KECG80750 7 142827954 142891708 63755 Loss 1 0.931368 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400893ZE male "research_filter, clinical_filter" VOAZ29383 7 142827954 142891708 63755 Loss 1 0.915639 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400834SS female "research_filter, clinical_filter" SEZK29585 7 142827954 142891708 63755 Loss 1 0.918884 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401428LD female "research_filter, clinical_filter" VAON88685 7 142827954 142891708 63755 Loss 1 0.917343 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" LHVX52107 7 142827954 142891708 63755 Loss 1 0.919283 82 787 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "55404(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 33 - 0 "63755(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401341TS female "research_filter, clinical_filter" VUUO47049 19 55283915 55347661 63747 Loss 1 0.873892 29 2276 chas 78.3 Loss 64.4 Loss 0 - LossLoss- 32 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 KIR3DL1 - - "63747(47|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 32 - 0 "63747(114|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400533BB female "research_filter, clinical_filter" KIAD94479 19 55283916 55347661 63746 Loss 1 0.891554 28 2360 chas 39.94 Loss 37.83 Loss 0 - LossLoss- 32 65.65 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.42 - "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 KIR3DL1 - - "63746(47|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 32 - 0 "63746(114|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" RIAA15120 17 44212824 44276547 63724 Loss 1 0.858486 63 1027 chas 96.86 Loss 99.5 Loss 0 - LossLoss- 63 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63724(1|Kidd(2008)) "63724(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "63724(219|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" SJFM69248 5 109235715 109299399 63685 Loss 1 0.93345 51 1273 chas 93.35 Loss 90.54 Loss 90.52 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.3 - - 0 - 0 - - - - "783(5|Wang(2008),Levy(2007),Ahn(2009),Mills(2006))" - 55 - 0 "63685(22|Ahn(2009),Wong(2007),Wang(2008),Durbin(2010),Itsara(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401655DC male "research_filter, clinical_filter" DLYI64271 X 154207494 154271174 63681 Gain 3 0.887213 163 393 chas 81.39 Gain 0 - 0 - Gain-- 25 NA NA NA "ChAS,IPN" Xq28 - "F8,FUNDC2" 2 "F8,FUNDC2" 2 F8 - - 63681(1|Levy(2007)) - 2 24 - 0 "63681(3|Levy(2007),De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401292ER female "research_filter, clinical_filter" HQWW55061 5 180378754 180442428 63675 Loss 1 0.877441 40 1632 chas 81.74 Loss 0 - 0 - Loss-- 22 61.8 Loss BS "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" VQFC85923 5 180378754 180442428 63675 Loss 1 0.97201 40 1632 chas 81.74 Loss 100 Loss 100 Loss LossLossLoss 22 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401239PR male "research_filter, clinical_filter" WGSV83254 5 180378754 180442428 63675 Loss 0 0.977387 40 1632 chas 81.74 Loss 100 Loss 71.95 Loss LossLossLoss 22 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" UYMD11362 5 180378754 180442428 63675 Gain 3 0.896167 40 1632 chas 81.73 Gain 71.97 Gain 0 - GainGain- 22 61.8 Gain IP6 "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400030WD female research_filter OBAS32636 5 180378754 180442428 63675 Gain 3 0.904955 40 1632 chas 81.73 Gain 100 Gain 0 - GainGain- 22 0 - - "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400249BC female research_filter DUEF32956 5 180378754 180442428 63675 Gain 3 0.889348 40 1632 chas 81.74 Gain 100 Gain 0 - GainGain- 22 0 - - "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 401190WC male research_filter YQRA83123 5 180378754 180442428 63675 Gain 3 0.900854 40 1632 chas 81.74 Gain 44.31 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400416KA male research_filter DMPI37172 5 180378754 180442428 63675 Gain 3 0.908773 40 1632 chas 81.74 Gain 100 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400287BP male research_filter QRNV11451 5 180378754 180442428 63675 Gain 3 0.894273 40 1632 chas 81.74 Gain 99.98 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401918CA male research_filter QUGL52736 5 180378754 180442428 63675 Gain 3 0.892823 40 1632 chas 81.74 Gain 60.13 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401780BB male research_filter LLRB50237 5 180378754 180442428 63675 Gain 3 0.89467 40 1632 chas 81.73 Gain 61.03 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401594MP female research_filter ZWJR15881 5 180378754 180442428 63675 Gain 3 0.908629 40 1632 chas 81.74 Gain 99.87 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401119DK male research_filter GLGF34868 5 180378754 180442428 63675 Gain 3 0.904016 40 1632 chas 81.74 Gain 61.5 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401268PS male research_filter UUMD32389 5 180378754 180442428 63675 Gain 4 0.921435 40 1632 chas 81.74 Gain 71.97 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400609FJ male research_filter RDBP35321 5 180378754 180442428 63675 Gain 3 0.904405 40 1632 chas 0 - 90.85 Gain 0 - -Gain- 22 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400773GS male research_filter VOAZ29383 5 180378754 180442428 63675 Gain 3 0.900938 40 1632 chas 0 - 99.98 Gain 0 - -Gain- 22 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400834SS female research_filter TPDE39419 5 180378754 180442428 63675 Gain 3 0.894709 40 1632 chas 0 - 99.98 Gain 0 - -Gain- 22 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63675(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63675(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401369GR male research_filter YMNK31782 10 47085737 47149411 63675 Loss 1 0.859948 80 806 chas 100 Loss 0 - 0 - Loss-- 58 0 - - "ChAS,IPN" 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "63675(35|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1980(10|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 2 58 - 0 "63675(203|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400438DB female "research_filter, clinical_filter" VVDA27035 5 180378754 180442388 63635 Gain 3 0.904814 39 1674 chas 0 - 100 Gain 0 - -Gain- 22 61.84 Gain "GTC,IP6" "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63635(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 21 - 0 "63635(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400377WJ male research_filter TEQK36134 5 180378754 180442387 63634 Gain 3 0.910189 38 1719 chas 81.79 Gain 72.01 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63634(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 21 - 0 "63634(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400908PJ female research_filter FNMA81925 5 180378754 180442387 63634 Gain 3 0.892778 38 1719 chas 0 - 60.03 Gain 0 - -Gain- 21 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63634(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 21 - 0 "63634(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400171BJ male research_filter LDEW86321 7 85006882 85070505 63624 Loss 1 0.912769 30 2193 chas 79.34 Loss 88.28 Loss 0 - LossLoss- 37 80.02 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 7q21.11 - - 0 - 0 - - - - - - 37 - 0 "48785(8|Teague(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401786WD male "research_filter, clinical_filter" OWWC21327 5 12675353 12738923 63571 Loss 1 0.921211 93 690 chas 99.84 Loss 88.32 Loss 99.91 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "63571(4|Park(2010),Kidd(2008),Shaikh(2009),Conrad(2009))" - - 26 - 0 "63571(17|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400547BS female "research_filter, clinical_filter" MKJI51363 5 180378875 180442428 63554 Gain 3 0.889993 38 1717 chas 81.7 Gain 91.02 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "63554(25|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),Itsara(2009),McCarroll(2008),Park(2010),Jakobsson(2008),Ju(2010),Kim(2009))" 599(1|de Smith(2007)) 10 22 - 0 "63554(143|Ju(2010),Redon(2006),Teague(2010),Perry(2008b),Pang(2010),Locke(2006),Pinto(2011),Wang(2007),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 400047DS female research_filter ZHGO36222 5 32107084 32170613 63530 Gain 3 0.897037 61 1058 chas 41.09 Gain 55.17 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "63530(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 41 - 0 "63530(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401135CS female "research_filter, clinical_filter" NQBM70678 3 173239853 173303341 63489 Gain 3 0.904285 56 1154 chas 78.41 Gain 78.39 Gain 0 - GainGain- 28 77.25 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "61185(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 28 NLGN1#asd_candidate 1 "63489(49|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400084DM female "research_filter, clinical_filter" JKIG25467 9 105764427 105827815 63389 Loss 1 0.904845 50 1293 chas 76.9 Loss 76.95 Loss 88.45 Loss LossLossLoss 48 91.45 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9q31.1 - CYLC2 1 CYLC2 1 - - - "63389(3|Conrad(2009),McKernan(2009),Shaikh(2009))" 245(1|Wang(2008)) - 48 - 0 "63389(14|Conrad(2009),Itsara(2009),McKernan(2009),Durbin(2010),Wang(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400645KM male "research_filter, clinical_filter" GTDY31038 12 31999647 32063002 63356 Gain 3 0.885078 58 1111 chas 0 - 97.92 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 12p11.21 - - 0 - 0 - - - "63356(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 63 - 0 "63356(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401860TJ male "research_filter, clinical_filter" DGQM75197 8 2127154 2190480 63327 Loss 1 0.910179 36 1809 chas 82.37 Loss 91.4 Loss 96.54 Loss LossLossLoss 49 79.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.3 - - 0 - 0 - - 17164(1|Pang(2010)) "63327(39|Sebat(2004),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Itsara(2009),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "1055(4|Wang(2008),Levy(2007),Matsuzaki(2009))" 16 49 - 0 "63327(81|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Wang(2007),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400518MS female "research_filter, clinical_filter" HARD47518 8 2127154 2190480 63327 Loss 1 0.909151 36 1809 chas 82.37 Loss 82.62 Loss 86.04 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - - 0 - 0 - - 17164(1|Pang(2010)) "63327(39|Sebat(2004),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Itsara(2009),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "1055(4|Wang(2008),Levy(2007),Matsuzaki(2009))" 16 49 - 0 "63327(81|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Wang(2007),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401397WN female "research_filter, clinical_filter" WGSV83254 8 2127154 2190480 63327 Loss 1 0.914631 36 1809 chas 82.37 Loss 91.4 Loss 91.41 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.3 - - 0 - 0 - - 17164(1|Pang(2010)) "63327(39|Sebat(2004),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Itsara(2009),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "1055(4|Wang(2008),Levy(2007),Matsuzaki(2009))" 16 49 - 0 "63327(81|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Wang(2007),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" QBLX62038 16 88190404 88253715 63312 Loss 1 0.882978 30 2183 chas 95.76 Loss 62.26 Loss 0 - LossLoss- 23 NA NA NA "ChAS,IPN,NXS" 16q24.2 - - 0 - 0 - - - - 687(2|Levy(2007)) 100 23 - 0 "63312(15|Pinto(2011),Kidd(2008),Levy(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401681MS female "research_filter, clinical_filter" IFUE20361 X 53556937 53620174 63238 Gain 3 0.884529 228 278 chas 67.1 Gain 0 - 0 - Gain-- 29 NA NA NA "ChAS,IPN" Xp11.22 - "MIRLET7F2,HUWE1,MIR98" 3 "MIRLET7F2,HUWE1,MIR98" 3 HUWE1 - - 63238(1|Korbel(2007)) - - 29 HUWE1#id_known 1 "63238(6|Korbel(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401834CB female "research_filter, clinical_filter" RMNM29531 5 59717731 59780947 63217 Gain 3 0.897701 88 726 chas 87.53 Gain 87.83 Gain 0 - GainGain- 38 80.04 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q12.1 - PDE4D 1 - 0 PDE4D - - "48842(3|Itsara(2009),Matsuzaki(2009),Shaikh(2009))" 203(1|Ahn(2009)) 3 38 - 0 "54083(7|Itsara(2009),Kidd(2008),Ahn(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401068SD female "research_filter, clinical_filter" THNQ55263 19 55283916 55347117 63202 Loss 1 0.895645 26 2528 chas 78.97 Loss 57.34 Loss 0 - LossLoss- 29 NA NA NA "ChAS,IPN,NXS" 19q13.42 - "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 "KIR3DL1,KIR2DL1,KIR2DS4,KIR2DL4" 4 KIR3DL1 - - "63202(47|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 29 - 0 "63202(112|Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400960TN female "research_filter, clinical_filter" RYUR49963 17 44213434 44276618 63185 Gain 3 0.916306 63 1019 chas 60.88 Gain 100 Gain 0 - GainGain- 63 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63185(1|Kidd(2008)) "63185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "63185(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400177SJ male "research_filter, clinical_filter" REUG17486 17 44213434 44276618 63185 Gain 3 0.906735 63 1019 chas 48.08 Gain 85.74 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63185(1|Kidd(2008)) "63185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "63185(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" PBNY43846 17 44213434 44276618 63185 Loss 1 0.855745 63 1019 chas 98.96 Loss 0 - 0 - Loss-- 63 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63185(1|Kidd(2008)) "63185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "63185(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400702PA female "research_filter, clinical_filter" OAGJ33866 17 44213434 44276618 63185 Gain 3 0.906806 63 1019 chas 100 Gain 60.89 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 63185(1|Kidd(2008)) "63185(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "63185(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" YCEN33630 16 12817663 12880845 63183 Loss 1 0.930874 92 694 chas 89.61 Loss 94.61 Loss 94.6 Loss LossLossLoss 63 89.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.12 - CPPED1 1 CPPED1 1 - - - 62926(2|Pinto(2007)) - - 63 - 0 "51808(2|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" VAOW46427 7 90103677 90166857 63181 Gain 3 0.907871 49 1316 chas 91.05 Gain 97.94 Gain 0 - GainGain- 50 91.46 Gain "BS,IP6" "ChAS,IPN,NXS" 7q21.13 - - 0 - 0 - - - "63181(2|Conrad(2009),Shaikh(2009))" - 2 50 - 0 "63181(5|Itsara(2009),Conrad(2009),Jakobsson(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400528LR male research_filter IFUE20361 7 142828544 142891708 63165 Loss 1 0.932992 81 789 chas 100 Loss 100 Loss 100 Loss LossLossLoss 32 NA NA NA "ChAS,IPN,NXS,PTK" 7q34 - "PIP,TAS2R39" 2 "PIP,TAS2R39" 2 - - - "54814(7|de Smith(2007),Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - - 32 - 0 "63165(9|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401834CB female "research_filter, clinical_filter" HAGL80690 6 78972075 79035172 63098 Loss 1 0.885199 22 3004 chas 100 Loss 0 - 0 - Loss-- 107 100 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "63098(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "63098(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400542EG female research_filter PQCI84759 6 78972075 79035172 63098 Loss 1 0.896553 22 3004 chas 100 Loss 0 - 0 - Loss-- 107 100 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "63098(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "63098(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400076LC female research_filter THKF48028 6 78972075 79035172 63098 Loss 1 0.899115 22 3004 chas 100 Loss 0 - 0 - Loss-- 107 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "63098(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "63098(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400601WC female research_filter XBAT84080 6 78972075 79035161 63087 Loss 1 0.884597 21 3154 chas 100 Loss 0 - 0 - Loss-- 106 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "63087(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "63087(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400186WC female research_filter AMDW97336 14 106868273 106931338 63066 Gain 3 0.888892 37 1751 chas 13.76 Gain 58.1 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - 1174(1|Ahn(2009)) "63066(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "2265(6|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 5 61 - 0 "63066(216|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401281BP male research_filter EXZC47846 22 42892569 42955616 63048 Loss 1 0.916877 20 3318 chas 40.11 Loss 66.01 Loss 71.82 Loss LossLossLoss 32 80.97 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 22q13.2 - "SERHL2,RRP7A,SERHL" 3 "SERHL2,RRP7A,SERHL" 3 - - - "63048(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "549(5|Wheeler(2008),Matsuzaki(2009))" 62 32 - 0 "63048(87|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400468OB female research_filter ICZT95489 22 42892569 42955616 63048 Loss 1 0.898178 20 3318 chas 36.02 Loss 57.34 Loss 56.82 Loss LossLossLoss 32 NA NA NA "ChAS,IPN,NXS,PTK" 22q13.2 - "SERHL2,RRP7A,SERHL" 3 "SERHL2,RRP7A,SERHL" 3 - - - "63048(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "549(5|Wheeler(2008),Matsuzaki(2009))" 62 32 - 0 "63048(87|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401386WA male research_filter GUZB61909 22 42892569 42955616 63048 Gain 4 0.930502 20 3318 chas 40.11 Gain 88.55 Gain 52.74 Gain GainGainGain 32 67.05 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 22q13.2 - "SERHL2,RRP7A,SERHL" 3 "SERHL2,RRP7A,SERHL" 3 - - - "63048(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" "549(5|Wheeler(2008),Matsuzaki(2009))" 62 32 - 0 "63048(87|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401029SD_1 female research_filter PYHX78792 14 106868273 106931309 63037 Gain 3 0.896231 36 1801 chas 25.63 Gain 46.89 Gain 0 - GainGain- 61 0 - - "ChAS,IPN,NXS" 14q32.33 - - 0 - 0 - - 1174(1|Ahn(2009)) "63037(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "2265(6|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 5 61 - 0 "63037(216|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 401799DP male research_filter NFIA96453 14 106868273 106931309 63037 Gain 3 0.900725 36 1801 chas 10.25 Gain 0 - 0 - Gain-- 61 13.93 Gain IP6 "ChAS,IPN" 14q32.33 - - 0 - 0 - - 1174(1|Ahn(2009)) "63037(58|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Pang(2010),Itsara(2009),Shaikh(2009),Park(2010),McCarroll(2005),Kidd(2008),Simon-Sanchez(2007))" "2265(6|Conrad(2009),Bentley(2008),Matsuzaki(2009),Mills(2006))" 5 61 - 0 "63037(216|Conrad(2009),Ahn(2009),Korbel(2007),Wang(2007),Itsara(2009),McKernan(2009),Iafrate(2004),Durbin(2010),McCarroll(2006),Pang(2010),Kidd(2008),Wong(2007),Simon-Sanchez(2007),Sebat(2004),Campbell(2011),Park(2010),Bentley(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400069CN female research_filter NBJX82400 19 45688633 45751657 63025 Loss 1 0.902336 10 7002 chas 0 - 0 - 0 - --- 22 0 - - ChAS 19q13.32 - EXOC3L2 1 EXOC3L2 1 - - - "63025(3|Conrad(2009),Levy(2007),Simon-Sanchez(2007))" 1(1|Levy(2007)) - 22 - 0 "63025(13|Conrad(2009),Wong(2007),Durbin(2010),Wilson(2010),Pinto(2011),Simon-Sanchez(2007))" FALSE TRUE ipn_no algo_no affy6_no 400014SL female - XMAJ27378 17 44213637 44276618 62982 Loss 1 0.858334 62 1032 chas 99.27 Loss 0 - 0 - Loss-- 63 99.18 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401100SJ female "research_filter, clinical_filter" GTRU40344 17 44213637 44276618 62982 Gain 3 0.905487 62 1032 chas 100 Gain 63.03 Gain 0 - GainGain- 63 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400134WK_1 male "research_filter, clinical_filter" PAGW82790 17 44213637 44276618 62982 Loss 1 0.858392 62 1032 chas 99.27 Loss 0 - 0 - Loss-- 63 97.28 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" DWHI65488 17 44213637 44276618 62982 Gain 3 0.90031 62 1032 chas 100 Gain 65.09 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400135DR male "research_filter, clinical_filter" GVAB34760 17 44213637 44276618 62982 Gain 3 0.899005 62 1032 chas 100 Gain 100 Gain 0 - GainGain- 63 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" APGE11753 17 44213637 44276618 62982 Gain 3 0.910366 62 1032 chas 0 - 98.05 Gain 0 - -Gain- 63 NA NA NA "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62982(1|Kidd(2008)) "62982(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 63 - 0 "62982(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 401017SC female "research_filter, clinical_filter" ILTL12466 2 78736540 78799458 62919 Loss 1 0.91318 39 1655 chas 80.39 Loss 87.02 Loss 87.03 Loss LossLossLoss 34 84.65 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - - "503(3|Wang(2008),Bentley(2008))" - 34 - 0 "62919(21|Itsara(2009),Wang(2008),Durbin(2010),Shaikh(2009),Bentley(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400124FR male "research_filter, clinical_filter" GAAC71530 3 104023849 104086715 62867 Loss 1 0.898788 28 2328 chas 72.37 Loss 82.38 Loss 0 - LossLoss- 27 86.13 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 3q13.11 - - 0 - 0 - - - "11804(3|Conrad(2009),Perry(2008),Ju(2010))" - - 27 - 0 "62867(19|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_yes 400506GN female "research_filter, clinical_filter" QKSF16477 Y 25555661 25618468 62808 Gain 2 0.852691 71 897 chas 59.87 Gain 0 - 0 - Gain-- 24 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "62808#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "62808(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "62808(4|McCarroll(2008),Durbin(2010),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" BOER26307 10 51840971 51903756 62786 Loss 1 0.896376 17 3924 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "62786(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "62786(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400571WV female - BMGG13461 10 51840972 51903756 62785 Loss 1 0.886109 16 4185 chas 0 - 0 - 0 - --- 6 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "62785(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "62785(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400002HK female - JTJC66263 10 51840972 51903756 62785 Loss 1 0.901131 16 4185 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "62785(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "62785(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400122PL male - WNMH95182 10 51840972 51903756 62785 Loss 1 0.893641 16 4185 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "62785(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "62785(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401302LJ male - NBLH72263 10 51840972 51903756 62785 Loss 1 0.886118 16 4185 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "62785(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 5 - 0 "62785(20|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401532LJ female - LCVR91256 7 38293950 38356732 62783 Gain 3 0.893822 82 775 chas 0 - 40.34 Gain 97.49 Gain #NAME? 92 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "62783(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 39 92 - 0 "62783(54|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401510DG male "research_filter, clinical_filter" YOPA81411 2 137792771 137855545 62775 Gain 3 0.901367 70 909 chas 89.08 Gain 89.91 Gain 0 - GainGain- 43 NA NA NA "ChAS,IPN,NXS" 2q22.1 - THSD7B 1 THSD7B 1 - - - - - - 43 - 0 "62775(5|Itsara(2009),Kidd(2008),Durbin(2010),Shaikh(2009),Teague(2010))" TRUE TRUE ipn_yes algo_yes NA 402056KD male "research_filter, clinical_filter" EDMQ40540 Y 24138242 24200918 62677 Gain 2 0.847851 152 415 chas 9.41 Gain 0 - 0 - Gain-- 1 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "62677#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 62677(2|Matsuzaki(2009)) - 100 1 - 0 "62677(3|Locke(2006),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401589HP male "research_filter, clinical_filter" KMMD77027 8 5485698 5548365 62668 Loss 1 0.910817 78 813 chas 100 Loss 100 Loss 100 Loss LossLossLoss 112 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.2 - - 0 - 0 - - - "62668(9|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),Kim(2009),Simon-Sanchez(2007))" "914(2|Ahn(2009),Perry(2008))" - 112 - 0 "62668(20|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400783MJ male "research_filter, clinical_filter" JGYN82468 20 41223356 41285978 62623 Loss 1 0.922204 124 509 chas 100 Loss 100 Loss 100 Loss LossLossLoss 101 NA NA NA "ChAS,IPN,NXS,PTK" 20q12 - PTPRT 1 - 0 - - - "55011(8|Wang(2007),Pinto(2007),Redon(2006),Matsuzaki(2009),Shaikh(2009))" - - 101 - 0 "62623(18|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" JUSU56143 17 44225821 44288442 62622 Loss 1 0.857977 49 1304 chas 100 Loss 53.8 Loss 0 - LossLoss- 57 0 - - "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62622(1|Kidd(2008)) "62622(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) 11 57 - 0 "62622(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400743LS female "research_filter, clinical_filter" PVOR72227 X 143502005 143564589 62585 Loss 1 0.904201 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400870KC female - FCXX78522 X 143502005 143564589 62585 Loss 0 0.839668 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401117GM male - EXZC47846 X 143502005 143564589 62585 Loss 1 0.914404 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400468OB female - JFSR33951 X 143502005 143564589 62585 Loss 1 0.903874 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400444MM female - MAKG95944 X 143502005 143564589 62585 Loss 0 0.821806 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400041LJ male - JUBF84215 X 143502005 143564589 62585 Loss 1 0.914796 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400066MA female - AYLS39762 X 143502005 143564589 62585 Loss 1 0.881268 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400663MD female - RSYQ67471 X 143502005 143564589 62585 Loss 0 0.818169 8 8940 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400624RJ male - UOXQ52793 X 143502005 143564589 62585 Loss 1 0.90861 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400791GC female - IFUE20361 X 143502005 143564589 62585 Loss 1 0.896102 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401834CB female - XUUY89365 X 143502005 143564589 62585 Loss 1 0.898472 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400846MC female - NUMT67226 X 143502005 143564589 62585 Loss 1 0.932241 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401079HJ female - TZSA84286 X 143502005 143564589 62585 Loss 1 0.907909 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401166WJ female - IDKP47812 X 143502005 143564589 62585 Loss 0 0.822394 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401377MA male - RBTV68848 X 143502005 143564589 62585 Loss 0 0.846906 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401182OC male - RAQB29487 X 143502005 143564589 62585 Loss 0 0.823516 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401746WW male - KGUZ66103 X 143502005 143564589 62585 Loss 0 0.834989 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401596PJ male - PNEQ37885 X 143502005 143564589 62585 Loss 0 0.829663 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401781SL male - OTMU34006 X 143502005 143564589 62585 Loss 0 0.83688 8 8940 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS Xq27.3 50001(1|contig) - 0 - 0 - - - - - - 8 - 0 2050(1|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 402038MR male - FNMA81925 X 103261175 103323758 62584 Gain 3 0.979966 66 962 chas 70.22 Gain 0 - 0 - Gain-- 58 99.79 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFXP,H2BFM" 4 "H2BFWT,H2BFXP,H2BFM" 3 - - "62584(6|Pang(2010),Kidd(2008),Tuzun(2005))" "62584(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 32 58 - 0 "62584(20|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400171BJ male "research_filter, clinical_filter" WHSN55625 10 48117190 48179757 62568 Loss 1 0.873603 9 7821 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401354KM male - NZSQ74406 10 48117190 48179757 62568 Loss 1 0.885242 9 7821 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400191MP_1 male - ROAF64821 10 48117190 48179757 62568 Loss 1 0.88181 9 7821 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401870FB male - TDHB82208 10 48117190 48179757 62568 Loss 1 0.870861 9 7821 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400923OA female - EIKI77114 10 48117190 48179757 62568 Loss 1 0.886984 9 7821 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401221LD female - XZZR64566 10 48117190 48179757 62568 Loss 1 0.903987 9 7821 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400996MC male - KQIO31508 10 48117190 48179757 62568 Loss 1 0.887074 9 7821 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "62568(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "62568(53|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Wong(2007),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400507VD male - QCXI89270 12 173787 236348 62562 Loss 1 0.934707 56 1137 chas 86.52 Loss 98.39 Loss 98.38 Loss LossLossLoss 34 96.67 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.33 - IQSEC3 1 IQSEC3 1 - - - "62562(15|Conrad(2009),Jakobsson(2008),Perry(2008),Matsuzaki(2009),Ju(2010),Park(2010))" 1(1|Levy(2007)) 23 34 - 0 "62562(25|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Ju(2010),Itsara(2009),Durbin(2010),Kidd(2008),Perry(2008b),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400558BL female "research_filter, clinical_filter" TLUO25428 14 38629953 38692493 62541 Gain 3 0.893523 84 753 chas 64.23 Gain 91.2 Gain 0 - GainGain- 52 NA NA NA "ChAS,IPN,NXS" 14q21.1 - SSTR1 1 SSTR1 1 - - - - "748(3|Wang(2008),Ahn(2009),Mills(2006))" - 52 - 0 "62541(15|Itsara(2009),Ahn(2009),Wong(2007),Wang(2008),Durbin(2010),Kidd(2008),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401836SI female "research_filter, clinical_filter" NKHQ61532 17 44214094 44276618 62525 Loss 1 0.853966 61 1042 chas 100 Loss 0 - 0 - Loss-- 62 100 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62525(1|Kidd(2008)) "62525(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 62 - 0 "62525(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" IJCH39724 17 44214094 44276618 62525 Loss 1 0.866174 61 1042 chas 100 Loss 0 - 0 - Loss-- 62 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62525(1|Kidd(2008)) "62525(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 62 - 0 "62525(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401571SD male "research_filter, clinical_filter" SXNO44692 17 44214094 44276618 62525 Gain 3 0.905852 61 1042 chas 100 Gain 99.5 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 62525(1|Kidd(2008)) "62525(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 62 - 0 "62525(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401949MN male "research_filter, clinical_filter" YREU97751 15 23620192 23682708 62517 Loss 1 0.882353 44 1453 chas 81.12 Loss 0 - 82.03 Loss Loss-Loss 15 NA NA NA "ChAS,IPN,PTK" 15q11.2 - - 0 - 0 - "62517#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "62517(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 15 - 0 "62517(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401478RD male "research_filter, clinical_filter" OWWC21327 15 23620192 23682708 62517 Loss 1 0.895819 44 1453 chas 81.12 Loss 81.22 Loss 0 - LossLoss- 15 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "62517#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "62517(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 15 - 0 "62517(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400547BS female "research_filter, clinical_filter" IZPX82976 15 23620192 23682708 62517 Loss 1 0.892354 44 1453 chas 81.12 Loss 76.8 Loss 0 - LossLoss- 15 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "62517#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "62517(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 15 - 0 "62517(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401693RC male "research_filter, clinical_filter" WYNE83745 15 23620192 23682708 62517 Loss 1 0.900133 44 1453 chas 81.12 Loss 66.5 Loss 0 - LossLoss- 15 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "62517#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "62517(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 15 - 0 "62517(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401844ZD male "research_filter, clinical_filter" PCKY38343 15 23620192 23682708 62517 Loss 1 0.890988 44 1453 chas 81.12 Loss 82.03 Loss 0 - LossLoss- 15 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "62517#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "62517(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 15 - 0 "62517(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400127MD male "research_filter, clinical_filter" KNEY83753 5 177143920 177206427 62508 Loss 1 0.875635 8 8929 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "62508#1%""Sotos syndrome"":2326144" - "62508(5|de Smith(2007),Kidd(2008),McCarroll(2008),Shaikh(2009),Conrad(2009))" - 100 7 - 0 "62508(19|Teague(2010),Conrad(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400411TG male - UAVX81306 5 12677219 12739595 62377 Loss 1 0.919421 92 685 chas 99.84 Loss 99.93 Loss 99.93 Loss LossLossLoss 23 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.2 - TAG 1 TAG 1 - - - "62377(4|Park(2010),Kidd(2008),Shaikh(2009),Conrad(2009))" - - 23 - 0 "62377(17|Conrad(2009),Wong(2007),Teague(2010),Itsara(2009),Durbin(2010),Kidd(2010),Kidd(2008),Perry(2008b),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400643LD male "research_filter, clinical_filter" BNID76344 10 117253333 117315566 62234 Loss 1 0.935384 80 787 chas 91.11 Loss 95.55 Loss 95.55 Loss LossLossLoss 42 90.91 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q25.3 - ATRNL1 1 ATRNL1 1 - - - - 605(1|Park(2010)) - 42 - 0 "62234(5|Park(2010),Kidd(2008),Pinto(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" QBXB16173 4 81549372 81611552 62181 Gain 3 0.902408 74 851 chas 100 Gain 95.47 Gain 100 Gain GainGainGain 42 NA NA NA "ChAS,IPN,NXS,PTK" 4q21.21 - C4orf22 1 - 0 - - - 1168(1|McKernan(2009)) - 7 42 - 0 "62181(4|McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" WUVU37744 X 49823802 49885980 62179 Gain 2 0.938284 168 372 chas 99.98 Gain 0 - 0 - Gain-- 31 99.87 Gain "BS,GTC,IP6" "ChAS,IPN" Xp11.22 - CLCN5 1 CLCN5 1 CLCN5 - - - - - 31 - 0 86(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" GLGF34868 6 254254 316401 62148 Loss 1 0.875109 100 627 chas 60.92 Loss 12.25 Loss 0 - LossLoss- 37 NA NA NA "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "62148(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 37 - 0 "62148(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401268PS male "research_filter, clinical_filter" GTRU40344 6 254254 316401 62148 Gain 3 0.874379 100 627 chas 0 - 66.76 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "62148(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 37 - 0 "62148(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_no 400134WK_1 male "research_filter, clinical_filter" SFLX52247 6 254254 316401 62148 Gain 3 0.877737 100 627 chas 0 - 62.42 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "62148(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 37 - 0 "62148(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401640WJ male "research_filter, clinical_filter" ZBJH32901 16 71999744 72061832 62089 Loss 1 0.935556 104 602 chas 99.98 Loss 98.37 Loss 98 Loss LossLossLoss 59 NA NA NA "ChAS,IPN,NXS,PTK" 16q22.2 - "DHODH,PKD1L3" 2 "DHODH,PKD1L3" 2 DHODH - - "2453(2|Shaikh(2009),Mills(2006))" - 2 59 - 0 "62089(9|Wong(2007),Redon(2006),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401900RJ female "research_filter, clinical_filter" IDTW13637 5 13143321 13205408 62088 Gain 3 0.905573 52 1217 chas 92.19 Gain 94.9 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 5p15.2 - - 0 - 0 - - - "60727(4|Wang(2007),Redon(2006),Perry(2008))" - - 23 - 0 "62088(12|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Conrad(2006),Durbin(2010),Cooper(2008))" TRUE TRUE ipn_yes algo_yes NA 401687LR male "research_filter, clinical_filter" LETQ64470 5 152251102 152313158 62057 Loss 1 0.945183 32 2001 chas 85.46 Loss 85.01 Loss 92.72 Loss LossLossLoss 29 95.04 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q33.1 - - 0 - 0 - - - 639(1|Matsuzaki(2009)) - - 29 - 0 5225(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" QPLK48897 10 46996854 47058855 62002 Gain 3 0.877536 59 1069 chas 0 - 97.85 Gain 0 - -Gain- 27 NA NA NA "ChAS,NXS" 10q11.22 - GPRIN2 1 GPRIN2 1 - - "48537(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "62002(31|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 26 - 0 "62002(188|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_yes NA 401730MS male "research_filter, clinical_filter" UOXQ52793 6 257340 319315 61976 Loss 1 0.868821 98 638 chas 60.64 Loss 0 - 0 - Loss-- 36 NA NA NA "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "61976(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 36 - 0 "61976(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400791GC female "research_filter, clinical_filter" RVIS81666 17 44214722 44276618 61897 Loss 1 0.865121 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 100 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" WHSN55625 17 44214722 44276618 61897 Loss 1 0.864277 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 92.19 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" JSIF57066 17 44214722 44276618 61897 Loss 1 0.867083 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400512LR female "research_filter, clinical_filter" EFCN47469 17 44214722 44276618 61897 Loss 1 0.855244 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400483DP male "research_filter, clinical_filter" XPRZ52054 17 44214722 44276618 61897 Loss 1 0.856019 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400611GG male "research_filter, clinical_filter" ISXJ62958 17 44214722 44276618 61897 Loss 1 0.882348 60 1049 chas 35.88 Loss 0 - 0 - Loss-- 61 0 - - "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 401956DQ male "research_filter, clinical_filter" NEPL50430 17 44214722 44276618 61897 Loss 1 0.860234 60 1049 chas 35.88 Loss 0 - 0 - Loss-- 61 100 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401084BD male "research_filter, clinical_filter" RDBP35321 17 44214722 44276618 61897 Loss 1 0.861733 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400773GS male "research_filter, clinical_filter" VSHC86133 17 44214722 44276618 61897 Loss 1 0.86997 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400347VJ male "research_filter, clinical_filter" DZVA59681 17 44214722 44276618 61897 Loss 1 0.895209 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400606HW male "research_filter, clinical_filter" BYSK29073 17 44214722 44276618 61897 Loss 1 0.86751 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" NJBJ54022 17 44214722 44276618 61897 Loss 1 0.873727 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401066MM female "research_filter, clinical_filter" SXXB40252 17 44214722 44276618 61897 Loss 1 0.86697 60 1049 chas 100 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401495NR male "research_filter, clinical_filter" YDLH53232 17 44214722 44276618 61897 Loss 1 0.86408 60 1049 chas 35.88 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61897(1|Kidd(2008)) "61897(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61897(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401691HA male "research_filter, clinical_filter" CORE80412 20 41181630 41243486 61857 Loss 1 0.937371 92 679 chas 100 Loss 99.91 Loss 99.9 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 20q12 - PTPRT 1 - 0 - - - "61857(2|Pinto(2007),Shaikh(2009))" - - 66 - 0 "61857(9|Itsara(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400581VJ female "research_filter, clinical_filter" TQQL83388 15 23625785 23687628 61844 Loss 1 0.891486 43 1472 chas 86.4 Loss 60.01 Loss 73.88 Loss LossLossLoss 15 60.85 Loss IP6 "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "61844#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "61844(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" "1538(7|Wang(2008),Levy(2007),Ahn(2009),Matsuzaki(2009))" 99 15 - 0 "61844(42|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Wang(2008),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" HAGL80690 5 179443190 179505020 61831 Loss 1 0.924718 64 981 chas 90.71 Loss 95.18 Loss 95.17 Loss LossLossLoss 39 90.64 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - RNF130 1 RNF130 1 - - - - - - 39 - 0 "61831(5|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" TLUK35377 17 44214816 44276618 61803 Loss 1 0.869842 59 1065 chas 100 Loss 0 - 0 - Loss-- 61 99.89 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61803(1|Kidd(2008)) "61803(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61803(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" IBGK33359 3 96285128 96346896 61769 Loss 1 0.878564 40 1583 chas 16.68 Loss 31.4 Loss 0 - LossLoss- 32 NA NA NA "ChAS,IPN,NXS" 3q11.2 - - 0 - 0 - - - 13877(2|Shaikh(2009)) "691(6|Levy(2007),Matsuzaki(2009))" 4 32 - 0 "61769(8|Levy(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" HBQS50118 7 38294983 38356732 61750 Gain 3 0.875299 80 781 chas 0 - 35.37 Gain 0 - -Gain- 90 0 - - "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "61750(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 38 90 - 0 "61750(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400205SP_1 male "research_filter, clinical_filter" VYEA28313 7 38294983 38356732 61750 Gain 3 0.872776 80 781 chas 0 - 9.03 Gain 0 - -Gain- 90 0 - - "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "61750(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 38 90 - 0 "61750(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_no 400983PV female "research_filter, clinical_filter" QKZI23426 7 38294983 38356732 61750 Gain 3 0.88492 80 781 chas 0 - 30.44 Gain 0 - -Gain- 90 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "61750(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 38 90 - 0 "61750(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400943DV female "research_filter, clinical_filter" GHOG89686 7 38294983 38356732 61750 Gain 3 0.873683 80 781 chas 0 - 0 - 0 - --- 90 NA NA NA ChAS 7p14.1 - TARP 1 TARP 1 - - - "61750(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 38 90 - 0 "61750(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 401459HF male clinical_filter VZJA70154 17 44214888 44276618 61731 Loss 1 0.869673 58 1083 chas 100 Loss 0 - 0 - Loss-- 61 100 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61731(1|Kidd(2008)) "61731(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61731(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401427CB male "research_filter, clinical_filter" ZGTI52802 17 44214888 44276618 61731 Loss 1 0.860155 58 1083 chas 35.97 Loss 0 - 0 - Loss-- 61 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61731(1|Kidd(2008)) "61731(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 61 - 0 "61731(218|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" SURU67526 X 53782898 53844604 61707 Gain 3 0.899922 36 1763 chas 51.58 Gain 0 - 0 - Gain-- 34 NA NA NA "ChAS,IPN" Xp11.22 - - 0 - 0 - - - 61707(1|Korbel(2007)) - 19 33 - 0 "61707(5|Teague(2010),Korbel(2007),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400675HC female research_filter WDRZ91881 7 38293950 38355647 61698 Loss 1 0.88395 80 780 chas 0 - 80.5 Loss 97.45 Loss #NAME? 89 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "61698(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 39 89 - 0 "61698(54|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 401426WD male "research_filter, clinical_filter" DQHB62647 5 49481045 49542697 61653 Loss 1 0.926678 10 6850 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5q11.1 - - 0 - 0 - - - "61653(4|Conrad(2009),McKernan(2009),Ju(2010))" - - 7 - 0 "61653(23|Conrad(2009),McKernan(2009),Wong(2007),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401732HW male - TCTA60809 X 56457792 56519402 61611 Gain 3 0.908958 22 2933 chas 69.95 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Xp11.21 - - 0 - 0 - - - 4313(1|Shaikh(2009)) - - 27 - 0 4313(1|Shaikh(2009)) FALSE TRUE ipn_yes algo_yes NA 401965TG female research_filter OUAW94182 8 99545492 99607092 61601 Loss 1 0.910875 64 977 chas 98.35 Loss 99.14 Loss 99.14 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 8q22.2 - STK3 1 STK3 1 - - - - - 8 30 STK3#asd_candidate 1 - TRUE TRUE ipn_yes algo_yes NA 402063WM female "research_filter, clinical_filter" OCVA11195 10 51830347 51891907 61561 Loss 1 0.920961 18 3621 chas 0 - 0 - 100 Loss #NAME? 4 NA NA NA "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401358VP male research_filter ICZT95489 10 51830347 51891907 61561 Loss 1 0.922401 18 3621 chas 0 - 0 - 100 Loss #NAME? 4 NA NA NA "ChAS,PTK" 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401386WA male research_filter WVDE74465 10 51830347 51891907 61561 Loss 1 0.899618 18 3621 chas 0 - 0 - 0 - --- 4 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401838EN male - AYLS39762 10 51830347 51891907 61561 Loss 1 0.92386 18 3621 chas 0 - 0 - 0 - --- 4 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400663MD female - YMTT86375 10 51830347 51891907 61561 Loss 1 0.896451 18 3621 chas 0 - 0 - 0 - --- 4 0 - - ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400797ST male - MOBN67062 10 51830347 51891907 61561 Loss 1 0.90567 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400569WC female - OUAW94182 10 51830347 51891907 61561 Loss 1 0.900128 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402063WM female - GBOO31083 10 51830347 51891907 61561 Loss 1 0.891417 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400282RA female - LHVX52107 10 51830347 51891907 61561 Loss 1 0.886961 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401341TS female - JKGU55742 10 51830347 51891907 61561 Loss 1 0.931978 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400880TM male - TGHP62000 10 51830347 51891907 61561 Loss 1 0.908861 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400882DD male - WTDT99871 10 51830347 51891907 61561 Loss 1 0.914875 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401505WI male - TDDJ68763 10 51830347 51891907 61561 Loss 1 0.918089 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401250WD female - QRSF74396 10 51830347 51891907 61561 Loss 1 0.911871 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401500OM male - WXKO33327 10 51830347 51891907 61561 Loss 1 0.894482 18 3621 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 10q11.23 - "FAM21B,FAM21A" 2 "FAM21B,FAM21A" 2 - - - "61561(6|Park(2010),Conrad(2009),Matsuzaki(2009))" - 100 4 - 0 "61561(18|Conrad(2009),Wong(2007),Redon(2006),Alkan(2009),Durbin(2010),Park(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400496BL female - IREV30826 5 177166127 177227553 61427 Loss 1 0.949543 10 6825 chas 0 - 92.81 Loss 0 - -Loss- 5 NA NA NA "ChAS,NXS" 5q35.3 - FAM153A 1 FAM153A 1 - "61427#1%""Sotos syndrome"":2326144" - "61427(8|Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" - 100 5 - 0 "61427(23|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401413RG male research_filter JSXF59945 X 76317234 76378644 61411 Gain 3 0.87909 27 2361 chas 0 - 0 - 0 - --- 11 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 2 10 - 0 61411(12|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401863BD_1 female - NKHQ61532 1 248176594 248237962 61369 Gain 3 0.894347 68 915 chas 62.11 Gain 100 Gain 0 - GainGain- 37 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 1q44 - "OR2L13,OR2L2,OR2L3" 3 "OR2L2,OR2L3" 2 - - - "61369(9|Redon(2006),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pinto(2007),Shaikh(2009))" "677(3|Wang(2008),Wheeler(2008),Bentley(2008))" 1 37 - 0 "61369(25|Redon(2006),Wang(2008),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2007),Pinto(2011),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400588BE female "research_filter, clinical_filter" GEZQ95890 6 29874680 29936041 61362 Loss 1 0.895759 28 2272 chas 40.69 Loss 0 - 0 - Loss-- 47 75.7 "Gain,Loss" "BS,IP6" "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "61362(52|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 30 47 - 0 "61362(330|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" YDUL84017 6 29874680 29936041 61362 Loss 1 0.888119 28 2272 chas 17.75 Loss 0 - 0 - Loss-- 47 75.7 "Gain,Loss" "BS,IP6" "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "61362(52|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 30 47 - 0 "61362(330|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400626FC female "research_filter, clinical_filter" PBCS27067 6 29874680 29936041 61362 Loss 1 0.874575 28 2272 chas 36.8 Loss 0 - 0 - Loss-- 47 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "61362(52|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 30 47 - 0 "61362(330|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" XUUY89365 6 29874680 29936041 61362 Loss 1 0.884579 28 2272 chas 43.83 Loss 0 - 0 - Loss-- 47 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "61362(52|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 30 47 - 0 "61362(330|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" FSLR52955 6 29874680 29936041 61362 Loss 1 0.883095 28 2272 chas 75.69 Loss 0 - 0 - Loss-- 47 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "61362(52|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),McCarroll(2005),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 30 47 - 0 "61362(330|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Perry(2008b),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" QMCQ87044 12 32002283 32063640 61358 Gain 3 0.902724 59 1057 chas 98.96 Gain 99.86 Gain 0 - GainGain- 61 98.96 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "61358(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 61 - 0 "61358(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400152MR male "research_filter, clinical_filter" GDLU88739 2 130817326 130878657 61332 Loss 1 0.884303 24 2666 chas 0 - 67.63 Loss 93.63 Loss #NAME? 15 NA NA NA "ChAS,NXS,PTK" 2q21.1 - POTEF 1 POTEF 1 - - - "61332(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 15 - 0 "61332(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400268SY female research_filter ZVON68408 2 130817326 130878657 61332 Loss 1 0.876708 24 2666 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "61332(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 15 - 0 "61332(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400688FL female - RCQQ88896 16 1066423 1127714 61292 Loss 1 0.887887 10 6810 chas 0 - 0 - 0 - --- 12 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61292(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 12 - 0 "61292(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400315DA_1 male - GNXG93257 1 147933973 147995251 61279 Loss 1 0.873746 12 5570 chas 0 - 0 - 0 - --- 0 0 - - ChAS 1q21.2 - "PPIAL4A,PPIAL4B" 2 "PPIAL4A,PPIAL4B" 2 - - - "61279(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "61279(85|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400108BJ female - MAKG95944 1 147933973 147995251 61279 Loss 1 0.871908 12 5570 chas 0 - 0 - 0 - --- 0 0 - - ChAS 1q21.2 - "PPIAL4A,PPIAL4B" 2 "PPIAL4A,PPIAL4B" 2 - - - "61279(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "61279(85|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400041LJ male - NVDU55912 1 147933973 147995251 61279 Loss 1 0.894829 12 5570 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B" 2 "PPIAL4A,PPIAL4B" 2 - - - "61279(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "61279(85|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401307VR male - VBTG63612 1 147933973 147995251 61279 Loss 1 0.871476 12 5570 chas 0 - 0 - 0 - --- 0 NA NA NA ChAS 1q21.2 - "PPIAL4A,PPIAL4B" 2 "PPIAL4A,PPIAL4B" 2 - - - "61279(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Wheeler(2008),Shaikh(2009),Zogopoulos(2007))" - 100 0 - 0 "61279(85|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401550SP female - BQFC38547 17 44215351 44276618 61268 Loss 1 0.868874 57 1094 chas 100 Loss 0 - 0 - Loss-- 60 100 Loss GTC "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61268(1|Kidd(2008)) "61268(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 60 - 0 "61268(216|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400238BB female "research_filter, clinical_filter" APOV19283 17 44215351 44276618 61268 Loss 1 0.874822 57 1094 chas 36.24 Loss 0 - 0 - Loss-- 60 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 61268(1|Kidd(2008)) "61268(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "1107(2|Conrad(2009),Wheeler(2008))" - 60 - 0 "61268(216|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" HDQS55514 7 33128225 33189478 61254 Gain 3 0.898355 78 795 chas 77.34 Gain 96.74 Gain 0 - GainGain- 35 88.42 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 7p14.3 - "RP9,BBS9" 2 "RP9,BBS9" 2 "RP9,BBS9" - - "57750(6|Conrad(2009),Ahn(2009),Itsara(2009),Park(2010),Kim(2009),Shaikh(2009))" 646(1|Park(2010)) - 35 - 0 "61254(43|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Wong(2007),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400653GP male "research_filter, clinical_filter" ZKCL87954 12 32002400 32063640 61241 Gain 3 0.896049 58 1074 chas 70.42 Gain 99.86 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "61241(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 60 - 0 "61241(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401698SB male "research_filter, clinical_filter" YSLM40888 14 100357856 100419086 61231 Gain 3 0.905517 73 850 chas 96.34 Gain 100 Gain 0 - GainGain- 45 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 14q32.2 - EML1 1 EML1 1 - - - 5799(4|Matsuzaki(2009)) "2407(9|Levy(2007),McKernan(2009),Matsuzaki(2009),Bentley(2008))" - 45 - 0 "61231(22|Wong(2007),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400460DM female "research_filter, clinical_filter" MWRB65708 X 120009892 120071106 61215 Loss 1 0.915709 11 6121 chas 0 - 0 - 0 - --- 0 0 - - ChAS Xq24 50001(1|clone) "CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 11 "CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,CT47A9,CT47A8,CT47A12,CT47A11,CT47A10" 11 - - - "61215(7|Kidd(2008),Conrad(2009),Ju(2010),Perry(2008),Tuzun(2005))" - 18 0 - 0 "61215(8|Conrad(2009),Perry(2008),Ju(2010),Durbin(2010),Kidd(2008),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400267GD female - IZZO20602 11 55374019 55435179 61161 Loss 1 0.851343 68 912 chas 99.98 Loss 0 - 0 - Loss-- 46 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "60117(2|Kidd(2008),Korbel(2007))" "61161(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 46 - 0 "61161(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" EHXC97365 11 55374019 55435179 61161 Loss 1 0.883823 68 912 chas 99.98 Loss 44.72 Loss 54.76 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "60117(2|Kidd(2008),Korbel(2007))" "61161(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 46 - 0 "61161(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" SRJV59260 1 105106197 105167298 61102 Loss 1 0.902102 56 1110 chas 85.29 Loss 100 Loss 100 Loss LossLossLoss 29 95.4 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p21.1 - - 0 - 0 - - - - 1(1|Levy(2007)) - 29 - 0 14131(5|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" QCXI89270 16 1066253 1127329 61077 Loss 1 0.892251 12 5552 chas 0 - 0 - 0 - --- 13 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400558BL female - LFNU24334 16 1066253 1127329 61077 Loss 1 0.89538 12 5552 chas 0 - 0 - 0 - --- 13 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400471YS male - NVMX58254 16 1066253 1127329 61077 Loss 1 0.896585 12 5552 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 402060PD female - THNQ55263 16 1066253 1127329 61077 Loss 1 0.893192 12 5552 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400960TN female - UBKP24592 16 1066253 1127329 61077 Loss 1 0.89755 12 5552 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401513KC male - FCFF79727 16 1066253 1127329 61077 Loss 1 0.889005 12 5552 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "61077(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 13 - 0 "61077(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401384BP male - GYNG28087 5 32109542 32170613 61072 Gain 3 0.896969 60 1035 chas 71.31 Gain 71.19 Gain 0 - GainGain- 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" CSHY74530 5 32109542 32170613 61072 Gain 3 0.897585 60 1035 chas 71.31 Gain 99.95 Gain 0 - GainGain- 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" TQFG68171 5 32109542 32170613 61072 Gain 3 0.912803 60 1035 chas 80.12 Gain 86.33 Gain 0 - GainGain- 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" WSYP96126 5 32109542 32170613 61072 Gain 4 0.943198 60 1035 chas 80.12 Gain 90.07 Gain 90.07 Gain GainGainGain 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400660GK male "research_filter, clinical_filter" UUAC53094 5 32109542 32170613 61072 Gain 4 0.939822 60 1035 chas 80.12 Gain 90.07 Gain 90.07 Gain GainGainGain 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400849SH male "research_filter, clinical_filter" CWFZ39975 5 32109542 32170613 61072 Gain 4 0.934709 60 1035 chas 80.1 Gain 90.07 Gain 90.07 Gain GainGainGain 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" THXY16685 5 32109542 32170613 61072 Gain 3 0.894508 60 1035 chas 50.69 Gain 90.07 Gain 0 - GainGain- 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" ISXJ62958 5 32109542 32170613 61072 Gain 4 0.939506 60 1035 chas 80.12 Gain 90.07 Gain 90.07 Gain GainGainGain 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" BDYF88242 5 32109542 32170613 61072 Gain 3 0.891386 60 1035 chas 35.45 Gain 100 Gain 0 - GainGain- 40 80.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" VWJW18084 5 32109542 32170613 61072 Gain 4 0.949234 60 1035 chas 80.12 Gain 100 Gain 90.07 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400441GS male "research_filter, clinical_filter" PXVB29564 5 32109542 32170613 61072 Gain 3 0.90561 60 1035 chas 71.31 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400818BL female "research_filter, clinical_filter" IWPA56866 5 32109542 32170613 61072 Gain 3 0.901544 60 1035 chas 71.31 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401700BN_1 female "research_filter, clinical_filter" DSDE67128 5 32109542 32170613 61072 Gain 3 0.889466 60 1035 chas 46.35 Gain 41.78 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401125LM female "research_filter, clinical_filter" WNMH95182 5 32109542 32170613 61072 Gain 3 0.892529 60 1035 chas 80.12 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" RIAA15120 5 32109542 32170613 61072 Gain 3 0.890621 60 1035 chas 80.1 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401315HK female "research_filter, clinical_filter" OAGJ33866 5 32109542 32170613 61072 Gain 3 0.897375 60 1035 chas 80.12 Gain 73.19 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" MMSK97554 5 32109542 32170613 61072 Gain 3 0.893539 60 1035 chas 80.12 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401091HS male "research_filter, clinical_filter" BRIY29802 5 32109542 32170613 61072 Gain 3 0.893168 60 1035 chas 80.1 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" ZMNN35179 5 32109542 32170613 61072 Gain 4 0.944131 60 1035 chas 80.12 Gain 100 Gain 90.07 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400430KV male "research_filter, clinical_filter" FSLR52955 5 32109542 32170613 61072 Gain 3 0.901692 60 1035 chas 80.12 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" LLRB50237 5 32109542 32170613 61072 Gain 4 0.955773 60 1035 chas 80.1 Gain 90.07 Gain 90.07 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" IORF34772 5 32109542 32170613 61072 Gain 3 0.898593 60 1035 chas 80.1 Gain 90.07 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" APOV19283 5 32109542 32170613 61072 Gain 4 0.942921 60 1035 chas 80.12 Gain 90.07 Gain 90.07 Gain GainGainGain 40 NA NA NA "ChAS,IPN,NXS,PTK" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61072(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61072(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" SBQG40276 5 32109576 32170613 61038 Gain 3 0.899065 59 1052 chas 80.11 Gain 72.67 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 5p13.3 - "GOLPH3,PDZD2" 2 "GOLPH3,PDZD2" 2 - - - "61038(14|Wang(2007),Redon(2006),de Smith(2007),Itsara(2009),Pinto(2007),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Mills(2006)) - 40 - 0 "61038(40|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Campbell(2011),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400145BL female "research_filter, clinical_filter" THXY16685 14 106667115 106728149 61035 Loss 1 0.887818 26 2441 chas 0 - 17.94 Loss 0 - -Loss- 28 100 Loss "BS,GTC" "ChAS,NXS" 14q32.33 - - 0 - 0 - - - "61035(44|Sebat(2004),Korbel(2007),Matsuzaki(2009),Conrad(2009),Wang(2007),de Smith(2007),Levy(2007),Bentley(2008),Pang(2010),Kidd(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" 550(1|Park(2010)) 28 28 - 0 "61035(269|Conrad(2009),Korbel(2007),Locke(2006),Wang(2007),Itsara(2009),Levy(2007),Sharp(2005),Kidd(2008),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Wilson(2010),Wong(2007),Cooper(2008),Sebat(2004),Pinto(2011),Bentley(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" PDHC59420 15 53524844 53585873 61030 Gain 3 0.899632 45 1387 chas 100 Gain 100 Gain 0 - GainGain- 53 NA NA NA "ChAS,IPN,NXS" 15q21.3 - - 0 - 0 - - - - - - 53 - 0 "58345(3|Itsara(2009),Teague(2010),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401457WK male research_filter AQKH94698 14 32244295 32305321 61027 Loss 1 0.886729 48 1298 chas 89.77 Loss 79.53 Loss 94.73 Loss LossLossLoss 35 91.27 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q12 - NUBPL 1 NUBPL 1 NUBPL - - 5240(1|Mills(2006)) 156(1|Ahn(2009)) - 35 - 0 "28771(10|Ahn(2009),Durbin(2010),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" OWVL37831 15 23615769 23676783 61015 Loss 1 0.895902 43 1452 chas 83.16 Loss 82.33 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "61015#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "61015(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "61015(40|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400770MA female "research_filter, clinical_filter" TRVK84587 11 55374176 55435179 61004 Loss 1 0.861722 64 968 chas 100 Loss 0 - 0 - Loss-- 44 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "59960(2|Kidd(2008),Korbel(2007))" "61004(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "61004(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401288LD male "research_filter, clinical_filter" DMKI43381 11 55374176 55435179 61004 Loss 1 0.872978 64 968 chas 100 Loss 0 - 0 - Loss-- 44 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "59960(2|Kidd(2008),Korbel(2007))" "61004(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "61004(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400763BT female "research_filter, clinical_filter" XBAT84080 6 254254 315197 60944 Loss 1 0.87975 98 628 chas 0 - 0 - 0 - --- 36 94.92 Loss "BS,IP6" ChAS 6p25.3 - DUSP22 1 DUSP22 1 - - - "60944(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 36 - 0 "60944(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no affy6_yes 400186WC female clinical_filter HXSU46589 16 1066423 1127329 60907 Loss 1 0.893429 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 401299ST female - WYBU35088 16 1066423 1127329 60907 Loss 1 0.890695 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400579HJ female - YMNK31782 16 1066423 1127329 60907 Loss 1 0.890484 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400438DB female - WUMM65746 16 1066423 1127329 60907 Loss 1 0.906916 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400077EB female - SDOC11846 16 1066423 1127329 60907 Loss 1 0.892857 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400325BE male - BTBU94149 16 1066423 1127329 60907 Loss 1 0.901437 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 401177SL female - IRJE88693 16 1066423 1127329 60907 Loss 1 0.88299 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400739SS_1 female - PEZC72297 16 1066423 1127329 60907 Loss 1 0.904551 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400298ME male - RVAL88696 16 1066423 1127329 60907 Loss 1 0.892679 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400353ML male - NSZE63198 16 1066423 1127329 60907 Loss 1 0.888096 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400724CD male - FPEA56091 16 1066423 1127329 60907 Loss 1 0.886787 8 8701 chas 0 - 0 - 0 - --- 11 0 - - ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 400075MR male - XZOF13341 16 1066423 1127329 60907 Loss 1 0.899945 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400629BM female - RJMG42549 16 1066423 1127329 60907 Loss 1 0.905871 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400749VW male - KNEY83753 16 1066423 1127329 60907 Loss 1 0.891934 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400411TG male - QJEX76408 16 1066423 1127329 60907 Loss 1 0.892267 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400413FJ female - WWCZ24238 16 1066423 1127329 60907 Loss 1 0.889551 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401736BF male - EIKI77114 16 1066423 1127329 60907 Loss 1 0.887223 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401221LD female - GVYY53861 16 1066423 1127329 60907 Loss 1 0.905454 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401214BJ male - OAGJ33866 16 1066423 1127329 60907 Loss 1 0.890871 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401265CB male - TCTA60809 16 1066423 1127329 60907 Loss 1 0.885914 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401965TG female - KWYE93203 16 1066423 1127329 60907 Loss 1 0.885252 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401357MH male - XZZR64566 16 1066423 1127329 60907 Loss 1 0.891225 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400996MC male - VQFC85923 16 1066423 1127329 60907 Loss 1 0.904421 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401239PR male - QVOH35939 16 1066423 1127329 60907 Loss 1 0.897862 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400291VJ male - XZCA75295 16 1066423 1127329 60907 Loss 1 0.902524 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400033KC female - DQHB62647 16 1066423 1127329 60907 Loss 1 0.909291 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401732HW male - VVRJ19010 16 1066423 1127329 60907 Loss 1 0.904525 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401535RJ male - FIIC23299 16 1066423 1127329 60907 Loss 1 0.888356 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400843FL female - IJLN67055 16 1066423 1127329 60907 Loss 1 0.895139 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 400982BS female - ICCB48361 16 1066423 1127329 60907 Loss 1 0.899639 8 8701 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 16p13.3 - "LOC146336,SSTR5" 2 "LOC146336,SSTR5" 2 SSTR5 - - "60907(14|Pang(2010),Kidd(2008),Jakobsson(2008),Simon-Sanchez(2007))" "1998(5|Conrad(2009),Levy(2007),Perry(2008))" - 11 - 0 "60907(44|Conrad(2009),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007),Mills(2006))" FALSE TRUE ipn_no algo_no NA 401258PC female - UHFE12130 X 140159974 140220878 60905 Loss 1 0.881541 8 8700 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS Xq27.1 - - 0 - 0 - - 60905(1|Kidd(2008)) 45940(1|Matsuzaki(2009)) - 80 11 - 0 "60905(6|Kidd(2008),Redon(2006),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401198TI female - YKER13969 19 55448825 55509675 60851 Loss 1 0.865641 36 1738 chas 0 - 0 - 0 - --- 24 NA NA NA ChAS 19q13.42 - "NLRP7,NLRP2" 2 "NLRP7,NLRP2" 2 NLRP7 - - "5682(4|Conrad(2009),Perry(2008),Ju(2010))" - 4 24 - 0 "60851(30|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),Wilson(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401372RR male clinical_filter DWHR77544 11 134560163 134621010 60848 Loss 1 0.91816 84 733 chas 99.41 Loss 99.68 Loss 99.68 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 11q25 - - 0 - 0 - - - "60848(43|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Ju(2010),Simon-Sanchez(2007),Park(2010),Itsara(2009),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "1716(11|Pang(2010),Conrad(2009),Levy(2007),Matsuzaki(2009),Bentley(2008))" - 67 - 0 "60848(99|Ju(2010),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Shaikh(2009),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Simon-Sanchez(2007),Mills(2006),Conrad(2009),Jakobsson(2008),McKernan(2009),Campbell(2011),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401468RL male "research_filter, clinical_filter" TPCN38834 7 38295932 38356732 60801 Gain 3 0.884289 78 789 chas 0 - 47.58 Gain 0 - -Gain- 89 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "60801(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 37 89 - 0 "60801(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400879DS female "research_filter, clinical_filter" RVIS81666 15 23615769 23676512 60744 Loss 1 0.916234 42 1481 chas 90.75 Loss 84.44 Loss 91.71 Loss LossLossLoss 13 57.64 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "60744#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "60744(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "60744(40|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" QRNV11451 15 23615769 23676512 60744 Loss 1 0.891651 42 1481 chas 90.75 Loss 86.33 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "60744#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "60744(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "60744(40|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401918CA male "research_filter, clinical_filter" QUGL52736 15 23615769 23676512 60744 Loss 1 0.909446 42 1481 chas 90.75 Loss 86.33 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "60744#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "60744(19|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "60744(40|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401780BB male "research_filter, clinical_filter" LELT20618 3 82711996 82772709 60714 Loss 1 0.924103 36 1734 chas 99.98 Loss 96.74 Loss 96.73 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 3p12.2 - - 0 - 0 - - - - - - 35 - 0 "60714(3|Itsara(2009),Kidd(2008),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400211BJ female "research_filter, clinical_filter" CAEK98371 11 31270104 31330799 60696 Loss 1 0.91771 40 1556 chas 92.79 Loss 96.39 Loss 96.4 Loss LossLossLoss 25 92.78 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p13 - DCDC1 1 DCDC1 1 - - - 60696(1|Pinto(2007)) - 3 25 - 0 "60696(5|Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" XFEU37018 6 254254 314934 60681 Gain 3 0.883336 96 638 chas 1.38 Gain 73.02 Gain 0 - GainGain- 34 61.77 Gain IP6 "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "60681(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 34 - 0 "60681(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" RDBP35321 6 254283 314934 60652 Gain 3 0.888198 95 645 chas 0 - 48.3 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "60652(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 33 - 0 "60652(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 400773GS male "research_filter, clinical_filter" NFGH10073 6 29836624 29897260 60637 Gain 3 0.886935 41 1515 chas 0 - 20.71 Gain 0 - -Gain- 40 NA NA NA "ChAS,NXS" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "60637(49|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 35 40 - 0 "60637(319|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 400553PP male research_filter ERUW26412 2 155375036 155435650 60615 Loss 1 0.919244 36 1731 chas 100 Loss 95.77 Loss 95.76 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 2q24.1 - - 0 - 0 - - - 1420(1|Shaikh(2009)) - - 33 - 0 "60615(2|Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" HBQS50118 17 36350006 36410559 60554 Loss 1 0.868132 24 2632 chas 0 - 0 - 0 - --- 3 0 - - ChAS 17q12 - LOC440434 1 LOC440434 1 - - - "60554(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 3 - 0 "60554(60|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400205SP_1 male - ZRZC68152 19 45850377 45910921 60545 Gain 3 0.889022 68 903 chas 4.81 Gain 74.7 Gain 0 - GainGain- 27 76.88 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.32 - "CD3EAP,ERCC1,ERCC2,KLC3,PPP1R13L" 5 "CD3EAP,ERCC1,ERCC2,KLC3,PPP1R13L" 5 "ERCC1,ERCC2" - - "41548(3|Wang(2007),McCarroll(2008),Shaikh(2009))" "631(2|Wheeler(2008),Ahn(2009))" - 27 - 0 "60545(24|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400155CW male "research_filter, clinical_filter" HAGL80690 19 45850377 45910921 60545 Gain 3 0.900115 68 903 chas 64.05 Gain 93.74 Gain 0 - GainGain- 27 52.03 - BS "ChAS,IPN,NXS" 19q13.32 - "CD3EAP,ERCC1,ERCC2,KLC3,PPP1R13L" 5 "CD3EAP,ERCC1,ERCC2,KLC3,PPP1R13L" 5 "ERCC1,ERCC2" - - "41548(3|Wang(2007),McCarroll(2008),Shaikh(2009))" "631(2|Wheeler(2008),Ahn(2009))" - 27 - 0 "60545(24|Wang(2007),Ahn(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 400542EG female "research_filter, clinical_filter" SAHS24305 6 29841021 29901563 60543 Loss 1 0.875547 28 2242 chas 34.77 Loss 64 Loss 81.94 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "60543(53|Ju(2010),Korbel(2007),Redon(2006),de Smith(2007),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 319(1|Bentley(2008)) 35 31 - 0 "60543(341|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401968HL female "research_filter, clinical_filter" WXKO33327 15 40204620 40265061 60442 Loss 1 0.913451 27 2324 chas 99.43 Loss 95.29 Loss 100 Loss LossLossLoss 29 NA NA NA "ChAS,IPN,NXS,PTK" 15q15.1 - "EIF2AK4,GPR176" 2 "EIF2AK4,GPR176" 2 - - - - - - 29 - 0 "44481(9|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400496BL female "research_filter, clinical_filter" IJCV29609 11 54701632 54762018 60387 Gain 4 0.924134 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401263HS female research_filter LHMB79045 11 54701632 54762018 60387 Gain 4 0.924266 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401285HN male research_filter MVJH83535 11 54701632 54762018 60387 Gain 4 0.91804 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401771OS male research_filter PDHC59420 11 54701632 54762018 60387 Gain 4 0.905554 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401457WK male research_filter TUPR75049 11 54701632 54762018 60387 Gain 4 0.916855 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401314MK female research_filter WXKO33327 11 54701632 54762018 60387 Gain 4 0.908516 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400496BL female research_filter ROFY65487 11 54701632 54762018 60387 Gain 4 0.921084 10 6709 chas 93.23 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400683EC female research_filter QMEK60192 11 54701632 54762018 60387 Gain 4 0.917066 10 6709 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401711WS male - ENVJ37912 11 54701632 54762018 60387 Gain 4 0.893706 10 6709 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 11q11 - - 0 - 0 - - - "60387(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 5 - 0 "60387(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400532MH male - TZAD89276 1 108925790 108986168 60379 Loss 1 0.923562 12 5489 chas 0 - 100 Loss 0 - -Loss- 9 95.58 Loss BS "ChAS,NXS" 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "60379(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 9 - 0 "60379(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 401185LE female research_filter IRJE88693 1 108925790 108986168 60379 Loss 1 0.927679 12 5489 chas 0 - 100 Loss 0 - -Loss- 9 0 - - "ChAS,NXS" 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "60379(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 9 - 0 "60379(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_no 400739SS_1 female research_filter AYLS39762 1 108925790 108986168 60379 Loss 1 0.922402 12 5489 chas 0 - 100 Loss 0 - -Loss- 9 95.58 Loss BS "ChAS,NXS" 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "60379(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 9 - 0 "60379(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400663MD female research_filter BWEV96807 1 108925790 108986168 60379 Loss 1 0.908171 12 5489 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "60379(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 9 - 0 "60379(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 402012RR male - NWRU68440 1 108925790 108986168 60379 Loss 1 0.914633 12 5489 chas 0 - 0 - 0 - --- 9 NA NA NA ChAS 1p13.3 - - 0 - 0 - - 930(1|Kidd(2008)) "60379(18|Ju(2010),Perry(2008),Matsuzaki(2009),Conrad(2009),Kidd(2008),McCarroll(2008),Park(2010))" - 100 9 - 0 "60379(39|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Teague(2010),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Perry(2008b),Pinto(2011),Park(2010))" FALSE TRUE ipn_no algo_no NA 401064FR male - VVRJ19010 16 87284961 87345335 60375 Loss 1 0.916134 52 1183 chas 89.68 Loss 94.84 Loss 94.83 Loss LossLossLoss 66 NA NA NA "ChAS,IPN,NXS,PTK" 16q24.2 - C16orf95 1 C16orf95 1 - - - - 757(1|Park(2010)) - 66 - 0 "36138(4|Park(2010),Teague(2010),Pinto(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" USNP20353 3 173239853 173300180 60328 Gain 3 0.918626 52 1182 chas 82.51 Gain 82.4 Gain 0 - GainGain- 24 81.32 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400082SD female "research_filter, clinical_filter" PYXL51166 3 173239853 173300180 60328 Gain 3 0.914915 52 1182 chas 82.51 Gain 80.94 Gain 0 - GainGain- 24 82.6 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401146US female "research_filter, clinical_filter" KLEB18411 3 173239853 173300180 60328 Gain 3 0.895966 52 1182 chas 82.51 Gain 99.91 Gain 0 - GainGain- 24 81.3 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" TQFG68171 3 173239853 173300180 60328 Gain 3 0.898139 52 1182 chas 81.58 Gain 91.34 Gain 0 - GainGain- 24 81.3 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" GQSZ37539 3 173239853 173300180 60328 Gain 3 0.905132 52 1182 chas 82.51 Gain 91.34 Gain 0 - GainGain- 24 81.3 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400455SJ female "research_filter, clinical_filter" QXAY99372 3 173239853 173300180 60328 Gain 3 0.896434 52 1182 chas 81.58 Gain 99.91 Gain 0 - GainGain- 24 81.3 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400040CN male "research_filter, clinical_filter" NTSS59900 3 173239853 173300180 60328 Gain 3 0.910701 52 1182 chas 81.58 Gain 91.34 Gain 0 - GainGain- 24 81.3 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400427SD male "research_filter, clinical_filter" CMHA46888 3 173239853 173300180 60328 Gain 3 0.908737 52 1182 chas 81.58 Gain 100 Gain 0 - GainGain- 24 81.3 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" QYVK49015 3 173239853 173300180 60328 Gain 3 0.894417 52 1182 chas 81.58 Gain 91.34 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" ZZDG28391 3 173239853 173300180 60328 Gain 3 0.886903 52 1182 chas 65.28 Gain 99.22 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400801HS female "research_filter, clinical_filter" OOYJ75103 3 173239853 173300180 60328 Gain 3 0.894923 52 1182 chas 82.38 Gain 81.81 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401672FD female "research_filter, clinical_filter" KWBM98824 3 173239853 173300180 60328 Gain 3 0.903728 52 1182 chas 82.38 Gain 99.86 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" MVJH83535 3 173239853 173300180 60328 Gain 3 0.892016 52 1182 chas 82.51 Gain 82.73 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401771OS male "research_filter, clinical_filter" CORE80412 3 173239853 173300180 60328 Gain 3 0.899164 52 1182 chas 82.38 Gain 91.34 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60328(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60328(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400581VJ female "research_filter, clinical_filter" UVWE33125 7 72225160 72285457 60298 Loss 1 0.920009 8 8614 chas 0 - 0 - 0 - --- 19 0 - - ChAS 7q11.23 - TYW1B 1 TYW1B 1 - - - "60298(20|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Mills(2006))" - 84 19 - 0 "60298(107|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Kidd(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Locke(2006),Conrad(2009),McCarroll(2008),Jakobsson(2008),Kidd(2010b),Perry(2008b),Park(2010),Pinto(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_no algo_no affy6_no 401423BA male - QMCQ87044 7 99078692 99138985 60294 Gain 3 0.898139 66 927 chas 84.65 Gain 99.5 Gain 0 - GainGain- 22 97.02 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 7q22.1 - "ZKSCAN5,ZNF789,ZNF394" 3 "ZKSCAN5,ZNF789,ZNF394" 3 - - - - "1422(2|Park(2010),Kim(2009))" - 22 - 0 "50315(5|Park(2010),Wong(2007),Kim(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400152MR male "research_filter, clinical_filter" HDQN23240 5 137393850 137454118 60269 Gain 3 0.907985 46 1339 chas 89.77 Gain 100 Gain 0 - GainGain- 24 100 - BS "ChAS,IPN,NXS" 5q31.2 - "WNT8A,NME5" 2 "WNT8A,NME5" 2 - - - - - - 24 - 0 "48428(2|Wong(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400136DM female research_filter FGIX67905 20 29436789 29497009 60221 Loss 1 0.881178 20 3169 chas 0 - 0 - 0 - --- 21 NA NA NA ChAS 20q11.21 - - 0 - 0 - - - "60221(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 21 - 0 "60221(14|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no NA 401391PJ male - MRAO63769 3 173239853 173300050 60198 Gain 3 0.902212 51 1203 chas 82.69 Gain 91.54 Gain 0 - GainGain- 24 81.47 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60198(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60198(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400093BL female "research_filter, clinical_filter" NCJU46793 3 173239853 173300050 60198 Gain 3 0.895828 51 1203 chas 82.56 Gain 91.54 Gain 0 - GainGain- 24 81.47 Gain BS "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60198(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "60198(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" VGND49817 6 29837072 29897260 60189 Gain 3 0.8693 39 1583 chas 0 - 20.78 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "60189(49|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 35 37 - 0 "60189(319|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401735LE male research_filter YSDD20509 3 173229704 173289835 60132 Gain 3 0.89128 54 1134 chas 82.65 Gain 89.7 Gain 0 - GainGain- 26 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "60132(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 26 NLGN1#asd_candidate 1 "60132(49|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400333CC female "research_filter, clinical_filter" KIAD94479 11 25858844 25918936 60093 Gain 3 0.908888 76 801 chas 99.98 Gain 95.68 Gain 100 Gain GainGainGain 55 99.89 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p14.3 - - 0 - 0 - - - - - - 55 - 0 "60093(9|Itsara(2009),Kidd(2008),Wong(2007),Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400359OR female "research_filter, clinical_filter" ISVP82924 6 29837174 29897260 60087 Gain 3 0.878871 37 1669 chas 0 - 20.44 Gain 0 - -Gain- 35 NA NA NA "ChAS,NXS" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "60087(49|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 35 35 - 0 "60087(319|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_yes NA 401400NP male research_filter GVAB34760 6 78975106 79035172 60067 Loss 1 0.885516 20 3161 chas 100 Loss 0 - 0 - Loss-- 98 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "60067(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 97 - 0 "60067(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400453LN male research_filter XOFJ42304 11 50297005 50357043 60039 Gain 3 0.89052 14 4618 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 11p11.12 - - 0 - 0 - - 60039(1|Kidd(2008)) "60039(10|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" - 46 13 - 0 "60039(33|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400177CG male - CAYM40684 8 130792203 130852228 60026 Gain 3 0.894771 32 1936 chas 79.32 Gain 88.4 Gain 0 - GainGain- 22 NA NA NA "ChAS,IPN,NXS" 8q24.21 - GSDMC 1 GSDMC 1 - - - - - - 22 - 0 40108(2|Shaikh(2009)) FALSE TRUE ipn_yes algo_yes NA 401986LC female research_filter JFSR33951 3 173229704 173289640 59937 Gain 3 0.894961 52 1175 chas 100 Gain 100 Gain 0 - GainGain- 25 81.78 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "59937(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 25 NLGN1#asd_candidate 1 "59937(49|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400444MM female "research_filter, clinical_filter" DBZL89045 10 18106430 18166364 59935 Gain 4 0.918678 13 4994 chas 0 - 28.81 Gain 0 - -Gain- 6 0 - - "ChAS,NXS" 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "59935(9|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_yes affy6_no 400032RC female research_filter DUEF32956 11 89487936 89547851 59916 Loss 1 0.907662 23 2723 chas 0 - 0 - 0 - --- 10 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "59916(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 10 - 0 "59916(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 401190WC male - DOJD65755 2 52257509 52317396 59888 Loss 1 0.909286 46 1330 chas 100 Loss 95.22 Loss 100 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - 1564(1|McKernan(2009)) 859(1|Park(2010)) - 46 - 0 "58938(7|Park(2010),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402023EC female "research_filter, clinical_filter" PDHC59420 Y 18822690 18882571 59882 Loss 0 0.864677 21 2994 chas 100 Loss 0 - 0 - Loss-- 25 NA NA NA "ChAS,IPN" Yq11.221 - - 0 - 0 - - - - - - 25 - 0 59882(1|Durbin(2010)) FALSE TRUE ipn_yes algo_yes NA 401457WK male research_filter SMGW17663 2 183141665 183201505 59841 Loss 1 0.92173 45 1360 chas 88.25 Loss 93.76 Loss 93.76 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 2q32.1 - PDE1A 1 - 0 - - - "30990(2|Itsara(2009),McKernan(2009))" - - 26 - 0 "30990(4|Itsara(2009),McKernan(2009),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" BDYF88242 1 1627906 1687674 59769 Loss 1 0.896826 39 1572 chas 74.78 Loss 70.5 Loss 0 - LossLoss- 23 74.76 Loss "BS,IP6" "ChAS,IPN,NXS" 1p36.33 - "NADK,SLC35E2,MMP23A,CDK11B,CDK11A" 5 "CDK11B,NADK,SLC35E2,CDK11A,MMP23A" 5 - "59769#1%""1p36 microdeletion syndrome"":5408761" - "59769(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 80 23 - 0 "59769(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" GHAL32977 8 86452051 86511775 59725 Loss 1 0.923928 40 1531 chas 99.98 Loss 99.18 Loss 100 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 8q21.2 - - 0 - 0 - - - 5930(1|de Smith(2007)) - 8 37 - 0 "59725(10|Pinto(2011),Wong(2007),De(Smith_2007),Shaikh(2009),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" WGSV83254 13 20836930 20896652 59723 Loss 1 0.917452 64 947 chas 94.5 Loss 97.24 Loss 100 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 13q12.11 - - 0 - 0 - - - 59723(1|Pinto(2007)) - - 46 - 0 2025(2|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401733CG male "research_filter, clinical_filter" BTJZ41884 7 38295932 38355647 59716 Loss 1 0.868226 76 796 chas 0 - 0 - 0 - --- 86 NA NA NA ChAS 7p14.1 - TARP 1 TARP 1 - - - "59716(19|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 37 86 - 0 "59716(52|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 400068PW female clinical_filter BDYF88242 11 55393295 55452996 59702 Gain 3 0.880648 80 755 chas 0 - 100 Gain 0 - -Gain- 40 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58658(2|Kidd(2008),Korbel(2007))" "59702(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 40 - 0 "59702(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401958MF male "research_filter, clinical_filter" EZDG77492 11 55393295 55452996 59702 Gain 3 0.871812 80 755 chas 0 - 83.7 Gain 0 - -Gain- 40 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58658(2|Kidd(2008),Korbel(2007))" "59702(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 40 - 0 "59702(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400308SP male "research_filter, clinical_filter" BXCR78538 11 55393295 55452996 59702 Gain 3 0.875485 80 755 chas 0 - 100 Gain 0 - -Gain- 40 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58658(2|Kidd(2008),Korbel(2007))" "59702(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 40 - 0 "59702(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401050GS female "research_filter, clinical_filter" PWPH55056 11 55393295 55452996 59702 Gain 3 0.884896 80 755 chas 0 - 83.7 Gain 0 - -Gain- 40 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58658(2|Kidd(2008),Korbel(2007))" "59702(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 40 - 0 "59702(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401804FG male "research_filter, clinical_filter" ENVJ37912 11 55393295 55452996 59702 Gain 3 0.877289 80 755 chas 0 - 55.55 Gain 0 - -Gain- 40 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58658(2|Kidd(2008),Korbel(2007))" "59702(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 40 - 0 "59702(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400532MH male "research_filter, clinical_filter" KSNB36135 17 44228894 44288442 59549 Loss 1 0.869024 44 1384 chas 0 - 0 - 0 - --- 53 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 59549(1|Kidd(2008)) "59549(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) 12 53 - 0 "59549(216|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 401677MM female clinical_filter FRXS36515 17 44228894 44288442 59549 Loss 1 0.852865 44 1384 chas 0 - 0 - 0 - --- 53 NA NA NA ChAS 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 59549(1|Kidd(2008)) "59549(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) 12 53 - 0 "59549(216|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_no NA 400769SL female clinical_filter VWJW18084 13 64329018 64388542 59525 Gain 3 0.886968 45 1352 chas 96.29 Gain 76.39 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 13q21.31 - - 0 - 0 - - 1996(1|Kidd(2008)) "59525(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 81 42 - 0 "59525(9|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400441GS male research_filter VZJA70154 4 161947896 162007295 59400 Gain 3 0.906063 37 1650 chas 85.85 Gain 88.89 Gain 0 - GainGain- 45 93.22 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "59400(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "59400(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 401427CB male research_filter YBGD61325 11 55393615 55452996 59382 Loss 1 0.856058 79 761 chas 100 Loss 0 - 0 - Loss-- 39 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58338(2|Kidd(2008),Korbel(2007))" "59382(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 39 - 0 "59382(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400543CK male "research_filter, clinical_filter" GUYS21436 11 55393615 55452996 59382 Loss 1 0.869669 79 761 chas 100 Loss 0 - 0 - Loss-- 39 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58338(2|Kidd(2008),Korbel(2007))" "59382(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 39 - 0 "59382(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400582WS female "research_filter, clinical_filter" YKLI59783 11 55393615 55452996 59382 Gain 3 0.874131 79 761 chas 0 - 83.61 Gain 0 - -Gain- 39 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58338(2|Kidd(2008),Korbel(2007))" "59382(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 39 - 0 "59382(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401919MD male "research_filter, clinical_filter" KWJN47187 6 257049 316401 59353 Gain 3 0.877793 98 611 chas 0 - 13.02 Gain 0 - -Gain- 35 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "59353(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 35 - 0 "59353(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_no 400821FE female "research_filter, clinical_filter" YZQJ34471 6 257065 316401 59337 Gain 3 0.877926 97 618 chas 0 - 51.77 Gain 0 - -Gain- 35 63.17 Gain IP6 "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "59337(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 35 - 0 "59337(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_yes 400482MD male "research_filter, clinical_filter" TQFG68171 11 55393677 55452996 59320 Gain 3 0.876826 78 770 chas 0 - 65.82 Gain 0 - -Gain- 39 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58276(2|Kidd(2008),Korbel(2007))" "59320(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 39 - 0 "59320(736|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400265LK male "research_filter, clinical_filter" DZXP20142 11 28119090 28178390 59301 Loss 1 0.910262 72 835 chas 87.49 Loss 93.74 Loss 93.77 Loss LossLossLoss 32 NA NA NA "ChAS,IPN,NXS,PTK" 11p14.1 - "KIF18A,METTL15" 2 "KIF18A,METTL15" 2 - - - 5098(1|Mills(2006)) - - 32 - 0 "53669(3|Wong(2007),Durbin(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" TQQL83388 8 48163397 48222687 59291 Gain 3 0.910568 33 1852 chas 92.72 Gain 100 Gain 0 - GainGain- 21 90.14 Gain "BS,IP6" "ChAS,IPN,NXS" 8q11.21 - KIAA0146 1 KIAA0146 1 - - "44653(5|Pang(2010),Kidd(2008),Korbel(2007))" - - 60 21 - 0 "45212(18|Teague(2010),Korbel(2007),Kidd(2010b),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Wilson(2010),Pinto(2011))" FALSE TRUE ipn_yes algo_yes affy6_yes 401365DJ male research_filter KVGJ18529 Y 24577839 24637115 59277 Loss 0 0.868639 18 3486 chas 100 Loss 0 - 0 - Loss-- 18 NA NA NA "ChAS,IPN" Yq11.223 - "PRY,PRY2,TTTY6,TTTY6B" 4 "PRY,PRY2,TTTY6,TTTY6B" 4 - "59277#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - - - 100 18 - 0 "59277(3|Teague(2010),Redon(2006),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401636WR male research_filter PVOR72227 7 38319296 38378483 59188 Loss 1 0.878026 84 713 chas 0 - 50.23 Loss 100 Loss #NAME? 103 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 7p14.1 - - 0 - 0 - - - "59188(19|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 103 - 0 "59188(40|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Kidd(2008),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" VRGJ17464 11 55376010 55435179 59170 Gain 3 0.875947 62 970 chas 0 - 68.4 Gain 0 - -Gain- 42 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "58126(2|Kidd(2008),Korbel(2007))" "59170(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "59170(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401914PR male "research_filter, clinical_filter" XNCW62958 1 1628813 1687927 59115 Gain 3 0.904966 37 1642 chas 0 - 0 - 0 - --- 22 NA NA NA ChAS 1p36.33 - "NADK,SLC35E2,MMP23A,CDK11B,CDK11A" 5 "CDK11B,NADK,SLC35E2,CDK11A,MMP23A" 5 - "59115#1%""1p36 microdeletion syndrome"":5408761" - "59115(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 79 22 - 0 "59115(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" FALSE TRUE ipn_no algo_no NA 401490TL male - ZDRZ89201 6 257340 316401 59062 Gain 3 0.875116 96 621 chas 0 - 28.93 Gain 0 - -Gain- 35 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "59062(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 35 - 0 "59062(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401855RE male "research_filter, clinical_filter" DZXP20142 15 23620154 23679206 59053 Loss 1 0.889054 44 1373 chas 76.81 Loss 86.91 Loss 86.91 Loss LossLossLoss 14 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "59053#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "59053(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 14 - 0 "59053(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400838AM female "research_filter, clinical_filter" QKWF92816 12 86011019 86069997 58979 Loss 1 0.915687 44 1371 chas 89.56 Loss 89.79 Loss 89.25 Loss LossLossLoss 38 88.81 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.31 - - 0 - 0 - - - "58979(3|McKernan(2009),Pinto(2007))" - - 38 - 0 "58979(5|Pinto(2011),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400295PS female "research_filter, clinical_filter" XREB60973 20 58784498 58843425 58928 Gain 3 0.898093 53 1133 chas 87.76 Gain 97.71 Gain 0 - GainGain- 80 NA NA NA "ChAS,IPN,NXS" 20q13.33 - - 0 - 0 - - - - - - 80 - 0 371(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401084TD male "research_filter, clinical_filter" QRKX79081 10 46996612 47055498 58887 Loss 1 0.861477 58 1033 chas 0 - 0 - 0 - --- 25 0 - - ChAS 10q11.22 - GPRIN2 1 GPRIN2 1 - - "45180(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "58887(31|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 25 - 0 "58887(178|Teague(2010),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Wang(2007),Sebat(2004),Park(2010),Pinto(2011),Jakobsson(2008),Schuster(2010),Ju(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_no 400631SJ male clinical_filter JFDL89779 1 1628813 1687675 58863 Gain 3 0.904708 36 1681 chas 27.74 Gain 0 - 0 - Gain-- 22 NA NA NA "ChAS,IPN" 1p36.33 - "NADK,SLC35E2,MMP23A,CDK11B,CDK11A" 5 "CDK11B,NADK,SLC35E2,CDK11A,MMP23A" 5 - "58863#1%""1p36 microdeletion syndrome"":5408761" - "58863(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 80 21 - 0 "58863(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" FALSE TRUE ipn_yes algo_yes NA 401526WB male research_filter VYEA28313 9 94287302 94346114 58813 Gain 3 0.894819 40 1508 chas 86.43 Gain 93.23 Gain 0 - GainGain- 47 86.19 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 9q22.31 - - 0 - 0 - - - - - - 47 - 0 29157(2|Durbin(2010)) FALSE TRUE ipn_yes algo_yes affy6_yes 400983PV female research_filter TOTG24684 7 33130674 33189478 58805 Gain 3 0.908187 76 784 chas 80.54 Gain 100 Gain 0 - GainGain- 34 0 - - "ChAS,IPN,NXS" 7p14.3 - "RP9,BBS9" 2 "RP9,BBS9" 2 "RP9,BBS9" - - "57750(6|Conrad(2009),Ahn(2009),Itsara(2009),Park(2010),Kim(2009),Shaikh(2009))" 646(1|Park(2010)) - 34 - 0 "58805(43|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Wong(2007),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_no 401764JJ male "research_filter, clinical_filter" VUFI80076 7 33130674 33189478 58805 Gain 3 0.896222 76 784 chas 80.8 Gain 96.61 Gain 0 - GainGain- 34 NA NA NA "ChAS,IPN,NXS" 7p14.3 - "RP9,BBS9" 2 "RP9,BBS9" 2 "RP9,BBS9" - - "57750(6|Conrad(2009),Ahn(2009),Itsara(2009),Park(2010),Kim(2009),Shaikh(2009))" 646(1|Park(2010)) - 34 - 0 "58805(43|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Wong(2007),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402001SR male "research_filter, clinical_filter" NUMT67226 7 33130674 33189478 58805 Gain 3 0.883676 76 784 chas 10.11 Gain 80.68 Gain 0 - GainGain- 34 NA NA NA "ChAS,IPN,NXS" 7p14.3 - "RP9,BBS9" 2 "RP9,BBS9" 2 "RP9,BBS9" - - "57750(6|Conrad(2009),Ahn(2009),Itsara(2009),Park(2010),Kim(2009),Shaikh(2009))" 646(1|Park(2010)) - 34 - 0 "58805(43|Teague(2010),Ahn(2009),Korbel(2007),Conrad(2009),Itsara(2009),Durbin(2010),Pinto(2011),Wong(2007),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401079HJ female "research_filter, clinical_filter" PCSL59179 11 99516916 99575705 58790 Loss 1 0.926982 91 653 chas 82.49 Loss 80.25 Loss 97.73 Loss LossLossLoss 48 NA NA NA "ChAS,IPN,NXS,PTK" 11q22.1 - CNTN5 1 - 0 - - - "42449(2|Itsara(2009),Shaikh(2009))" - - 48 - 0 "46214(9|Itsara(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401879HJ male "research_filter, clinical_filter" IFUE20361 6 29841021 29899737 58717 Loss 1 0.881692 26 2348 chas 53.7 Loss 32.31 Loss 0 - LossLoss- 31 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "58717(50|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 36 31 - 0 "58717(334|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401834CB female "research_filter, clinical_filter" FXID76383 11 55376498 55435179 58682 Loss 1 0.861093 60 994 chas 100 Loss 0 - 0 - Loss-- 38 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "57638(2|Kidd(2008),Korbel(2007))" "58682(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 38 - 0 "58682(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" WLVX71025 11 55376498 55435179 58682 Loss 1 0.86487 60 994 chas 100 Loss 0 - 0 - Loss-- 38 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "57638(2|Kidd(2008),Korbel(2007))" "58682(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 38 - 0 "58682(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400064WJ female "research_filter, clinical_filter" SVIC15912 6 257742 316401 58660 Gain 3 0.879181 94 630 chas 0 - 0 - 0 - --- 34 63.24 Gain IP6 ChAS 6p25.3 - DUSP22 1 DUSP22 1 - - - "58660(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 34 - 0 "58660(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_no affy6_yes 401113MJ female clinical_filter EGYT92211 3 166515011 166573652 58642 Gain 3 0.902744 39 1543 chas 99.98 Gain 100 Gain 0 - GainGain- 25 NA NA NA "ChAS,IPN,NXS" 3q26.1 - - 0 - 0 - - - "20078(8|Wang(2007),McCarroll(2008),Matsuzaki(2009))" 1(1|Levy(2007)) - 25 - 0 "16264(9|Pinto(2011),Wang(2007),McCarroll(2008),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401402EN male research_filter JJLS74641 11 55376498 55435130 58633 Loss 1 0.867455 58 1028 chas 100 Loss 0 - 0 - Loss-- 38 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "57589(2|Kidd(2008),Korbel(2007))" "58633(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 38 - 0 "58633(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400929MM male "research_filter, clinical_filter" LMDJ78561 11 55376498 55435130 58633 Gain 3 0.880776 58 1028 chas 0 - 99.77 Gain 0 - -Gain- 38 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "57589(2|Kidd(2008),Korbel(2007))" "58633(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 38 - 0 "58633(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401518VK female "research_filter, clinical_filter" WHSN55625 7 38319296 38377925 58630 Gain 3 0.88262 82 723 chas 0 - 88.3 Gain 0 - -Gain- 102 19.97 Gain GTC "ChAS,NXS" 7p14.1 - - 0 - 0 - - - "58630(19|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 102 - 0 "58630(40|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Kidd(2008),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 401354KM male "research_filter, clinical_filter" QGND60775 7 38319296 38377925 58630 Loss 1 0.869468 82 723 chas 0 - 0 - 100 Loss #NAME? 102 100 Loss "BS,GTC,IP6" "ChAS,PTK" 7p14.1 - - 0 - 0 - - - "58630(19|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 102 - 0 "58630(40|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Kidd(2008),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 401085LA_1 female "research_filter, clinical_filter" XMVT70735 16 74397974 74456588 58615 Loss 1 0.903497 14 4508 chas 0 - 19.17 Loss 0 - -Loss- 7 0 - - "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "58615(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 7 - 0 "58615(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 401873BK male research_filter JORC32909 16 74397974 74456588 58615 Gain 4 0.953122 14 4508 chas 0 - 100 Gain 0 - -Gain- 7 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "58615(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 7 - 0 "58615(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401086MD male research_filter ZDRZ89201 16 74397974 74456588 58615 Gain 4 0.928247 14 4508 chas 0 - 19.06 Gain 0 - -Gain- 7 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "58615(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 7 - 0 "58615(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401855RE male research_filter JSIF57066 16 74397974 74456588 58615 Gain 4 0.933178 14 4508 chas 0 - 0 - 0 - --- 7 92.23 Gain BS ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "58615(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 7 - 0 "58615(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_yes 400512LR female - PTKC28903 16 74397974 74456588 58615 Loss 1 0.895395 14 4508 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "58615(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 96 7 - 0 "58615(88|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400442FE female - HHAT36498 3 8716168 8774776 58609 Loss 1 0.900364 80 741 chas 89.14 Loss 94.59 Loss 94.59 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 3p25.3 - - 0 - 0 - - - "27857(2|Conrad(2009),McKernan(2009))" "877(3|Wang(2008),Levy(2007),Bentley(2008))" 21 30 - 0 "54080(20|Conrad(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010))" TRUE TRUE ipn_yes algo_yes NA 400574MA female "research_filter, clinical_filter" FSLR52955 6 29091576 29150160 58585 Loss 1 0.919972 44 1362 chas 99.95 Loss 87.2 Loss 100 Loss LossLossLoss 8 NA NA NA "ChAS,IPN,NXS,PTK" 6p22.1 - OR2J2 1 OR2J2 1 - - - "58585(4|Park(2010),Conrad(2009),Shaikh(2009))" 137(1|Wheeler(2008)) 18 8 - 0 "58585(15|Conrad(2009),Wong(2007),Itsara(2009),Durbin(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" IRJE88693 X 54904045 54962628 58584 Gain 3 0.863545 46 1301 chas 0 - 0 - 0 - --- 24 0 - - ChAS Xp11.21 - "PFKFB1,TRO" 2 "PFKFB1,TRO" 2 - - - "58584(2|Pang(2010),Korbel(2007))" - 2 24 - 0 "58584(8|Pang(2010),Teague(2010),Korbel(2007),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400739SS_1 female - WPZH96755 6 110234299 110292864 58566 Loss 1 0.925392 80 741 chas 93.76 Loss 96.49 Loss 96.49 Loss LossLossLoss 60 93.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q21 - - 0 - 0 - - - - - - 60 - 0 "54478(6|Kidd(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400072GR male "research_filter, clinical_filter" FDPK98295 6 65600603 65659148 58546 Loss 1 0.904996 120 491 chas 93.5 Loss 94.58 Loss 96.75 Loss LossLossLoss 46 93.4 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q12 - EYS 1 EYS 1 EYS - - - - - 46 - 0 "58546(4|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" FPEA56091 11 55376649 55435179 58531 Loss 1 0.8596 56 1064 chas 100 Loss 0 - 0 - Loss-- 35 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "57487(2|Kidd(2008),Korbel(2007))" "58531(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 35 - 0 "58531(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400075MR male "research_filter, clinical_filter" GNZH35610 17 56654007 56712517 58511 Loss 1 0.927594 48 1244 chas 99.45 Loss 99.74 Loss 99.74 Loss LossLossLoss 27 NA NA NA "ChAS,IPN,NXS,PTK" 17q22 - TEX14 1 TEX14 1 - - - 1099(1|Shaikh(2009)) 961(1|Shaikh(2009)) - 27 - 0 "58511(5|Itsara(2009),Redon(2006),Shaikh(2009),Durbin(2010),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 402029KJ male "research_filter, clinical_filter" KRCX57170 3 87942287 88000756 58470 Gain 3 0.896981 36 1670 chas 70.11 Gain 70.71 Gain 0 - GainGain- 31 71.26 Gain "BS,IP6" "ChAS,IPN,NXS" 3p11.1 - - 0 - 0 - - - - - - 31 - 0 "58470(4|Itsara(2009),Wong(2007),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 401460LW male research_filter GAAC71530 5 57842924 57901393 58470 Gain 3 0.888358 42 1426 chas 89.72 Gain 94.94 Gain 0 - GainGain- 24 70.05 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 5q11.2 - RAB3C 1 RAB3C 1 - - - - 2(2|Levy(2007)) - 24 - 0 3500(2|Durbin(2010)) FALSE TRUE ipn_yes algo_yes affy6_yes 400506GN female research_filter KLXQ40405 11 89577749 89636184 58436 Loss 1 0.901367 12 5312 chas 0 - 0 - 0 - --- 3 0 - - ChAS 11q14.3 - "TRIM64B,LOC399940,TRIM53P" 3 "TRIM64B,LOC399940,TRIM53P" 3 - - 9579(1|Kidd(2008)) "58436(13|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010),Kim(2009))" - 100 3 - 0 "58436(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400051MR_1 male - NKHQ61532 6 78969092 79027502 58411 Loss 0 0.982233 22 2781 chas 99.98 Loss 100 Loss 69.68 Loss LossLossLoss 106 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400588BE female research_filter MRAO63769 6 78969092 79027502 58411 Loss 1 0.914263 22 2781 chas 100 Loss 99.17 Loss 0 - LossLoss- 106 100 Loss "BS,IP6" "ChAS,IPN,NXS" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400093BL female research_filter IJPA28382 6 78969092 79027502 58411 Loss 0 0.973597 22 2781 chas 99.98 Loss 100 Loss 74.09 Loss LossLossLoss 106 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400103BN female research_filter WKJP80388 6 78969092 79027502 58411 Loss 0 0.977284 22 2781 chas 99.98 Loss 100 Loss 92.23 Loss LossLossLoss 106 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400320RN male research_filter NYDB63609 6 78969092 79027502 58411 Loss 0 0.986539 22 2781 chas 99.98 Loss 100 Loss 69.68 Loss LossLossLoss 106 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400138LA female research_filter CBEA57280 6 78969092 79027502 58411 Loss 1 0.880389 22 2781 chas 99.98 Loss 0 - 0 - Loss-- 106 100 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400231LP female research_filter TJGR62389 6 78969092 79027502 58411 Loss 0 0.987198 22 2781 chas 99.98 Loss 100 Loss 92.23 Loss LossLossLoss 106 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400207HN male research_filter OSBA52088 6 78969092 79027502 58411 Loss 0 0.962846 22 2781 chas 99.98 Loss 100 Loss 69.68 Loss LossLossLoss 106 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401617KM female research_filter GWFO72077 6 78969092 79027502 58411 Loss 1 0.878086 22 2781 chas 99.98 Loss 39.58 Loss 0 - LossLoss- 106 NA NA NA "ChAS,IPN,NXS" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401536BD female research_filter VUND65965 6 78969092 79027502 58411 Loss 1 0.884522 22 2781 chas 99.98 Loss 0 - 0 - Loss-- 106 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401498HH male research_filter ICCB48361 6 78969092 79027502 58411 Loss 0 0.962008 22 2781 chas 99.98 Loss 100 Loss 69.68 Loss LossLossLoss 106 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401258PC female research_filter DOLM19463 6 78969092 79027502 58411 Loss 1 0.880783 22 2781 chas 0 - 0 - 0 - --- 106 100 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 401607LL male - QMSH77829 6 78969092 79027502 58411 Loss 1 0.875818 22 2781 chas 0 - 0 - 0 - --- 106 100 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400038CK male - QXAY99372 6 78969092 79027502 58411 Loss 1 0.875202 22 2781 chas 0 - 0 - 0 - --- 106 100 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400040CN male - EMKM20452 6 78969092 79027502 58411 Gain 3 0.894183 22 2781 chas 0 - 100 Gain 0 - -Gain- 106 0 - - "ChAS,NXS" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes affy6_no 400107MJ male research_filter MKJI51363 6 78969092 79027502 58411 Gain 3 0.891317 22 2781 chas 0 - 90.04 Gain 0 - -Gain- 106 NA NA NA "ChAS,NXS" 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 400047DS female research_filter ICZT95489 6 78969092 79027502 58411 Gain 3 0.890916 22 2781 chas 0 - 0 - 0 - --- 106 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401386WA male - LNDH30137 6 78969092 79027502 58411 Gain 3 0.898821 22 2781 chas 0 - 0 - 0 - --- 106 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "58411(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 106 - 0 "58411(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401808PS male - ZKDO15212 1 158455373 158513771 58399 Loss 1 0.899404 88 671 chas 100 Loss 99.35 Loss 99.34 Loss LossLossLoss 68 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q23.1 - - 0 - 0 - - - 1512(1|McKernan(2009)) "507(3|McCarroll(2005),Conrad(2005),Shaikh(2009))" 5 67 - 0 "33109(25|Jakobsson(2008),McKernan(2009),Conrad(2006),Durbin(2010),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400361HC female "research_filter, clinical_filter" UXJM82913 11 48791087 48849435 58349 Loss 1 0.915848 14 4488 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS "11p11.12,11p11.2" - - 0 - 0 - - - "58349(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 16 - 0 "58349(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_no algo_no NA 401359HF male - CSHY74530 7 20130461 20188761 58301 Loss 1 0.919667 40 1494 chas 77.73 Loss 88.84 Loss 88.84 Loss LossLossLoss 37 84.53 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7p21.1 - MACC1 1 MACC1 1 - - - - - - 37 - 0 58301(1|Wong(2007)) TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" NINK42890 14 35211570 35269831 58262 Gain 3 0.880408 55 1078 chas 12.79 Gain 93.4 Gain 0 - GainGain- 30 NA NA NA "ChAS,IPN,NXS" 14q13.1 - BAZ1A 1 BAZ1A 1 - - - 5215(1|Shaikh(2009)) - - 30 - 0 "58262(6|Kidd(2008),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401611CD male "research_filter, clinical_filter" QUIW42968 7 157596088 157654312 58225 Gain 3 0.908892 46 1293 chas 83.21 Gain 50.7 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 7q36.3 - "PTPRN2,LOC100506585" 2 LOC100506585 1 - - - "58225(7|Conrad(2009),Perry(2008),McKernan(2009),Pang(2010),Pinto(2007),Simon-Sanchez(2007))" 409(3|Levy(2007)) - 33 - 0 "58225(37|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Pang(2010),Shaikh(2009),Perry(2008b),Pinto(2011),Simon-Sanchez(2007))" FALSE TRUE ipn_yes algo_yes NA 400926LJ female research_filter CWFZ39975 5 53330861 53389060 58200 Loss 1 0.917332 60 986 chas 89.11 Loss 97.7 Loss 97.7 Loss LossLossLoss 50 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q11.2 - ARL15 1 - 0 - - - "7616(4|Park(2010),Ahn(2009),McKernan(2009),Mills(2006))" - - 50 - 0 "58200(6|Ahn(2009),Wong(2007),McKernan(2009),Kidd(2008),Park(2010),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" NOIN63241 7 38293950 38352147 58198 Loss 1 0.872334 78 755 chas 0 - 37.19 Loss 64.41 Loss #NAME? 87 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "58198(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 42 87 - 0 "58198(53|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400641WJ female "research_filter, clinical_filter" OUKT23649 7 38293950 38352147 58198 Gain 3 0.894276 78 755 chas 0 - 91.56 Gain 98.97 Gain #NAME? 87 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "58198(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 42 87 - 0 "58198(53|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400450FG male "research_filter, clinical_filter" OZXZ40778 12 21242299 21300475 58177 Loss 1 0.909535 36 1662 chas 100 Loss 99.59 Loss 100 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" "12p12.2,12p12.1" - "SLCO1B1,SLCO1B7" 2 "SLCO1B1,SLCO1B7" 2 - - - 58177(2|Shaikh(2009)) - - 41 - 0 "58177(7|Itsara(2009),Pinto(2011),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" NRTH35283 X 82768609 82826769 58161 Gain 3 0.889675 72 819 chas 95.2 Gain 0 - 0 - Gain-- 27 98.5 Gain "BS,GTC,IP6" "ChAS,IPN" Xq21.1 - - 0 - 0 - - - - - 7 27 - 0 "58161(5|Teague(2010),Iafrate(2004),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401052BM female "research_filter, clinical_filter" GYLD25146 6 78969403 79027502 58100 Loss 1 0.892888 21 2905 chas 100 Loss 0 - 0 - Loss-- 105 100 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400132HN female research_filter GNXG93257 6 78969403 79027502 58100 Loss 1 0.864142 21 2905 chas 100 Loss 0 - 0 - Loss-- 105 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400108BJ female research_filter IAEL45337 6 78969403 79027502 58100 Loss 1 0.887147 21 2905 chas 100 Loss 0 - 0 - Loss-- 105 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400424LN female research_filter LMDJ78561 6 78969403 79027502 58100 Loss 1 0.881344 21 2905 chas 100 Loss 0 - 0 - Loss-- 105 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401518VK female research_filter CVRD94421 6 78969403 79027502 58100 Loss 1 0.881936 21 2905 chas 0 - 0 - 0 - --- 105 100 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400586RD male - MECH38806 6 78969403 79027502 58100 Loss 1 0.882072 21 2905 chas 0 - 0 - 0 - --- 105 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400671PP male - TPDE39419 6 78969403 79027502 58100 Loss 1 0.888033 21 2905 chas 0 - 0 - 0 - --- 105 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401369GR male - TUPR75049 6 78969403 79027502 58100 Gain 3 0.886781 21 2905 chas 0 - 0 - 0 - --- 105 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "58100(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 105 - 0 "58100(819|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401314MK female - FEZX98083 12 32557579 32615662 58084 Loss 1 0.906267 44 1350 chas 84.11 Loss 83.94 Loss 100 Loss LossLossLoss 40 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - 58084(1|Pinto(2007)) - - 40 - 0 "58084(5|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400106PC male "research_filter, clinical_filter" QAGW25123 1 26805683 26863744 58062 Loss 1 0.898644 28 2150 chas 34.87 Loss 30.88 Loss 0 - LossLoss- 23 64.13 Loss "BS,GTC" "ChAS,IPN,NXS" 1p36.11 - RPS6KA1 1 RPS6KA1 1 - - - - - 2 23 - 0 "8451(6|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400234CA female "research_filter, clinical_filter" RMNM29531 11 55402801 55460788 57988 Gain 3 0.87192 79 743 chas 0 - 62.42 Gain 0 - -Gain- 41 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "56944(2|Kidd(2008),Korbel(2007))" "57988(75|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 41 - 0 "57988(730|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401068SD female "research_filter, clinical_filter" CRTB70467 16 4595735 4653699 57965 Loss 1 0.902982 40 1486 chas 72.49 Loss 86.26 Loss 100 Loss LossLossLoss 21 93.14 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.3 - C16orf96 1 C16orf96 1 - - - - 461(1|de Smith(2007)) - 21 - 0 "57965(5|De(Smith_2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400577MK female "research_filter, clinical_filter" KSNB36135 6 76424885 76482840 57956 Gain 3 0.897355 34 1756 chas 81.41 Gain 90.69 Gain 0 - GainGain- 28 NA NA NA "ChAS,IPN,NXS" 6q14.1 - "SENP6,MYO6" 2 "SENP6,MYO6" 2 MYO6 - - 1877(1|Park(2010)) - - 28 - 0 "4177(2|Park(2010),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401677MM female research_filter VBEF49630 11 48791516 48849435 57920 Loss 1 0.925952 12 5265 chas 0 - 89.42 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" "11p11.12,11p11.2" - - 0 - 0 - - - "57920(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 13 - 0 "57920(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_no algo_yes NA 400022WA female research_filter PVOR72227 11 55377289 55435179 57891 Loss 1 0.85857 54 1092 chas 100 Loss 0 - 0 - Loss-- 30 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "56847(2|Kidd(2008),Korbel(2007))" "57891(56|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 30 - 0 "57891(723|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400870KC female "research_filter, clinical_filter" LELT20618 6 257049 314934 57886 Gain 3 0.881926 94 622 chas 18.37 Gain 58.96 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57886(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 32 - 0 "57886(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400211BJ female "research_filter, clinical_filter" NXEA90195 6 257065 314934 57870 Gain 3 0.8904 93 629 chas 1.44 Gain 71.55 Gain 0 - GainGain- 32 34.36 Gain IP6 "ChAS,IPN,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57870(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 32 - 0 "57870(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" OWWC21327 6 257340 315197 57858 Loss 1 0.870863 94 622 chas 0 - 13.46 Loss 0 - -Loss- 34 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57858(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 34 - 0 "57858(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 400547BS female "research_filter, clinical_filter" BGWX92658 10 89195575 89253430 57856 Loss 1 0.871047 36 1653 chas 0 - 0 - 0 - --- 3 0 - - ChAS 10q23.2 - - 0 - 0 - - - "57856(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Levy(2007))" - 100 3 - 0 "57856(30|Conrad(2009),Redon(2006),Perry(2008),Teague(2010),Durbin(2010),Perry(2008b),Pinto(2011),De(Smith_2007))" TRUE TRUE ipn_no algo_no NA 401566DD male clinical_filter JYCC50302 11 48791588 48849435 57848 Loss 1 0.925105 11 5784 chas 80.95 Loss 0 - 0 - Loss-- 12 NA NA NA "ChAS,IPN" "11p11.12,11p11.2" - - 0 - 0 - - - "57848(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 12 - 0 "57848(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_yes algo_yes NA 401778CB male research_filter HAAE15834 11 48791588 48849435 57848 Loss 1 0.934856 11 5784 chas 80.95 Loss 0 - 0 - Loss-- 12 NA NA NA "ChAS,IPN" "11p11.12,11p11.2" - - 0 - 0 - - - "57848(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 12 - 0 "57848(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_yes algo_yes NA 401899MB male research_filter DQHB62647 11 48791588 48849435 57848 Loss 1 0.945491 11 5784 chas 80.95 Loss 76.5 Loss 0 - LossLoss- 12 NA NA NA "ChAS,IPN,NXS" "11p11.12,11p11.2" - - 0 - 0 - - - "57848(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 12 - 0 "57848(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_yes algo_yes NA 401732HW male research_filter TBVD73320 11 48791588 48849435 57848 Loss 1 0.921421 11 5784 chas 0 - 89.48 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" "11p11.12,11p11.2" - - 0 - 0 - - - "57848(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 12 - 0 "57848(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_no algo_yes NA 400712GC female research_filter NNNK99860 11 48791588 48849435 57848 Loss 1 0.941013 11 5784 chas 0 - 85.32 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" "11p11.12,11p11.2" - - 0 - 0 - - - "57848(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 12 - 0 "57848(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_no algo_yes NA 400439IM female research_filter AJUD27157 X 116057635 116115401 57767 Loss 1 0.948308 28 2139 chas 88.61 Loss 0 - 0 - Loss-- 26 NA NA NA "ChAS,IPN" Xq23 - - 0 - 0 - - - - - 3 25 - 0 "57767(7|Jakobsson(2008),Redon(2006),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401075MN female "research_filter, clinical_filter" NGFJ29672 19 24375437 24433199 57763 Loss 1 0.888445 24 2511 chas 70.4 Loss 0 - 0 - Loss-- 19 NA NA NA "ChAS,IPN" "19p11,19p12" - - 0 - 0 - - - "57763(4|Itsara(2009),Pinto(2007),Redon(2006))" - 4 19 - 0 "57763(14|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400269DA female research_filter GHAL32977 19 55307868 55365617 57750 Loss 1 0.911681 34 1750 chas 0 - 98.6 Loss 100 Loss #NAME? 34 NA NA NA "ChAS,NXS,PTK" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "57750(46|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 34 - 0 "57750(98|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_no algo_yes NA 401734PG male "research_filter, clinical_filter" DDLZ80520 7 14090857 14148592 57736 Loss 1 0.924538 48 1228 chas 79.52 Loss 88.27 Loss 88.26 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 7p21.2 - - 0 - 0 - - - "57736(2|Sebat(2004),Wang(2007))" 152(1|Bentley(2008)) - 49 - 0 "57736(10|Sebat(2004),Wang(2007),Shaikh(2009),Durbin(2010),Bentley(2008))" TRUE TRUE ipn_yes algo_yes NA 401892MJ female "research_filter, clinical_filter" INSC49339 7 90109162 90166857 57696 Gain 3 0.901889 46 1282 chas 99.63 Gain 99.99 Gain 0 - GainGain- 46 NA NA NA "ChAS,IPN,NXS" 7q21.13 - - 0 - 0 - - - "57696(2|Conrad(2009),Shaikh(2009))" - 2 46 - 0 "57696(5|Itsara(2009),Conrad(2009),Jakobsson(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401334DH female research_filter PGEB85888 2 52181985 52239633 57649 Gain 3 0.900308 39 1517 chas 67.6 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 2p16.3 - - 0 - 0 - - - - - - 33 - 0 57649(1|Shaikh(2009)) FALSE TRUE ipn_yes algo_yes NA 401582GG female research_filter IDKP47812 11 97817951 97875558 57608 Loss 1 0.945269 72 811 chas 99.68 Loss 99.85 Loss 99.84 Loss LossLossLoss 69 NA NA NA "ChAS,IPN,NXS,PTK" 11q22.1 - - 0 - 0 - - - "57608(2|Pinto(2007),Redon(2006))" - - 69 - 0 "57608(15|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401377MA male "research_filter, clinical_filter" HAAE15834 5 125997381 126054980 57600 Loss 1 0.928913 48 1225 chas 100 Loss 90.25 Loss 95.66 Loss LossLossLoss 27 NA NA NA "ChAS,IPN,NXS,PTK" 5q23.2 - - 0 - 0 - - - - - - 27 - 0 "57600(3|Itsara(2009),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" UBHC61833 6 257340 314934 57595 Loss 1 0.882021 92 632 chas 65.26 Loss 0 - 0 - Loss-- 32 100 Loss "BS,GTC" "ChAS,IPN" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57595(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 32 - 0 "57595(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" YKWT45889 6 257340 314934 57595 Gain 3 0.873692 92 632 chas 0 - 35.39 Gain 0 - -Gain- 32 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57595(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 32 - 0 "57595(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes affy6_no 400094RS male "research_filter, clinical_filter" OSRU53198 6 93536687 93594277 57591 Loss 1 0.914325 57 1028 chas 88.15 Loss 93.9 Loss 93.89 Loss LossLossLoss 98 88.09 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "57591(17|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Matsuzaki(2009),McCarroll(2008),McCarroll(2005),Jakobsson(2008),Shaikh(2009))" - - 98 - 0 "57591(39|Conrad(2009),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Campbell(2011),Conrad(2006),Durbin(2010),Altshuler(2010),Perry(2008b),Pinto(2011),Redon(2006),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400854SG male "research_filter, clinical_filter" GBOO31083 10 48117190 48174779 57590 Gain 4 0.950074 8 8227 chas 0 - 100 Gain 0 - -Gain- 1 NA NA NA "ChAS,NXS" 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 400282RA female research_filter PVOR72227 10 48117190 48174779 57590 Loss 1 0.886017 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400870KC female - GYNG28087 10 48117190 48174779 57590 Loss 1 0.891086 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400520FM female - EHLK43437 10 48117190 48174779 57590 Loss 1 0.890389 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401192MJ male - FOMC40154 10 48117190 48174779 57590 Loss 1 0.903153 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401096SL male - BNID76344 10 48117190 48174779 57590 Loss 1 0.898682 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400994HJ male - FPHR45460 10 48117190 48174779 57590 Gain 4 0.942385 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401104DM female - VAOW46427 10 48117190 48174779 57590 Loss 1 0.890924 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400528LR male - EXZC47846 10 48117190 48174779 57590 Gain 4 0.943304 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400468OB female - LETQ64470 10 48117190 48174779 57590 Loss 1 0.912304 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401812HG male - TBRP43796 10 48117190 48174779 57590 Loss 1 0.913907 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401894PD male - QCXI89270 10 48117190 48174779 57590 Loss 1 0.899364 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400558BL female - ORXH15927 10 48117190 48174779 57590 Loss 1 0.886746 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400266BA female - FNEG58263 10 48117190 48174779 57590 Loss 1 0.896429 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400836LK male - VLMR80827 10 48117190 48174779 57590 Loss 1 0.897059 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401630MK female - WZBZ52169 10 48117190 48174779 57590 Loss 1 0.892205 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401619BT female - NQBM70678 10 48117190 48174779 57590 Loss 1 0.893523 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400084DM female - LLZZ76842 10 48117190 48174779 57590 Gain 4 0.942842 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400354TJ female - BMGG13461 10 48117190 48174779 57590 Loss 1 0.898155 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400002HK female - AIRH51991 10 48117190 48174779 57590 Loss 1 0.887711 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400236DB_1 male - ZRAK81940 10 48117190 48174779 57590 Loss 1 0.892433 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401864CV female - USUN51593 10 48117190 48174779 57590 Loss 1 0.888276 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400199SA_1 male - OAZH14211 10 48117190 48174779 57590 Loss 1 0.89368 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400246MG male - BOER26307 10 48117190 48174779 57590 Loss 1 0.915744 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400571WV female - TASV63603 10 48117190 48174779 57590 Loss 1 0.885185 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400255CD male - TTBC76525 10 48117190 48174779 57590 Loss 1 0.886413 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400371GA female - GQSZ37539 10 48117190 48174779 57590 Loss 1 0.917158 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400455SJ female - GEZQ95890 10 48117190 48174779 57590 Loss 1 0.893984 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401487FW male - UCHK30425 10 48117190 48174779 57590 Loss 1 0.898161 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400385LJ female - GNXG93257 10 48117190 48174779 57590 Loss 1 0.897548 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400108BJ female - QXAY99372 10 48117190 48174779 57590 Loss 1 0.898532 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400040CN male - JSIF57066 10 48117190 48174779 57590 Loss 1 0.877304 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400512LR female - VABQ19693 10 48117190 48174779 57590 Loss 1 0.907488 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400493KH male - GAAC71530 10 48117190 48174779 57590 Loss 1 0.875069 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400506GN female - AYLS39762 10 48117190 48174779 57590 Loss 1 0.91428 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400663MD female - NTSS59900 10 48117190 48174779 57590 Loss 1 0.890634 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400427SD male - YMTT86375 10 48117190 48174779 57590 Loss 1 0.903784 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400797ST male - CHSN35204 10 48117190 48174779 57590 Loss 1 0.887386 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400674CA male - CMHA46888 10 48117190 48174779 57590 Loss 1 0.892437 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400825TW male - YBGD61325 10 48117190 48174779 57590 Gain 4 0.932807 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400543CK male - OLST13930 10 48117190 48174779 57590 Loss 1 0.896803 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400007RG female - WVAB12930 10 48117190 48174779 57590 Loss 1 0.896963 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400655WB female - HOIC14625 10 48117190 48174779 57590 Loss 1 0.884068 8 8227 chas 0 - 0 - 0 - --- 1 0 - - ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400619MP male - JHGL98054 10 48117190 48174779 57590 Loss 1 0.888765 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400368SD female - XUMQ23395 10 48117190 48174779 57590 Loss 1 0.890738 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401875FG male - MUBF17546 10 48117190 48174779 57590 Loss 1 0.895952 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400540BM male - VWYL75938 10 48117190 48174779 57590 Loss 1 0.90617 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401006ES female - FJSF95972 10 48117190 48174779 57590 Loss 1 0.894525 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401020DJ female - IWPA56866 10 48117190 48174779 57590 Loss 1 0.897258 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401700BN_1 female - IFUE20361 10 48117190 48174779 57590 Loss 1 0.894093 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401834CB female - UBGH15538 10 48117190 48174779 57590 Loss 1 0.887842 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401266HM female - QYVK49015 10 48117190 48174779 57590 Loss 1 0.884983 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401494PD male - ZCOM63077 10 48117190 48174779 57590 Loss 1 0.883067 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401936BA male - RJMG42549 10 48117190 48174779 57590 Loss 1 0.899708 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400749VW male - GVUJ86973 10 48117190 48174779 57590 Loss 1 0.895853 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400914ER male - TPDE39419 10 48117190 48174779 57590 Loss 1 0.899364 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401369GR male - IWRE15730 10 48117190 48174779 57590 Loss 1 0.905721 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402054BD male - LVBF79370 10 48117190 48174779 57590 Loss 1 0.902351 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401287CF male - JIVU24920 10 48117190 48174779 57590 Loss 1 0.896259 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400168HC female - SEZK29585 10 48117190 48174779 57590 Gain 4 0.929718 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401428LD female - QBXB16173 10 48117190 48174779 57590 Loss 1 0.892492 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402052ZA male - BWEV96807 10 48117190 48174779 57590 Loss 1 0.902633 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402012RR male - RPJZ72910 10 48117190 48174779 57590 Loss 1 0.894415 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401395OP male - SEHC73357 10 48117190 48174779 57590 Loss 1 0.912855 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402019MC male - XQAG43010 10 48117190 48174779 57590 Loss 1 0.891873 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400953MR female - GXLR90543 10 48117190 48174779 57590 Loss 1 0.895716 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401330RR female - NVMX58254 10 48117190 48174779 57590 Loss 1 0.894785 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 402060PD female - CQAD90614 10 48117190 48174779 57590 Loss 1 0.897324 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401346FJ female - SURU67526 10 48117190 48174779 57590 Loss 1 0.914535 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400675HC female - SPYW97422 10 48117190 48174779 57590 Loss 1 0.903148 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400899NK female - TPCN38834 10 48117190 48174779 57590 Loss 1 0.874524 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400879DS female - FCIS19557 10 48117190 48174779 57590 Loss 1 0.887421 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401931JL female - QBLX62038 10 48117190 48174779 57590 Loss 1 0.877358 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401681MS female - NFIQ53983 10 48117190 48174779 57590 Loss 1 0.898104 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401719RL female - SJFM69248 10 48117190 48174779 57590 Loss 1 0.893023 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401655DC male - FRXS36515 10 48117190 48174779 57590 Gain 4 0.945863 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400769SL female - FDGT59945 10 48117190 48174779 57590 Loss 1 0.908603 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401475MK male - EHXC97365 10 48117190 48174779 57590 Loss 1 0.897328 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401415CB male - CHNV74218 10 48117190 48174779 57590 Loss 1 0.890931 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400837HN female - TNZB91328 10 48117190 48174779 57590 Loss 1 0.898054 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400911GA female - LOAP92341 10 48117190 48174779 57590 Loss 1 0.88882 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401554VN male - DHFF12670 10 48117190 48174779 57590 Loss 1 0.891207 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401252AE male - UEII10946 10 48117190 48174779 57590 Gain 4 0.929155 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401913GT male - UDNO19569 10 48117190 48174779 57590 Gain 4 0.933821 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401766MR male - VUUO47049 10 48117190 48174779 57590 Loss 1 0.890274 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400533BB female - PNEQ37885 10 48117190 48174779 57590 Loss 1 0.897331 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401781SL male - FPUC66465 10 48117190 48174779 57590 Loss 1 0.895073 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400827MM male - DUXB26784 10 48117190 48174779 57590 Loss 1 0.914676 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401519SA female - DMKI43381 10 48117190 48174779 57590 Loss 1 0.888155 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400763BT female - TGEC92715 10 48117190 48174779 57590 Loss 1 0.890908 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 4000046CJ female - BTJZ41884 10 48117190 48174779 57590 Loss 1 0.901994 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400068PW female - YPPO84595 10 48117190 48174779 57590 Loss 1 0.912805 8 8227 chas 0 - 0 - 0 - --- 1 NA NA NA ChAS 10q11.22 - CTSL1P2 1 CTSL1P2 1 - - - "57590(14|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Park(2010),Shaikh(2009))" - 100 1 - 0 "57590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),Ju(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401857VG male - TOTG24684 4 101831244 101888792 57549 Loss 1 0.933652 48 1224 chas 88.27 Loss 92.44 Loss 90.4 Loss LossLossLoss 38 92.69 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q24 - - 0 - 0 - - - - - - 38 - 0 338(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 401764JJ male "research_filter, clinical_filter" LJOH21233 2 130817326 130874863 57538 Loss 1 0.872148 23 2615 chas 0 - 15.22 Loss 0 - -Loss- 14 NA NA NA "ChAS,NXS" 2q21.1 - POTEF 1 POTEF 1 - - - "57538(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 14 - 0 "57538(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400829MR male research_filter FGSE34256 1 246907280 246964774 57495 Gain 3 0.893293 106 547 chas 85.99 Gain 75.95 Gain 99.28 Gain GainGainGain 68 NA NA NA "ChAS,IPN,NXS,PTK" 1q44 - "SCCPDH,LOC149134" 2 "SCCPDH,LOC149134" 2 - - - "7601(2|McKernan(2009),Redon(2006))" "1682(5|Conrad(2009),Levy(2007),Bentley(2008),McKernan(2009),Mills(2006))" - 68 - 0 "57495(23|Teague(2010),Redon(2006),Conrad(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 401646MC female "research_filter, clinical_filter" ERKP22336 2 35944777 36002148 57372 Gain 3 0.8721 30 1978 chas 20.41 Gain 0 - 0 - Gain-- 34 NA NA NA "ChAS,IPN" 2p22.3 - - 0 - 0 - - - "57372(26|Itsara(2009),Korbel(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Shaikh(2009))" - - 34 - 0 "57372(107|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Park(2010),Pang(2010),Kidd(2008),Wilson(2010),Korbel(2007),Conrad(2009),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401726LW female research_filter XOQW96687 16 32848891 32906257 57367 Gain 3 0.884321 50 1170 chas 0 - 0 - 0 - --- 19 NA NA NA ChAS 16p11.2 - SLC6A10P 1 SLC6A10P 1 - - - "57367(19|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 100 19 - 0 "57367(121|Sebat(2004),Korbel(2007),Perry(2008),Conrad(2009),Alkan(2009),Campbell(2011),Park(2010),Durbin(2010),Locke(2006),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400121PL female clinical_filter JGYN82468 3 28947527 29004867 57341 Loss 1 0.90865 40 1470 chas 99.89 Loss 89 Loss 96.5 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 3p24.1 - - 0 - 0 - - - - - - 37 - 0 5502(12|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400722OM female "research_filter, clinical_filter" MQVK42355 11 89492877 89550211 57335 Loss 1 0.902744 22 2730 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "57335(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 11 - 0 "57335(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 401203MP female - QRNV11451 14 55626197 55683496 57300 Gain 3 0.898039 32 1848 chas 97.79 Gain 97.98 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 14q22.3 - DLGAP5 1 DLGAP5 1 - - - - - - 24 - 0 2627(4|Durbin(2010)) FALSE TRUE ipn_yes algo_yes NA 401918CA male research_filter AQKH94698 2 130817326 130874614 57289 Loss 1 0.876024 22 2728 chas 0 - 0 - 0 - --- 14 10.32 Loss BS ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57289(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 14 - 0 "57289(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400955BE male - UEII10946 2 202306348 202363619 57272 Gain 3 0.892601 36 1636 chas 70.4 Gain 87.34 Gain 0 - GainGain- 16 NA NA NA "ChAS,IPN,NXS" 2q33.1 - "TRAK2,STRADB,ALS2CR11" 3 "TRAK2,STRADB,ALS2CR11" 3 - "57272#1%""2q33.1 deletion syndrome"":8281852" - - - - 16 - 0 "57272(2|Kidd(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401913GT male research_filter IZZO20602 15 34929955 34987226 57272 Loss 1 0.926412 46 1272 chas 83.56 Loss 78.93 Loss 100 Loss LossLossLoss 62 NA NA NA "ChAS,IPN,NXS,PTK" 15q14 - - 0 - 0 - - - "55037(6|Itsara(2009),Pinto(2007),Redon(2006),Shaikh(2009),Zogopoulos(2007))" "644(2|Wang(2008),Bentley(2008))" 5 62 - 0 "57272(33|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Bentley(2008),Wang(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" QRST17911 10 18166364 18223634 57271 Loss 1 0.872608 12 5206 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 10p12.33 - MRC1 1 MRC1 1 - - - - - 96 5 - 0 "57271(7|Teague(2010),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401016IT male - ICDL89338 6 29864509 29921739 57231 Loss 1 0.897768 31 1907 chas 55.1 Loss 78.97 Loss 0 - LossLoss- 49 47.64 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57231(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57231(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400977SC female "research_filter, clinical_filter" KWJN47187 6 29864509 29921739 57231 Loss 1 0.885726 31 1907 chas 55.1 Loss 59.28 Loss 59.28 Loss LossLossLoss 49 0 - - "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57231(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57231(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400821FE female "research_filter, clinical_filter" IAMC34091 6 29864509 29921739 57231 Loss 1 0.894628 31 1907 chas 36.78 Loss 0 - 0 - Loss-- 49 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57231(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57231(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 402067KS female "research_filter, clinical_filter" LOOD16085 6 29864509 29921739 57231 Loss 1 0.879019 31 1907 chas 36.78 Loss 12.19 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57231(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57231(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400376SJ female "research_filter, clinical_filter" CVUT48167 6 29864509 29921739 57231 Loss 1 0.891433 31 1907 chas 36.8 Loss 0 - 0 - Loss-- 49 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57231(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57231(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401898DS male "research_filter, clinical_filter" XMVT70735 1 72759531 72816755 57225 Gain 3 0.896411 34 1734 chas 0 - 0 - 0 - --- 54 74.67 Gain "BS,GTC" ChAS 1p31.1 - - 0 - 0 - - - "57225(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 54 - 0 "57225(274|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 401873BK male - KSUK43841 6 95509861 95567067 57207 Loss 1 0.90293 48 1217 chas 95.76 Loss 91.81 Loss 91.81 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "57207(5|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 44 - 0 "57207(13|Itsara(2009),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401762SD male "research_filter, clinical_filter" KAAS48951 6 257742 314934 57193 Gain 3 0.888233 90 642 chas 0 - 71.37 Gain 0 - -Gain- 31 NA NA NA "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "57193(16|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" - - 31 - 0 "57193(51|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Perry(2008b),Park(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_no algo_yes NA 401504RJ male "research_filter, clinical_filter" RFXX95002 6 30693816 30751001 57186 Gain 3 0.902819 42 1394 chas 93.07 Gain 91.38 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 6p21.33 - "FLOT1,IER3" 2 "FLOT1,IER3" 2 - - - - "773(2|Conrad(2009),Wheeler(2008))" - 21 - 0 "57186(10|Conrad(2009),Wong(2007),Redon(2006),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401773AM male research_filter VVPL10652 7 38294983 38352147 57165 Loss 1 0.862038 76 762 chas 0 - 51.95 Loss 0 - -Loss- 85 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "57165(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 41 85 - 0 "57165(51|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400871CM female "research_filter, clinical_filter" FNMA81925 6 29864578 29921739 57162 Loss 1 0.902244 30 1971 chas 61.35 Loss 61.39 Loss 100 Loss LossLossLoss 49 0 - - "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400171BJ male "research_filter, clinical_filter" MWRB65708 6 29864578 29921739 57162 Loss 1 0.897557 30 1971 chas 30.54 Loss 56.33 Loss 0 - LossLoss- 49 47.69 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400267GD female "research_filter, clinical_filter" IRJE88693 6 29864578 29921739 57162 Loss 1 0.892525 30 1971 chas 55.16 Loss 61.39 Loss 0 - LossLoss- 49 47.69 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" KEHV72339 6 29864578 29921739 57162 Loss 1 0.894566 30 1971 chas 61.35 Loss 29.3 Loss 66.8 Loss LossLossLoss 49 52.37 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400733SW male "research_filter, clinical_filter" AQKH94698 6 29864578 29921739 57162 Loss 1 0.895852 30 1971 chas 61.35 Loss 36.6 Loss 69.36 Loss LossLossLoss 49 47.69 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" CMHA46888 6 29864578 29921739 57162 Loss 1 0.881762 30 1971 chas 61.35 Loss 36.6 Loss 68.91 Loss LossLossLoss 49 47.69 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400825TW male "research_filter, clinical_filter" TTCB91135 6 29864578 29921739 57162 Loss 1 0.886536 30 1971 chas 61.35 Loss 29.3 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401376RD male "research_filter, clinical_filter" SMGW17663 6 29864578 29921739 57162 Loss 1 0.887468 30 1971 chas 36.73 Loss 56.33 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" VUND65965 6 29864578 29921739 57162 Loss 1 0.88429 30 1971 chas 36.73 Loss 0 - 0 - Loss-- 49 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401498HH male "research_filter, clinical_filter" SBJN54268 6 29864578 29921739 57162 Loss 1 0.896252 30 1971 chas 36.73 Loss 0 - 0 - Loss-- 49 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "57162(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 49 - 0 "57162(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400343BD female "research_filter, clinical_filter" ZIOC12306 2 130817326 130874476 57151 Loss 1 0.891085 21 2857 chas 0 - 68.73 Loss 100 Loss #NAME? 14 10.34 Loss BS "ChAS,NXS,PTK" 2q21.1 - POTEF 1 POTEF 1 - - - "57151(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57151(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes affy6_yes 400852WJ male research_filter NQBM70678 2 130817326 130874476 57151 Loss 1 0.875193 21 2857 chas 0 - 0 - 0 - --- 14 10.34 Loss BS ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57151(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57151(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400084DM female - QWII30838 2 130817326 130874476 57151 Loss 1 0.88168 21 2857 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57151(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57151(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 402061PI female - RBTV68848 2 130817326 130874476 57151 Loss 1 0.877528 21 2857 chas 0 - 0 - 0 - --- 14 NA NA NA ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57151(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57151(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401182OC male - OGJP80646 2 130817326 130874475 57150 Loss 1 0.883763 20 3007 chas 0 - 14.74 Loss 100 Loss #NAME? 13 NA NA NA "ChAS,NXS,PTK" 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400704LC female research_filter NWRU68440 2 130817326 130874475 57150 Loss 1 0.882899 20 3007 chas 0 - 0 - 100 Loss #NAME? 13 NA NA NA "ChAS,PTK" 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401064FR male research_filter DLYI64271 2 130817326 130874475 57150 Loss 1 0.875781 20 3007 chas 0 - 14.74 Loss 0 - -Loss- 13 NA NA NA "ChAS,NXS" 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401292ER female research_filter YKWT45889 2 130817326 130874475 57150 Loss 1 0.879534 20 3007 chas 0 - 0 - 0 - --- 13 10.34 Loss BS ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400094RS male - ZKED26020 2 130817326 130874475 57150 Loss 1 0.883831 20 3007 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 401652HL female - CHNV74218 2 130817326 130874475 57150 Loss 1 0.869422 20 3007 chas 0 - 0 - 0 - --- 13 NA NA NA ChAS 2q21.1 - POTEF 1 POTEF 1 - - - "57150(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 13 - 0 "57150(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400837HN female - XNCW62958 5 170491307 170548441 57135 Gain 3 0.912752 92 627 chas 99.92 Gain 100 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 5q35.1 - RANBP17 1 - 0 - - - - - - 24 - 0 "57135(4|Teague(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401490TL male "research_filter, clinical_filter" GUWW37548 7 72215275 72272343 57069 Loss 1 0.903569 18 3357 chas 17.82 Loss 88.3 Loss 88.3 Loss LossLossLoss 23 88.49 Loss "GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.23 - TYW1B 1 TYW1B 1 - - - "57069(20|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),McCarroll(2008),Mills(2006))" - 74 23 - 0 "57069(107|Wang(2007),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Kidd(2008),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Locke(2006),Conrad(2009),McCarroll(2008),Jakobsson(2008),Kidd(2010b),Perry(2008b),Park(2010),Pinto(2007),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401195PN male research_filter JMWD59875 7 86214129 86271166 57038 Loss 1 0.928686 36 1629 chas 85.75 Loss 92.85 Loss 92.86 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 7q21.11 - - 0 - 0 - - - "14483(5|Park(2010),Ju(2010),McCarroll(2008),Kim(2009),Altshuler(2010))" - - 37 - 0 "48612(13|Ju(2010),Wong(2007),Durbin(2010),Altshuler(2010),Campbell(2011),Park(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402048WB female "research_filter, clinical_filter" IGQR94047 11 55374019 55431052 57034 Loss 1 0.854893 65 891 chas 99.98 Loss 0 - 0 - Loss-- 45 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 57034(1|Korbel(2007)) "57034(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "57034(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400060MC female "research_filter, clinical_filter" FEZX98083 11 55374019 55431051 57033 Gain 3 0.879557 64 905 chas 0 - 56.48 Gain 0 - -Gain- 44 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 57033(1|Korbel(2007)) "57033(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 44 - 0 "57033(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400106PC male "research_filter, clinical_filter" OZXZ40778 5 177197942 177254952 57011 Gain 4 0.911476 15 4072 chas 0 - 0 - 0 - --- 5 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "57011#1%""Sotos syndrome"":2326144" - "57011(10|Kidd(2008),McCarroll(2008),Altshuler(2010),Shaikh(2009),Conrad(2009))" - 100 5 - 0 "57011(33|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 400123WN male - PSUS84601 20 29436789 29493798 57010 Loss 1 0.879518 18 3353 chas 0 - 0 - 0 - --- 20 100 Loss BS ChAS 20q11.21 - - 0 - 0 - - - "57010(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 20 - 0 "57010(14|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no affy6_yes 401021SC female - IRJE88693 20 29436789 29493798 57010 Loss 1 0.888784 18 3353 chas 0 - 0 - 0 - --- 20 100 Loss "BS,IP6" ChAS 20q11.21 - - 0 - 0 - - - "57010(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 20 - 0 "57010(14|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_no affy6_yes 400739SS_1 female - TTBC76525 4 167514895 167571890 56996 Gain 3 0.88907 39 1499 chas 35.34 Gain 87.8 Gain 0 - GainGain- 28 87.81 Gain "BS,GTC" "ChAS,IPN,NXS" 4q32.3 - - 0 - 0 - - - - - - 28 - 0 "56996(4|Teague(2010),Wong(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400371GA female research_filter AXFF10000 3 46802232 46859141 56910 Loss 1 0.899815 45 1293 chas 83.21 Loss 72.99 Loss 82.79 Loss LossLossLoss 38 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56910(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 38 - 0 "56910(104|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),Teague(2010),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400272AE male "research_filter, clinical_filter" IEKT57966 21 26757643 26814544 56902 Loss 1 0.908791 64 903 chas 99.71 Loss 99.84 Loss 99.84 Loss LossLossLoss 39 NA NA NA "ChAS,IPN,NXS,PTK" "21q21.2,21q21.3" - LINC00158 1 LINC00158 1 - - - - - - 38 - 0 287(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400274TL female "research_filter, clinical_filter" KRCX57170 X 6533310 6590198 56889 Loss 0 0.945477 80 720 chas 98.2 Loss 0 - 0 - Loss-- 42 98.08 Loss "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - - 0 - 0 - "56889#1%""Steroid sulphatase deficiency (STS)"":1725741" - "56889(7|Wang(2007),Pinto(2007),Redon(2006),Shaikh(2009),Simon-Sanchez(2007))" - - 42 - 0 "56889(8|Wang(2007),Pinto(2007),Redon(2006),Durbin(2010),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" NLDQ95097 X 76321795 76378644 56850 Loss 1 0.871256 23 2584 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 7 - 0 56850(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400091BS female - PYXL51166 X 76321796 76378644 56849 Loss 1 0.88611 22 2707 chas 0 - 0 - 0 - --- 8 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 7 - 0 56849(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401146US female - TUWR15724 X 103179508 103236332 56825 Gain 2 0.922878 46 1262 chas 100 Gain 0 - 0 - Gain-- 32 77.8 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 60 32 - 0 "56825(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 401207DA male research_filter DOIH36842 11 134153875 134210663 56789 Gain 3 0.897627 68 847 chas 90.79 Gain 100 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 11q25 - "GLB1L2,GLB1L3" 2 "GLB1L2,GLB1L3" 2 - - - "56789(18|Jakobsson(2008),Matsuzaki(2009),Itsara(2009),McKernan(2009),Simon-Sanchez(2007),Park(2010),Shaikh(2009))" - - 36 - 0 "56789(32|Wong(2007),Jakobsson(2008),Itsara(2009),McKernan(2009),Durbin(2010),Simon-Sanchez(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" ZMNN35179 4 67530604 67587380 56777 Loss 1 0.910151 19 3154 chas 55.38 Loss 77.58 Loss 0 - LossLoss- 18 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - 1674(1|McKernan(2009)) 298(1|Bentley(2008)) - 18 - 0 "1674(11|McKernan(2009),Durbin(2010),Bentley(2008))" FALSE TRUE ipn_yes algo_yes NA 400430KV male research_filter AQKH94698 7 117528127 117584902 56776 Gain 3 0.890453 44 1320 chas 94.41 Gain 97.19 Gain 0 - GainGain- 38 93.51 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 7q31.31 - - 0 - 0 - - - - - - 38 - 0 56776(2|Kidd(2008)) FALSE TRUE ipn_yes algo_yes affy6_yes 400955BE male research_filter QEPL68818 11 48792690 48849435 56746 Loss 1 0.930611 10 6305 chas 0 - 0 - 0 - --- 10 NA NA NA ChAS "11p11.12,11p11.2" - - 0 - 0 - - - "56746(10|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Pinto(2007),Cooper(2008),Wheeler(2008),Kim(2009))" 172(1|Levy(2007)) - 10 - 0 "56746(133|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Levy(2007),Durbin(2010),Pinto(2007),Cooper(2008),Pinto(2011),Kim(2009))" FALSE TRUE ipn_no algo_no NA 402028BD male - VUUO47049 X 141062170 141118896 56727 Loss 1 0.907014 44 1319 chas 80.95 Loss 0 - 0 - Loss-- 59 NA NA NA "ChAS,IPN" Xq27.2 - - 0 - 0 - - - 44833(1|Shaikh(2009)) - - 59 - 0 "56727(6|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400533BB female "research_filter, clinical_filter" HUDD82297 X 101744585 101801292 56708 Gain 2 0.931952 56 1031 chas 99.98 Gain 0 - 0 - Gain-- 32 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.1 - TMSB15A 1 TMSB15A 1 - - - - - 1 32 - 0 43169(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 400782IE male "research_filter, clinical_filter" VKGU19422 8 119781980 119838685 56706 Gain 3 0.900634 32 1829 chas 99.98 Gain 100 Gain 0 - GainGain- 35 NA NA NA "ChAS,IPN,NXS" 8q24.12 - - 0 - 0 - - - - - - 35 - 0 56706(1|Wong(2007)) FALSE TRUE ipn_yes algo_yes NA 400778SR female research_filter FXID76383 1 144896431 144953099 56669 Gain 3 0.874737 98 584 chas 22.2 Gain 26.65 Gain 0 - GainGain- 40 4.67 Gain IP6 "ChAS,IPN,NXS" 1q21.1 - PDE4DIP 1 PDE4DIP 1 - - - "56669(17|Sebat(2004),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Bentley(2008),Pang(2010),Kidd(2008),Tuzun(2005),Park(2010),Wheeler(2008),Ju(2010))" 113(1|Ahn(2009)) 45 40 - 0 "56669(76|Teague(2010),Ahn(2009),Korbel(2007),Ju(2010),Perry(2008),Kidd(2010b),Sharp(2005),Tuzun(2005),Park(2010),Locke(2006),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Wong(2007),Durbin(2010),Sebat(2004),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" OCVA11195 X 140609657 140666276 56620 Gain 2 0.867797 11 5662 chas 0 - 0 - 0 - --- 2 NA NA NA ChAS Xq27.2 - SPANXA2-OT1 1 - 0 - - 56620(1|Kidd(2008)) "56620(10|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 100 2 - 0 "56620(17|Conrad(2009),Jakobsson(2008),Perry(2008),Sharp(2005),Durbin(2010),Kidd(2008),Locke(2006),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401358VP male - ZMNN35179 15 23620192 23676783 56592 Loss 1 0.895476 41 1414 chas 89.61 Loss 0 - 95.47 Loss Loss-Loss 13 NA NA NA "ChAS,IPN,PTK" 15q11.2 - - 0 - 0 - "56592#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56592(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56592(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400430KV male "research_filter, clinical_filter" LYLG55293 2 193381766 193438323 56558 Loss 1 0.927358 40 1450 chas 92.53 Loss 96.21 Loss 96.21 Loss LossLossLoss 33 92.77 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q32.3 - - 0 - 0 - - - 3137(1|Matsuzaki(2009)) 449(1|Matsuzaki(2009)) - 33 - 0 5720(10|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" EHXC97365 8 2127154 2183673 56520 Loss 1 0.919573 34 1712 chas 92.27 Loss 92.57 Loss 0 - LossLoss- 48 NA NA NA "ChAS,IPN,NXS" 8p23.3 - - 0 - 0 - - 10357(1|Pang(2010)) "56520(33|Sebat(2004),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),Itsara(2009),Kidd(2008),Conrad(2009),Pinto(2007),Shaikh(2009),Park(2010),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" "1055(4|Wang(2008),Levy(2007),Matsuzaki(2009))" 6 48 - 0 "56520(79|Sebat(2004),Korbel(2007),Redon(2006),Conrad(2009),Teague(2010),Wang(2008),Bentley(2008),Pang(2010),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),Simon-Sanchez(2007),Wang(2007),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),McCarroll(2008),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" QRST17911 5 177198436 177254952 56517 Gain 4 0.92566 14 4347 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 5q35.3 - FAM153A 1 FAM153A 1 - "56517#1%""Sotos syndrome"":2326144" - "56517(10|Kidd(2008),McCarroll(2008),Altshuler(2010),Shaikh(2009),Conrad(2009))" - 100 4 - 0 "56517(33|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401016IT male - WMOD47474 Y 27739163 27795671 56509 Gain 2 0.845538 120 474 chas 100 Gain 0 - 0 - Gain-- 24 NA NA NA "ChAS,IPN" Yq11.23 - "CDY1B,CDY1" 2 "CDY1B,CDY1" 2 - "56509#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "56509(2|McCarroll(2008),Perry(2008))" - 100 24 - 0 "56509(5|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401489CB male "research_filter, clinical_filter" ZQHJ50767 3 46793072 46849576 56505 Loss 1 0.906895 48 1202 chas 84.53 Loss 99.67 Loss 99.67 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" IPKK73915 3 46793072 46849576 56505 Loss 1 0.897303 48 1202 chas 81.49 Loss 83.02 Loss 99.72 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400999HR male "research_filter, clinical_filter" FSQK31243 3 46793072 46849576 56505 Loss 1 0.907349 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400863SS female "research_filter, clinical_filter" WUMM65746 3 46793072 46849576 56505 Loss 1 0.905827 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 84.02 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" WCSO50334 3 46793072 46849576 56505 Loss 1 0.894759 48 1202 chas 84.53 Loss 71.74 Loss 91.99 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400073HT male "research_filter, clinical_filter" CLWS25417 3 46793072 46849576 56505 Loss 1 0.891099 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401661HD male "research_filter, clinical_filter" VABQ19693 3 46793072 46849576 56505 Loss 1 0.922969 48 1202 chas 84.53 Loss 91.95 Loss 91.95 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" IAEL45337 3 46793072 46849576 56505 Loss 1 0.931692 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 99.48 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" WVAB12930 3 46793072 46849576 56505 Loss 1 0.897038 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 84.02 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400655WB female "research_filter, clinical_filter" YSLM40888 3 46793072 46849576 56505 Loss 1 0.91343 48 1202 chas 84.53 Loss 91.95 Loss 91.95 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400460DM female "research_filter, clinical_filter" GPMX61747 3 46793072 46849576 56505 Loss 1 0.915293 48 1202 chas 84.53 Loss 91.58 Loss 91.58 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" NCJU46793 3 46793072 46849576 56505 Loss 1 0.911394 48 1202 chas 84.53 Loss 91.58 Loss 91.95 Loss LossLossLoss 42 84.02 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400061DE female "research_filter, clinical_filter" EMKM20452 3 46793072 46849576 56505 Loss 1 0.892027 48 1202 chas 84.53 Loss 91.95 Loss 0 - LossLoss- 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" EZDG77492 3 46793072 46849576 56505 Loss 1 0.893728 48 1202 chas 84.53 Loss 91.95 Loss 91.95 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400308SP male "research_filter, clinical_filter" DUEF32956 3 46793072 46849576 56505 Loss 1 0.91083 48 1202 chas 84.53 Loss 91.95 Loss 91.95 Loss LossLossLoss 42 84.54 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401190WC male "research_filter, clinical_filter" BKFI83925 3 46793072 46849576 56505 Loss 1 0.896 48 1202 chas 84.53 Loss 91.95 Loss 91.95 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" NVDU55912 3 46793072 46849576 56505 Loss 1 0.908773 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401307VR male "research_filter, clinical_filter" WHOU87472 3 46793072 46849576 56505 Loss 1 0.897556 48 1202 chas 84.53 Loss 99.67 Loss 99.67 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" WMBQ46007 3 46793072 46849576 56505 Loss 1 0.91513 48 1202 chas 84.53 Loss 91.58 Loss 99.59 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401230NL female "research_filter, clinical_filter" VGND49817 3 46793072 46849576 56505 Loss 1 0.913129 48 1202 chas 84.53 Loss 90.88 Loss 90.88 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" TZXJ50703 3 46793072 46849576 56505 Loss 1 0.913385 48 1202 chas 84.53 Loss 91.58 Loss 91.58 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400978JG female "research_filter, clinical_filter" AXWL27269 3 46793072 46849576 56505 Loss 1 0.903687 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401962BK female "research_filter, clinical_filter" OULL87238 3 46793072 46849576 56505 Loss 1 0.908952 48 1202 chas 84.53 Loss 90.88 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401845MJ male "research_filter, clinical_filter" IOGU88526 3 46793072 46849576 56505 Loss 1 0.907567 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401623SN male "research_filter, clinical_filter" GVAB34760 3 46793072 46849576 56505 Loss 1 0.919987 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400453LN male "research_filter, clinical_filter" QMDZ51984 3 46793072 46849576 56505 Loss 1 0.90378 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401979TB male "research_filter, clinical_filter" MQVK42355 3 46793072 46849576 56505 Loss 1 0.912189 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401203MP female "research_filter, clinical_filter" ICCB48361 3 46793072 46849576 56505 Loss 1 0.903519 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401258PC female "research_filter, clinical_filter" ROFY65487 3 46793072 46849576 56505 Loss 1 0.905527 48 1202 chas 84.53 Loss 91.99 Loss 91.99 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56505(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56505(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400683EC female "research_filter, clinical_filter" IAEL45337 6 29864578 29921061 56484 Loss 1 0.889369 28 2092 chas 55.82 Loss 22.48 Loss 79.88 Loss LossLossLoss 46 48.26 Loss IP6 "ChAS,IPN,NXS,PTK" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "56484(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 46 - 0 "56484(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" QKWF92816 6 29864578 29921061 56484 Loss 1 0.881841 28 2092 chas 37.17 Loss 22.46 Loss 0 - LossLoss- 46 48.26 Loss IP6 "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "56484(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 46 - 0 "56484(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400295PS female "research_filter, clinical_filter" SBQG40276 6 29864578 29921061 56484 Loss 1 0.885139 28 2092 chas 37.17 Loss 0 - 0 - Loss-- 46 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "56484(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 46 - 0 "56484(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400145BL female "research_filter, clinical_filter" KWBM98824 6 29864578 29921061 56484 Loss 1 0.879563 28 2092 chas 37.17 Loss 21.87 Loss 0 - LossLoss- 46 NA NA NA "ChAS,IPN,NXS" 6p22.1 - "HLA-A,HCG4B" 2 "HLA-A,HCG4B" 2 HLA-A - - "56484(54|Ju(2010),Redon(2006),de Smith(2007),Pang(2010),Pinto(2007),Shaikh(2009),Matsuzaki(2009),Kidd(2008),Wang(2008),McCarroll(2008),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Conrad(2005),Perry(2008),Itsara(2009),Levy(2007),Gusev(2009),Altshuler(2010),Park(2010))" 1(1|Mills(2006)) 32 46 - 0 "56484(349|Ju(2010),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" OTMU34006 8 86458065 86514545 56481 Gain 3 0.908887 42 1377 chas 90.08 Gain 95.03 Gain 0 - GainGain- 37 NA NA NA "ChAS,IPN,NXS" 8q21.2 - - 0 - 0 - - - 5930(1|de Smith(2007)) - 8 36 - 0 "56481(10|Pinto(2011),Wong(2007),De(Smith_2007),Shaikh(2009),Perry(2008b))" FALSE TRUE ipn_yes algo_yes NA 402038MR male research_filter EXZC47846 13 64331214 64387677 56464 Gain 3 0.895667 43 1344 chas 74.2 Gain 79 Gain 0 - GainGain- 38 0 - - "ChAS,IPN,NXS" 13q21.31 - - 0 - 0 - - - "56464(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 80 38 - 0 "56464(9|Wong(2007),Redon(2006),Perry(2008),Kidd(2010b),Durbin(2010),Kidd(2008),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_no 400468OB female research_filter YWQF89241 11 54701512 54757916 56405 Gain 4 0.936043 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 99.76 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400509CJ female research_filter FEZX98083 11 54701512 54757916 56405 Gain 4 0.925374 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400106PC male research_filter AYKK27829 11 54701512 54757916 56405 Gain 4 0.942005 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 99.76 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400383HL female research_filter YKLI59783 11 54701512 54757916 56405 Gain 4 0.935193 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401919MD male research_filter KMMD77027 11 54701512 54757916 56405 Gain 4 0.926111 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400783MJ male research_filter GSWW54097 11 54701512 54757916 56405 Gain 4 0.924201 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401620BA female research_filter ICZT95489 11 54701512 54757916 56405 Gain 4 0.936296 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401386WA male research_filter ZEGT44347 11 54701512 54757916 56405 Gain 4 0.931052 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401609MB female research_filter OULL87238 11 54701512 54757916 56405 Gain 4 0.955241 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401845MJ male research_filter GLGF34868 11 54701512 54757916 56405 Gain 4 0.94408 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401268PS male research_filter LCVR91256 11 54701512 54757916 56405 Gain 4 0.942715 10 6267 chas 99.79 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401510DG male research_filter GHOG89686 11 54701512 54757916 56405 Gain 4 0.926648 10 6267 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401459HF male - ZDRZ89201 11 54701512 54757916 56405 Gain 4 0.909823 10 6267 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401855RE male - WDRZ91881 11 54701512 54757916 56405 Gain 4 0.934799 10 6267 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401426WD male - FPLE23103 11 54701512 54757916 56405 Gain 4 0.922077 10 6267 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56405(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56405(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400337HG male - SYHV89014 11 54701632 54758019 56388 Gain 4 0.936101 9 7048 chas 99.84 Gain 0 - 100 Gain Gain-Gain 4 NA NA NA "ChAS,IPN,PTK" 11q11 - - 0 - 0 - - - "56388(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 4 - 0 "56388(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400658BW male research_filter ERKP22336 11 54701632 54758019 56388 Gain 4 0.919026 9 7048 chas 99.84 Gain 0 - 0 - Gain-- 4 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56388(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 4 - 0 "56388(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401726LW female research_filter QRST17911 11 54701632 54758019 56388 Gain 4 0.926311 9 7048 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56388(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 4 - 0 "56388(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401016IT male - ZQHJ50767 5 68589973 68646354 56382 Gain 3 0.90074 44 1311 chas 83.77 Gain 88.95 Gain 0 - GainGain- 16 81.21 Gain IP6 "ChAS,IPN,NXS" 5q13.2 - CCDC125 1 CCDC125 1 - - - 56382(1|Sebat(2004)) - 2 16 - 0 "56382(5|Pinto(2011),Sebat(2004),Durbin(2010),Perry(2008b))" FALSE TRUE ipn_yes algo_yes affy6_yes 400888MS female research_filter AFNK41813 2 114324450 114380809 56360 Loss 1 0.893404 16 3757 chas 0 - 0 - 0 - --- 11 0 - - ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "52116(6|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "56360(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 401054VM female - ORNW53006 2 114324450 114380809 56360 Loss 1 0.87874 16 3757 chas 0 - 0 - 0 - --- 11 0 - - ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "52116(6|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "56360(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400494ML female - TCTA60809 2 114324450 114380809 56360 Loss 1 0.888632 16 3757 chas 0 - 0 - 0 - --- 11 NA NA NA ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "52116(6|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 9 - 0 "56360(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 401965TG female - AGBJ55549 10 46971945 47028298 56354 Loss 1 0.861324 72 793 chas 0 - 0 - 0 - --- 48 NA NA NA ChAS 10q11.22 - GPRIN2 1 GPRIN2 1 - - "17980(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "56354(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 48 - 0 "56354(182|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Ju(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_no NA 402016HZ male clinical_filter JYQV48819 15 23620192 23676512 56321 Loss 1 0.897564 40 1444 chas 90.04 Loss 85.25 Loss 85.25 Loss LossLossLoss 13 53.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400449PK female "research_filter, clinical_filter" KZTP77176 15 23620192 23676512 56321 Loss 1 0.894784 40 1444 chas 90.04 Loss 50.94 Loss 0 - LossLoss- 13 52.35 Loss "GTC,IP6" "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" IWPA56866 15 23620192 23676512 56321 Loss 1 0.913072 40 1444 chas 90.04 Loss 91.06 Loss 91.06 Loss LossLossLoss 13 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401700BN_1 female "research_filter, clinical_filter" BKFI83925 15 23620192 23676512 56321 Loss 1 0.904318 40 1444 chas 90.04 Loss 91.06 Loss 100 Loss LossLossLoss 13 NA NA NA "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" CAYM40684 15 23620192 23676512 56321 Loss 1 0.893157 40 1444 chas 90.04 Loss 61.51 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401986LC female "research_filter, clinical_filter" PCGN60952 15 23620192 23676512 56321 Loss 1 0.897374 40 1444 chas 90.04 Loss 91.06 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401364GM male "research_filter, clinical_filter" FNSQ39400 15 23620192 23676512 56321 Loss 1 0.907439 40 1444 chas 90.04 Loss 53.19 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400721DJ male "research_filter, clinical_filter" XUUY89365 15 23620192 23676512 56321 Loss 1 0.895046 40 1444 chas 90.04 Loss 54 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400846MC female "research_filter, clinical_filter" FSRW48279 15 23620192 23676512 56321 Loss 1 0.896989 40 1444 chas 90.04 Loss 0 - 0 - Loss-- 13 NA NA NA "ChAS,IPN" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401385BB male "research_filter, clinical_filter" NNNK99860 15 23620192 23676512 56321 Loss 1 0.907448 40 1444 chas 90.04 Loss 91.06 Loss 0 - LossLoss- 13 NA NA NA "ChAS,IPN,NXS" 15q11.2 - - 0 - 0 - "56321#2%""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 1)"":5680555" - "56321(18|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),Altshuler(2010),Kidd(2008),Pinto(2007),Wheeler(2008),Shaikh(2009))" 171(1|Ahn(2009)) 98 13 - 0 "56321(39|Teague(2010),Ahn(2009),Wong(2007),Ju(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Kidd(2008),Altshuler(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400439IM female "research_filter, clinical_filter" BWCN37814 5 180374484 180430797 56314 Gain 3 0.89615 41 1407 chas 98.55 Gain 67.84 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56314(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56314(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401966SR male research_filter GHOG89686 5 180374484 180430789 56306 Gain 3 0.889093 40 1443 chas 98.55 Gain 75.59 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401459HF male research_filter QSVT75164 5 180374484 180430789 56306 Gain 3 0.890692 40 1443 chas 98.55 Gain 76.6 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401791FG male research_filter FMEA92817 5 180374484 180430789 56306 Gain 3 0.892477 40 1443 chas 98.55 Gain 74.5 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401175FA female research_filter ATJL19217 5 180374484 180430789 56306 Gain 3 0.89963 40 1443 chas 98.55 Gain 95.47 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401608GE female research_filter QXHS37749 5 180374484 180430789 56306 Gain 3 0.899068 40 1443 chas 98.55 Gain 75.56 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401943KA male research_filter BTMS28214 5 180374484 180430789 56306 Gain 3 0.899637 40 1443 chas 98.55 Gain 74.5 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400526DR male research_filter TGEC92715 5 180374484 180430789 56306 Gain 3 0.912404 40 1443 chas 98.55 Gain 74.13 Gain 0 - GainGain- 21 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 4000046CJ female research_filter JPDY25055 5 180374484 180430789 56306 Gain 3 0.895398 40 1443 chas 0 - 76.05 Gain 0 - -Gain- 21 69.96 Gain "GTC,IP6" "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401102RD male research_filter JFSR33951 5 180374484 180430789 56306 Gain 3 0.899214 40 1443 chas 0 - 79.98 Gain 0 - -Gain- 21 0 - - "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56306(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 21 - 0 "56306(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400444MM female research_filter VDRD32700 10 68317781 68374084 56304 Loss 1 0.918702 66 866 chas 99.92 Loss 99.95 Loss 99.95 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 - 0 - - - "56304(4|Itsara(2009),Park(2010),Redon(2006),Shaikh(2009))" 1(1|Levy(2007)) - 44 - 0 "56304(24|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400271SR male "research_filter, clinical_filter" XTPE89033 11 54701620 54757916 56297 Gain 4 0.938326 9 7037 chas 99.98 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56297(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56297(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400817MB male research_filter MQVK42355 11 54701620 54757916 56297 Gain 4 0.94478 9 7037 chas 99.98 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56297(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56297(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401203MP female research_filter BQFC38547 11 54701632 54757916 56285 Gain 4 0.936543 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400238BB female research_filter VPWL90389 11 54701632 54757916 56285 Gain 4 0.960803 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 99.98 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401912HD male research_filter TZGC22320 11 54701632 54757916 56285 Gain 4 0.914108 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401295HB male research_filter QUHC56771 11 54701632 54757916 56285 Gain 4 0.922193 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400128MJ female research_filter LLZZ76842 11 54701632 54757916 56285 Gain 4 0.915228 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400354TJ female research_filter MWRB65708 11 54701632 54757916 56285 Gain 4 0.943634 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400267GD female research_filter ZRAK81940 11 54701632 54757916 56285 Gain 4 0.93872 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 99.98 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401864CV female research_filter RBBO63662 11 54701632 54757916 56285 Gain 4 0.94106 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401105WS male research_filter USUN51593 11 54701632 54757916 56285 Gain 4 0.911054 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 99.98 Gain BS "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male research_filter KRCX57170 11 54701632 54757916 56285 Gain 4 0.924787 8 8040 chas 100 Gain 0 - 100 Gain Gain-Gain 3 0 - - "ChAS,IPN,PTK" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401460LW male research_filter PTWY73614 11 54701632 54757916 56285 Gain 4 0.916406 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401540GM male research_filter TTBC76525 11 54701632 54757916 56285 Gain 4 0.931663 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400371GA female research_filter GYBK42448 11 54701632 54757916 56285 Gain 4 0.940638 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401277RA female research_filter PAGW82790 11 54701632 54757916 56285 Gain 4 0.926566 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400245SJ female research_filter WSYP96126 11 54701632 54757916 56285 Gain 4 0.917958 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400660GK male research_filter EMKM20452 11 54701632 54757916 56285 Gain 4 0.93925 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 0 - - "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400107MJ male research_filter CYTX87896 11 54701632 54757916 56285 Gain 4 0.929238 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400967PK male research_filter NJBJ54022 11 54701632 54757916 56285 Gain 4 0.934169 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401066MM female research_filter DOUQ66820 11 54701632 54757916 56285 Gain 4 0.933559 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401303FM male research_filter TPDE39419 11 54701632 54757916 56285 Gain 4 0.926908 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401369GR male research_filter TCTA60809 11 54701632 54757916 56285 Gain 4 0.928282 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401965TG female research_filter SPYW97422 11 54701632 54757916 56285 Gain 4 0.941934 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400899NK female research_filter BRIY29802 11 54701632 54757916 56285 Gain 4 0.932927 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401717LP female research_filter SMGW17663 11 54701632 54757916 56285 Gain 4 0.942939 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400362TV female research_filter IDVO19613 11 54701632 54757916 56285 Gain 4 0.91181 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401434VN female research_filter FRXS36515 11 54701632 54757916 56285 Gain 4 0.90887 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400769SL female research_filter OZXZ40778 11 54701632 54757916 56285 Gain 4 0.92439 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 400123WN male research_filter KKFR54086 11 54701632 54757916 56285 Gain 4 0.935092 8 8040 chas 100 Gain 0 - 0 - Gain-- 3 NA NA NA "ChAS,IPN" 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_yes algo_yes NA 401443JK male research_filter GVUJ86973 11 54701632 54757916 56285 Loss 1 0.905477 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400914ER male - ZMNN35179 11 54701632 54757916 56285 Gain 4 0.921835 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400430KV male - GNMX63810 11 54701632 54757916 56285 Gain 4 0.92974 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401067BD male - NWRU68440 11 54701632 54757916 56285 Gain 4 0.934622 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401064FR male - QVOH35939 11 54701632 54757916 56285 Gain 4 0.899335 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400291VJ male - WGSV83254 11 54701632 54757916 56285 Gain 4 0.927115 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401733CG male - RAQB29487 11 54701632 54757916 56285 Gain 4 0.939371 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401746WW male - HAAE15834 11 54701632 54757916 56285 Gain 4 0.944454 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401899MB male - RQNQ20012 11 54701632 54757916 56285 Gain 4 0.932982 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401326LI female - EZOV24426 11 54701632 54757916 56285 Gain 4 0.893565 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 400454RE male - IENJ56420 11 54701632 54757916 56285 Gain 4 0.901929 8 8040 chas 0 - 0 - 0 - --- 3 NA NA NA ChAS 11q11 - - 0 - 0 - - - "56285(4|Conrad(2009),McCarroll(2008),Ju(2010))" - - 3 - 0 "56285(25|Conrad(2009),McCarroll(2008),Durbin(2010),Ju(2010))" FALSE TRUE ipn_no algo_no NA 401538NS female - TCSA61368 19 23723647 23779930 56284 Loss 1 0.924818 48 1197 chas 100 Loss 100 Loss 100 Loss LossLossLoss 42 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 19p12 - - 0 - 0 - - - "56284(2|Pinto(2007),Redon(2006))" - - 42 - 0 "56284(16|Teague(2010),Redon(2006),Itsara(2009),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" BCMG96058 5 180374523 180430789 56267 Gain 3 0.887271 39 1480 chas 89.91 Gain 92.33 Gain 0 - GainGain- 20 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56267(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 20 - 0 "56267(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400013TA male research_filter KQIO31508 5 180374523 180430789 56267 Gain 3 0.901974 39 1480 chas 98.62 Gain 87.94 Gain 0 - GainGain- 20 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56267(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 20 - 0 "56267(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400507VD male research_filter YSDD20509 5 180374523 180430789 56267 Gain 3 0.897259 39 1480 chas 98.62 Gain 76.1 Gain 0 - GainGain- 20 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56267(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 20 - 0 "56267(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400333CC female research_filter BSJX70163 5 180374523 180430789 56267 Gain 3 0.914641 39 1480 chas 98.62 Gain 76.39 Gain 0 - GainGain- 20 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "56267(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 20 - 0 "56267(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401406KF male research_filter TCTA60809 21 24161829 24218094 56266 Loss 1 0.898365 44 1308 chas 96.01 Loss 92.56 Loss 98.02 Loss LossLossLoss 38 NA NA NA "ChAS,IPN,NXS,PTK" 21q21.2 - - 0 - 0 - - - "43812(10|Wang(2007),Matsuzaki(2009),Conrad(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Shaikh(2009))" - - 38 - 0 "56266(71|Conrad(2009),Wong(2007),Wang(2007),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401965TG female "research_filter, clinical_filter" PRED73338 7 64595091 64651336 56246 Loss 1 0.884242 15 4017 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 7q11.21 - INTS4L1 1 INTS4L1 1 - - 41821(1|Kidd(2008)) "56246(14|Conrad(2009),Pinto(2007),Perry(2008),Ju(2010),de Smith(2007),McCarroll(2008),Simon-Sanchez(2007),Zogopoulos(2007))" - 100 6 - 0 "56246(71|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),Ju(2010),Durbin(2010),De(Smith_2007),Locke(2006),Pinto(2007),Simon-Sanchez(2007),Campbell(2011),Pinto(2011),Kidd(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401183HP female - RPZL61223 6 29841021 29897260 56240 Loss 1 0.886935 22 2678 chas 79.21 Loss 0 - 0 - Loss-- 28 NA NA NA "ChAS,IPN" 6p22.1 - "HLA-H,HCG4B" 2 "HLA-H,HCG4B" 2 - - - "56240(49|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 38 28 - 0 "56240(319|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes NA 401673DM male research_filter TFVC48426 9 11627763 11683979 56217 Loss 1 0.915328 28 2082 chas 28.13 Loss 93.06 Loss 0 - LossLoss- 39 89.01 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 9p23 - - 0 - 0 - - - "56217(13|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Conrad(2009),Pinto(2007),Simon-Sanchez(2007),Redon(2006),Shaikh(2009))" 793(1|Matsuzaki(2009)) - 39 - 0 "56217(57|Conrad(2009),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Pinto(2011),Redon(2006),Teague(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400501SJ male "research_filter, clinical_filter" VHGW31501 7 38295932 38352147 56216 Loss 1 0.868206 74 770 chas 0 - 32.64 Loss 0 - -Loss- 84 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "56216(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 40 84 - 0 "56216(51|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401819BS female "research_filter, clinical_filter" ICCB48361 7 38295932 38352147 56216 Gain 3 0.89429 74 770 chas 0 - 72.82 Gain 72.83 Gain #NAME? 84 NA NA NA "ChAS,NXS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "56216(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 40 84 - 0 "56216(51|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401258PC female "research_filter, clinical_filter" HDQN23240 1 207692132 207748346 56215 Gain 3 0.891296 41 1405 chas 0 - 0 - 0 - --- 11 0 - - ChAS 1q32.2 - CR1 1 CR1 1 CR1 - - "52614(21|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005),Park(2010))" - 100 11 - 0 "56215(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Alkan(2009),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Tuzun(2005),Park(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400136DM female - GYNG28087 3 46793364 46849576 56213 Loss 1 0.907075 47 1222 chas 84.96 Loss 84.75 Loss 92.47 Loss LossLossLoss 42 84.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" OPOQ31165 3 46793364 46849576 56213 Loss 1 0.908224 47 1222 chas 84.96 Loss 92.06 Loss 92.42 Loss LossLossLoss 42 84.46 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400795CL female "research_filter, clinical_filter" KRGM31190 3 46793364 46849576 56213 Loss 1 0.914847 47 1222 chas 84.96 Loss 84.75 Loss 92.47 Loss LossLossLoss 42 84.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" CBEA57280 3 46793364 46849576 56213 Loss 1 0.915253 47 1222 chas 84.96 Loss 92.47 Loss 92.47 Loss LossLossLoss 42 84.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" WPKS46597 3 46793364 46849576 56213 Loss 1 0.902106 47 1222 chas 84.96 Loss 84.75 Loss 92.47 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400732MA female "research_filter, clinical_filter" OPKR54750 3 46793364 46849576 56213 Loss 1 0.895957 47 1222 chas 84.96 Loss 92.47 Loss 92.47 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401822TL female "research_filter, clinical_filter" CVYW15790 3 46793364 46849576 56213 Loss 1 0.903279 47 1222 chas 84.96 Loss 92.43 Loss 92.42 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" XHZD61935 3 46793364 46849576 56213 Loss 1 0.9097 47 1222 chas 84.96 Loss 91.35 Loss 92.06 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" DUXB26784 3 46793364 46849576 56213 Loss 1 0.915001 47 1222 chas 84.96 Loss 92.47 Loss 92.47 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "56213(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 42 - 0 "56213(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401519SA female "research_filter, clinical_filter" WSSG80726 20 23648255 23704411 56157 Gain 3 0.89127 68 838 chas 94.55 Gain 96.8 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 20p11.21 - CST4 1 CST4 1 - - - "3405(3|McKernan(2009),Matsuzaki(2009),Bentley(2008))" - 100 40 - 0 "56157(19|Schuster(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" JABM59002 7 110863880 110920005 56126 Loss 1 0.909365 48 1194 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 7q31.1 - IMMP2L 1 - 0 - - - "56126(10|Wang(2007),Jakobsson(2008),Conrad(2005),Conrad(2009),McKernan(2009),Pinto(2007),Shaikh(2009),McCarroll(2005),Simon-Sanchez(2007))" - - 54 - 0 "56126(20|Conrad(2009),Jakobsson(2008),Wang(2007),Itsara(2009),McKernan(2009),Conrad(2006),Durbin(2010),Simon-Sanchez(2007),Perry(2008b),Redon(2006),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400328LM female "research_filter, clinical_filter" VAON88685 20 14767367 14823472 56106 Loss 1 0.908406 40 1438 chas 74.48 Loss 85.87 Loss 85.87 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "56106(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 70 - 0 "56106(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" AIKT30285 1 1397490 1453590 56101 Loss 1 0.901071 32 1809 chas 41.99 Loss 100 Loss 0 - LossLoss- 5 0 - - "ChAS,IPN,NXS" 1p36.33 - "ATAD3C,ATAD3B,ATAD3A" 3 "ATAD3C,ATAD3B,ATAD3A" 3 - "56101#1%""1p36 microdeletion syndrome"":5408761" - "56101(4|Park(2010),Conrad(2009),Perry(2008))" 1(1|Levy(2007)) 92 4 - 0 "56101(27|Conrad(2009),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400618GC male "research_filter, clinical_filter" WHOU87472 1 1397490 1453590 56101 Loss 1 0.88003 32 1809 chas 56.46 Loss 56.4 Loss 0 - LossLoss- 5 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "ATAD3C,ATAD3B,ATAD3A" 3 "ATAD3C,ATAD3B,ATAD3A" 3 - "56101#1%""1p36 microdeletion syndrome"":5408761" - "56101(4|Park(2010),Conrad(2009),Perry(2008))" 1(1|Levy(2007)) 92 4 - 0 "56101(27|Conrad(2009),Redon(2006),Perry(2008),Schuster(2010),Durbin(2010),Park(2010),Pinto(2011))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" RFXX95002 11 55386217 55442305 56089 Gain 3 0.880118 65 876 chas 0 - 100 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "55045(2|Kidd(2008),Korbel(2007))" "56089(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "56089(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401773AM male "research_filter, clinical_filter" MWRB65708 X 103180247 103236332 56086 Gain 3 0.903105 45 1274 chas 87.96 Gain 0 - 0 - Gain-- 32 98.12 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "MIR1256,H2BFXP,TMSB15B" 3 "H2BFXP,TMSB15B" 2 - - "31693(4|Pang(2010),Kidd(2008),Tuzun(2005))" "48266(8|Conrad(2009),Matsuzaki(2009),Shaikh(2009))" - 60 32 - 0 "56086(8|Conrad(2009),Redon(2006),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400267GD female research_filter HQWW55061 9 20589996 20646009 56014 Gain 3 0.916261 92 615 chas 81.45 Gain 85.02 Gain 99.93 Gain GainGainGain 52 99.84 Gain "GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.3 - MLLT3 1 MLLT3 1 - - - "56014(2|Pang(2010),Shaikh(2009))" - - 52 - 0 "35207(6|Pinto(2011),Pang(2010),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400523GB female "research_filter, clinical_filter" LLRB50237 3 711677 767659 55983 Loss 1 0.926141 52 1097 chas 92.7 Loss 93.61 Loss 93.61 Loss LossLossLoss 58 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.3 - - 0 - 0 - - - 1460(1|McKernan(2009)) - - 58 - 0 "55983(11|Wong(2007),Redon(2006),Itsara(2009),McKernan(2009),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" FIIC23299 2 101212019 101267980 55962 Gain 3 0.897886 40 1434 chas 75.36 Gain 100 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 2q11.2 - - 0 - 0 - - - - - - 40 - 0 "55962(3|Wong(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400843FL female research_filter GFOF72186 11 55374019 55429946 55928 Loss 1 0.869487 62 916 chas 99.98 Loss 0 - 0 - Loss-- 43 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 55928(1|Korbel(2007)) "55928(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 43 - 0 "55928(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401942MP male "research_filter, clinical_filter" TTBC76525 11 55386384 55442305 55922 Loss 1 0.861746 64 887 chas 100 Loss 0 - 0 - Loss-- 29 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400371GA female "research_filter, clinical_filter" ZVON68408 11 55386384 55442305 55922 Loss 1 0.865754 64 887 chas 100 Loss 0 - 0 - Loss-- 29 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" PGEB85888 11 55386384 55442305 55922 Loss 1 0.877865 64 887 chas 100 Loss 0 - 0 - Loss-- 29 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401582GG female "research_filter, clinical_filter" WCXF39029 11 55386384 55442305 55922 Gain 3 0.88378 64 887 chas 0 - 100 Gain 0 - -Gain- 29 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400788PV male "research_filter, clinical_filter" UYAI76550 11 55386384 55442305 55922 Gain 3 0.879095 64 887 chas 0 - 64.22 Gain 0 - -Gain- 29 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400792RE female "research_filter, clinical_filter" RYUR49963 11 55386384 55442305 55922 Gain 3 0.887039 64 887 chas 0 - 100 Gain 0 - -Gain- 29 100 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400177SJ male "research_filter, clinical_filter" ZVZK64221 11 55386384 55442305 55922 Gain 3 0.880632 64 887 chas 0 - 64.18 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401911FL male "research_filter, clinical_filter" CYTX87896 11 55386384 55442305 55922 Gain 3 0.874831 64 887 chas 0 - 99.99 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400967PK male "research_filter, clinical_filter" YQRK14476 11 55386384 55442305 55922 Gain 3 0.878838 64 887 chas 0 - 100 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401154BR male "research_filter, clinical_filter" HEJH85210 11 55386384 55442305 55922 Gain 3 0.884796 64 887 chas 0 - 99.89 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401884WJ male "research_filter, clinical_filter" ZMNN35179 11 55386384 55442305 55922 Gain 3 0.878594 64 887 chas 0 - 100 Gain 0 - -Gain- 29 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54878(2|Kidd(2008),Korbel(2007))" "55922(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 29 - 0 "55922(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400430KV male "research_filter, clinical_filter" DZXX36994 X 28253451 28309359 55909 Gain 3 0.896074 32 1803 chas 0 - 0 - 0 - --- 40 NA NA NA ChAS Xp21.3 - - 0 - 0 - - - 55909(1|Redon(2006)) - - 40 - 0 "55909(4|Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401005BL female - IOGU88526 5 180374898 180430789 55892 Gain 3 0.916502 38 1510 chas 99.28 Gain 75.05 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401623SN male research_filter VVRJ19010 5 180374898 180430789 55892 Gain 3 0.912849 38 1510 chas 99.28 Gain 99.65 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401535RJ male research_filter GVAB34760 5 180374898 180430789 55892 Gain 3 0.915679 38 1510 chas 99.28 Gain 88.54 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400453LN male research_filter XNCW62958 5 180374898 180430789 55892 Gain 3 0.913506 38 1510 chas 99.28 Gain 88.89 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401490TL male research_filter DHFF12670 5 180374898 180430789 55892 Gain 3 0.904982 38 1510 chas 100 Gain 81.84 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401252AE male research_filter QRSF74396 5 180374898 180430789 55892 Gain 3 0.900593 38 1510 chas 99.28 Gain 75.71 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401500OM male research_filter NQBM70678 5 180374898 180430789 55892 Gain 3 0.900848 38 1510 chas 0 - 85.06 Gain 0 - -Gain- 19 0 - - "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400084DM female research_filter LLZZ76842 5 180374898 180430789 55892 Gain 3 0.908469 38 1510 chas 0 - 85.06 Gain 0 - -Gain- 19 0 - - "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400354TJ female research_filter WVAB12930 5 180374898 180430789 55892 Gain 3 0.907794 38 1510 chas 0 - 88.54 Gain 0 - -Gain- 19 0 - - "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400655WB female research_filter PBCS27067 5 180374898 180430789 55892 Gain 3 0.895344 38 1510 chas 0 - 88.54 Gain 0 - -Gain- 19 NA NA NA "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55892(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55892(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400422PN male research_filter KZTP77176 1 243948274 244004149 55876 Gain 3 0.904524 78 725 chas 41.59 Gain 94.73 Gain 0 - GainGain- 46 89.48 Gain "BS,IP6" "ChAS,IPN,NXS" 1q44 - AKT3 1 - 0 - - - 20312(2|Kidd(2008)) - - 46 - 0 "55876(5|Teague(2010),Wong(2007),Shaikh(2009),Kidd(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401491BB male "research_filter, clinical_filter" CZJD30358 19 55252034 55307868 55835 Loss 1 0.905394 9 6979 chas 0 - 0 - 0 - --- 11 0 - - ChAS 19q13.42 - "KIR2DL3,KIR2DL1" 2 "KIR2DL3,KIR2DL1" 2 - - - "55835(41|Wang(2007),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Itsara(2009),Pinto(2007),Simon-Sanchez(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" - 100 11 - 0 "55835(111|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Itsara(2009),Wang(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400063BR female - ZQFY18932 2 142683308 142739121 55814 Loss 1 0.919222 97 581 chas 97.31 Loss 98.59 Loss 98.6 Loss LossLossLoss 36 NA NA NA "ChAS,IPN,NXS,PTK" 2q22.2 - LRP1B 1 - 0 - - - - - - 36 - 0 143(1|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 400341GL female "research_filter, clinical_filter" AJUD27157 6 78979398 79035172 55775 Loss 1 0.880285 18 3280 chas 100 Loss 0 - 0 - Loss-- 93 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55775(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 92 - 0 "55775(816|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401075MN female research_filter YCEN33630 6 78979398 79035161 55764 Loss 1 0.898861 17 3485 chas 100 Loss 100 Loss 0 - LossLoss- 92 100 Loss "BS,IP6" "ChAS,IPN,NXS" 6q14.1 - - 0 - 0 - - - "55764(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 92 - 0 "55764(816|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400294HD male research_filter VVRJ19010 16 7039807 7095570 55764 Loss 1 0.922634 172 326 chas 89.67 Loss 94.71 Loss 94.72 Loss LossLossLoss 71 NA NA NA "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - "45463(11|Wang(2007),Redon(2006),Perry(2008),McKernan(2009),Pinto(2007),Park(2010),Shaikh(2009),Zogopoulos(2007))" 156(1|Shaikh(2009)) - 71 - 0 "55764(27|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Pinto(2011),Pinto(2007),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" YKER13969 10 18095239 18150996 55758 Gain 4 0.918368 16 3717 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 10p12.33 - "MRC1,MIR511-1,MIR511-2" 3 "MRC1,MIR511-1,MIR511-2" 3 - - - "5342(2|Conrad(2009),Matsuzaki(2009))" - 100 6 - 0 "55758(8|Teague(2010),Durbin(2010),Conrad(2009))" FALSE TRUE ipn_no algo_no NA 401372RR male - RAZI40834 9 22509658 22565408 55751 Loss 1 0.933722 36 1592 chas 100 Loss 94.14 Loss 100 Loss LossLossLoss 42 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.3 - - 0 - 0 - - - "12422(2|Kidd(2008),Mills(2006))" - - 42 - 0 "54464(9|Teague(2010),Itsara(2009),Durbin(2010),Kidd(2008),Pinto(2011),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" IAQN76409 11 55374019 55429746 55728 Gain 3 0.883737 61 928 chas 0 - 53.18 Gain 0 - -Gain- 43 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 55728(1|Korbel(2007)) "55728(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "55728(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401820SD female "research_filter, clinical_filter" CWFZ39975 11 55374019 55429745 55727 Loss 1 0.871243 60 944 chas 99.98 Loss 0 - 0 - Loss-- 42 99.98 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 55727(1|Korbel(2007)) "55727(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 42 - 0 "55727(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400598DA female "research_filter, clinical_filter" XUQQ42504 5 113577 169301 55725 Gain 3 0.885486 134 418 chas 24.03 Gain 50.51 Gain 100 Gain GainGainGain 38 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.33 - PLEKHG4B 1 PLEKHG4B 1 - "55725#1%""Cri du Chat Syndrome (5p deletion)"":11723854" - "55725(12|Conrad(2009),Perry(2008),Matsuzaki(2009),Ju(2010),McKernan(2009),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" - - 38 - 0 "55725(29|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401702GB male "research_filter, clinical_filter" STES59258 5 59717731 59773415 55685 Gain 3 0.8909 84 670 chas 99.38 Gain 99.71 Gain 0 - GainGain- 35 NA NA NA "ChAS,IPN,NXS" 5q12.1 - PDE4D 1 - 0 PDE4D - - "48842(3|Itsara(2009),Matsuzaki(2009),Shaikh(2009))" - 3 35 - 0 "53993(6|Itsara(2009),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" HOIC14625 1 176220702 176276374 55673 Gain 3 0.897537 37 1546 chas 75.93 Gain 76.76 Gain 0 - GainGain- 22 0 - - "ChAS,IPN,NXS" 1q25.2 - - 0 - 0 - - - 3042(1|Mills(2006)) - - 22 - 0 "55673(10|Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400619MP male research_filter EMKM20452 21 22567814 22623457 55644 Loss 1 0.918898 68 830 chas 92.37 Loss 96.09 Loss 96.1 Loss LossLossLoss 42 92.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 21q21.1 - NCAM2 1 - 0 - - - 8090(1|Sebat(2004)) - - 42 - 0 "55644(3|Pinto(2011),Sebat(2004),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" AQKH94698 3 46793072 46848691 55620 Loss 1 0.891416 44 1293 chas 84.28 Loss 91.87 Loss 91.87 Loss LossLossLoss 40 99.47 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p21.31 - - 0 - 0 - - - "55620(19|Conrad(2009),Matsuzaki(2009),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Kidd(2008),McCarroll(2008),Cooper(2008),McCarroll(2005))" - - 40 - 0 "55620(105|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Kidd(2010b),Campbell(2011),Durbin(2010),McCarroll(2006),Kidd(2008),Wilson(2010),Altshuler(2010),Cooper(2008),Perry(2008b),Pinto(2011),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400955BE male "research_filter, clinical_filter" TFVC48426 2 114325207 114380809 55603 Loss 1 0.894126 14 4277 chas 0 - 0 - 0 - --- 8 0 - - ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "51359(5|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 7 - 0 "55603(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400501SJ male - WHSN55625 2 114325207 114380809 55603 Loss 1 0.897243 14 4277 chas 0 - 0 - 0 - --- 8 0 - - ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "51359(5|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 7 - 0 "55603(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 401354KM male - AZMC27188 2 114325207 114380809 55603 Loss 1 0.886162 14 4277 chas 0 - 0 - 0 - --- 8 0 - - ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "51359(5|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 7 - 0 "55603(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no affy6_no 400209BS_1 female - MWKR26526 2 114325207 114380809 55603 Loss 1 0.888256 14 4277 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 2q13 - "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 "FAM138B,RPL23AP7,DDX11L2,WASH2P" 4 - - - "51359(5|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010))" - 99 7 - 0 "55603(25|Ju(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Wilson(2010),Pinto(2011),Teague(2010))" FALSE TRUE ipn_no algo_no NA 400225CJ male - TBRP43796 1 1616990 1672591 55602 Loss 1 0.909759 40 1425 chas 91.37 Loss 97.71 Loss 0 - LossLoss- 21 80.35 Loss BS "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401894PD male "research_filter, clinical_filter" KWJN47187 1 1616990 1672591 55602 Loss 1 0.890356 40 1425 chas 91.37 Loss 0 - 0 - Loss-- 21 80.37 Loss "BS,GTC,IP6" "ChAS,IPN" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" GKVG35266 1 1616990 1672591 55602 Loss 1 0.89739 40 1425 chas 91.37 Loss 88.82 Loss 0 - LossLoss- 21 80.35 Loss "BS,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" TOAX48712 1 1616990 1672591 55602 Loss 1 0.895167 40 1425 chas 91.37 Loss 76.4 Loss 0 - LossLoss- 21 80.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400758KP female "research_filter, clinical_filter" NZSQ74406 1 1616990 1672591 55602 Loss 1 0.89153 40 1425 chas 63.7 Loss 76.4 Loss 93.39 Loss LossLossLoss 21 80.35 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400191MP_1 male "research_filter, clinical_filter" IRJE88693 1 1616990 1672591 55602 Loss 1 0.90046 40 1425 chas 91.37 Loss 93.4 Loss 93.39 Loss LossLossLoss 21 80.35 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" USUN51593 1 1616990 1672591 55602 Loss 1 0.887165 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 80.35 Loss "BS,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400199SA_1 male "research_filter, clinical_filter" PTWY73614 1 1616990 1672591 55602 Loss 1 0.885087 40 1425 chas 91.37 Loss 93.12 Loss 0 - LossLoss- 21 80.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401540GM male "research_filter, clinical_filter" PQCI84759 1 1616990 1672591 55602 Loss 1 0.891871 40 1425 chas 91.37 Loss 93.12 Loss 0 - LossLoss- 21 80.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" CBEA57280 1 1616990 1672591 55602 Loss 1 0.893558 40 1425 chas 91.37 Loss 88.82 Loss 0 - LossLoss- 21 80.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400231LP female "research_filter, clinical_filter" MAKG95944 1 1616990 1672591 55602 Loss 1 0.903285 40 1425 chas 91.37 Loss 95.42 Loss 0 - LossLoss- 21 80.35 Loss BS "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400041LJ male "research_filter, clinical_filter" YCEN33630 1 1616990 1672591 55602 Loss 1 0.903104 40 1425 chas 91.37 Loss 97.71 Loss 0 - LossLoss- 21 80.35 Loss BS "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400294HD male "research_filter, clinical_filter" MUIH56067 1 1616990 1672591 55602 Loss 1 0.90568 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400930MK female "research_filter, clinical_filter" LSSN67820 1 1616990 1672591 55602 Loss 1 0.891688 40 1425 chas 91.37 Loss 93.12 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" GHAL32977 1 1616990 1672591 55602 Loss 1 0.887427 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" DQOA73385 1 1616990 1672591 55602 Loss 1 0.904739 40 1425 chas 91.37 Loss 85.86 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401592NR male "research_filter, clinical_filter" GNMX63810 1 1616990 1672591 55602 Loss 1 0.904541 40 1425 chas 91.37 Loss 97.71 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401067BD male "research_filter, clinical_filter" RCXD61683 1 1616990 1672591 55602 Loss 1 0.894879 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401465TB male "research_filter, clinical_filter" TDDJ68763 1 1616990 1672591 55602 Loss 1 0.889415 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401250WD female "research_filter, clinical_filter" RFXX95002 1 1616990 1672591 55602 Loss 1 0.893597 40 1425 chas 91.37 Loss 93.4 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55602#1%""1p36 microdeletion syndrome"":5408761" - "55602(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55602(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401773AM male "research_filter, clinical_filter" DBFY56089 1 1616990 1672590 55601 Loss 1 0.913257 39 1463 chas 91.37 Loss 88.82 Loss 0 - LossLoss- 20 80.35 Loss "BS,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "55601#1%""1p36 microdeletion syndrome"":5408761" - "55601(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "55601(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400458LS female "research_filter, clinical_filter" DQHB62647 5 46042945 46098523 55579 Loss 1 0.898867 16 3705 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS 5p12 - - 0 - 0 - - - "49856(2|Itsara(2009),McKernan(2009))" - - 7 - 0 "55579(14|Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401732HW male - WWCZ24238 11 55386774 55442305 55532 Loss 1 0.860422 62 910 chas 100 Loss 0 - 0 - Loss-- 28 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "54488(2|Kidd(2008),Korbel(2007))" "55532(60|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 28 - 0 "55532(720|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401736BF male "research_filter, clinical_filter" RPZL61223 11 49710692 49766196 55505 Loss 1 0.875182 60 940 chas 89.97 Loss 0 - 0 - Loss-- 36 NA NA NA "ChAS,IPN" 11p11.12 - LOC440040 1 - 0 - - "25782(2|Kidd(2008),Tuzun(2005))" "55505(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 36 - 0 "55505(89|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" SBJN54268 5 180375290 180430789 55500 Gain 3 0.905815 37 1541 chas 99.98 Gain 85.66 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400343BD female research_filter UHFE12130 5 180375290 180430789 55500 Gain 3 0.900654 37 1541 chas 99.98 Gain 85.66 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401198TI female research_filter RCXD61683 5 180375290 180430789 55500 Gain 3 0.901838 37 1541 chas 99.98 Gain 75.23 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401465TB male research_filter BKPJ24282 5 180375290 180430789 55500 Gain 3 0.917061 37 1541 chas 99.98 Gain 88.81 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401458RT male research_filter QMDZ51984 5 180375290 180430789 55500 Gain 3 0.909524 37 1541 chas 99.98 Gain 67.56 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401979TB male research_filter JAVP94180 5 180375290 180430789 55500 Gain 3 0.919194 37 1541 chas 99.98 Gain 57.31 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401932GN female research_filter YKER13969 5 180375290 180430789 55500 Gain 4 0.926978 37 1541 chas 99.98 Gain 76.3 Gain 0 - GainGain- 19 NA NA NA "ChAS,IPN,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401372RR male research_filter HEAQ37888 5 180375290 180430789 55500 Gain 3 0.895082 37 1541 chas 0 - 88.81 Gain 0 - -Gain- 19 70.66 Gain GTC "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400956AM male research_filter ORNW53006 5 180375290 180430789 55500 Gain 3 0.90395 37 1541 chas 0 - 73.12 Gain 0 - -Gain- 19 70.96 Gain "GTC,IP6" "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400494ML female research_filter QYVK49015 5 180375290 180430789 55500 Gain 3 0.891789 37 1541 chas 0 - 85.66 Gain 0 - -Gain- 19 NA NA NA "ChAS,NXS" 5q35.3 - "BTNL8,BTNL3" 2 "BTNL8,BTNL3" 2 - - - "55500(22|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 12 19 - 0 "55500(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401494PD male research_filter XPRZ52054 9 105259595 105315085 55491 Loss 1 0.903696 28 2055 chas 92.45 Loss 99.16 Loss 0 - LossLoss- 35 98.37 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 9q31.1 - - 0 - 0 - - - - - - 35 - 0 1404(3|Durbin(2010)) TRUE TRUE ipn_yes algo_yes affy6_yes 400611GG male "research_filter, clinical_filter" CAYM40684 13 64321539 64377028 55490 Gain 3 0.891306 42 1353 chas 56.31 Gain 100 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 13q21.31 - - 0 - 0 - - 9475(1|Kidd(2008)) "55490(7|McCarroll(2008),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 80 32 - 0 "55490(7|Redon(2006),Perry(2008),Kidd(2010b),Kidd(2008),McCarroll(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401986LC female research_filter JQGN11749 18 49087845 49143298 55454 Gain 3 0.907859 36 1584 chas 88.17 Gain 93.95 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 18q21.2 - LOC100287225 1 LOC100287225 1 - - - - - 3 40 - 0 "55454(4|Wong(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400534ME male research_filter ICDL89338 6 78972075 79027502 55428 Loss 1 0.883068 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400977SC female research_filter PSUS84601 6 78972075 79027502 55428 Loss 1 0.876342 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401021SC female research_filter TZAD89276 6 78972075 79027502 55428 Loss 1 0.880877 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401185LE female research_filter HQWW55061 6 78972075 79027502 55428 Loss 1 0.890916 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400523GB female research_filter TOAX48712 6 78972075 79027502 55428 Loss 1 0.88085 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400758KP female research_filter FPEA56091 6 78972075 79027502 55428 Loss 1 0.878807 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 100 Loss "BS,GTC,IP6" "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400075MR male research_filter ZVON68408 6 78972075 79027502 55428 Loss 1 0.886857 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400688FL female research_filter LRBG51365 6 78972075 79027502 55428 Loss 1 0.879909 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400886MP female research_filter TMXA54308 6 78972075 79027502 55428 Loss 1 0.886715 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400478WE female research_filter VZCC67569 6 78972075 79027502 55428 Loss 0 0.974527 20 2917 chas 100 Loss 100 Loss 73.43 Loss LossLossLoss 100 NA NA NA "ChAS,IPN,NXS,PTK" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400906BR male research_filter MQVK42355 6 78972075 79027502 55428 Loss 1 0.878073 20 2917 chas 100 Loss 0 - 0 - Loss-- 100 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401203MP female research_filter YBMF74034 6 78972075 79027502 55428 Loss 1 0.890543 20 2917 chas 0 - 0 - 0 - --- 100 100 Loss "BS,GTC,IP6" ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 401806DL male - NZSQ74406 6 78972075 79027502 55428 Loss 1 0.900289 20 2917 chas 0 - 0 - 0 - --- 100 100 Loss "BS,GTC,IP6" ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400191MP_1 male - NSZE63198 6 78972075 79027502 55428 Loss 1 0.891153 20 2917 chas 0 - 0 - 0 - --- 100 100 Loss "BS,IP6" ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no affy6_yes 400724CD male - MAAD53838 6 78972075 79027502 55428 Loss 1 0.883306 20 2917 chas 0 - 0 - 0 - --- 100 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401517PR male - RDBP35321 6 78972075 79027502 55428 Loss 1 0.884618 20 2917 chas 0 - 0 - 0 - --- 100 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 400773GS male - IJCH39724 6 78972075 79027502 55428 Loss 1 0.888876 20 2917 chas 0 - 0 - 0 - --- 100 NA NA NA ChAS 6q14.1 - - 0 - 0 - - - "55428(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 100 - 0 "55428(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_no NA 401571SD male - TEQK36134 11 4549804 4605195 55392 Loss 1 0.895942 104 537 chas 81.81 Loss 89.3 Loss 89.29 Loss LossLossLoss 83 NA NA NA "ChAS,IPN,NXS,PTK" 11p15.4 - "C11orf40,OR52M1" 2 "C11orf40,OR52M1" 2 - - - "33936(7|Redon(2006),Perry(2008),Pinto(2007),Park(2010),Shaikh(2009),McCarroll(2008))" 912(1|Conrad(2009)) - 83 - 0 "55392(22|Conrad(2009),Wong(2007),Pinto(2007),Perry(2008),Durbin(2010),McCarroll(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400908PJ female "research_filter, clinical_filter" QEPL68818 8 47398662 47454050 55389 Loss 1 0.914032 22 2637 chas 0 - 87.47 Loss 0 - -Loss- 20 NA NA NA "ChAS,NXS" 8q11.1 - - 0 - 0 - - - "55389(8|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" 853(1|Conrad(2009)) - 20 - 0 "55389(33|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Simon-Sanchez(2007))" FALSE TRUE ipn_no algo_yes NA 402028BD male research_filter OBAS32636 5 18583286 18638659 55374 Loss 1 0.932973 30 1909 chas 100 Loss 92.31 Loss 100 Loss LossLossLoss 29 89.76 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5p14.3 - - 0 - 0 - - - "55374(3|Pang(2010),Shaikh(2009))" - 42 29 - 0 "55374(5|Pinto(2011),Pang(2010),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400249BC female "research_filter, clinical_filter" YQRA83123 6 78972131 79027502 55372 Loss 1 0.881221 19 3076 chas 100 Loss 0 - 0 - Loss-- 99 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "55372(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 99 - 0 "55372(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400416KA male research_filter DBZL89045 X 103257553 103312921 55369 Gain 3 0.911988 72 779 chas 83.4 Gain 0 - 0 - Gain-- 61 85.55 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "55369(6|Pang(2010),Kidd(2008),Tuzun(2005))" "55369(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 16 61 - 0 "55369(20|Teague(2010),Redon(2006),Conrad(2009),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400032RC female "research_filter, clinical_filter" TABQ91013 5 59717731 59773067 55337 Gain 3 0.905397 83 674 chas 68.68 Gain 100 Gain 100 Gain GainGainGain 35 NA NA NA "ChAS,IPN,NXS,PTK" 5q12.1 - PDE4D 1 - 0 PDE4D - - "48842(3|Itsara(2009),Matsuzaki(2009),Shaikh(2009))" - 3 35 - 0 "53993(6|Itsara(2009),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" UBHC61833 10 47080360 47135671 55312 Gain 3 0.872386 80 700 chas 100 Gain 17.53 Gain 0 - GainGain- 58 0 - - "ChAS,IPN,NXS" 10q11.22 - "LOC728643,LOC643650,PPYR1" 3 "LOC728643,LOC643650,PPYR1" 3 - - - "55312(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" 2 58 - 0 "55312(190|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_yes algo_yes affy6_no 400768MN female "research_filter, clinical_filter" OFVS61400 19 55307868 55363174 55307 Gain 3 0.896873 28 2048 chas 0 - 97.06 Gain 0 - -Gain- 31 73.81 - BS "ChAS,NXS" 19q13.42 - "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 "KIR3DL1,KIR2DS4,KIR3DL2,KIR2DL4" 4 KIR3DL1 - - "55307(46|Wang(2007),Ahn(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" 192(1|Mills(2006)) 100 31 - 0 "55307(97|Redon(2006),Wang(2007),Perry(2008b),Locke(2006),Pinto(2011),Shaikh(2009),Conrad(2006),McCarroll(2008),De(Smith_2007),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),Alkan(2009),McKernan(2009),Campbell(2011),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes affy6_no 401143LK female research_filter EHXC97365 X 134748907 134804212 55306 Gain 2 0.924935 192 289 chas 100 Gain 0 - 0 - Gain-- 37 NA NA NA "ChAS,IPN" Xq26.3 - - 0 - 0 - - 13697(1|Kidd(2008)) "55306(9|Conrad(2009),Redon(2006),Shaikh(2009),Perry(2008),Matsuzaki(2009))" - 28 37 - 0 "55306(17|Conrad(2009),Redon(2006),Perry(2008),Levy(2007),Durbin(2010),Pang(2010),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401415CB male "research_filter, clinical_filter" UJRA83281 8 47398662 47453902 55241 Loss 1 0.886803 20 2907 chas 0 - 0 - 0 - --- 20 NA NA NA ChAS 8q11.1 - - 0 - 0 - - - "55241(8|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" 853(1|Conrad(2009)) - 20 - 0 "55241(33|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Simon-Sanchez(2007))" FALSE TRUE ipn_no algo_no NA 401361GG male - XROV61149 5 12267469 12322663 55195 Loss 1 0.92559 64 876 chas 94.61 Loss 97.5 Loss 97.5 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 5p15.2 - - 0 - 0 - - - - 675(1|Park(2010)) - 34 - 0 "43249(5|Park(2010),Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401480PG male "research_filter, clinical_filter" LHPN45961 13 115023828 115079011 55184 Gain 3 0.883897 112 497 chas 99.95 Gain 44.66 Gain 0 - GainGain- 28 NA NA NA "ChAS,IPN,NXS" 13q34 - "UPF3A,CDC16" 2 "UPF3A,CDC16" 2 - - - "55184(3|Park(2010),Conrad(2009),Kim(2009))" "4(3|Pang(2010),Levy(2007),Mills(2006))" 7 28 - 0 "55184(11|Conrad(2009),Itsara(2009),Durbin(2010),Park(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400603CJ male "research_filter, clinical_filter" DLWB63913 5 97043561 97098737 55177 Loss 1 0.897411 36 1576 chas 78.61 Loss 89.11 Loss 89.11 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "55177(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 44 - 0 "55177(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401606CG female "research_filter, clinical_filter" ZRXE40373 12 42011430 42066515 55086 Gain 3 0.885576 40 1412 chas 94.91 Gain 97.25 Gain 0 - GainGain- 38 95.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12q12 - - 0 - 0 - - - - - - 38 - 0 "50995(5|Wong(2007),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400730SH male research_filter YWQF89241 4 161952214 162007295 55082 Gain 3 0.901174 36 1573 chas 93.81 Gain 99.99 Gain 0 - GainGain- 45 92.69 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "55082(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "55082(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400509CJ female research_filter VOUF55858 4 161952214 162007295 55082 Gain 3 0.907161 36 1573 chas 90.82 Gain 94.3 Gain 0 - GainGain- 45 92.66 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "55082(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "55082(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400338SR male research_filter FSGH36026 4 161952214 162007295 55082 Gain 3 0.899539 36 1573 chas 92.57 Gain 95.87 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "55082(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "55082(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401254AE male research_filter YITU99076 3 79967 134991 55025 Gain 3 0.898131 44 1279 chas 87.12 Gain 87.89 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 3p26.3 - - 0 - 0 - - - "55025(8|Itsara(2009),Jakobsson(2008),Pinto(2007),Redon(2006))" 177(1|Levy(2007)) 35 41 - 0 "55025(22|Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Perry(2008b),Jakobsson(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401362ME male research_filter WXKO33327 3 79967 134991 55025 Gain 3 0.902577 44 1279 chas 74.24 Gain 75.17 Gain 0 - GainGain- 41 NA NA NA "ChAS,IPN,NXS" 3p26.3 - - 0 - 0 - - - "55025(8|Itsara(2009),Jakobsson(2008),Pinto(2007),Redon(2006))" 177(1|Levy(2007)) 35 41 - 0 "55025(22|Korbel(2007),Redon(2006),Itsara(2009),Durbin(2010),Perry(2008b),Jakobsson(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400496BL female research_filter ZIOC12306 4 161952214 162007212 54999 Gain 3 0.893887 35 1617 chas 92.71 Gain 96 Gain 0 - GainGain- 45 92.83 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "54999(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "54999(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400852WJ male research_filter PQCI84759 16 6934336 6989258 54923 Loss 1 0.926929 168 328 chas 98.85 Loss 98.89 Loss 99.44 Loss LossLossLoss 68 98.1 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 16p13.3 - RBFOX1 1 - 0 - - - 54923(1|Zogopoulos(2007)) 561(1|Pang(2010)) - 68 - 0 "54923(12|Itsara(2009),Pang(2010),Redon(2006),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400076LC female "research_filter, clinical_filter" IELV11932 11 89492955 89547851 54897 Loss 1 0.893947 19 3049 chas 0 - 0 - 0 - --- 8 NA NA NA ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "54897(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 8 - 0 "54897(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400869BK female - QUIW42968 X 150667338 150722229 54892 Loss 1 0.893133 24 2386 chas 26.94 Loss 0 - 0 - Loss-- 25 NA NA NA "ChAS,IPN" Xq28 - - 0 - 0 - - - "6324(5|Conrad(2009),Matsuzaki(2009))" 991(1|Matsuzaki(2009)) - 25 - 0 "54892(10|Kidd(2008),Durbin(2010),Shaikh(2009),Conrad(2009))" FALSE TRUE ipn_yes algo_yes NA 400926LJ female research_filter FXTM73808 20 29442127 29497009 54883 Loss 1 0.925474 18 3228 chas 0 - 0 - 100 Loss #NAME? 18 NA NA NA "ChAS,PTK" 20q11.21 - - 0 - 0 - - - "54883(11|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Ju(2010),Pang(2010),Gusev(2009),McCarroll(2008))" - 100 18 - 0 "54883(14|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),McCarroll(2008),Perry(2008b))" FALSE TRUE ipn_no algo_yes NA 401030GI female research_filter SRQH11774 20 58382778 58437643 54866 Gain 3 0.898309 48 1167 chas 61.61 Gain 92.54 Gain 0 - GainGain- 35 NA NA NA "ChAS,IPN,NXS" "20q13.32,20q13.33" - PHACTR3 1 PHACTR3 1 - - - 14603(5|Matsuzaki(2009)) - - 35 - 0 "5978(5|Pinto(2011),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401410BJ male research_filter FPLE23103 2 27557445 27612248 54804 Gain 3 0.908042 43 1304 chas 100 Gain 68.21 Gain 0 - GainGain- 16 NA NA NA "ChAS,IPN,NXS" 2p23.3 - "SNX17,PPM1G,EIF2B4,LOC100505624,GTF3C2,ZNF513" 6 "SNX17,PPM1G,EIF2B4,LOC100505624,GTF3C2,ZNF513" 6 "ZNF513,EIF2B4" - - 2193(1|Kidd(2008)) - - 16 - 0 "54804(2|Kidd(2008),Wong(2007))" FALSE TRUE ipn_yes algo_yes NA 400337HG male research_filter BNID76344 11 40537361 40592162 54802 Loss 1 0.92467 56 996 chas 92.72 Loss 96.21 Loss 96.21 Loss LossLossLoss 48 91.33 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 11p12 - - 0 - 0 - - - - - - 48 - 0 "38489(10|Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400994HJ male "research_filter, clinical_filter" PAGW82790 11 49703510 49758260 54751 Loss 1 0.895799 50 1117 chas 85.78 Loss 67.74 Loss 0 - LossLoss- 25 85.5 Loss "BS,IP6" "ChAS,IPN,NXS" 11p11.12 - LOC440040 1 - 0 - - "17846(2|Kidd(2008),Tuzun(2005))" "54751(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 25 - 0 "54751(86|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Campbell(2011),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Pinto(2011),Jakobsson(2008),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400245SJ female "research_filter, clinical_filter" SLNP19984 11 49703510 49758260 54751 Loss 0 0.9593 50 1117 chas 85.78 Loss 87.72 Loss 67.84 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - LOC440040 1 - 0 - - "17846(2|Kidd(2008),Tuzun(2005))" "54751(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 25 - 0 "54751(86|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Campbell(2011),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Pinto(2011),Jakobsson(2008),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401152MV female "research_filter, clinical_filter" NLDQ95097 3 61659102 61713847 54746 Loss 1 0.910101 67 829 chas 100 Loss 99.99 Loss 100 Loss LossLossLoss 41 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p14.2 - PTPRG 1 - 0 - - - 1946(1|Mills(2006)) "401(5|Pang(2010),Levy(2007),McKernan(2009),Hinds(2005),Bentley(2008))" - 41 - 0 "54746(17|Pang(2010),Wong(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Hinds(2006),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" WCXF39029 Y 27691424 27746161 54738 Loss 0 0.846031 44 1272 chas 0 - 0 - 0 - --- 16 0 - - ChAS Yq11.23 - - 0 - 0 - "54738#2%""AZFc"":3056505,""AZFb+AZFc"":7829005" - "54738(5|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 16 - 0 "54738(5|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_no algo_no affy6_no 400788PV male clinical_filter RZMS47755 5 97043561 97098290 54730 Loss 1 0.896669 34 1658 chas 79.25 Loss 87.81 Loss 94 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "54730(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 44 - 0 "54730(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400387HE female "research_filter, clinical_filter" TDHB82208 5 97043561 97098290 54730 Loss 1 0.905016 34 1658 chas 79.25 Loss 93.99 Loss 94 Loss LossLossLoss 44 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "54730(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 44 - 0 "54730(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400923OA female "research_filter, clinical_filter" KWBM98824 X 130866967 130921636 54670 Loss 1 0.917764 62 896 chas 90.87 Loss 0 - 0 - Loss-- 38 NA NA NA "ChAS,IPN" Xq26.2 - LOC286467 1 LOC286467 1 - - - - - - 38 - 0 "51227(6|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" FIIC23299 17 15513053 15567669 54617 Loss 1 0.900931 14 4201 chas 0 - 0 - 0 - --- 12 NA NA NA ChAS 17p12 - "CDRT1,TRIM16" 2 "CDRT1,TRIM16" 2 - - - "4092(2|McCarroll(2008),Altshuler(2010))" 315(1|Wheeler(2008)) 70 12 - 0 "54617(6|Itsara(2009),Altshuler(2010),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400843FL female - RGHO54100 4 161952214 162006824 54611 Gain 3 0.917741 34 1654 chas 93.4 Gain 96.7 Gain 0 - GainGain- 45 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "54611(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 45 - 0 "54611(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401882CR male research_filter OWWR99794 22 31552722 31607329 54608 Loss 1 0.923593 48 1161 chas 79.49 Loss 86.39 Loss 86.39 Loss LossLossLoss 26 NA NA NA "ChAS,IPN,NXS,PTK" 22q12.2 - "RNF185,MIR3928" 2 "RNF185,MIR3928" 2 - - - - - 5 26 - 0 "54608(2|Itsara(2009),Teague(2010))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" WMCV84375 20 14768903 14823472 54570 Loss 1 0.925749 39 1436 chas 76.58 Loss 88.29 Loss 88.29 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "54570(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 67 - 0 "54570(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401249TP female "research_filter, clinical_filter" DOUQ66820 20 14768903 14823472 54570 Loss 1 0.916109 39 1436 chas 76.58 Loss 88.29 Loss 88.29 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "54570(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 67 - 0 "54570(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" AFRT86195 20 14768903 14823472 54570 Loss 1 0.912887 39 1436 chas 76.58 Loss 88.29 Loss 88.29 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "54570(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 67 - 0 "54570(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400844GP male "research_filter, clinical_filter" KWBM98824 20 14768903 14823472 54570 Loss 1 0.933826 39 1436 chas 76.58 Loss 88.29 Loss 88.29 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "54570(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 67 - 0 "54570(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" XZCA75295 20 14768903 14823472 54570 Loss 1 0.929229 39 1436 chas 76.58 Loss 88.29 Loss 88.29 Loss LossLossLoss 67 NA NA NA "ChAS,IPN,NXS,PTK" 20p12.1 - MACROD2 1 - 0 - - - "54570(28|Wang(2007),Shaikh(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),McCarroll(2005),Jakobsson(2008),Itsara(2009),Simon-Sanchez(2007),Zogopoulos(2007))" - - 67 - 0 "54570(101|Korbel(2007),Redon(2006),Wang(2007),Tuzun(2005),Pinto(2007),Pinto(2011),Shaikh(2009),Gusev(2009),Conrad(2006),Kidd(2008),De(Smith_2007),Simon-Sanchez(2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400033KC female "research_filter, clinical_filter" YKLI59783 19 53312370 53366906 54537 Gain 3 0.898871 52 1069 chas 42.88 Gain 54.24 Gain 0 - GainGain- 55 54.63 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19q13.41 - "ZNF468,ZNF28" 2 "ZNF468,ZNF28" 2 - - - "54537(30|Wang(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Itsara(2009),McKernan(2009),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),Kim(2009),Shaikh(2009))" "1025(5|Wheeler(2008),Matsuzaki(2009),Bentley(2008))" 44 55 - 0 "54537(87|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Pinto(2011),McKernan(2009),Altshuler(2010),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),Conrad(2009),Korbel(2007),Cooper(2008),Park(2010),Kim(2009),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" RYUR49963 8 8093066 8147599 54534 Gain 3 0.907189 66 838 chas 82.06 Gain 99.99 Gain 100 Gain GainGainGain 62 97.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54534(16|Kidd(2008)) "54534(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54534(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400177SJ male "research_filter, clinical_filter" BDYF88242 8 8093066 8147599 54534 Gain 3 0.903054 66 838 chas 63.53 Gain 99.99 Gain 0 - GainGain- 62 97.09 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54534(16|Kidd(2008)) "54534(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54534(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401958MF male "research_filter, clinical_filter" WQLL63278 8 8093169 8147599 54431 Gain 4 0.953634 65 850 chas 82.22 Gain 100 Gain 98.08 Gain GainGainGain 62 97.08 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54431(16|Kidd(2008)) "54431(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54431(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400503HD male "research_filter, clinical_filter" JILG60414 8 8093169 8147599 54431 Gain 3 0.902297 65 850 chas 39.96 Gain 98.07 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54431(16|Kidd(2008)) "54431(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54431(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400278PD male "research_filter, clinical_filter" LMDJ78561 8 8093169 8147599 54431 Gain 3 0.906081 65 850 chas 72.79 Gain 100 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54431(16|Kidd(2008)) "54431(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54431(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" JPDY25055 8 8093170 8147599 54430 Gain 3 0.902566 64 863 chas 67.17 Gain 100 Gain 0 - GainGain- 62 97.06 Gain "GTC,IP6" "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54430(16|Kidd(2008)) "54430(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54430(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401102RD male "research_filter, clinical_filter" YJHX17222 8 8093170 8147599 54430 Gain 3 0.899197 64 863 chas 78.61 Gain 98.07 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54430(16|Kidd(2008)) "54430(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54430(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401728WK female "research_filter, clinical_filter" SPYW97422 8 8093170 8147599 54430 Gain 3 0.915083 64 863 chas 72.79 Gain 93.3 Gain 100 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54430(16|Kidd(2008)) "54430(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54430(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400899NK female "research_filter, clinical_filter" DEXW71048 8 8093170 8147599 54430 Gain 3 0.902817 64 863 chas 74.01 Gain 100 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54430(16|Kidd(2008)) "54430(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54430(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400833BB male "research_filter, clinical_filter" STES59258 8 8093170 8147599 54430 Gain 3 0.901729 64 863 chas 72.79 Gain 100 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 8p23.1 - FLJ10661 1 FLJ10661 1 - "28305#1%""8p23.1 deletion syndrome"":3646425" 54430(16|Kidd(2008)) "54430(18|Sebat(2004),Redon(2006),Matsuzaki(2009),Conrad(2009),Wang(2007),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 13 62 - 0 "54430(32|Sebat(2004),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Pinto(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401616WP female "research_filter, clinical_filter" JSHH93314 18 44481531 44535937 54407 Loss 1 0.90342 99 555 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 27 NA NA NA "ChAS,IPN,NXS,PTK" 18q21.1 - "PIAS2,KATNAL2" 2 "PIAS2,KATNAL2" 2 - - - "44502(4|Matsuzaki(2009),Perry(2008))" - - 26 - 0 "54407(8|Teague(2010),Wong(2007),Perry(2008),Durbin(2010),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400719TM female "research_filter, clinical_filter" FDPK98295 13 84101178 84155572 54395 Loss 1 0.905091 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 91.43 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400348DK female "research_filter, clinical_filter" WUVU37744 13 84101178 84155572 54395 Loss 1 0.908703 52 1066 chas 91.64 Loss 87.73 Loss 95.81 Loss LossLossLoss 50 91.41 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" CZJD30358 13 84101178 84155572 54395 Loss 1 0.896638 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 91.43 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400063BR female "research_filter, clinical_filter" TMXA54308 13 84101178 84155572 54395 Loss 1 0.920069 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" UBGH15538 13 84101178 84155572 54395 Loss 1 0.895771 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" OWWC21327 13 84101178 84155572 54395 Loss 1 0.911093 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400547BS female "research_filter, clinical_filter" KWBM98824 13 84101178 84155572 54395 Loss 1 0.92071 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" ZGTI52802 13 84101178 84155572 54395 Loss 1 0.923906 52 1066 chas 91.64 Loss 95.81 Loss 95.81 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 13q31.1 - - 0 - 0 - - - "54395(15|McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Itsara(2009),Altshuler(2010),Bentley(2008),Kidd(2008),Pinto(2007),Redon(2006),Shaikh(2009))" - - 50 - 0 "54395(35|Redon(2006),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Altshuler(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401474CE male "research_filter, clinical_filter" PWPH55056 Y 25555606 25609960 54355 Loss 0 0.839934 69 799 chas 99.04 Loss 0 - 0 - Loss-- 23 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "54355#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "54355(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 23 - 0 "54355(3|McCarroll(2008),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes NA 401804FG male "research_filter, clinical_filter" ENVJ37912 1 166530309 166584653 54345 Loss 1 0.928812 72 765 chas 81.8 Loss 84.84 Loss 84.87 Loss LossLossLoss 55 NA NA NA "ChAS,IPN,NXS,PTK" 1q24.1 - FMO9P 1 FMO9P 1 - - - "41112(4|Conrad(2009),McKernan(2009),Pinto(2007),Redon(2006))" "981(6|Matsuzaki(2009),Bentley(2008))" - 55 - 0 "54345(22|Conrad(2009),Redon(2006),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2007))" TRUE TRUE ipn_yes algo_yes NA 400532MH male "research_filter, clinical_filter" TBVD73320 12 31356711 31411051 54341 Gain 3 0.892837 53 1045 chas 68.97 Gain 95.69 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "54341(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 61 - 0 "54341(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400712GC female "research_filter, clinical_filter" INUW24322 11 55376498 55430811 54314 Gain 3 0.87954 55 1005 chas 0 - 99.86 Gain 0 - -Gain- 36 91.11 Gain GTC "ChAS,NXS" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 54314(1|Korbel(2007)) "54314(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 36 - 0 "54314(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400110MD male "research_filter, clinical_filter" FISX28606 5 109494157 109548459 54303 Loss 1 0.915887 34 1645 chas 84.18 Loss 92.08 Loss 0 - LossLoss- 28 92.21 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5q21.3 - - 0 - 0 - - - 11652(1|Shaikh(2009)) - - 28 - 0 "11652(4|Itsara(2009),Kidd(2008),Shaikh(2009),Teague(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400677HD male "research_filter, clinical_filter" SDOC11846 4 144778903 144833179 54277 Gain 3 0.894293 33 1696 chas 98.33 Gain 100 Gain 100 Gain GainGainGain 21 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q31.21 - GYPE 1 GYPE 1 - - - "54277(14|Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - 100 21 - 0 "54277(22|Korbel(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Perry(2008b),Locke(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400325BE male research_filter ZVON68408 12 31356049 31410284 54236 Gain 3 0.900527 53 1043 chas 94.17 Gain 97.1 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "54236(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 62 - 0 "54236(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400688FL female "research_filter, clinical_filter" QKSF16477 12 31356049 31410284 54236 Gain 3 0.891964 53 1043 chas 86 Gain 97.1 Gain 97.08 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "54236(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 62 - 0 "54236(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" PIAG15925 12 31356049 31410284 54236 Gain 3 0.892984 53 1043 chas 68.7 Gain 89.85 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "54236(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 62 - 0 "54236(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400995MS female "research_filter, clinical_filter" VHVH83554 7 38294983 38349129 54147 Loss 1 0.858592 68 808 chas 0 - 0 - 100 Loss #NAME? 80 100 Loss "BS,IP6" "ChAS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "54147(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 43 80 - 0 "54147(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400198MD male "research_filter, clinical_filter" VUUO47049 7 38294983 38349129 54147 Gain 3 0.88648 68 808 chas 0 - 53.35 Gain 0 - -Gain- 80 NA NA NA "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "54147(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 43 80 - 0 "54147(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400533BB female "research_filter, clinical_filter" CAEK98371 17 36350006 36404136 54131 Loss 1 0.896373 20 2849 chas 0 - 93.12 Loss 0 - -Loss- 1 0 - - "ChAS,NXS" 17q12 - LOC440434 1 LOC440434 1 - - - "54131(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "54131(60|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400243CK male research_filter BDYF88242 17 36350006 36404136 54131 Loss 1 0.915967 20 2849 chas 0 - 98.89 Loss 0 - -Loss- 1 0 - - "ChAS,NXS" 17q12 - LOC440434 1 LOC440434 1 - - - "54131(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "54131(60|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401958MF male research_filter OGJP80646 17 36350006 36404136 54131 Loss 1 0.882208 20 2849 chas 0 - 100 Loss 0 - -Loss- 1 NA NA NA "ChAS,NXS" 17q12 - LOC440434 1 LOC440434 1 - - - "54131(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "54131(60|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400704LC female research_filter HEAQ37888 17 36350006 36404136 54131 Gain 4 0.935625 20 2849 chas 0 - 100 Gain 0 - -Gain- 1 0 - - "ChAS,NXS" 17q12 - LOC440434 1 LOC440434 1 - - - "54131(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "54131(60|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 400956AM male research_filter LAJJ28425 1 188639767 188693880 54114 Loss 1 0.906502 36 1546 chas 72.74 Loss 71.25 Loss 74.33 Loss LossLossLoss 27 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - 7821(1|Shaikh(2009)) - - 27 - 0 "18822(5|Jakobsson(2008),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400728PB female "research_filter, clinical_filter" HAGL80690 17 13180095 13234204 54110 Gain 3 0.903172 52 1060 chas 100 Gain 100 Gain 0 - GainGain- 48 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17p12 - - 0 - 0 - - - "2811(2|Conrad(2009),McKernan(2009))" "806(5|Wang(2008),Wheeler(2008),Ahn(2009),Bentley(2008))" - 48 - 0 "54110(23|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400542EG female "research_filter, clinical_filter" MWRB65708 3 41093451 41147544 54094 Loss 1 0.915789 44 1258 chas 89.12 Loss 94.33 Loss 94.33 Loss LossLossLoss 53 95.11 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p22.1 - - 0 - 0 - - - - - - 53 - 0 - TRUE TRUE ipn_yes algo_yes affy6_yes 400267GD female "research_filter, clinical_filter" UIPG73190 16 74397974 74452024 54051 Gain 4 0.962302 13 4504 chas 0 - 20.85 Gain 0 - -Gain- 7 NA NA NA "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "54051(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 95 6 - 0 "54051(86|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401809FU female research_filter EUQI28257 16 74397974 74452023 54050 Loss 1 0.920049 12 4913 chas 0 - 20.85 Loss 0 - -Loss- 6 0 - - "ChAS,NXS" 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "54050(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 95 6 - 0 "54050(86|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400920MK female research_filter GUYS21436 16 74397974 74452023 54050 Loss 1 0.903861 12 4913 chas 0 - 0 - 0 - --- 6 NA NA NA ChAS 16q23.1 - "LOC283922,CLEC18B" 2 "LOC283922,CLEC18B" 2 - - - "54050(24|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" - 95 6 - 0 "54050(86|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Durbin(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Ju(2010),Kim(2009),De(Smith_2007))" FALSE TRUE ipn_no algo_no NA 400582WS female - XGQH24350 14 22746792 22800835 54044 Loss 1 0.850719 96 568 chas 0 - 0 - 100 Loss #NAME? 38 NA NA NA "ChAS,PTK" 14q11.2 - - 0 - 0 - - - "54044(11|Sebat(2004),Conrad(2009),Levy(2007),McKernan(2009),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "872(6|Conrad(2009),Ju(2010),Wang(2008),Bentley(2008),Park(2010),Mills(2006))" - 38 - 0 "54044(55|Sebat(2004),Wong(2007),Wang(2008),Conrad(2009),Ju(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pinto(2011),Wilson(2010),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_no algo_yes NA 401215MJ female "research_filter, clinical_filter" ERUW26412 Y 14499154 14553163 54010 Loss 0 0.936664 36 1543 chas 88.2 Loss 0 - 0 - Loss-- 23 NA NA NA "ChAS,IPN" Yq11.21 - GYG2P1 1 GYG2P1 1 - "54010#1%""AZFa"":802102" - - - 91 23 - 0 54010(4|Durbin(2010)) TRUE TRUE ipn_yes algo_yes NA 401308LD male "research_filter, clinical_filter" PXVB29564 6 26704905 26758893 53989 Loss 1 0.860542 11 5398 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53989(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53989(23|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53989(82|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400818BL female - WHOU87472 6 26704905 26758893 53989 Loss 1 0.889138 11 5398 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53989(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53989(23|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53989(82|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401380OL male - QWII30838 6 26704905 26758893 53989 Loss 1 0.891466 11 5398 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53989(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53989(23|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53989(82|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 402061PI female - RPWI18802 6 26704905 26758893 53989 Loss 1 0.877683 11 5398 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53989(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53989(23|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53989(82|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401580CA male - UAVX81306 22 49351462 49405431 53970 Gain 3 0.896965 46 1199 chas 73.69 Gain 96.07 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" "22q13.32,22q13.33" - - 0 - 0 - - - "33071(14|Park(2010),Kidd(2008),McKernan(2009),Matsuzaki(2009),Conrad(2009))" 103(1|Bentley(2008)) - 57 - 0 "53970(40|Conrad(2009),Wong(2007),Jakobsson(2008),Pinto(2011),Teague(2010),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Kidd(2008),Park(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400643LD male research_filter NHGO29651 12 31357102 31411051 53950 Gain 3 0.895864 51 1079 chas 92.72 Gain 99.08 Gain 0 - GainGain- 60 92.72 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "53950(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "53950(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400524NJ female "research_filter, clinical_filter" GPXE42967 7 38294983 38348927 53945 Loss 1 0.855849 66 829 chas 0 - 0 - 0 - --- 79 100 Loss "BS,IP6" ChAS 7p14.1 - TARP 1 TARP 1 - - - "53945(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 43 78 - 0 "53945(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_yes 400006DK female clinical_filter JXQB25794 1 1616990 1670919 53930 Loss 1 0.901367 36 1540 chas 91.11 Loss 83.8 Loss 0 - LossLoss- 20 79.74 Loss "BS,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "53930#1%""1p36 microdeletion syndrome"":5408761" - "53930(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "53930(49|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" ZXNE12672 1 1616990 1670919 53930 Loss 1 0.906668 36 1540 chas 91.11 Loss 97.64 Loss 0 - LossLoss- 20 79.76 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "53930#1%""1p36 microdeletion syndrome"":5408761" - "53930(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "53930(49|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400070PC female "research_filter, clinical_filter" YDIQ26421 13 43734690 43788603 53914 Gain 4 0.940886 50 1100 chas 87.95 Gain 94.05 Gain 94.05 Gain GainGainGain 47 NA NA NA "ChAS,IPN,NXS,PTK" 13q14.11 - ENOX1 1 ENOX1 1 - - - "53914(4|de Smith(2007),Pinto(2007),Shaikh(2009))" - - 46 - 0 "53914(4|Durbin(2010),Wong(2007),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401591BE female "research_filter, clinical_filter" GTDY31038 13 43734690 43788602 53913 Gain 4 0.933986 49 1123 chas 84.84 Gain 94.05 Gain 86.39 Gain GainGainGain 46 NA NA NA "ChAS,IPN,NXS,PTK" 13q14.11 - ENOX1 1 ENOX1 1 - - - "53913(4|de Smith(2007),Pinto(2007),Shaikh(2009))" - - 46 - 0 "53913(4|Durbin(2010),Wong(2007),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401860TJ male research_filter QMDZ51984 22 42918727 42972591 53865 Gain 3 0.90687 24 2341 chas 99.98 Gain 92.3 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 22q13.2 - "SERHL2,RRP7B" 2 "SERHL2,RRP7B" 2 - - - "53865(14|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),McKernan(2009),Pang(2010),McCarroll(2008),Park(2010))" - 54 23 - 0 "53865(82|Conrad(2009),Korbel(2007),Redon(2006),Perry(2008),McKernan(2009),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Perry(2008b),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401979TB male research_filter PUOR77387 16 2693454 2747311 53858 Gain 3 0.897771 32 1737 chas 42.53 Gain 0 - 0 - Gain-- 20 NA NA NA "ChAS,IPN" 16p13.3 - "KCTD5,FLJ42627,ERVK13-1" 3 "KCTD5,FLJ42627,ERVK13-1" 3 - - - "53858(17|Conrad(2009),Ahn(2009),Perry(2008),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Simon-Sanchez(2007))" - 95 20 - 0 "53858(57|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Altshuler(2010),Shaikh(2009),Park(2010),Pinto(2011),Jakobsson(2008),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401603HH female research_filter HQWW55061 X 76324803 76378644 53842 Loss 1 0.877878 21 2692 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400523GB female - FSQK31243 X 76324803 76378644 53842 Loss 1 0.865296 21 2692 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400863SS female - PYJA98100 X 76324803 76378644 53842 Loss 1 0.864599 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401981GF female - QWII30838 X 76324803 76378644 53842 Loss 1 0.875823 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 402061PI female - VXMJ58338 X 76324803 76378644 53842 Loss 1 0.870283 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400044HS female - GSWW54097 X 76324803 76378644 53842 Loss 1 0.873973 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401620BA female - FGSE34256 X 76324803 76378644 53842 Loss 1 0.868093 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401646MC female - IDVO19613 X 76324803 76378644 53842 Loss 1 0.870969 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401434VN female - CHNV74218 X 76324803 76378644 53842 Loss 1 0.878727 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400837HN female - GDZR23108 X 76324803 76378644 53842 Loss 1 0.87757 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400375KA female - MGJR69521 X 76324803 76378644 53842 Loss 1 0.873998 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401251WN female - ROFY65487 X 76324803 76378644 53842 Loss 1 0.878763 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400683EC female - VBEF49630 X 76324803 76378644 53842 Loss 1 0.871093 21 2692 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400022WA female - BTBU94149 X 76324803 76378644 53842 Gain 3 0.872794 21 2692 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53842(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401177SL female - ZQHJ50767 X 76324810 76378644 53835 Loss 1 0.880925 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400888MS female - GYNG28087 X 76324810 76378644 53835 Loss 1 0.869818 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400520FM female - VTLK66107 X 76324810 76378644 53835 Loss 1 0.886617 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401153HS female - OFVS61400 X 76324810 76378644 53835 Loss 1 0.875416 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401143LK female - HXSU46589 X 76324810 76378644 53835 Loss 1 0.881429 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401299ST female - OPOQ31165 X 76324810 76378644 53835 Loss 1 0.879372 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400795CL female - LAJJ28425 X 76324810 76378644 53835 Loss 1 0.868069 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400728PB female - KWJN47187 X 76324810 76378644 53835 Loss 1 0.86752 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400821FE female - QCLE90373 X 76324810 76378644 53835 Loss 1 0.871705 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401053MF female - GKVG35266 X 76324810 76378644 53835 Loss 1 0.869457 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400248JO female - ORXH15927 X 76324810 76378644 53835 Loss 1 0.876661 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400266BA female - YMBI36841 X 76324810 76378644 53835 Loss 1 0.872075 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401321CE female - BQFC38547 X 76324810 76378644 53835 Loss 1 0.896927 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400238BB female - ALWU32623 X 76324810 76378644 53835 Loss 1 0.879304 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400595CP female - EGQB52790 X 76324810 76378644 53835 Loss 1 0.870987 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400277LM female - VLMR80827 X 76324810 76378644 53835 Loss 1 0.869699 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401630MK female - AGIM53957 X 76324810 76378644 53835 Loss 1 0.875285 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400564SN female - QUHC56771 X 76324810 76378644 53835 Loss 1 0.870879 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400128MJ female - KLEB18411 X 76324810 76378644 53835 Loss 1 0.872194 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400300SD female - WLVX71025 X 76324810 76378644 53835 Loss 1 0.874211 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400064WJ female - NQBM70678 X 76324810 76378644 53835 Loss 1 0.874725 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400084DM female - PYWH93436 X 76324810 76378644 53835 Loss 1 0.892453 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400270BD female - CSHY74530 X 76324810 76378644 53835 Loss 1 0.88613 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400148MS female - LLZZ76842 X 76324810 76378644 53835 Loss 1 0.86707 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400354TJ female - AVGX21589 X 76324810 76378644 53835 Loss 1 0.877418 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400379BB_1 female - QGND60775 X 76324810 76378644 53835 Loss 1 0.870857 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401085LA_1 female - YYJA27879 X 76324810 76378644 53835 Loss 1 0.871743 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401074CM_1 female - WKAY66815 X 76324810 76378644 53835 Loss 1 0.874447 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400681MC female - ZSEZ81141 X 76324810 76378644 53835 Loss 1 0.86517 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400240HJ female - PAGW82790 X 76324810 76378644 53835 Loss 1 0.884038 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400245SJ female - UCHK30425 X 76324810 76378644 53835 Loss 1 0.879062 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400385LJ female - YQHR22161 X 76324810 76378644 53835 Loss 1 0.86919 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400845ML female - QRLG88085 X 76324810 76378644 53835 Loss 1 0.863854 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400759FV female - IAEL45337 X 76324810 76378644 53835 Loss 1 0.870117 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400424LN female - PRHX42947 X 76324810 76378644 53835 Loss 1 0.8784 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400429YF female - WVAB12930 X 76324810 76378644 53835 Loss 1 0.871173 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400655WB female - VYEA28313 X 76324810 76378644 53835 Loss 1 0.870864 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400983PV female - THXY16685 X 76324810 76378644 53835 Loss 1 0.883296 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400114GR female - UYMD11362 X 76324810 76378644 53835 Loss 1 0.870424 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400030WD female - OBAS32636 X 76324810 76378644 53835 Loss 1 0.869286 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400249BC female - QKWF92816 X 76324810 76378644 53835 Loss 1 0.868731 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400295PS female - JGYN82468 X 76324810 76378644 53835 Loss 1 0.882414 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400722OM female - QUIW42968 X 76324810 76378644 53835 Loss 1 0.874325 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400926LJ female - FXTM73808 X 76324810 76378644 53835 Loss 1 0.889307 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401030GI female - IWPA56866 X 76324810 76378644 53835 Loss 1 0.872618 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401700BN_1 female - TMXA54308 X 76324810 76378644 53835 Loss 1 0.875242 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400478WE female - BQMP83404 X 76324810 76378644 53835 Loss 1 0.872611 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400474GF female - PBNY43846 X 76324810 76378644 53835 Loss 1 0.863057 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400702PA female - YJHX17222 X 76324810 76378644 53835 Loss 1 0.872512 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401728WK female - DOJD65755 X 76324810 76378644 53835 Loss 1 0.878118 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 402023EC female - OBHQ36250 X 76324810 76378644 53835 Loss 1 0.866157 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401011PJ female - BLGS11062 X 76324810 76378644 53835 Loss 1 0.881676 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401714BM female - XGQH24350 X 76324810 76378644 53835 Loss 1 0.873865 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401215MJ female - CVYW15790 X 76324810 76378644 53835 Loss 1 0.86944 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401552BK female - LCAJ69904 X 76324810 76378644 53835 Loss 1 0.860172 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401595BL female - RIQO94770 X 76324810 76378644 53835 Loss 1 0.867651 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 402062KR female - ZHGO36222 X 76324810 76378644 53835 Loss 1 0.87109 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401135CS female - XQAG43010 X 76324810 76378644 53835 Loss 1 0.876517 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400953MR female - UPRR75789 X 76324810 76378644 53835 Loss 1 0.89178 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400889CM female - OWWC21327 X 76324810 76378644 53835 Loss 1 0.868155 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400547BS female - TCTA60809 X 76324810 76378644 53835 Loss 1 0.881674 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401965TG female - IEKT57966 X 76324810 76378644 53835 Loss 1 0.872712 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400274TL female - DCUN59806 X 76324810 76378644 53835 Loss 1 0.87043 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400316SL female - TPCN38834 X 76324810 76378644 53835 Loss 1 0.870232 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400879DS female - THNQ55263 X 76324810 76378644 53835 Loss 1 0.881482 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400960TN female - APCI57441 X 76324810 76378644 53835 Loss 1 0.86428 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401832MC female - QBLX62038 X 76324810 76378644 53835 Loss 1 0.867891 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401681MS female - SMGW17663 X 76324810 76378644 53835 Loss 1 0.879275 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400362TV female - JABM59002 X 76324810 76378644 53835 Loss 1 0.869981 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400328LM female - NQKM94057 X 76324810 76378644 53835 Loss 1 0.868532 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400917CG female - APGE11753 X 76324810 76378644 53835 Loss 1 0.886671 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401017SC female - PRED73338 X 76324810 76378644 53835 Loss 1 0.867309 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401183HP female - PRPG47770 X 76324810 76378644 53835 Loss 1 0.875283 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401695BT female - ATJL19217 X 76324810 76378644 53835 Loss 1 0.874927 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401608GE female - TZXJ50703 X 76324810 76378644 53835 Loss 1 0.863396 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400978JG female - QDNW53844 X 76324810 76378644 53835 Loss 1 0.869916 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400729HC female - RXUT32164 X 76324810 76378644 53835 Loss 1 0.880678 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401813DN female - AXWL27269 X 76324810 76378644 53835 Loss 1 0.886466 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401962BK female - XSKZ13040 X 76324810 76378644 53835 Loss 1 0.875437 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401824MM female - INSC49339 X 76324810 76378644 53835 Loss 1 0.873229 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401334DH female - LELT20618 X 76324810 76378644 53835 Loss 1 0.865776 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400211BJ female - RQNQ20012 X 76324810 76378644 53835 Loss 1 0.879072 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401326LI female - LLRB50237 X 76324810 76378644 53835 Loss 1 0.870036 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401594MP female - IENJ56420 X 76324810 76378644 53835 Loss 1 0.873341 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401538NS female - SSWV37655 X 76324810 76378644 53835 Loss 1 0.873498 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401706BJ female - TDDJ68763 X 76324810 76378644 53835 Loss 1 0.88108 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401250WD female - YSDD20509 X 76324810 76378644 53835 Loss 1 0.873633 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400333CC female - EATF12348 X 76324810 76378644 53835 Loss 1 0.876088 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400352CA female - DLYI64271 X 76324810 76378644 53835 Loss 1 0.861026 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401292ER female - FIIC23299 X 76324810 76378644 53835 Loss 1 0.882903 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400843FL female - CETD95374 X 76324810 76378644 53835 Loss 1 0.876613 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401331LJ female - NNNK99860 X 76324810 76378644 53835 Loss 1 0.87585 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400439IM female - KTQJ52506 X 76324810 76378644 53835 Loss 1 0.878082 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400218WK female - DMKI43381 X 76324810 76378644 53835 Loss 1 0.879548 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400763BT female - TGEC92715 X 76324810 76378644 53835 Loss 1 0.879759 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 4000046CJ female - JAVP94180 X 76324810 76378644 53835 Loss 1 0.885445 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401932GN female - GUYS21436 X 76324810 76378644 53835 Loss 1 0.893933 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 400582WS female - USNP20353 X 76324810 76378644 53835 Gain 4 0.895875 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400082SD female - TZAD89276 X 76324810 76378644 53835 Gain 4 0.880946 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 401185LE female - LTTD14271 X 76324810 76378644 53835 Gain 3 0.871593 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400050RL female - EJLX27201 X 76324810 76378644 53835 Gain 3 0.880225 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400545EW_1 female - RKMW41925 X 76324810 76378644 53835 Gain 4 0.877631 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400323AA female - QMSH77829 X 76324810 76378644 53835 Gain 2 0.792926 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400038CK male - UJRI14149 X 76324810 76378644 53835 Gain 3 0.871839 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400227MM female - CBEA57280 X 76324810 76378644 53835 Gain 3 0.866438 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400231LP female - VWRZ18168 X 76324810 76378644 53835 Gain 2 0.77801 20 2833 chas 0 - 0 - 0 - --- 7 0 - - ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no affy6_no 400890IT male - NJBJ54022 X 76324810 76378644 53835 Gain 3 0.864772 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401066MM female - IUXY17884 X 76324810 76378644 53835 Gain 2 0.81362 20 2833 chas 0 - 0 - 0 - --- 7 NA NA NA ChAS Xq21.1 - - 0 - 0 - - - - - 3 6 - 0 53835(11|Durbin(2010)) FALSE TRUE ipn_no algo_no NA 401238QR male - OWWC21327 1 72758694 72812526 53833 Gain 3 0.908713 34 1631 chas 75.31 Gain 80.72 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 1p31.1 - - 0 - 0 - - - "53833(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 56 - 0 "53833(274|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400547BS female research_filter LVBF79370 18 58258788 58312592 53805 Gain 3 0.897751 28 1992 chas 92.04 Gain 64.48 Gain 0 - GainGain- 25 NA NA NA "ChAS,IPN,NXS" 18q21.32 - - 0 - 0 - - - 37531(1|Shaikh(2009)) - - 25 - 0 "53805(5|Itsara(2009),Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401287CF male research_filter FPHR45460 X 90208343 90262137 53795 Loss 1 0.878431 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 401104DM female - NFIA96453 X 90208343 90262137 53795 Loss 1 0.887762 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400069CN female - NUHG48677 X 90208343 90262137 53795 Loss 1 0.886329 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 40050SB female - GQSZ37539 X 90208343 90262137 53795 Loss 1 0.885007 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400455SJ female - PQCI84759 X 90208343 90262137 53795 Loss 1 0.870542 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400076LC female - ZJNH41176 X 90208343 90262137 53795 Loss 1 0.862846 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400285FA female - GRYY36123 X 90208343 90262137 53795 Loss 1 0.884286 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 40031BA female - PAIU48992 X 90208343 90262137 53795 Loss 1 0.866161 16 3586 chas 0 - 0 - 0 - --- 15 0 - - ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no affy6_no 400622SJ female - UOXQ52793 X 90208343 90262137 53795 Loss 1 0.861743 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400791GC female - PXVB29564 X 90208343 90262137 53795 Loss 1 0.894272 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400818BL female - NJBJ54022 X 90208343 90262137 53795 Loss 1 0.893911 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401066MM female - YTOE66394 X 90208343 90262137 53795 Gain 2 0.869107 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401454CD male - PYJA98100 X 90208343 90262137 53795 Loss 1 0.883917 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401981GF female - JABM59002 X 90208343 90262137 53795 Loss 1 0.896285 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400328LM female - KSNB36135 X 90208343 90262137 53795 Loss 1 0.887258 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401677MM female - TAVH54072 X 90208343 90262137 53795 Loss 1 0.878129 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400948EV female - XOQW96687 X 90208343 90262137 53795 Loss 1 0.879199 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 400121PL female - SSWV37655 X 90208343 90262137 53795 Loss 1 0.874474 16 3586 chas 0 - 0 - 0 - --- 15 NA NA NA ChAS Xq21.31 - - 0 - 0 - - - "53795(2|Conrad(2009),Redon(2006))" - 100 15 - 0 "53795(4|Conrad(2009),Redon(2006),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401706BJ female - CSHY74530 X 134874972 134928736 53765 Gain 3 0.900916 148 365 chas 40.03 Gain 0 - 0 - Gain-- 37 75.2 Gain "BS,GTC,IP6" "ChAS,IPN" Xq26.3 - "CT45A3,CT45A4" 2 "CT45A3,CT45A4" 2 - - 53765(1|Kidd(2008)) "53765(16|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" - 84 36 - 0 "53765(28|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" KWBM98824 17 67268117 67321879 53763 Loss 1 0.919568 40 1378 chas 79.19 Loss 90.39 Loss 90.39 Loss LossLossLoss 21 NA NA NA "ChAS,IPN,NXS,PTK" 17q24.3 - ABCA5 1 ABCA5 1 - - - - - - 21 - 0 "53763(3|Itsara(2009),Pinto(2011),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" XSKZ13040 4 58048810 58102553 53744 Gain 3 0.917382 34 1628 chas 86.92 Gain 89.05 Gain 0 - GainGain- 46 NA NA NA "ChAS,IPN,NXS" 4q12 - LOC255130 1 LOC255130 1 - - - "52353(7|Conrad(2009),Perry(2008),Itsara(2009),McKernan(2009),Shaikh(2009),Zogopoulos(2007))" "927(8|Ahn(2009),Wang(2008),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 45 - 0 "52353(40|Conrad(2009),Ahn(2009),Redon(2006),Perry(2008),Teague(2010),Itsara(2009),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401824MM female research_filter OAZH14211 6 26704905 26758635 53731 Loss 1 0.880578 10 5970 chas 0 - 0 - 0 - --- 26 99.63 Loss "BS,GTC,IP6" ChAS 6p22.2 - - 0 - 0 - - "53731(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53731(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53731(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400246MG male - NLWZ33045 6 26704905 26758635 53731 Loss 1 0.864637 10 5970 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53731(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53731(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53731(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401993HM female - KSNB36135 10 46966534 47020234 53701 Loss 1 0.857376 68 801 chas 0 - 0 - 0 - --- 46 NA NA NA ChAS 10q11.22 - "GPRIN2,SYT15" 2 "GPRIN2,SYT15" 2 - - 9916(1|Pang(2010)) "53701(33|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),McKernan(2009),Park(2010),Conrad(2009),Pinto(2007),McCarroll(2005),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 46 - 0 "53701(175|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Wang(2007),Sebat(2004),Park(2010),Pinto(2011),Jakobsson(2008),Schuster(2010),Ju(2010),McCarroll(2006),Shaikh(2009),Wong(2007))" TRUE TRUE ipn_no algo_no NA 401677MM female clinical_filter YWSA20061 11 89602560 89656239 53680 Loss 1 0.917216 8 7668 chas 0 - 0 - 0 - --- 4 0 - - ChAS 11q14.3 - "LOC399939,TRIM64B,TRIM49L1" 3 "LOC399939,TRIM64B,TRIM49L1" 3 - - 17538(1|Kidd(2008)) "53680(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Park(2010),Kim(2009))" 1(1|Levy(2007)) 99 4 - 0 "53680(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009))" FALSE TRUE ipn_no algo_no NA 400101EH female - TQQL83388 11 89602560 89656239 53680 Loss 1 0.937223 8 7668 chas 0 - 0 - 0 - --- 4 0 - - ChAS 11q14.3 - "LOC399939,TRIM64B,TRIM49L1" 3 "LOC399939,TRIM64B,TRIM49L1" 3 - - 17538(1|Kidd(2008)) "53680(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Park(2010),Kim(2009))" 1(1|Levy(2007)) 99 4 - 0 "53680(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009))" FALSE TRUE ipn_no algo_no NA 401365DJ male - MWRB65708 11 89602560 89656239 53680 Loss 1 0.925785 8 7668 chas 0 - 0 - 0 - --- 4 0 - - ChAS 11q14.3 - "LOC399939,TRIM64B,TRIM49L1" 3 "LOC399939,TRIM64B,TRIM49L1" 3 - - 17538(1|Kidd(2008)) "53680(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Park(2010),Kim(2009))" 1(1|Levy(2007)) 99 4 - 0 "53680(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009))" FALSE TRUE ipn_no algo_no NA 400267GD female - NJBJ54022 11 89602560 89656239 53680 Loss 1 0.914995 8 7668 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 11q14.3 - "LOC399939,TRIM64B,TRIM49L1" 3 "LOC399939,TRIM64B,TRIM49L1" 3 - - 17538(1|Kidd(2008)) "53680(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Park(2010),Kim(2009))" 1(1|Levy(2007)) 99 4 - 0 "53680(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009))" FALSE TRUE ipn_no algo_no NA 401066MM female - ISVP82924 11 89602560 89656239 53680 Loss 1 0.917338 8 7668 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 11q14.3 - "LOC399939,TRIM64B,TRIM49L1" 3 "LOC399939,TRIM64B,TRIM49L1" 3 - - 17538(1|Kidd(2008)) "53680(12|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),Park(2010),Kim(2009))" 1(1|Levy(2007)) 99 4 - 0 "53680(29|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Pinto(2011),Conrad(2009),Locke(2006),Kidd(2008),Durbin(2010),Park(2010),Kim(2009))" FALSE TRUE ipn_no algo_no NA 401400NP male - GUWW37548 6 68683443 68737122 53680 Gain 3 0.895815 36 1533 chas 99.98 Gain 91.2 Gain 0 - GainGain- 39 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 6q12 - - 0 - 0 - - - 6014(1|Pinto(2007)) 252(1|Wheeler(2008)) - 39 - 0 "53680(3|Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401195PN male research_filter NJNE14201 11 55386384 55439978 53595 Gain 3 0.878524 60 908 chas 0 - 100 Gain 0 - -Gain- 28 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "52551(2|Kidd(2008),Korbel(2007))" "53595(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 27 - 0 "53595(718|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401393JW male "research_filter, clinical_filter" QYCK62831 11 55386384 55439978 53595 Gain 3 0.882771 60 908 chas 0 - 87.17 Gain 0 - -Gain- 28 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "52551(2|Kidd(2008),Korbel(2007))" "53595(59|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 27 - 0 "53595(718|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401556KR male "research_filter, clinical_filter" BTBU94149 5 152930816 152984386 53571 Gain 3 0.902879 82 661 chas 98.13 Gain 98.77 Gain 100 Gain GainGainGain 63 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q33.2 - GRIA1 1 - 0 - - - - - - 63 - 0 "11226(5|Teague(2010),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401177SL female "research_filter, clinical_filter" ELXG87337 17 36350598 36404138 53541 Loss 1 0.897163 17 3346 chas 0 - 99.99 Loss 0 - -Loss- 1 0 - - "ChAS,NXS" 17q12 - LOC440434 1 LOC440434 1 - - - "53541(14|Pang(2010),Conrad(2009),Matsuzaki(2009),Ju(2010))" - 100 1 - 0 "53541(57|Conrad(2009),Wong(2007),Redon(2006),Ju(2010),Durbin(2010),Pang(2010),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401634CH male research_filter JVBB89605 2 112322501 112375995 53495 Loss 1 0.858889 16 3566 chas 0 - 0 - 0 - --- 12 0 - - ChAS 2q13 - - 0 - 0 - - - "52484(3|Conrad(2009),Matsuzaki(2009),Perry(2008))" - 94 12 - 0 "53495(23|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Durbin(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no affy6_no 400650RM male - UECJ73760 5 117005836 117059326 53491 Loss 1 0.919745 40 1371 chas 100 Loss 100 Loss 100 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 5q23.1 - - 0 - 0 - - - 49310(1|Shaikh(2009)) - - 41 - 0 "53491(3|Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401057SS male "research_filter, clinical_filter" BTMS28214 5 104478113 104531520 53408 Loss 1 0.938926 36 1525 chas 96.13 Loss 98.08 Loss 100 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" "5q21.3,5q21.2" - - 0 - 0 - - - "53408(13|Wang(2007),Redon(2006),Perry(2008),Kidd(2008),de Smith(2007),Itsara(2009),Conrad(2009),McCarroll(2008),Shaikh(2009),Mills(2006))" - - 37 - 0 "53408(44|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Kidd(2010b),Itsara(2009),Pinto(2011),Conrad(2006),Durbin(2010),Kidd(2008),Conrad(2009),McCarroll(2008),Cooper(2008),Perry(2008b),Locke(2006),Redon(2006),De(Smith_2007),Shaikh(2009),Mills(2006))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" LDEW86321 13 44573372 44626749 53378 Loss 1 0.917673 44 1241 chas 77.69 Loss 60.37 Loss 88.83 Loss LossLossLoss 30 86.57 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 13q14.11 - LINC00284 1 LINC00284 1 - - - - - - 30 - 0 - TRUE TRUE ipn_yes algo_yes affy6_yes 401786WD male "research_filter, clinical_filter" VZJA70154 14 73995761 74049135 53375 Gain 3 0.888427 43 1270 chas 26.74 Gain 43.47 Gain 0 - GainGain- 22 37.2 Gain IP6 "ChAS,IPN,NXS" 14q24.3 - "HEATR4,ACOT2,ACOT1" 3 "HEATR4,ACOT2,ACOT1" 3 - - - "53375(41|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Pang(2010),Kidd(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" 704(1|Park(2010)) 91 21 - 0 "53375(211|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Perry(2008b),Pang(2010),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),McKernan(2009),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Levy(2007),Schuster(2010),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 401427CB male research_filter JYQV48819 11 89498349 89551714 53366 Loss 1 0.89794 22 2541 chas 0 - 0 - 0 - --- 11 0 - - ChAS 11q14.3 - TRIM49 1 TRIM49 1 - - - "53366(16|Conrad(2009),Redon(2006),Perry(2008),Matsuzaki(2009),de Smith(2007),Park(2010))" - 100 11 - 0 "53366(38|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Park(2010),Pinto(2011),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_no 400449PK female - APGE11753 9 10853003 10906334 53332 Loss 1 0.912515 28 1975 chas 100 Loss 92.72 Loss 0 - LossLoss- 28 NA NA NA "ChAS,IPN,NXS" 9p23 - - 0 - 0 - - - 3519(1|Shaikh(2009)) - - 28 - 0 "15285(4|Itsara(2009),Pinto(2011),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" NKHQ61532 2 52737183 52790493 53311 Loss 1 0.897631 16 3554 chas 0 - 73.37 Loss 0 - -Loss- 53 56.22 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 53 - 0 "53311(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400588BE female research_filter THNQ55263 11 99048395 99101692 53298 Loss 1 0.921307 56 969 chas 80.8 Loss 90.33 Loss 90.34 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 11q22.1 - CNTN5 1 - 0 - - - - "1104(2|Pang(2010),Bentley(2008))" - 50 - 0 "53298(12|Redon(2006),Itsara(2009),Levy(2007),Durbin(2010),Bentley(2008),Pang(2010),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400960TN female "research_filter, clinical_filter" VABQ19693 11 55376485 55429745 53261 Loss 1 0.866951 53 1024 chas 100 Loss 0 - 0 - Loss-- 34 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4S2" 2 "OR4P4,OR4S2" 2 - - 53261(1|Korbel(2007)) "53261(54|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 34 - 0 "53261(713|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" LTTD14271 4 68346 121594 53249 Gain 3 0.903434 142 377 chas 98.22 Gain 99.98 Gain 100 Gain GainGainGain 37 99.94 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4p16.3 - "ZNF718,ZNF595" 2 ZNF595 1 - "53249#1%""Wolf-Hirschhorn Syndrome"":2073670" - "53249(7|Wang(2007),Ahn(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 37 - 0 "53249(19|Wang(2007),Ahn(2009),Perry(2008),Kidd(2008),Wang(2008),Durbin(2010),Itsara(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" DSDE67128 X 19444528 19497755 53228 Loss 1 0.929776 56 967 chas 92.57 Loss 0 - 0 - Loss-- 44 NA NA NA "ChAS,IPN" Xp22.12 - MAP3K15 1 MAP3K15 1 - - - "13082(2|Conrad(2009),Matsuzaki(2009))" - - 44 - 0 "5742(5|Conrad(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401125LM female "research_filter, clinical_filter" WUMM65746 7 38295932 38349129 53198 Loss 1 0.880587 66 818 chas 0 - 0 - 71.84 Loss #NAME? 79 100 Loss "BS,GTC,IP6" "ChAS,PTK" 7p14.1 - TARP 1 TARP 1 - - - "53198(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 42 79 - 0 "53198(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" TGGX58243 7 38295932 38349129 53198 Loss 1 0.868126 66 818 chas 0 - 0 - 0 - --- 79 NA NA NA ChAS 7p14.1 - TARP 1 TARP 1 - - - "53198(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 42 79 - 0 "53198(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 400942HR male clinical_filter TFBW53379 3 4183925 4237101 53177 Loss 1 0.928586 40 1363 chas 98.17 Loss 99.02 Loss 99.02 Loss LossLossLoss 42 99.88 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "53177(21|Conrad(2009),McKernan(2009),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Altshuler(2010),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 1(1|Levy(2007)) - 42 - 0 "53177(33|Conrad(2009),McKernan(2009),Redon(2006),Perry(2008),Itsara(2009),Altshuler(2010),Durbin(2010),Pinto(2007),Campbell(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" TBVD73320 14 35735463 35788639 53177 Gain 3 0.88868 68 793 chas 99.25 Gain 78.44 Gain 0 - GainGain- 32 NA NA NA "ChAS,IPN,NXS" 14q13.2 - "PSMA6,KIAA0391" 2 "PSMA6,KIAA0391" 2 PSMA6 - - - - - 32 - 0 "21980(5|Pinto(2011),Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400712GC female "research_filter, clinical_filter" OYDK45967 6 26704905 26758030 53126 Loss 1 0.85368 9 6640 chas 0 - 0 - 0 - --- 26 39.53 Loss "BS,IP6" ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 401162TM female - DBFY56089 6 26704905 26758030 53126 Loss 1 0.880874 9 6640 chas 0 - 0 - 0 - --- 26 39.55 Loss "BS,GTC,IP6" ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400458LS female - TZAD89276 6 26704905 26758030 53126 Loss 1 0.87967 9 6640 chas 0 - 0 - 0 - --- 26 39.53 Loss "BS,IP6" ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 401185LE female - QCXI89270 6 26704905 26758030 53126 Loss 1 0.869449 9 6640 chas 0 - 0 - 0 - --- 26 0 - - ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_no 400558BL female - AXJJ81139 6 26704905 26758030 53126 Loss 1 0.864355 9 6640 chas 0 - 0 - 0 - --- 26 39.53 Loss "BS,IP6" ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400432VA male - GHAL32977 6 26704905 26758030 53126 Loss 1 0.885966 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401734PG male - DMPI37172 6 26704905 26758030 53126 Loss 1 0.883144 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400287BP male - KJKF45195 6 26704905 26758030 53126 Loss 1 0.876866 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401132CH male - SFLX52247 6 26704905 26758030 53126 Loss 1 0.877182 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401640WJ male - UECJ73760 6 26704905 26758030 53126 Loss 1 0.885839 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401057SS male - SBTA40047 6 26704905 26758030 53126 Loss 1 0.883012 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401628GC female - APOV19283 6 26704905 26758030 53126 Loss 1 0.878399 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400203NA male - PCKY38343 6 26704905 26758030 53126 Loss 1 0.892933 9 6640 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "53126(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "53126(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 26 - 0 "53126(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400127MD male - NLDQ95097 17 735242 788342 53101 Gain 3 0.887784 54 1001 chas 55.43 Gain 57.06 Gain 0 - GainGain- 34 93.02 Gain "BS,IP6" "ChAS,IPN,NXS" 17p13.3 - NXN 1 NXN 1 - "53101#1%""Miller-Dieker syndrome (MDS)"":2545429" - "53101(5|Wang(2007),Pinto(2007),Redon(2006),Shaikh(2009))" "1102(11|Wang(2008),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Wheeler(2008),Mills(2006))" - 34 - 0 "53101(34|Wang(2007),Redon(2006),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Wang(2008),Pinto(2007),Shaikh(2009),Locke(2006),Simon-Sanchez(2007),Mills(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400091BS female "research_filter, clinical_filter" HXGR62358 19 45850377 45903461 53085 Gain 3 0.903102 64 842 chas 18.75 Gain 79.33 Gain 0 - GainGain- 25 85.31 Gain "BS,IP6" "ChAS,IPN,NXS" 19q13.32 - "ERCC2,KLC3,PPP1R13L" 3 "ERCC2,KLC3,PPP1R13L" 3 ERCC2 - - "41548(3|Wang(2007),McCarroll(2008),Shaikh(2009))" - - 25 - 0 "53085(13|Wang(2007),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male "research_filter, clinical_filter" GTDY31038 1 1619541 1672591 53051 Loss 1 0.889106 39 1396 chas 95.77 Loss 89.99 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "53051#1%""1p36 microdeletion syndrome"":5408761" - "53051(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "53051(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" SFLX52247 1 1619541 1672591 53051 Loss 1 0.903475 39 1396 chas 95.77 Loss 89.99 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "53051#1%""1p36 microdeletion syndrome"":5408761" - "53051(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 85 20 - 0 "53051(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" VSHC86133 Y 20038348 20091387 53040 Gain 2 0.867833 37 1473 chas 99.01 Gain 0 - 0 - Gain-- 27 NA NA NA "ChAS,IPN" Yq11.222 - - 0 - 0 - "53040#1%""AZFb+AZFc"":7829005" - - - 100 27 - 0 "53040(3|Locke(2006),Levy(2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400347VJ male research_filter PSUS84601 14 45173899 45226859 52961 Loss 1 0.939426 40 1357 chas 78.51 Loss 89.08 Loss 89.08 Loss LossLossLoss 35 84.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52961(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52961(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" RAZI40834 14 45173899 45226859 52961 Loss 1 0.90621 40 1357 chas 78.51 Loss 89.08 Loss 89.08 Loss LossLossLoss 35 78.48 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52961(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52961(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" YKLI59783 14 45173899 45226859 52961 Loss 1 0.926806 40 1357 chas 78.51 Loss 89.08 Loss 89.08 Loss LossLossLoss 35 78.48 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52961(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52961(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401919MD male "research_filter, clinical_filter" IAQN76409 14 45173899 45226859 52961 Loss 1 0.925811 40 1357 chas 78.51 Loss 89.08 Loss 89.08 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52961(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52961(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401820SD female "research_filter, clinical_filter" APBT44417 14 45173899 45226859 52961 Loss 1 0.906923 40 1357 chas 78.51 Loss 89.08 Loss 89.08 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52961(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52961(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400701MM female "research_filter, clinical_filter" SBQG40276 1 189669665 189722598 52934 Loss 1 0.911061 48 1126 chas 91.56 Loss 91.43 Loss 95.77 Loss LossLossLoss 41 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.1 - - 0 - 0 - - - "21415(5|McCarroll(2005),Wang(2007),Conrad(2005),Conrad(2009),Kidd(2008))" - 3 41 - 0 "52934(22|Conrad(2009),Wang(2007),Kidd(2010b),Itsara(2009),Conrad(2006),Durbin(2010),Kidd(2008),Cooper(2008),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400145BL female "research_filter, clinical_filter" YMNO36133 7 38295932 38348862 52931 Loss 1 0.875654 62 867 chas 0 - 27.65 Loss 0 - -Loss- 76 100 Loss "BS,IP6" "ChAS,NXS" 7p14.1 - TARP 1 TARP 1 - - - "52931(18|Sebat(2004),Ahn(2009),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),McKernan(2009),Bentley(2008),Pang(2010),Conrad(2009),Pinto(2007),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 750(1|Shaikh(2009)) 42 76 - 0 "52931(50|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_yes 401795SP male "research_filter, clinical_filter" JWQI23251 X 103260007 103312921 52915 Gain 2 0.930855 69 778 chas 85.71 Gain 0 - 0 - Gain-- 59 85.71 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52915(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52915(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 59 - 0 "52915(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400247CL male "research_filter, clinical_filter" IXLI37228 1 72759531 72812440 52910 Loss 1 0.924241 30 1824 chas 98.99 Loss 83.34 Loss 82.1 Loss LossLossLoss 53 79.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "52910(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 53 - 0 "52910(273|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" IWRE15730 4 34779032 34831805 52774 Loss 0 0.955515 23 2398 chas 71.21 Loss 85.56 Loss 78.37 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - "52774(24|Sebat(2004),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009))" - 3 46 - 0 "52774(179|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 402054BD male research_filter DHFF12670 17 34424711 34477480 52770 Gain 3 0.880142 65 824 chas 71.07 Gain 54.16 Gain 0 - GainGain- 65 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52770(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 24 65 - 0 "52770(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401252AE male "research_filter, clinical_filter" YAZD71442 4 68346 121107 52762 Gain 3 0.887947 138 385 chas 76.27 Gain 89.37 Gain 99.12 Gain GainGainGain 36 NA NA NA "ChAS,IPN,NXS,PTK" 4p16.3 - "ZNF718,ZNF595" 2 ZNF595 1 - "52762#1%""Wolf-Hirschhorn Syndrome"":2073670" - "52762(7|Wang(2007),Ahn(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 35 - 0 "52762(18|Wang(2007),Ahn(2009),Perry(2008),Wang(2008),Durbin(2010),Itsara(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" GHAL32977 14 45174100 45226859 52760 Loss 1 0.922985 39 1388 chas 78.81 Loss 89.42 Loss 89.42 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.2 - - 0 - 0 - - - "52760(6|de Smith(2007),Itsara(2009),Redon(2006),Shaikh(2009))" - - 34 - 0 "52760(8|Itsara(2009),Redon(2006),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" LFVX88346 4 34779032 34831780 52749 Loss 0 0.960775 22 2511 chas 71.25 Loss 85.6 Loss 72.35 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - "52749(24|Sebat(2004),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009))" - 3 46 - 0 "52749(179|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401694SG male research_filter OWWC21327 4 34779032 34831780 52749 Loss 0 0.948093 22 2511 chas 71.25 Loss 85.6 Loss 85.62 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - "52749(24|Sebat(2004),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009))" - 3 46 - 0 "52749(179|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 400547BS female research_filter PTGD86385 4 34779032 34831780 52749 Loss 0 0.962513 22 2511 chas 71.25 Loss 85.6 Loss 72.35 Loss LossLossLoss 47 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - "52749(24|Sebat(2004),Itsara(2009),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Kim(2009),Shaikh(2009))" - 3 46 - 0 "52749(179|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401262RR male research_filter XZZR64566 2 52738983 52791708 52726 Loss 0 0.89929 14 4055 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45378(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52726(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400996MC male - APOV19283 20 41240228 41292920 52693 Loss 1 0.916717 94 566 chas 99.15 Loss 99.56 Loss 99.56 Loss LossLossLoss 81 NA NA NA "ChAS,IPN,NXS,PTK" 20q12 - PTPRT 1 - 0 - - - "38139(8|Wang(2007),Pinto(2007),Redon(2006),Matsuzaki(2009),Shaikh(2009))" - - 81 - 0 "52693(17|Wang(2007),Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400203NA male "research_filter, clinical_filter" CWGV78054 8 126070284 126122970 52687 Loss 1 0.920008 74 721 chas 90.66 Loss 100 Loss 100 Loss LossLossLoss 53 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 8q24.13 - "NSMCE2,KIAA0196" 2 "NSMCE2,KIAA0196" 2 KIAA0196 - - 3186(1|Matsuzaki(2009)) - - 52 - 0 "52687(3|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400599CP female "research_filter, clinical_filter" KHBO80872 6 78720043 78772661 52619 Loss 1 0.863306 32 1697 chas 0 - 0 - 0 - --- 36 0 - - ChAS 6q14.1 - - 0 - 0 - - - - - - 36 - 0 "52619(2|Pinto(2011),Kidd(2008))" TRUE TRUE ipn_no algo_no affy6_no 400718PS male clinical_filter DOIH36842 3 98751155 98803715 52561 Loss 1 0.928666 45 1194 chas 100 Loss 100 Loss 99.75 Loss LossLossLoss 46 NA NA NA "ChAS,IPN,NXS,PTK" 3q12.1 - - 0 - 0 - - - - - - 46 - 0 "37390(5|Itsara(2009),Kidd(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" QUGL52736 5 177197942 177250458 52517 Gain 4 0.922232 13 4376 chas 0 - 100 Gain 0 - -Gain- 5 NA NA NA "ChAS,NXS" 5q35.3 - FAM153A 1 FAM153A 1 - "52517#1%""Sotos syndrome"":2326144" - "52517(10|Kidd(2008),McCarroll(2008),Altshuler(2010),Shaikh(2009),Conrad(2009))" - 100 5 - 0 "52517(33|Teague(2010),Conrad(2009),Altshuler(2010),Durbin(2010),Kidd(2008),McCarroll(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_yes NA 401780BB male research_filter OTAJ32230 X 41823704 41876220 52517 Loss 1 0.924773 24 2283 chas 99.82 Loss 0 - 0 - Loss-- 20 99.71 Loss "BS,GTC,IP6" "ChAS,IPN" Xp11.4 - - 0 - 0 - - - 52517(1|de Smith(2007)) - - 20 - 0 "52517(3|De(Smith_2007),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400785AK female research_filter WCXF39029 1 190988654 191041149 52496 Loss 1 0.915992 43 1249 chas 99.98 Loss 99.46 Loss 100 Loss LossLossLoss 29 91.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q31.2 - - 0 - 0 - - - - - - 29 - 0 "52496(3|Pinto(2011),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400788PV male "research_filter, clinical_filter" KIIK22313 6 78975106 79027502 52397 Loss 1 0.90934 18 3082 chas 100 Loss 0 - 0 - Loss-- 91 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "52397(73|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" 323(1|Conrad(2005)) - 91 - 0 "52397(817|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401496SL male research_filter ROAF64821 1 195823043 195875427 52385 Loss 1 0.916272 42 1277 chas 89.53 Loss 97.68 Loss 97.67 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 1q31.3 - - 0 - 0 - - - "50338(7|Itsara(2009),Pinto(2007),Jakobsson(2008),Perry(2008),Shaikh(2009))" - - 43 - 0 "52385(13|Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pinto(2007),Pinto(2011),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401870FB male "research_filter, clinical_filter" FPUC66465 10 67063701 67116082 52382 Loss 1 0.902332 44 1218 chas 76.89 Loss 80.15 Loss 94.49 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 10q21.3 - - 0 - 0 - - - "52382(2|Itsara(2009),Park(2010))" - - 37 - 0 "52382(7|Itsara(2009),Park(2010),Jakobsson(2008))" TRUE TRUE ipn_yes algo_yes NA 400827MM male "research_filter, clinical_filter" SNEF27582 2 52738983 52791331 52349 Loss 0 0.915367 13 4362 chas 81.3 Loss 74.72 Loss 74.69 Loss LossLossLoss 50 57.26 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401831TW male research_filter YITU99076 2 52738983 52791331 52349 Loss 1 0.897953 13 4362 chas 81.3 Loss 74.72 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401362ME male research_filter RWTQ90156 2 52738983 52791331 52349 Loss 1 0.903494 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400717BD male research_filter TBRP43796 2 52738983 52791331 52349 Loss 0 0.917077 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401894PD male research_filter NRTH35283 2 52738983 52791331 52349 Loss 1 0.895049 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401052BM female research_filter LTTD14271 2 52738983 52791331 52349 Loss 0 0.910404 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400050RL female research_filter FEZX98083 2 52738983 52791331 52349 Loss 0 0.917724 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400106PC male research_filter TQQL83388 2 52738983 52791331 52349 Loss 0 0.916222 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401365DJ male research_filter EGQB52790 2 52738983 52791331 52349 Loss 0 0.908975 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400277LM female research_filter UVWE33125 2 52738983 52791331 52349 Loss 0 0.907098 13 4362 chas 0 - 0 - 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401423BA male research_filter TTBC76525 2 52738983 52791331 52349 Loss 0 0.905882 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400371GA female research_filter EFCN47469 2 52738983 52791331 52349 Loss 1 0.90908 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400483DP male research_filter AQKH94698 2 52738983 52791331 52349 Loss 0 0.900762 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400955BE male research_filter NTSS59900 2 52738983 52791331 52349 Loss 0 0.91658 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400427SD male research_filter YZQJ34471 2 52738983 52791331 52349 Loss 0 0.894276 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 57.26 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400482MD male research_filter VVPL10652 2 52738983 52791331 52349 Loss 1 0.904296 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400871CM female research_filter BWCN37814 2 52738983 52791331 52349 Loss 0 0.90728 13 4362 chas 0 - 74.72 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401966SR male research_filter GDZR23108 2 52738983 52791331 52349 Loss 0 0.920002 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400375KA female research_filter IENJ56420 2 52738983 52791331 52349 Loss 1 0.899517 13 4362 chas 0 - 0 - 55.72 Loss #NAME? 50 NA NA NA "ChAS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401538NS female research_filter MGJR69521 2 52738983 52791331 52349 Loss 0 0.929241 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401251WN female research_filter ICCB48361 2 52738983 52791331 52349 Loss 0 0.915338 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401258PC female research_filter YZPM76095 2 52738983 52791331 52349 Loss 0 0.933507 13 4362 chas 0 - 74.72 Loss 74.69 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401841OB male research_filter JPDY25055 2 52738983 52791331 52349 Loss 1 0.88288 13 4362 chas 0 - 0 - 0 - --- 50 57.26 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 401102RD male - YCLA52151 2 52738983 52791331 52349 Loss 1 0.889828 13 4362 chas 0 - 0 - 0 - --- 50 57.26 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400173KP female - HDQN23240 2 52738983 52791331 52349 Loss 0 0.913832 13 4362 chas 0 - 0 - 0 - --- 50 57.26 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400136DM female - RIAA15120 2 52738983 52791331 52349 Loss 1 0.884407 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401315HK female - MKDG25249 2 52738983 52791331 52349 Loss 1 0.885591 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401420PJ male - GWDY85049 2 52738983 52791331 52349 Loss 0 0.90359 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401093VL female - QRNV11451 2 52738983 52791331 52349 Loss 1 0.895025 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401918CA male - UMLY49839 2 52738983 52791331 52349 Loss 1 0.893977 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401419SW male - TAVH54072 2 52738983 52791331 52349 Loss 0 0.904044 13 4362 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "45001(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "52349(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400948EV female - AMDW97336 11 49708362 49760676 52315 Loss 1 0.891781 60 886 chas 95.23 Loss 76.5 Loss 97.63 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - LOC440040 1 - 0 - - "20262(2|Kidd(2008),Tuzun(2005))" "52315(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 34 - 0 "52315(91|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401281BP male "research_filter, clinical_filter" KTQJ52506 11 49708362 49760676 52315 Loss 1 0.883307 60 886 chas 0 - 97.63 Loss 0 - -Loss- 35 NA NA NA "ChAS,NXS" 11p11.12 - LOC440040 1 - 0 - - "20262(2|Kidd(2008),Tuzun(2005))" "52315(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 34 - 0 "52315(91|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400218WK female "research_filter, clinical_filter" LNDH30137 2 15019061 15071367 52307 Loss 1 0.921259 50 1067 chas 87.03 Loss 93.53 Loss 93.53 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 2p24.3 - - 0 - 0 - - - - - - 49 - 0 "52307(4|Locke(2006),Durbin(2010),Shaikh(2009),Sharp(2005))" TRUE TRUE ipn_yes algo_yes NA 401808PS male "research_filter, clinical_filter" IDVO19613 1 176232597 176284901 52305 Gain 3 0.893381 36 1494 chas 69.76 Gain 76.3 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 1q25.2 - - 0 - 0 - - - 3042(1|Mills(2006)) - - 23 - 0 "52305(9|Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401434VN female research_filter RVIS81666 X 103260663 103312921 52259 Gain 2 0.93475 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" UCFR59681 X 103260663 103312921 52259 Gain 2 0.919907 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400319HT male "research_filter, clinical_filter" VPWL90389 X 103260663 103312921 52259 Gain 2 0.929925 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" RCQQ88896 X 103260663 103312921 52259 Gain 2 0.932793 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" OAZH14211 X 103260663 103312921 52259 Gain 2 0.926767 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400246MG male "research_filter, clinical_filter" PEZC72297 X 103260663 103312921 52259 Gain 2 0.925603 68 779 chas 84.1 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" WCSO50334 X 103260663 103312921 52259 Gain 2 0.941558 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400073HT male "research_filter, clinical_filter" OBAS32636 X 103260663 103312921 52259 Gain 3 0.891742 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 85.53 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400249BC female "research_filter, clinical_filter" VAON88685 X 103260663 103312921 52259 Gain 2 0.934007 68 779 chas 85.45 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401783BD male "research_filter, clinical_filter" NVMX58254 X 103260663 103312921 52259 Gain 3 0.892604 68 779 chas 85.53 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 402060PD female "research_filter, clinical_filter" IOGU88526 X 103260663 103312921 52259 Gain 2 0.934874 68 779 chas 85.45 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401623SN male "research_filter, clinical_filter" TRVK84587 X 103260663 103312921 52259 Gain 2 0.931993 68 779 chas 85.45 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52259(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52259(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 58 - 0 "52259(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401288LD male "research_filter, clinical_filter" TZSA84286 6 78969092 79021310 52219 Loss 1 0.895938 18 3071 chas 99.98 Loss 0 - 0 - Loss-- 80 NA NA NA "ChAS,IPN" 6q14.1 - - 0 - 0 - - - "52219(71|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" - - 80 - 0 "52219(815|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_yes algo_yes NA 401166WJ female research_filter RTCT86718 11 5883304 5935498 52195 Gain 3 0.908038 54 984 chas 99.98 Gain 97.46 Gain 0 - GainGain- 39 NA NA NA "ChAS,IPN,NXS" 11p15.4 - OR52E4 1 OR52E4 1 - - - "52195(27|Wang(2007),Young(2008),Redon(2006),Matsuzaki(2009),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" "971(2|Levy(2007),McKernan(2009))" 3 38 - 0 "52195(102|Conrad(2009),Wong(2007),Pinto(2007),Perry(2008),Kidd(2010b),Itsara(2009),Altshuler(2010),Alkan(2009),Durbin(2010),Kidd(2008),McCarroll(2008),Wang(2007),Park(2010),Pinto(2011),Jakobsson(2008),McKernan(2009),Young(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400201PK male "research_filter, clinical_filter" XNUA56302 11 49708487 49760676 52190 Loss 1 0.885274 59 899 chas 95.75 Loss 0 - 0 - Loss-- 34 95.47 Loss "BS,GTC,IP6" "ChAS,IPN" 11p11.12 - LOC440040 1 - 0 - - "20262(2|Kidd(2008),Tuzun(2005))" "52190(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 33 - 0 "52190(91|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400344DR_1 male "research_filter, clinical_filter" GDZR23108 14 22798952 22851141 52190 Loss 1 0.859194 64 828 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 14q11.2 - - 0 - 0 - - - "52190(8|Sebat(2004),Levy(2007),Park(2010),Wheeler(2008),Kim(2009),Zogopoulos(2007))" - - 25 - 0 "52190(32|Sebat(2004),Wong(2007),Durbin(2010),Pinto(2011),Park(2010),Wheeler(2008),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400375KA female clinical_filter UJRA83281 5 17602612 17654787 52176 Loss 1 0.899551 26 2087 chas 81.91 Loss 0 - 0 - Loss-- 20 NA NA NA "ChAS,IPN" 5p15.1 - - 0 - 0 - - - "52176(28|Wang(2007),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Bentley(2008),Pang(2010),Kidd(2008),Pinto(2007),Park(2010),Itsara(2009),Shaikh(2009),McCarroll(2008))" - 78 20 - 0 "52176(110|Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2011),Pinto(2007),Locke(2006),Shaikh(2009),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Perry(2008b),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" LETQ64470 17 34425363 34477480 52118 Gain 3 0.895404 64 827 chas 66.96 Gain 71.73 Gain 0 - GainGain- 64 77.43 Gain BS "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" YBMF74034 17 34425363 34477480 52118 Gain 4 0.960478 64 827 chas 70.39 Gain 77.84 Gain 76.87 Gain GainGainGain 64 77.45 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401806DL male "research_filter, clinical_filter" KWJN47187 17 34425363 34477480 52118 Gain 3 0.880716 64 827 chas 76.72 Gain 0 - 0 - Gain-- 64 70.28 Gain "BS,IP6" "ChAS,IPN" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" YWSA20061 17 34425363 34477480 52118 Gain 4 0.938495 64 827 chas 76.72 Gain 77.84 Gain 77.83 Gain GainGainGain 64 77.43 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" TRSR14168 17 34425363 34477480 52118 Gain 3 0.892879 64 827 chas 70.39 Gain 77.84 Gain 0 - GainGain- 64 77.43 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401908YM male "research_filter, clinical_filter" FXID76383 17 34425363 34477480 52118 Gain 3 0.892441 64 827 chas 70.39 Gain 53.95 Gain 0 - GainGain- 64 77.43 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401922MW male "research_filter, clinical_filter" TQFG68171 17 34425363 34477480 52118 Gain 4 0.937922 64 827 chas 70.39 Gain 77.84 Gain 77.83 Gain GainGainGain 64 77.45 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400265LK male "research_filter, clinical_filter" PEZC72297 17 34425363 34477480 52118 Gain 3 0.883731 64 827 chas 70.39 Gain 41.83 Gain 0 - GainGain- 64 77.43 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400298ME male "research_filter, clinical_filter" GZBA26596 17 34425363 34477480 52118 Gain 4 0.981846 64 827 chas 76.72 Gain 77.84 Gain 77.83 Gain GainGainGain 64 77.45 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400150SS female "research_filter, clinical_filter" GEZQ95890 17 34425363 34477480 52118 Gain 4 0.976801 64 827 chas 70.39 Gain 76.87 Gain 77.22 Gain GainGainGain 64 77.45 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401487FW male "research_filter, clinical_filter" PZCO50940 17 34425363 34477480 52118 Gain 3 0.886115 64 827 chas 70.39 Gain 76.87 Gain 0 - GainGain- 64 77.43 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" JUSU56143 17 34425363 34477480 52118 Gain 4 0.955557 64 827 chas 76.72 Gain 78.36 Gain 77.83 Gain GainGainGain 64 79.08 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400743LS female "research_filter, clinical_filter" RDPM47345 17 34425363 34477480 52118 Gain 3 0.893788 64 827 chas 70.39 Gain 71.05 Gain 0 - GainGain- 64 77.43 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400554WB male "research_filter, clinical_filter" IAEL45337 17 34425363 34477480 52118 Gain 3 0.885099 64 827 chas 76.72 Gain 0 - 0 - Gain-- 64 77.43 Gain "BS,IP6" "ChAS,IPN" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" EMKM20452 17 34425363 34477480 52118 Gain 3 0.880514 64 827 chas 71.96 Gain 77.84 Gain 0 - GainGain- 64 77.43 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" DWHI65488 17 34425363 34477480 52118 Gain 4 0.935727 64 827 chas 70.39 Gain 76.87 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400135DR male "research_filter, clinical_filter" COLF20670 17 34425363 34477480 52118 Gain 4 0.962825 64 827 chas 76.72 Gain 77.84 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401026AM female "research_filter, clinical_filter" AVAH45014 17 34425363 34477480 52118 Gain 4 0.922651 64 827 chas 70.39 Gain 78.36 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" LWHQ31793 17 34425363 34477480 52118 Gain 4 0.952875 64 827 chas 70.39 Gain 77.22 Gain 76.87 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" NVDU55912 17 34425363 34477480 52118 Gain 3 0.879708 64 827 chas 70.39 Gain 96.42 Gain 93.91 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401307VR male "research_filter, clinical_filter" JIVU24920 17 34425363 34477480 52118 Gain 3 0.888325 64 827 chas 58.24 Gain 76.87 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400168HC female "research_filter, clinical_filter" UIPG73190 17 34425363 34477480 52118 Gain 4 0.953939 64 827 chas 76.72 Gain 77.84 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401809FU female "research_filter, clinical_filter" OOYJ75103 17 34425363 34477480 52118 Gain 4 0.955488 64 827 chas 76.72 Gain 77.84 Gain 77.22 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401672FD female "research_filter, clinical_filter" YHQC23155 17 34425363 34477480 52118 Gain 3 0.878583 64 827 chas 58.24 Gain 58.63 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401906DT female "research_filter, clinical_filter" UEDI98118 17 34425363 34477480 52118 Gain 4 0.946482 64 827 chas 76.72 Gain 77.84 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400131CM female "research_filter, clinical_filter" KWBM98824 17 34425363 34477480 52118 Gain 3 0.89132 64 827 chas 58.24 Gain 54.35 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401212HJ female "research_filter, clinical_filter" QXHS37749 17 34425363 34477480 52118 Gain 3 0.882832 64 827 chas 71.96 Gain 77.84 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401943KA male "research_filter, clinical_filter" QDNW53844 17 34425363 34477480 52118 Gain 3 0.917554 64 827 chas 58.24 Gain 77.84 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" FUTH67903 17 34425363 34477480 52118 Gain 4 0.937158 64 827 chas 71.96 Gain 78.36 Gain 77.83 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401874DJ male "research_filter, clinical_filter" RNZZ40210 17 34425363 34477480 52118 Gain 3 0.885504 64 827 chas 71.96 Gain 71.05 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401940SJ male "research_filter, clinical_filter" FPUC66465 17 34425363 34477480 52118 Gain 4 0.929257 64 827 chas 71.96 Gain 77.84 Gain 77.22 Gain GainGainGain 64 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400827MM male "research_filter, clinical_filter" ROFY65487 17 34425363 34477480 52118 Gain 3 0.878452 64 827 chas 58.24 Gain 40.49 Gain 0 - GainGain- 64 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "52118(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 23 64 - 0 "52118(234|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400683EC female "research_filter, clinical_filter" FSQK31243 17 44224532 44276618 52087 Loss 1 0.866007 54 982 chas 100 Loss 0 - 0 - Loss-- 54 100 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 52087(1|Kidd(2008)) "52087(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 54 - 0 "52087(206|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400863SS female "research_filter, clinical_filter" ACWT82545 5 180378754 180430797 52044 Loss 1 0.978482 37 1445 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401477ST male "research_filter, clinical_filter" XUQQ42504 5 180378754 180430797 52044 Loss 1 0.95953 37 1445 chas 100 Loss 100 Loss 87.99 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401702GB male "research_filter, clinical_filter" PTGD86385 5 180378754 180430797 52044 Loss 0 0.979503 37 1445 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401262RR male "research_filter, clinical_filter" IZPX82976 5 180378754 180430797 52044 Gain 3 0.892667 37 1445 chas 100 Gain 74.82 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401693RC male research_filter QPLK48897 5 180378754 180430797 52044 Gain 3 0.912 37 1445 chas 100 Gain 71.32 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401730MS male research_filter CETD95374 5 180378754 180430797 52044 Gain 3 0.909253 37 1445 chas 100 Gain 88.05 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401331LJ female research_filter HXSU46589 5 180378754 180430797 52044 Gain 3 0.889404 37 1445 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401299ST female research_filter ZMDC73313 5 180378754 180430797 52044 Gain 3 0.893574 37 1445 chas 0 - 73.17 Gain 0 - -Gain- 18 75.61 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401165SB female research_filter ELXG87337 5 180378754 180430797 52044 Gain 3 0.888186 37 1445 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401634CH male research_filter WQLL63278 5 180378754 180430797 52044 Gain 3 0.907629 37 1445 chas 0 - 88.05 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400503HD male research_filter XDYS74119 5 180378754 180430797 52044 Gain 3 0.896113 37 1445 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401019MP female research_filter MECH38806 5 180378754 180430797 52044 Gain 3 0.912198 37 1445 chas 0 - 88.05 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400671PP male research_filter DLXG88049 5 180378754 180430797 52044 Gain 3 0.898 37 1445 chas 0 - 73.17 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52044(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52044(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400927BD male research_filter HGCG44121 7 38319296 38371334 52039 Loss 1 0.872489 81 650 chas 0 - 40.37 Loss 100 Loss #NAME? 100 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 7p14.1 - - 0 - 0 - - - "52039(18|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 100 - 0 "52039(37|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 400410CD male "research_filter, clinical_filter" PYXL51166 7 38319296 38371334 52039 Loss 1 0.871499 81 650 chas 0 - 0 - 0 - --- 100 76.21 Loss GTC ChAS 7p14.1 - - 0 - 0 - - - "52039(18|Sebat(2004),Ahn(2009),Redon(2006),Matsuzaki(2009),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 100 - 0 "52039(37|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 401146US female clinical_filter FCXX78522 5 180378754 180430789 52036 Loss 1 0.866607 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss BS "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401117GM male "research_filter, clinical_filter" LETQ64470 5 180378754 180430789 52036 Loss 1 0.90076 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss BS "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401812HG male "research_filter, clinical_filter" PYXL51166 5 180378754 180430789 52036 Loss 0 0.975213 36 1486 chas 100 Loss 88.06 Loss 86.53 Loss LossLossLoss 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401146US female "research_filter, clinical_filter" PYHX78792 5 180378754 180430789 52036 Loss 0 0.982015 36 1486 chas 100 Loss 88.06 Loss 88.05 Loss LossLossLoss 18 75.62 Loss "BS,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401799DP male "research_filter, clinical_filter" CAEK98371 5 180378754 180430789 52036 Loss 0 0.978792 36 1486 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400243CK male "research_filter, clinical_filter" CSHY74530 5 180378754 180430789 52036 Loss 1 0.974043 36 1486 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400148MS female "research_filter, clinical_filter" TFBW53379 5 180378754 180430789 52036 Loss 1 0.858115 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401087SF male "research_filter, clinical_filter" IXLI37228 5 180378754 180430789 52036 Loss 1 0.869177 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" UAZI16039 5 180378754 180430789 52036 Loss 1 0.868243 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss "BS,IP6" "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400625FT male "research_filter, clinical_filter" IAEL45337 5 180378754 180430789 52036 Loss 1 0.860502 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 75.62 Loss "BS,IP6" "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" THXY16685 5 180378754 180430789 52036 Loss 1 0.965775 36 1486 chas 100 Loss 100 Loss 98.48 Loss LossLossLoss 18 75.62 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400114GR female "research_filter, clinical_filter" JQGN11749 5 180378754 180430789 52036 Loss 1 0.862477 36 1486 chas 100 Loss 0 - 0 - Loss-- 18 NA NA NA "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400534ME male "research_filter, clinical_filter" WMCV84375 5 180378754 180430789 52036 Loss 0 0.9669 36 1486 chas 100 Loss 73.58 Loss 88.05 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401249TP female "research_filter, clinical_filter" NFPW24786 5 180378754 180430789 52036 Loss 0 0.984658 36 1486 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401432SB male "research_filter, clinical_filter" IBGK33359 5 180378754 180430789 52036 Loss 1 0.971691 36 1486 chas 100 Loss 100 Loss 98.48 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" ICZT95489 5 180378754 180430789 52036 Loss 1 0.973639 36 1486 chas 100 Loss 100 Loss 88.05 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401386WA male "research_filter, clinical_filter" YTCX24219 5 180378754 180430789 52036 Loss 1 0.960914 36 1486 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400502GS female "research_filter, clinical_filter" FSRW48279 5 180378754 180430789 52036 Loss 1 0.968017 36 1486 chas 100 Loss 100 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401385BB male "research_filter, clinical_filter" RGHO54100 5 180378754 180430789 52036 Loss 0 0.984694 36 1486 chas 100 Loss 88.06 Loss 100 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" OTMU34006 5 180378754 180430789 52036 Loss 1 0.981503 36 1486 chas 100 Loss 88.06 Loss 86.53 Loss LossLossLoss 18 NA NA NA "ChAS,IPN,NXS,PTK" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402038MR male "research_filter, clinical_filter" EMKM20452 5 180378754 180430789 52036 Gain 3 0.897082 36 1486 chas 100 Gain 74.83 Gain 0 - GainGain- 18 0 - - "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_no 400107MJ male research_filter VVPL10652 5 180378754 180430789 52036 Gain 3 0.887923 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400871CM female research_filter EDMQ40540 5 180378754 180430789 52036 Gain 3 0.891247 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401589HP male research_filter IUXY17884 5 180378754 180430789 52036 Gain 3 0.890379 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401238QR male research_filter IREV30826 5 180378754 180430789 52036 Gain 3 0.895825 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401413RG male research_filter VBTG63612 5 180378754 180430789 52036 Gain 3 0.890792 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401550SP female research_filter QWII30838 5 180378754 180430789 52036 Gain 3 0.906421 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 402061PI female research_filter YIUT48601 5 180378754 180430789 52036 Gain 3 0.91669 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401274PA female research_filter QVQY90814 5 180378754 180430789 52036 Gain 3 0.902506 36 1486 chas 100 Gain 99.84 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401311GL female research_filter MFZY15027 5 180378754 180430789 52036 Gain 3 0.912784 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401739BJ male research_filter JILG60414 5 180378754 180430789 52036 Gain 3 0.905442 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400278PD male research_filter SMGW17663 5 180378754 180430789 52036 Gain 3 0.894407 36 1486 chas 100 Gain 76.86 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400362TV female research_filter QKSF16477 5 180378754 180430789 52036 Gain 3 0.885602 36 1486 chas 100 Gain 24.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401749DJ male research_filter LMDJ78561 5 180378754 180430789 52036 Gain 3 0.911327 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401518VK female research_filter NQKM94057 5 180378754 180430789 52036 Gain 3 0.913884 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400917CG female research_filter KSNB36135 5 180378754 180430789 52036 Gain 3 0.905786 36 1486 chas 100 Gain 74.83 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401677MM female research_filter PRED73338 5 180378754 180430789 52036 Gain 3 0.902264 36 1486 chas 100 Gain 55.09 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401183HP female research_filter XNFN85306 5 180378754 180430789 52036 Gain 3 0.897035 36 1486 chas 100 Gain 53.83 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401797LS male research_filter QDNW53844 5 180378754 180430789 52036 Gain 4 0.921285 36 1486 chas 100 Gain 75.26 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400729HC female research_filter GDLU88739 5 180378754 180430789 52036 Gain 3 0.911436 36 1486 chas 100 Gain 74.83 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400268SY female research_filter IDVO19613 5 180378754 180430789 52036 Gain 4 0.917498 36 1486 chas 100 Gain 54.47 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401434VN female research_filter ZJPO23473 5 180378754 180430789 52036 Gain 4 0.921428 36 1486 chas 100 Gain 100 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401173AI male research_filter QYCK62831 5 180378754 180430789 52036 Gain 3 0.897817 36 1486 chas 100 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401556KR male research_filter TAVH54072 5 180378754 180430789 52036 Gain 3 0.904769 36 1486 chas 100 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400948EV female research_filter FUTH67903 5 180378754 180430789 52036 Gain 3 0.892969 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401874DJ male research_filter MVJH83535 5 180378754 180430789 52036 Gain 3 0.905052 36 1486 chas 100 Gain 100 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401771OS male research_filter LUVG84905 5 180378754 180430789 52036 Gain 3 0.901319 36 1486 chas 100 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401664SD male research_filter XSKZ13040 5 180378754 180430789 52036 Gain 4 0.921909 36 1486 chas 100 Gain 74.72 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401824MM female research_filter ZMNN35179 5 180378754 180430789 52036 Gain 3 0.906698 36 1486 chas 97.22 Gain 69.82 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400430KV male research_filter NLWZ33045 5 180378754 180430789 52036 Gain 3 0.910352 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401993HM female research_filter XZZR64566 5 180378754 180430789 52036 Gain 3 0.905747 36 1486 chas 100 Gain 71.66 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400996MC male research_filter GNMX63810 5 180378754 180430789 52036 Gain 3 0.90134 36 1486 chas 100 Gain 71.66 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401067BD male research_filter TDCE32526 5 180378754 180430789 52036 Gain 3 0.913605 36 1486 chas 100 Gain 73.02 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400583HS male research_filter SFLX52247 5 180378754 180430789 52036 Gain 3 0.91484 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401640WJ male research_filter MWKR26526 5 180378754 180430789 52036 Gain 4 0.924417 36 1486 chas 100 Gain 54.47 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400225CJ male research_filter RBTV68848 5 180378754 180430789 52036 Gain 3 0.919786 36 1486 chas 100 Gain 61.51 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401182OC male research_filter XROV61149 5 180378754 180430789 52036 Gain 4 0.91966 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401480PG male research_filter ENVJ37912 5 180378754 180430789 52036 Gain 3 0.905335 36 1486 chas 97.22 Gain 73.41 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400532MH male research_filter AEUU95723 5 180378754 180430789 52036 Gain 3 0.901237 36 1486 chas 100 Gain 46.16 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 402073LQ male research_filter FGIX67905 5 180378754 180430789 52036 Gain 3 0.905722 36 1486 chas 73.23 Gain 54.31 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401391PJ male research_filter HAAE15834 5 180378754 180430789 52036 Gain 3 0.906197 36 1486 chas 100 Gain 73.58 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401899MB male research_filter ZKED26020 5 180378754 180430789 52036 Gain 3 0.910368 36 1486 chas 100 Gain 32.28 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401652HL female research_filter GDZR23108 5 180378754 180430789 52036 Gain 3 0.914247 36 1486 chas 73.11 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400375KA female research_filter ABWI37104 5 180378754 180430789 52036 Gain 3 0.887235 36 1486 chas 100 Gain 72.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401200BD male research_filter TNZB91328 5 180378754 180430789 52036 Gain 3 0.892895 36 1486 chas 100 Gain 61.51 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400911GA female research_filter LOAP92341 5 180378754 180430789 52036 Gain 3 0.902353 36 1486 chas 100 Gain 54.22 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401554VN male research_filter TRLD69151 5 180378754 180430789 52036 Gain 3 0.908797 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401514BA male research_filter AMDW97336 5 180378754 180430789 52036 Gain 3 0.905868 36 1486 chas 100 Gain 74.29 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401281BP male research_filter JTMA20495 5 180378754 180430789 52036 Gain 3 0.916711 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 402042BJ male research_filter FCFF79727 5 180378754 180430789 52036 Gain 3 0.92212 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401384BP male research_filter UEII10946 5 180378754 180430789 52036 Gain 3 0.892303 36 1486 chas 100 Gain 74.29 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401913GT male research_filter LCWB88916 5 180378754 180430789 52036 Gain 3 0.895683 36 1486 chas 100 Gain 74.29 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401725MR male research_filter KAYE11117 5 180378754 180430789 52036 Gain 3 0.899872 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400686BM male research_filter DVRF47676 5 180378754 180430789 52036 Gain 3 0.902291 36 1486 chas 100 Gain 74.29 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401847RK male research_filter FVSF76751 5 180378754 180430789 52036 Gain 3 0.89307 36 1486 chas 100 Gain 74.72 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401869BG male research_filter AGBJ55549 5 180378754 180430789 52036 Gain 3 0.902896 36 1486 chas 100 Gain 68.9 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 402016HZ male research_filter VUUO47049 5 180378754 180430789 52036 Gain 3 0.901689 36 1486 chas 100 Gain 0 - 0 - Gain-- 18 NA NA NA "ChAS,IPN" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400533BB female research_filter STES59258 5 180378754 180430789 52036 Gain 3 0.903518 36 1486 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401616WP female research_filter FPLE23103 5 180378754 180430789 52036 Gain 3 0.897548 36 1486 chas 100 Gain 76.86 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400337HG male research_filter RFXX95002 5 180378754 180430789 52036 Gain 3 0.914028 36 1486 chas 100 Gain 71.34 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401773AM male research_filter ELWV13238 5 180378754 180430789 52036 Gain 4 0.926902 36 1486 chas 100 Gain 73.58 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401013GJ male research_filter CBBY76424 5 180378754 180430789 52036 Gain 4 0.922009 36 1486 chas 100 Gain 71.66 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401927SK female research_filter IJLN67055 5 180378754 180430789 52036 Gain 3 0.901686 36 1486 chas 73.11 Gain 71.66 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400982BS female research_filter BTJZ41884 5 180378754 180430789 52036 Gain 4 0.925319 36 1486 chas 100 Gain 39.57 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400068PW female research_filter GUYS21436 5 180378754 180430789 52036 Gain 4 0.923988 36 1486 chas 100 Gain 74.72 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400582WS female research_filter UCQK65306 5 180378754 180430789 52036 Gain 4 0.926031 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401196CR male research_filter JPEZ22320 5 180378754 180430789 52036 Gain 4 0.926781 36 1486 chas 100 Gain 71.34 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401149VA male research_filter TUOI10912 5 180378754 180430789 52036 Gain 4 0.923165 36 1486 chas 100 Gain 54.47 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401792KR male research_filter YPPO84595 5 180378754 180430789 52036 Gain 4 0.921708 36 1486 chas 100 Gain 73.18 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401857VG male research_filter RWTQ90156 5 180378754 180430789 52036 Gain 3 0.888799 36 1486 chas 0 - 73.41 Gain 0 - -Gain- 18 75.36 Gain GTC "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400717BD male research_filter XTPE89033 5 180378754 180430789 52036 Gain 3 0.892174 36 1486 chas 0 - 59.99 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400817MB male research_filter GYNG28087 5 180378754 180430789 52036 Gain 3 0.900129 36 1486 chas 0 - 74.29 Gain 0 - -Gain- 18 75.36 Gain GTC "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400520FM female research_filter OYDK45967 5 180378754 180430789 52036 Gain 3 0.895149 36 1486 chas 0 - 73.58 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401162TM female research_filter KWJN47187 5 180378754 180430789 52036 Gain 3 0.897939 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400821FE female research_filter SBZX25020 5 180378754 180430789 52036 Gain 3 0.908384 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400312CR female research_filter ORXH15927 5 180378754 180430789 52036 Gain 3 0.905075 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400266BA female research_filter BQFC38547 5 180378754 180430789 52036 Gain 3 0.901746 36 1486 chas 0 - 73.58 Gain 0 - -Gain- 18 68.63 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400238BB female research_filter ALWU32623 5 180378754 180430789 52036 Gain 3 0.889197 36 1486 chas 0 - 98.48 Gain 0 - -Gain- 18 68.63 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400595CP female research_filter RVIS81666 5 180378754 180430789 52036 Gain 3 0.897849 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401852SK male research_filter YKWT45889 5 180378754 180430789 52036 Gain 3 0.906937 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 99.77 Gain GTC "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400094RS male research_filter VLMR80827 5 180378754 180430789 52036 Gain 3 0.891274 36 1486 chas 0 - 53.83 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401630MK female research_filter WZBZ52169 5 180378754 180430789 52036 Gain 3 0.897383 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401619BT female research_filter HXWA61262 5 180378754 180430789 52036 Gain 3 0.902747 36 1486 chas 0 - 86.54 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401438HT male research_filter VPWL90389 5 180378754 180430789 52036 Gain 3 0.895489 36 1486 chas 0 - 67.38 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401912HD male research_filter VZJA70154 5 180378754 180430789 52036 Gain 3 0.900235 36 1486 chas 0 - 73.58 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401427CB male research_filter UVWE33125 5 180378754 180430789 52036 Gain 3 0.898857 36 1486 chas 0 - 69.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401423BA male research_filter YCLA52151 5 180378754 180430789 52036 Gain 3 0.895916 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400173KP female research_filter KLEB18411 5 180378754 180430789 52036 Gain 3 0.894408 36 1486 chas 0 - 73.53 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400300SD female research_filter TLUK35377 5 180378754 180430789 52036 Gain 3 0.895778 36 1486 chas 0 - 87.9 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400053LE female research_filter KGCF91244 5 180378754 180430789 52036 Gain 3 0.893198 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 75.36 Gain GTC "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401112LG_1 female research_filter KLXQ40405 5 180378754 180430789 52036 Gain 3 0.901499 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400051MR_1 male research_filter RVAL88696 5 180378754 180430789 52036 Gain 3 0.909839 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400353ML male research_filter ZVRQ32621 5 180378754 180430789 52036 Gain 3 0.891635 36 1486 chas 0 - 68.9 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401176BD male research_filter GQXG36971 5 180378754 180430789 52036 Gain 3 0.908811 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401930GD male research_filter SVIC15912 5 180378754 180430789 52036 Gain 3 0.90184 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401113MJ female research_filter PAGW82790 5 180378754 180430789 52036 Gain 3 0.896344 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400245SJ female research_filter UFJQ31039 5 180378754 180430789 52036 Gain 3 0.887322 36 1486 chas 0 - 75.81 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401551MB male research_filter GNXG93257 5 180378754 180430789 52036 Gain 3 0.895845 36 1486 chas 0 - 61.51 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400108BJ female research_filter GRYY36123 5 180378754 180430789 52036 Gain 3 0.894633 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 40031BA female research_filter NBJX82400 5 180378754 180430789 52036 Gain 3 0.899847 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400014SL female research_filter VABQ19693 5 180378754 180430789 52036 Gain 3 0.896431 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400493KH male research_filter LFNU24334 5 180378754 180430789 52036 Gain 3 0.892679 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400471YS male research_filter KEHV72339 5 180378754 180430789 52036 Gain 3 0.90308 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400733SW male research_filter SUUF34898 5 180378754 180430789 52036 Gain 3 0.903998 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400669LD male research_filter FISX28606 5 180378754 180430789 52036 Gain 3 0.899926 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400677HD male research_filter MGYM61346 5 180378754 180430789 52036 Gain 3 0.895384 36 1486 chas 0 - 73.18 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400974PS female research_filter UYAI76550 5 180378754 180430789 52036 Gain 3 0.889146 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400792RE female research_filter YMTT86375 5 180378754 180430789 52036 Gain 3 0.905671 36 1486 chas 0 - 100 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400797ST male research_filter XGGI83581 5 180378754 180430789 52036 Gain 3 0.90274 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400486LS female research_filter INUW24322 5 180378754 180430789 52036 Gain 3 0.897983 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400110MD male research_filter HOIC14625 5 180378754 180430789 52036 Gain 3 0.914088 36 1486 chas 0 - 54.47 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400619MP male research_filter DGQM75197 5 180378754 180430789 52036 Gain 3 0.916504 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 75.62 Gain IP6 "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400518MS female research_filter EJHE40652 5 180378754 180430789 52036 Gain 3 0.907152 36 1486 chas 0 - 54.47 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 400654YW male research_filter MAAD53838 5 180378754 180430789 52036 Gain 3 0.893446 36 1486 chas 0 - 73.58 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401517PR male research_filter WSSG80726 5 180378754 180430789 52036 Gain 3 0.897871 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400515ZG male research_filter BYSK29073 5 180378754 180430789 52036 Gain 3 0.891462 36 1486 chas 0 - 71.34 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400620MT male research_filter PXVB29564 5 180378754 180430789 52036 Gain 3 0.912788 36 1486 chas 0 - 54.47 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400818BL female research_filter NFNX93095 5 180378754 180430789 52036 Gain 3 0.889344 36 1486 chas 0 - 99.96 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401318AV female research_filter GBQV50998 5 180378754 180430789 52036 Gain 3 0.893553 36 1486 chas 0 - 88.06 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401818PC male research_filter KMMD77027 5 180378754 180430789 52036 Gain 3 0.894101 36 1486 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 5q35.3 - BTNL3 1 BTNL3 1 - - - "52036(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52036(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400783MJ male - DZVA59681 6 29837648 29889669 52022 Gain 3 0.869246 25 2167 chas 0 - 0 - 0 - --- 26 NA NA NA ChAS 6p22.1 - HLA-H 1 HLA-H 1 - - - "52022(48|Itsara(2009),Ahn(2009),Korbel(2007),Redon(2006),Conrad(2005),Perry(2008),Gusev(2009),de Smith(2007),Levy(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),Ju(2010),Shaikh(2009),McCarroll(2008))" 319(1|Bentley(2008)) 41 26 - 0 "52022(311|Ju(2010),Korbel(2007),Redon(2006),Teague(2010),Wang(2008),Campbell(2011),Bentley(2008),Pinto(2007),Pinto(2011),Shaikh(2009),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Cooper(2008),Perry(2008b),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" FALSE TRUE ipn_no algo_no NA 400606HW male - OZXZ40778 6 162693563 162745581 52019 Gain 3 0.885202 60 881 chas 53.42 Gain 62.3 Gain 0 - GainGain- 49 NA NA NA "ChAS,IPN,NXS" 6q26 - PARK2 1 - 0 PARK2 - - "52019(24|Wang(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Altshuler(2010),Pang(2010),Pinto(2007),Simon-Sanchez(2007),Park(2010),Redon(2006),McCarroll(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" 800(4|Matsuzaki(2009)) - 48 PARK2#asd_candidate 1 "52019(40|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Pang(2010),Wilson(2010),Altshuler(2010),Shaikh(2009),Park(2010),Redon(2006),Kim(2009),Simon-Sanchez(2007),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400123WN male "research_filter, clinical_filter" NFIQ53983 5 180378776 180430789 52014 Gain 3 0.907776 35 1529 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52014(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52014(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401719RL female research_filter RLVK87046 5 180378776 180430789 52014 Gain 3 0.909455 35 1529 chas 100 Gain 87.94 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52014(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52014(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401563TK male research_filter WXKO33327 5 180378776 180430789 52014 Gain 4 0.92856 35 1529 chas 100 Gain 88.06 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52014(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52014(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400496BL female research_filter VPFM57168 5 180378776 180430789 52014 Gain 3 0.895687 35 1529 chas 0 - 87.94 Gain 0 - -Gain- 18 NA NA NA "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "52014(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "52014(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401696CG male research_filter GYNG28087 X 103260915 103312921 52007 Gain 3 0.902423 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 85.46 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400520FM female "research_filter, clinical_filter" PSUS84601 X 103260915 103312921 52007 Gain 3 0.905286 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 85.46 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401021SC female "research_filter, clinical_filter" KWJN47187 X 103260915 103312921 52007 Gain 3 0.887555 66 800 chas 80.99 Gain 0 - 0 - Gain-- 56 85.46 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400821FE female "research_filter, clinical_filter" GYLD25146 X 103260915 103312921 52007 Gain 3 0.905053 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 85.43 Gain "BS,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400132HN female "research_filter, clinical_filter" GPXE42967 X 103260915 103312921 52007 Gain 3 0.902485 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400006DK female "research_filter, clinical_filter" QTRF59074 X 103260915 103312921 52007 Gain 3 0.911525 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 85.46 Gain "BS,GTC" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400881GS female "research_filter, clinical_filter" ZRKC95930 X 103260915 103312921 52007 Gain 3 0.878759 66 800 chas 85.36 Gain 0 - 0 - Gain-- 56 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" PUOR77387 X 103260915 103312921 52007 Gain 3 0.914253 66 800 chas 85.46 Gain 0 - 0 - Gain-- 56 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "52007(6|Pang(2010),Kidd(2008),Tuzun(2005))" "52007(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 56 - 0 "52007(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401603HH female "research_filter, clinical_filter" WPZH96755 10 47047586 47099529 51944 Gain 3 0.874541 76 692 chas 0 - 12.18 Gain 0 - -Gain- 69 0 - - "ChAS,NXS" 10q11.22 - "LOC643650,PPYR1" 2 "LOC643650,PPYR1" 2 - - "15687(7|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009),Tuzun(2005))" "51944(33|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Gusev(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" "1393(7|Ahn(2009),Bentley(2008),Pang(2010),Park(2010),Wheeler(2008),Mills(2006))" - 69 - 0 "51944(220|Teague(2010),Korbel(2007),Redon(2006),Wang(2007),Bentley(2008),Pang(2010),Pinto(2007),Pinto(2011),Shaikh(2009),Kidd(2008),Wilson(2010),Mills(2006),Conrad(2009),Ahn(2009),Jakobsson(2008),McKernan(2009),Tuzun(2005),Sebat(2004),Wong(2007),Perry(2008),Durbin(2010),Park(2010),Ju(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400072GR male "research_filter, clinical_filter" PYJA98100 5 180378875 180430789 51915 Gain 3 0.905505 34 1573 chas 100 Gain 88.03 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401981GF female research_filter DQOB10223 5 180378875 180430789 51915 Gain 3 0.902392 34 1573 chas 100 Gain 88.03 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401567BD male research_filter NBLH72263 5 180378875 180430789 51915 Gain 3 0.897476 34 1573 chas 100 Gain 88.03 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401532LJ female research_filter SSWV37655 5 180378875 180430789 51915 Gain 4 0.91903 34 1573 chas 100 Gain 86.74 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401706BJ female research_filter CVUT48167 5 180378875 180430789 51915 Gain 4 0.921809 34 1573 chas 100 Gain 73.12 Gain 0 - GainGain- 18 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401898DS male research_filter GEZQ95890 5 180378875 180430789 51915 Gain 3 0.895192 34 1573 chas 0 - 88.03 Gain 0 - -Gain- 18 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401487FW male research_filter PYWH93436 5 180378875 180430789 51915 Gain 3 0.91462 34 1573 chas 0 - 0 - 0 - --- 18 0 - - ChAS 5q35.3 - BTNL3 1 BTNL3 1 - - - "51915(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 18 - 0 "51915(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400270BD female - EGVC41637 6 78969403 79021310 51908 Gain 4 0.89294 17 3244 chas 0 - 100 Gain 0 - -Gain- 79 NA NA NA "ChAS,NXS" 6q14.1 - - 0 - 0 - - - "51908(71|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2005),Jakobsson(2008),Ju(2010),Kim(2009),Kidd(2008),Shaikh(2009),McCarroll(2008))" - - 79 - 0 "51908(815|Teague(2010),Redon(2006),Ju(2010),Perry(2008b),Pinto(2007),Pinto(2011),Shaikh(2009),Wang(2007),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Sebat(2004),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" FALSE TRUE ipn_no algo_yes NA 401939GD male research_filter BYSK29073 17 3505568 3557452 51885 Loss 1 0.920636 138 378 chas 100 Loss 100 Loss 100 Loss LossLossLoss 35 NA NA NA "ChAS,IPN,NXS,PTK" 17p13.2 - "CTNS,TRPV1,SHPK" 3 "CTNS,TRPV1,SHPK" 3 CTNS - - "51885(3|Itsara(2009),Pang(2010),Shaikh(2009))" - - 34 - 0 "51885(14|Wong(2007),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400620MT male "research_filter, clinical_filter" NKFT59098 18 65846227 65898107 51881 Loss 1 0.9181 32 1673 chas 71.52 Loss 80.23 Loss 0 - LossLoss- 42 65.47 Loss "BS,GTC" "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400012CJ female "research_filter, clinical_filter" RCQQ88896 18 65846227 65898107 51881 Loss 1 0.926841 32 1673 chas 60.63 Loss 80.23 Loss 0 - LossLoss- 42 65.47 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400315DA_1 male "research_filter, clinical_filter" OSRU53198 18 65846227 65898107 51881 Loss 1 0.920144 32 1673 chas 60.63 Loss 65.79 Loss 80.23 Loss LossLossLoss 42 89.92 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400854SG male "research_filter, clinical_filter" YMTT86375 18 65846227 65898107 51881 Loss 1 0.916246 32 1673 chas 60.63 Loss 80.23 Loss 0 - LossLoss- 42 65.47 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400797ST male "research_filter, clinical_filter" OPKR54750 18 65846227 65898107 51881 Loss 1 0.910964 32 1673 chas 71.52 Loss 80.23 Loss 0 - LossLoss- 42 NA NA NA "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401822TL female "research_filter, clinical_filter" DWHR77544 18 65846227 65898107 51881 Loss 1 0.909389 32 1673 chas 60.63 Loss 80.23 Loss 0 - LossLoss- 42 NA NA NA "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401468RL male "research_filter, clinical_filter" XQAG43010 18 65846227 65898107 51881 Loss 1 0.907823 32 1673 chas 60.63 Loss 80.23 Loss 0 - LossLoss- 42 NA NA NA "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" LMDJ78561 18 65846227 65898107 51881 Loss 1 0.901356 32 1673 chas 60.63 Loss 80.23 Loss 80.23 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401518VK female "research_filter, clinical_filter" EJVQ96131 18 65846227 65898107 51881 Loss 1 0.920036 32 1673 chas 60.63 Loss 80.23 Loss 0 - LossLoss- 42 NA NA NA "ChAS,IPN,NXS" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400738WM female "research_filter, clinical_filter" WTDT99871 18 65846227 65898107 51881 Loss 1 0.922527 32 1673 chas 60.63 Loss 80.23 Loss 94.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 18q22.1 - - 0 - 0 - - - "45901(3|Itsara(2009),Shaikh(2009))" - - 42 - 0 "51881(16|Itsara(2009),Wilson(2010),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401505WI male "research_filter, clinical_filter" ZKDO15212 X 134854916 134906734 51819 Gain 3 0.891954 116 450 chas 61.37 Gain 0 - 0 - Gain-- 38 100 Gain "BS,IP6" "ChAS,IPN" Xq26.3 - "CT45A1,CT45A3,CT45A2,CT45A4" 4 "CT45A1,CT45A3,CT45A2,CT45A4" 4 - - 44686(1|Kidd(2008)) "51819(16|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Pang(2010),Kidd(2008),Tuzun(2005),Shaikh(2009))" - 98 38 - 0 "51819(33|Conrad(2009),Redon(2006),Perry(2008),Sharp(2005),Campbell(2011),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400361HC female "research_filter, clinical_filter" HXGR62358 17 3505670 3557452 51783 Loss 1 0.915334 136 383 chas 92.37 Loss 99.9 Loss 100 Loss LossLossLoss 34 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17p13.2 - "CTNS,TRPV1,SHPK" 3 "CTNS,TRPV1,SHPK" 3 CTNS - - "51783(3|Itsara(2009),Pang(2010),Shaikh(2009))" - - 33 - 0 "51783(14|Wong(2007),Itsara(2009),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2011),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male "research_filter, clinical_filter" WHSN55625 19 12506251 12558014 51764 Gain 3 0.90924 42 1262 chas 32.05 Gain 48.27 Gain 0 - GainGain- 40 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 19p13.2 - "ZNF799,ZNF443" 2 "ZNF799,ZNF443" 2 - - - "51764(9|Wang(2007),Redon(2006),Matsuzaki(2009),Conrad(2009),McKernan(2009),Altshuler(2010),McCarroll(2008),Shaikh(2009))" "390(4|Levy(2007),Wheeler(2008),Bentley(2008))" 54 40 - 0 "48828(35|Conrad(2009),Redon(2006),Wang(2007),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Wilson(2010),Altshuler(2010),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401354KM male research_filter MKDG25249 12 2129357 2181104 51748 Gain 3 0.870835 88 594 chas 0 - 8.04 Gain 0 - -Gain- 41 NA NA NA "ChAS,NXS" 12p13.33 - CACNA1C 1 CACNA1C 1 CACNA1C - - "44710(3|Park(2010),Conrad(2009))" - - 41 CACNA1C#asd_known 1 "51748(12|Conrad(2009),Pinto(2011),Durbin(2010),Kidd(2008),Park(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401420PJ male "research_filter, clinical_filter" GWRR97762 X 103261175 103312921 51747 Gain 3 0.895627 64 821 chas 85.31 Gain 0 - 0 - Gain-- 55 99.74 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51747(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51747(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 55 - 0 "51747(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400130HA female "research_filter, clinical_filter" ZSEZ81141 X 103261175 103312921 51747 Gain 3 0.882629 64 821 chas 85.31 Gain 0 - 0 - Gain-- 55 85.38 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51747(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51747(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 55 - 0 "51747(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" SVIC15912 X 103261175 103312921 51747 Gain 4 0.938932 64 821 chas 85.31 Gain 0 - 0 - Gain-- 55 85.38 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51747(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51747(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 55 - 0 "51747(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401113MJ female "research_filter, clinical_filter" TLUK35377 2 183519704 183571442 51739 Loss 1 0.931662 36 1478 chas 100 Loss 100 Loss 100 Loss LossLossLoss 33 99.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2q32.1 - - 0 - 0 - - - "43686(3|Pinto(2007),Redon(2006),Matsuzaki(2009))" 642(1|Conrad(2009)) - 33 - 0 "51739(6|Itsara(2009),Kidd(2008),Pinto(2007),Redon(2006),Conrad(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400053LE female "research_filter, clinical_filter" DLXG88049 13 67714843 67766520 51678 Gain 3 0.91295 104 501 chas 80.02 Gain 90.14 Gain 90.16 Gain GainGainGain 30 NA NA NA "ChAS,IPN,NXS,PTK" 13q21.32 - PCDH9 1 - 0 - - - - - - 30 PCDH9#asd_candidate 1 "2355(2|Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" NXEA90195 1 214645398 214696995 51598 Loss 1 0.929202 50 1053 chas 87.36 Loss 93.67 Loss 93.68 Loss LossLossLoss 42 94.77 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1q41 - PTPN14 1 - 0 PTPN14 - - - - 2 42 - 0 "33115(2|Itsara(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" SMGW17663 1 170560249 170611843 51595 Loss 1 0.89529 32 1664 chas 99.84 Loss 90.62 Loss 0 - LossLoss- 33 NA NA NA "ChAS,IPN,NXS" 1q24.2 - - 0 - 0 - - - 1041(1|McKernan(2009)) - - 33 - 0 "2141(4|McKernan(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400362TV female "research_filter, clinical_filter" TQQL83388 3 5388544 5440087 51544 Loss 1 0.903811 40 1321 chas 88.89 Loss 94.05 Loss 94.05 Loss LossLossLoss 40 92.63 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "49437(2|Itsara(2009),Korbel(2007))" "945(2|Conrad(2009),Shaikh(2009))" - 40 - 0 "49437(10|Itsara(2009),Conrad(2009),Korbel(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401365DJ male "research_filter, clinical_filter" JKGU55742 3 5388544 5440087 51544 Loss 1 0.936771 40 1321 chas 92.63 Loss 94.05 Loss 94.05 Loss LossLossLoss 40 NA NA NA "ChAS,IPN,NXS,PTK" 3p26.1 - - 0 - 0 - - - "49437(2|Itsara(2009),Korbel(2007))" "945(2|Conrad(2009),Shaikh(2009))" - 40 - 0 "49437(10|Itsara(2009),Conrad(2009),Korbel(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400880TM male "research_filter, clinical_filter" MWRB65708 X 103261397 103312921 51525 Gain 3 0.896371 63 831 chas 85.24 Gain 0 - 0 - Gain-- 53 85.3 Gain "BS,GTC,IP6" "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51525(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51525(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 17 53 - 0 "51525(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400267GD female "research_filter, clinical_filter" MJBR37071 2 52738983 52790493 51511 Loss 1 0.90748 12 4682 chas 82.62 Loss 75.93 Loss 75.91 Loss LossLossLoss 50 NA NA NA "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400570RW male research_filter AEJP39672 2 52738983 52790493 51511 Loss 1 0.902313 12 4682 chas 82.62 Loss 75.93 Loss 0 - LossLoss- 50 NA NA NA "ChAS,IPN,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401234MB male research_filter XMAJ27378 2 52738983 52790493 51511 Loss 1 0.922909 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401100SJ female research_filter LAYE10086 2 52738983 52790493 51511 Loss 0 0.906389 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400141CC female research_filter TCSA61368 2 52738983 52790493 51511 Loss 0 0.923178 12 4682 chas 0 - 75.93 Loss 75.91 Loss #NAME? 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400360SM male research_filter KGCF91244 2 52738983 52790493 51511 Loss 0 0.915318 12 4682 chas 0 - 75.93 Loss 75.91 Loss #NAME? 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401112LG_1 female research_filter LDEW86321 2 52738983 52790493 51511 Loss 0 0.903999 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401786WD male research_filter EMKM20452 2 52738983 52790493 51511 Loss 1 0.906602 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 58.19 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400107MJ male research_filter WSSG80726 2 52738983 52790493 51511 Loss 1 0.901019 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400515ZG male research_filter OGJP80646 2 52738983 52790493 51511 Loss 0 0.909921 12 4682 chas 0 - 75.93 Loss 75.91 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400704LC female research_filter IFUE20361 2 52738983 52790493 51511 Loss 0 0.917554 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401834CB female research_filter IWRE15730 2 52738983 52790493 51511 Loss 1 0.90502 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 402054BD male research_filter NDHJ32269 2 52738983 52790493 51511 Loss 0 0.910042 12 4682 chas 0 - 75.93 Loss 75.91 Loss #NAME? 50 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 402008MC female research_filter QSVT75164 2 52738983 52790493 51511 Loss 1 0.91547 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401791FG male research_filter PCSL59179 2 52738983 52790493 51511 Loss 0 0.90979 12 4682 chas 0 - 75.93 Loss 0 - -Loss- 50 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401879HJ male research_filter GQXG36971 2 52738983 52790493 51511 Loss 0 0.90662 12 4682 chas 0 - 0 - 0 - --- 50 58.19 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 401930GD male - LYLG55293 2 52738983 52790493 51511 Loss 1 0.894425 12 4682 chas 0 - 0 - 0 - --- 50 58.19 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 4000657TM female - CUZZ77277 2 52738983 52790493 51511 Loss 1 0.910911 12 4682 chas 0 - 0 - 0 - --- 50 58.19 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400105BB female - BDAF16773 2 52738983 52790493 51511 Loss 1 0.905276 12 4682 chas 0 - 0 - 0 - --- 50 58.19 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400811SK female - ZRKC95930 2 52738983 52790493 51511 Loss 1 0.907863 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400242TP female - OCVA11195 2 52738983 52790493 51511 Loss 1 0.918043 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401358VP male - GTDY31038 2 52738983 52790493 51511 Loss 1 0.913864 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401860TJ male - DOJD65755 2 52738983 52790493 51511 Loss 1 0.905597 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 402023EC female - SRQH11774 2 52738983 52790493 51511 Loss 1 0.904247 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401410BJ male - EIAZ51546 2 52738983 52790493 51511 Loss 1 0.900082 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401261HD male - VUFI80076 2 52738983 52790493 51511 Loss 1 0.888933 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 402001SR male - XQAG43010 2 52738983 52790493 51511 Loss 1 0.901921 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400953MR female - DJYF53115 2 52738983 52790493 51511 Loss 1 0.908846 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401184MM male - SBJN54268 2 52738983 52790493 51511 Loss 1 0.904398 12 4682 chas 0 - 0 - 0 - --- 50 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "44163(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 50 - 0 "51511(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400343BD female - RAZI40834 12 73448362 73499867 51506 Loss 1 0.923553 28 1907 chas 94.55 Loss 87.09 Loss 0 - LossLoss- 27 94.55 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 12q21.1 - - 0 - 0 - - - - - - 27 - 0 "51506(4|Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male "research_filter, clinical_filter" UBHC61833 7 38319296 38370792 51497 Loss 1 0.892382 80 651 chas 0 - 63.38 Loss 100 Loss #NAME? 99 100 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" JORC32909 7 38319296 38370792 51497 Gain 3 0.885015 80 651 chas 0 - 91.53 Gain 0 - -Gain- 99 NA NA NA "ChAS,NXS" 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401086MD male "research_filter, clinical_filter" DUXB26784 7 38319296 38370792 51497 Loss 1 0.880086 80 651 chas 0 - 39.5 Loss 0 - -Loss- 99 NA NA NA "ChAS,NXS" 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes NA 401519SA female "research_filter, clinical_filter" IXLI37228 7 38319296 38370792 51497 Loss 1 0.855738 80 651 chas 0 - 0 - 0 - --- 99 100 Loss IP6 ChAS 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no affy6_yes 400241CP male clinical_filter AOYC46859 7 38319296 38370792 51497 Gain 3 0.87565 80 651 chas 0 - 0 - 0 - --- 99 NA NA NA ChAS 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400307HW male clinical_filter VSHC86133 7 38319296 38370792 51497 Loss 1 0.867887 80 651 chas 0 - 0 - 0 - --- 99 NA NA NA ChAS 7p14.1 - - 0 - 0 - - - "51497(17|Sebat(2004),Ahn(2009),Redon(2006),Wang(2007),de Smith(2007),Levy(2007),Pang(2010),Park(2010),Pinto(2007),McCarroll(2005),Wheeler(2008),Kim(2009),Shaikh(2009),Zogopoulos(2007))" "899(2|McKernan(2009),Shaikh(2009))" - 99 - 0 "51497(36|Wang(2007),Ahn(2009),Wong(2007),Redon(2006),Sebat(2004),Itsara(2009),Levy(2007),McKernan(2009),Durbin(2010),McCarroll(2006),Pang(2010),Park(2010),Pinto(2007),Pinto(2011),Wheeler(2008),Kim(2009),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 400347VJ male clinical_filter BTMS28214 16 13432354 13483836 51483 Gain 3 0.91 36 1470 chas 55.08 Gain 100 Gain 0 - GainGain- 49 NA NA NA "ChAS,IPN,NXS" 16p13.12 - - 0 - 0 - - - - - - 49 - 0 "26173(3|Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400526DR male research_filter TABQ91013 17 44225231 44276618 51388 Loss 1 0.854786 52 1007 chas 100 Loss 0 - 0 - Loss-- 52 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51388(1|Kidd(2008)) "51388(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 52 - 0 "51388(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400934LA female "research_filter, clinical_filter" VVPL10652 17 44225231 44276618 51388 Loss 1 0.86059 52 1007 chas 100 Loss 0 - 0 - Loss-- 52 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51388(1|Kidd(2008)) "51388(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 52 - 0 "51388(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400871CM female "research_filter, clinical_filter" RDBP35321 6 125534210 125585577 51368 Gain 3 0.904658 42 1252 chas 91.32 Gain 95.05 Gain 0 - GainGain- 30 NA NA NA "ChAS,IPN,NXS" 6q22.31 - TPD52L1 1 TPD52L1 1 - - - - - - 30 - 0 47054(1|Wong(2007)) FALSE TRUE ipn_yes algo_yes NA 400773GS male research_filter NBLH72263 2 81513229 81564594 51366 Loss 1 0.894805 22 2446 chas 89.56 Loss 68.5 Loss 0 - LossLoss- 20 NA NA NA "ChAS,IPN,NXS" 2p12 - - 0 - 0 - - - 31895(1|Shaikh(2009)) - - 20 - 0 "32433(2|Durbin(2010),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401532LJ female research_filter ZQHJ50767 6 26704905 26756176 51272 Loss 1 0.864484 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss BS ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400888MS female - OTAJ32230 6 26704905 26756176 51272 Loss 1 0.851302 8 7324 chas 0 - 0 - 0 - --- 25 37.36 Loss "BS,GTC,IP6" ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400785AK female - LTTD14271 6 26704905 26756176 51272 Loss 1 0.87038 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss BS ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400050RL female - RVAL88696 6 26704905 26756176 51272 Loss 1 0.877245 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss BS ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400353ML male - QMSH77829 6 26704905 26756176 51272 Loss 1 0.882016 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss BS ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400038CK male - GWRR97762 6 26704905 26756176 51272 Loss 1 0.87187 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss BS ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400130HA female - QTRF59074 6 26704905 26756176 51272 Loss 1 0.870363 8 7324 chas 0 - 0 - 0 - --- 25 37.34 Loss "BS,IP6" ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no affy6_yes 400881GS female - ABMS89106 6 26704905 26756176 51272 Loss 1 0.887989 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401674DD male - RDBP35321 6 26704905 26756176 51272 Loss 1 0.868413 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400773GS male - ZVZK64221 6 26704905 26756176 51272 Loss 1 0.878332 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401911FL male - BXCR78538 6 26704905 26756176 51272 Loss 1 0.887112 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401050GS female - KSUK43841 6 26704905 26756176 51272 Loss 1 0.871637 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401762SD male - XHZD61935 6 26704905 26756176 51272 Loss 1 0.870057 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401785MJ female - XSKZ13040 6 26704905 26756176 51272 Loss 1 0.875642 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 401824MM female - BTMS28214 6 26704905 26756176 51272 Loss 1 0.878044 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400526DR male - EJVQ96131 6 26704905 26756176 51272 Loss 1 0.875062 8 7324 chas 0 - 0 - 0 - --- 25 NA NA NA ChAS 6p22.2 - - 0 - 0 - - "51272(4|Kidd(2008),Ahn(2009),McKernan(2009),Tuzun(2005))" "51272(22|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Bentley(2008),Wang(2008),McCarroll(2008),Park(2010),Wheeler(2008),Kim(2009))" - 100 25 - 0 "51272(81|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Kidd(2010b),Wang(2008),Sharp(2005),Durbin(2010),Bentley(2008),Korbel(2007),Kidd(2008),McCarroll(2008),Tuzun(2005),Park(2010),Pinto(2011),McKernan(2009),Kim(2009),De(Smith_2007),Campbell(2011))" FALSE TRUE ipn_no algo_no NA 400738WM female - WMQY51169 2 52738983 52790246 51264 Loss 1 0.904319 11 5126 chas 0 - 0 - 0 - --- 49 58.47 Loss "BS,GTC,IP6" ChAS 2p16.3 - - 0 - 0 - - - "43916(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51264(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_yes 400364SS male - QKZI23426 2 52738983 52790246 51264 Loss 1 0.906907 11 5126 chas 0 - 0 - 0 - --- 49 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "43916(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51264(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400943DV female - FSRW48279 2 52738983 52790246 51264 Loss 1 0.923664 11 5126 chas 0 - 0 - 0 - --- 49 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "43916(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51264(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401385BB male - MLXC26947 2 52738983 52790246 51264 Loss 1 0.896587 11 5126 chas 0 - 0 - 0 - --- 49 NA NA NA ChAS 2p16.3 - - 0 - 0 - - - "43916(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51264(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401977ES male - SRQH11774 6 170868227 170919482 51256 Loss 1 0.917713 65 800 chas 90.74 Loss 95.22 Loss 100 Loss LossLossLoss 31 NA NA NA "ChAS,IPN,NXS,PTK" 6q27 - "TBP,PDCD2" 2 "TBP,PDCD2" 2 TBP - - 8381(1|Matsuzaki(2009)) - 31 31 - 0 "51256(6|Wong(2007),Redon(2006),Durbin(2010),Perry(2008b))" TRUE TRUE ipn_yes algo_yes NA 401410BJ male "research_filter, clinical_filter" WZBZ52169 12 31355861 31407111 51251 Gain 3 0.905688 53 985 chas 99.98 Gain 100 Gain 0 - GainGain- 61 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401619BT female "research_filter, clinical_filter" JFSR33951 12 31355861 31407111 51251 Gain 3 0.911664 53 985 chas 99.98 Gain 100 Gain 0 - GainGain- 61 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400444MM female "research_filter, clinical_filter" EUQI28257 12 31355861 31407111 51251 Gain 3 0.909131 53 985 chas 99.98 Gain 100 Gain 0 - GainGain- 61 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400920MK female "research_filter, clinical_filter" MAAD53838 12 31355861 31407111 51251 Gain 3 0.910396 53 985 chas 99.98 Gain 100 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401517PR male "research_filter, clinical_filter" GHAL32977 12 31355861 31407111 51251 Gain 3 0.893019 53 985 chas 99.98 Gain 99.99 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401734PG male "research_filter, clinical_filter" PDTM24300 12 31355861 31407111 51251 Gain 3 0.898185 53 985 chas 74.77 Gain 76.05 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401036WS female "research_filter, clinical_filter" GNZH35610 12 31355861 31407111 51251 Gain 3 0.904353 53 985 chas 91.35 Gain 100 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402029KJ male "research_filter, clinical_filter" VIXQ67410 12 31355861 31407111 51251 Gain 3 0.896491 53 985 chas 91.35 Gain 100 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51251(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 60 - 0 "51251(98|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" EHLK43437 17 34426245 34477480 51236 Gain 4 0.928278 63 826 chas 71.6 Gain 78.55 Gain 78.55 Gain GainGainGain 62 78.76 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401192MJ male "research_filter, clinical_filter" KRGM31190 17 34426245 34477480 51236 Gain 4 0.946276 63 826 chas 71.6 Gain 78.55 Gain 78.55 Gain GainGainGain 62 78.78 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" CUZZ77277 17 34426245 34477480 51236 Gain 3 0.884427 63 826 chas 78.04 Gain 60.59 Gain 0 - GainGain- 62 78.76 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" EJHE40652 17 34426245 34477480 51236 Gain 4 0.930127 63 826 chas 71.6 Gain 79.18 Gain 98.07 Gain GainGainGain 62 78.76 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400654YW male "research_filter, clinical_filter" TPDE39419 17 34426245 34477480 51236 Gain 3 0.887402 63 826 chas 71.6 Gain 75.62 Gain 0 - GainGain- 62 NA NA NA "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401369GR male "research_filter, clinical_filter" XIWN71249 17 34426245 34477480 51236 Gain 3 0.879063 63 826 chas 59.25 Gain 0 - 0 - Gain-- 62 NA NA NA "ChAS,IPN" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401935TM female "research_filter, clinical_filter" FSLR52955 17 34426245 34477480 51236 Gain 4 0.969087 63 826 chas 73.2 Gain 79.18 Gain 79.17 Gain GainGainGain 62 NA NA NA "ChAS,IPN,NXS,PTK" 17q12 - CCL4 1 CCL4 1 - - - "51236(39|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 22 62 - 0 "51236(233|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" VRGJ17464 X 103260663 103311893 51231 Gain 2 0.942452 67 776 chas 87.24 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51231(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51231(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 15 58 - 0 "51231(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401914PR male "research_filter, clinical_filter" LHMB79045 X 103260663 103311893 51231 Gain 2 0.950176 67 776 chas 87.17 Gain 0 - 0 - Gain-- 58 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "51231(6|Pang(2010),Kidd(2008),Tuzun(2005))" "51231(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 15 58 - 0 "51231(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401285HN male "research_filter, clinical_filter" ZMDC73313 17 44225440 44276618 51179 Loss 1 0.857645 48 1088 chas 100 Loss 0 - 0 - Loss-- 51 100 Loss "GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401165SB female "research_filter, clinical_filter" LNYN65073 17 44225440 44276618 51179 Loss 1 0.858994 48 1088 chas 100 Loss 0 - 0 - Loss-- 51 100 Loss "BS,GTC,IP6" "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401924ST male "research_filter, clinical_filter" UOXQ52793 17 44225440 44276618 51179 Loss 1 0.855363 48 1088 chas 100 Loss 0 - 0 - Loss-- 51 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400791GC female "research_filter, clinical_filter" DZNQ84721 17 44225440 44276618 51179 Loss 1 0.860483 48 1088 chas 100 Loss 0 - 0 - Loss-- 51 NA NA NA "ChAS,IPN" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" TRUE TRUE ipn_yes algo_yes NA 400866RR male "research_filter, clinical_filter" WCSO50334 17 44225440 44276618 51179 Gain 3 0.89873 48 1088 chas 54.42 Gain 42.78 Gain 0 - GainGain- 51 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400073HT male research_filter KAAS48951 17 44225440 44276618 51179 Gain 3 0.902099 48 1088 chas 100 Gain 100 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes NA 401504RJ male research_filter LOOD16085 17 44225440 44276618 51179 Gain 3 0.905817 48 1088 chas 0 - 54.23 Gain 0 - -Gain- 51 NA NA NA "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 51179(1|Kidd(2008)) "51179(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "51179(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes NA 400376SJ female research_filter ZMNN35179 2 76541035 76592194 51160 Loss 1 0.91324 44 1189 chas 82.36 Loss 90.44 Loss 90.45 Loss LossLossLoss 45 NA NA NA "ChAS,IPN,NXS,PTK" 2p12 - - 0 - 0 - - - "43750(2|Shaikh(2009),Perry(2008))" "455(4|Wang(2008),Pang(2010),Levy(2007),Ahn(2009))" - 45 - 0 "51160(22|Ahn(2009),Redon(2006),Perry(2008),Wang(2008),Levy(2007),Durbin(2010),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400430KV male "research_filter, clinical_filter" XOPW74186 2 52738983 52790140 51158 Loss 0 0.931687 10 5684 chas 83.19 Loss 76.46 Loss 76.43 Loss LossLossLoss 49 58.59 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400897MD male research_filter MDAA91863 2 52738983 52790140 51158 Loss 0 0.941494 10 5684 chas 83.19 Loss 76.46 Loss 76.43 Loss LossLossLoss 49 58.59 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400425SL male research_filter KIAD94479 2 52738983 52790140 51158 Loss 0 0.942566 10 5684 chas 0 - 76.46 Loss 76.43 Loss #NAME? 49 58.59 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400359OR female research_filter GTRU40344 2 52738983 52790140 51158 Loss 0 0.937406 10 5684 chas 0 - 76.46 Loss 76.43 Loss #NAME? 49 58.59 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400134WK_1 male research_filter ZRZC68152 2 52738983 52790140 51158 Loss 0 0.928022 10 5684 chas 0 - 76.46 Loss 76.43 Loss #NAME? 49 58.59 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400155CW male research_filter QRLG88085 2 52738983 52790140 51158 Loss 0 0.930234 10 5684 chas 0 - 76.46 Loss 0 - -Loss- 49 58.59 Loss "BS,GTC,IP6" "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400759FV female research_filter IAQN76409 2 52738983 52790140 51158 Loss 0 0.944032 10 5684 chas 0 - 76.46 Loss 76.43 Loss #NAME? 49 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401820SD female research_filter JKGU55742 2 52738983 52790140 51158 Loss 0 0.926859 10 5684 chas 0 - 76.46 Loss 0 - -Loss- 49 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400880TM male research_filter AEUU95723 2 52738983 52790140 51158 Loss 0 0.939383 10 5684 chas 0 - 76.46 Loss 0 - -Loss- 49 NA NA NA "ChAS,NXS" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 402073LQ male research_filter AGBJ55549 2 52738983 52790140 51158 Loss 0 0.943245 10 5684 chas 0 - 76.46 Loss 76.43 Loss #NAME? 49 NA NA NA "ChAS,NXS,PTK" 2p16.3 - - 0 - 0 - - - "43810(19|Conrad(2009),Korbel(2007),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Wang(2008),Kidd(2008),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Kim(2009))" - - 49 - 0 "51158(141|Teague(2010),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Wang(2008),Campbell(2011),Altshuler(2010),Durbin(2010),McCarroll(2006),Kidd(2008),Korbel(2007),Cooper(2008),Park(2010),Pinto(2011),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 402016HZ male research_filter SDOC11846 2 32991382 33042516 51135 Gain 3 0.906515 68 763 chas 93.94 Gain 96.95 Gain 0 - GainGain- 37 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 2p22.3 - TTC27 1 TTC27 1 - - - "51135(5|Itsara(2009),McKernan(2009),Pinto(2007),Simon-Sanchez(2007))" - - 37 - 0 "51135(9|Itsara(2009),McKernan(2009),Wong(2007),Shaikh(2009),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400325BE male "research_filter, clinical_filter" GDLU88739 7 33518717 33569823 51107 Loss 1 0.904454 56 929 chas 83.28 Loss 79.1 Loss 91.67 Loss LossLossLoss 31 NA NA NA "ChAS,IPN,NXS,PTK" 7p14.3 - BBS9 1 BBS9 1 BBS9 - - - - - 31 - 0 "51107(3|Korbel(2007),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400268SY female "research_filter, clinical_filter" JKIG25467 1 207697757 207748854 51098 Gain 3 0.888727 40 1310 chas 0 - 89.85 Gain 0 - -Gain- 11 0 - - "ChAS,NXS" 1q32.2 - CR1 1 CR1 1 CR1 - - "51098(21|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005),Park(2010))" - 100 11 - 0 "51098(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Alkan(2009),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Tuzun(2005),Park(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400645KM male research_filter KEHV72339 Y 28372277 28423361 51085 Gain 2 0.847929 98 526 chas 49.37 Gain 0 - 0 - Gain-- 31 0 - - "ChAS,IPN" Yq11.23 - - 0 - 0 - - - 51085(1|McCarroll(2008)) - 100 31 - 0 "51085(6|Locke(2006),McCarroll(2008),Durbin(2010),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400733SW male "research_filter, clinical_filter" RPZL61223 17 41745139 41796222 51084 Loss 1 0.921207 52 1001 chas 88.41 Loss 100 Loss 100 Loss LossLossLoss 34 NA NA NA "ChAS,IPN,NXS,PTK" 17q21.31 - - 0 - 0 - - - - - - 33 - 0 - TRUE TRUE ipn_yes algo_yes NA 401673DM male "research_filter, clinical_filter" EIZV81962 2 80364173 80415242 51070 Loss 1 0.934461 74 699 chas 99.85 Loss 99.95 Loss 100 Loss LossLossLoss 54 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 2p12 - CTNNA2 1 - 0 - - - 51070(1|Gusev(2009)) - 6 54 - 0 "51070(4|Pinto(2011),Gusev(2009),Redon(2006),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400937OR female "research_filter, clinical_filter" GUWW37548 12 31356049 31407111 51063 Gain 3 0.910798 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401195PN male "research_filter, clinical_filter" NRTH35283 12 31356049 31407111 51063 Gain 3 0.900977 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401052BM female "research_filter, clinical_filter" GKVG35266 12 31356049 31407111 51063 Gain 3 0.891778 52 1001 chas 100 Gain 74.45 Gain 0 - GainGain- 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400248JO female "research_filter, clinical_filter" EGQB52790 12 31356049 31407111 51063 Gain 3 0.912312 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" FNMA81925 12 31356049 31407111 51063 Gain 3 0.916515 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 91.35 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400171BJ male "research_filter, clinical_filter" KRGM31190 12 31356049 31407111 51063 Gain 3 0.904445 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 91.35 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" VABQ19693 12 31356049 31407111 51063 Gain 4 0.945932 52 1001 chas 100 Gain 100 Gain 100 Gain GainGainGain 60 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400493KH male "research_filter, clinical_filter" BDAF16773 12 31356049 31407111 51063 Gain 3 0.891435 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 100 Gain "BS,GTC" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400811SK female "research_filter, clinical_filter" UBHC61833 12 31356049 31407111 51063 Gain 3 0.904647 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 100 Gain "BS,GTC" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400768MN female "research_filter, clinical_filter" MECH38806 12 31356049 31407111 51063 Gain 3 0.893557 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400671PP male "research_filter, clinical_filter" KMMD77027 12 31356049 31407111 51063 Gain 3 0.899455 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400783MJ male "research_filter, clinical_filter" QUIW42968 12 31356049 31407111 51063 Gain 3 0.917314 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400926LJ female "research_filter, clinical_filter" NJBJ54022 12 31356049 31407111 51063 Gain 3 0.912224 52 1001 chas 100 Gain 75.96 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401066MM female "research_filter, clinical_filter" COLF20670 12 31356049 31407111 51063 Gain 3 0.913558 52 1001 chas 74.7 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401026AM female "research_filter, clinical_filter" RFAX69878 12 31356049 31407111 51063 Gain 3 0.90807 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401586RS male "research_filter, clinical_filter" ZCOM63077 12 31356049 31407111 51063 Gain 3 0.896835 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401936BA male "research_filter, clinical_filter" DOUQ66820 12 31356049 31407111 51063 Gain 3 0.901887 52 1001 chas 100 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" LWHQ31793 12 31356049 31407111 51063 Gain 3 0.891865 52 1001 chas 68.22 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" FSGH36026 12 31356049 31407111 51063 Gain 3 0.901386 52 1001 chas 100 Gain 75.96 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" CVYW15790 12 31356049 31407111 51063 Gain 3 0.898907 52 1001 chas 74.7 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401552BK female "research_filter, clinical_filter" EIKI77114 12 31356049 31407111 51063 Gain 3 0.892965 52 1001 chas 74.7 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401221LD female "research_filter, clinical_filter" BWEV96807 12 31356049 31407111 51063 Gain 3 0.900887 52 1001 chas 90.03 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 402012RR male "research_filter, clinical_filter" MKDG25249 12 31356049 31407111 51063 Gain 4 0.928526 52 1001 chas 91.34 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401420PJ male "research_filter, clinical_filter" OAGJ33866 12 31356049 31407111 51063 Gain 3 0.899643 52 1001 chas 91.34 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" JORC32909 12 31356049 31407111 51063 Gain 3 0.899965 52 1001 chas 91.34 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401086MD male "research_filter, clinical_filter" NGFJ29672 12 31356049 31407111 51063 Gain 3 0.904346 52 1001 chas 74.7 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400269DA female "research_filter, clinical_filter" BNYR92388 12 31356049 31407111 51063 Gain 3 0.908238 52 1001 chas 74.7 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401587RC female "research_filter, clinical_filter" SURU67526 12 31356049 31407111 51063 Gain 3 0.898279 52 1001 chas 74.7 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400675HC female "research_filter, clinical_filter" XHZD61935 12 31356049 31407111 51063 Gain 3 0.904783 52 1001 chas 74.7 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401785MJ female "research_filter, clinical_filter" VGND49817 12 31356049 31407111 51063 Gain 3 0.901227 52 1001 chas 91.34 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401735LE male "research_filter, clinical_filter" ZWJR15881 12 31356049 31407111 51063 Gain 3 0.912463 52 1001 chas 91.34 Gain 100 Gain 100 Gain GainGainGain 60 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" MFZZ13533 12 31356049 31407111 51063 Gain 3 0.909497 52 1001 chas 91.34 Gain 100 Gain 0 - GainGain- 60 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "51063(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 59 - 0 "51063(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400164SS male "research_filter, clinical_filter" IAEL45337 X 6449753 6500811 51059 Gain 3 0.916928 100 515 chas 89.4 Gain 0 - 0 - Gain-- 46 100 Gain "BS,GTC,IP6" "ChAS,IPN" Xp22.31 - VCX3A 1 VCX3A 1 - "51059#1%""Steroid sulphatase deficiency (STS)"":1725741" - "51059(16|Wang(2007),Redon(2006),Matsuzaki(2009),de Smith(2007),Pinto(2007),Shaikh(2009),Tuzun(2005),Simon-Sanchez(2007))" 253(1|Bentley(2008)) 12 46 - 0 "51059(16|Teague(2010),Redon(2006),Wang(2007),Durbin(2010),Bentley(2008),Kidd(2008),Pinto(2007),Tuzun(2005),De(Smith_2007),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400424LN female "research_filter, clinical_filter" RLVK87046 2 130817326 130868380 51055 Loss 1 0.893702 19 2836 chas 0 - 40.08 Loss 0 - -Loss- 12 NA NA NA "ChAS,NXS" 2q21.1 - POTEF 1 POTEF 1 - - - "51055(11|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),Pinto(2007),McCarroll(2008))" - 100 12 - 0 "51055(33|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),McCarroll(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_yes NA 401563TK male research_filter NKHQ61532 13 58143486 58194523 51038 Gain 3 0.889555 36 1458 chas 91.34 Gain 92.03 Gain 0 - GainGain- 24 99.78 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 13q21.1 - - 0 - 0 - - - - - - 24 - 0 "51038(4|Wong(2007),Jakobsson(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400588BE female research_filter RPWI18802 13 58143486 58194523 51038 Gain 3 0.904045 36 1458 chas 91.04 Gain 100 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 13q21.1 - - 0 - 0 - - - - - - 24 - 0 "51038(4|Wong(2007),Jakobsson(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401580CA male research_filter QEPL68818 13 58143486 58194523 51038 Gain 3 0.898205 36 1458 chas 91.04 Gain 100 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 13q21.1 - - 0 - 0 - - - - - - 24 - 0 "51038(4|Wong(2007),Jakobsson(2008),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 402028BD male research_filter YZQJ34471 4 161952214 162003219 51006 Gain 3 0.901711 33 1593 chas 99.97 Gain 100 Gain 0 - GainGain- 43 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "51006(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "51006(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400482MD male research_filter YMWQ49708 X 7383909 7434896 50988 Loss 0 0.948614 92 560 chas 100 Loss 0 - 0 - Loss-- 43 NA NA NA "ChAS,IPN" Xp22.31 - - 0 - 0 - "50988#1%""Steroid sulphatase deficiency (STS)"":1725741" - "50988(6|Wang(2007),Redon(2006),Pinto(2007),McCarroll(2005),Simon-Sanchez(2007),Zogopoulos(2007))" - - 43 - 0 "50988(8|Wang(2007),Redon(2006),Durbin(2010),Pinto(2007),McCarroll(2006),Simon-Sanchez(2007))" TRUE TRUE ipn_yes algo_yes NA 401403TD male "research_filter, clinical_filter" XUEP99389 12 31356131 31407111 50981 Gain 3 0.893799 51 1019 chas 100 Gain 100 Gain 0 - GainGain- 59 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401033DJ male "research_filter, clinical_filter" ZSEZ81141 12 31356131 31407111 50981 Gain 3 0.901374 51 1019 chas 100 Gain 100 Gain 0 - GainGain- 59 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400240HJ female "research_filter, clinical_filter" JQGN11749 12 31356131 31407111 50981 Gain 3 0.904031 51 1019 chas 74.34 Gain 74.41 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400534ME male "research_filter, clinical_filter" IBGK33359 12 31356131 31407111 50981 Gain 3 0.904408 51 1019 chas 90.18 Gain 100 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401503MJ male "research_filter, clinical_filter" QDNW53844 12 31356131 31407111 50981 Gain 3 0.895435 51 1019 chas 73.09 Gain 99.77 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400729HC female "research_filter, clinical_filter" IDVO19613 12 31356131 31407111 50981 Gain 3 0.894602 51 1019 chas 73.09 Gain 75.92 Gain 0 - GainGain- 59 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50981(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50981(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401434VN female "research_filter, clinical_filter" XBDZ94110 22 17279115 17330095 50981 Loss 1 0.922282 64 809 chas 100 Loss 96.04 Loss 98.75 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 22q11.1 - "HSFY1P1,XKR3" 2 "HSFY1P1,XKR3" 2 - "50981#1%""Cat-Eye Syndrome (Type I)"":18591860" - "50981(8|Conrad(2009),Jakobsson(2008),Itsara(2009),Pinto(2007),Kim(2009),Shaikh(2009),Zogopoulos(2007))" - 10 51 - 0 "50981(17|Conrad(2009),Wong(2007),Jakobsson(2008),Itsara(2009),Durbin(2010),Kim(2009),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400649PS male "research_filter, clinical_filter" BRIY29802 X 103260915 103311893 50979 Gain 3 0.886678 65 796 chas 87.18 Gain 0 - 0 - Gain-- 56 NA NA NA "ChAS,IPN" Xq22.2 - "H2BFWT,MIR1256,H2BFM" 3 "H2BFWT,H2BFM" 2 - - "50979(6|Pang(2010),Kidd(2008),Tuzun(2005))" "50979(5|de Smith(2007),Conrad(2009),Redon(2006),Shaikh(2009))" 1249(4|de Smith(2007)) 15 56 - 0 "50979(19|Conrad(2009),Redon(2006),Kidd(2010b),Durbin(2010),Pang(2010),Kidd(2008),Tuzun(2005),Locke(2006),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401717LP female "research_filter, clinical_filter" IFQR85921 15 24300341 24351317 50977 Loss 1 0.913282 58 894 chas 99.36 Loss 90.61 Loss 99.28 Loss LossLossLoss 39 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 15q11.2 - - 0 - 0 - "50977#4%""Prader-Willi Syndrome (Type 2)"":4798797,""Prader-Willi syndrome (Type 1)"":5680555,""Angelman syndrome (Type 2)"":4798797,""Angelman syndrome (Type 1)"":5680555" - "50977(14|Conrad(2009),Jakobsson(2008),Perry(2008),de Smith(2007),Itsara(2009),Pinto(2007),Redon(2006),Zogopoulos(2007))" "371(3|Levy(2007),Ahn(2009),Wheeler(2008))" 37 39 - 0 "50977(19|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Perry(2008b),Pinto(2011),Jakobsson(2008),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400835FD female "research_filter, clinical_filter" UYMD11362 1 144336555 144387477 50923 Gain 4 0.893822 16 3394 chas 0 - 0 - 0 - --- 1 0 - - ChAS 1q21.1 - "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 "LOC728875,PPIAL4A,PPIAL4C,PPIAL4B,LOC728855" 5 - - - "50923(5|Conrad(2009),McKernan(2009),Redon(2006))" 589(10|Matsuzaki(2009)) 100 1 - 0 "50923(52|Conrad(2009),Wong(2007),McKernan(2009),Durbin(2010),Kidd(2008),Perry(2008b),Pinto(2011))" FALSE TRUE ipn_no algo_no NA 400030WD female - XTPE89033 12 83168048 83218927 50880 Loss 1 0.906469 60 862 chas 78.37 Loss 85.73 Loss 85.71 Loss LossLossLoss 41 78.12 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12q21.31 - TMTC2 1 - 0 - - - "45474(9|Pang(2010),Wang(2007),Levy(2007),Redon(2006),Shaikh(2009))" - - 41 - 0 "50880(14|Wang(2007),Redon(2006),Itsara(2009),Levy(2007),Pang(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" VPWL90389 7 71665417 71716294 50878 Loss 1 0.922571 76 678 chas 100 Loss 100 Loss 100 Loss LossLossLoss 44 96 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 7q11.22 - CALN1 1 - 0 - - - 16638(9|Matsuzaki(2009)) - - 44 - 0 "50878(5|Levy(2007),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401912HD male "research_filter, clinical_filter" WUMM65746 17 44225752 44276618 50867 Gain 3 0.890732 47 1105 chas 59.73 Gain 100 Gain 0 - GainGain- 51 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400077EB female research_filter RBBO63662 17 44225752 44276618 50867 Gain 3 0.910097 47 1105 chas 100 Gain 100 Gain 0 - GainGain- 51 0 - - "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 401105WS male research_filter FISX28606 17 44225752 44276618 50867 Gain 3 0.898293 47 1105 chas 47.97 Gain 42.43 Gain 0 - GainGain- 51 100 Gain GTC "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400677HD male research_filter UAZI16039 17 44225752 44276618 50867 Gain 3 0.892117 47 1105 chas 47.97 Gain 100 Gain 0 - GainGain- 51 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400625FT male research_filter ORNW53006 17 44225752 44276618 50867 Gain 3 0.896244 47 1105 chas 59.73 Gain 100 Gain 0 - GainGain- 51 0 - - "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_no 400494ML female research_filter EZDG77492 17 44225752 44276618 50867 Gain 3 0.892143 47 1105 chas 100 Gain 100 Gain 0 - GainGain- 51 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes affy6_yes 400308SP male research_filter KMMD77027 17 44225752 44276618 50867 Gain 3 0.89112 47 1105 chas 47.97 Gain 40.81 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes NA 400783MJ male research_filter QIUJ19845 17 44225752 44276618 50867 Gain 3 0.896068 47 1105 chas 54.15 Gain 100 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes NA 401853WR male research_filter NYDB63609 17 44225752 44276618 50867 Gain 3 0.888821 47 1105 chas 0 - 21.23 Gain 0 - -Gain- 51 100 Gain "BS,GTC,IP6" "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes affy6_yes 400138LA female research_filter YAZD71442 17 44225752 44276618 50867 Gain 3 0.906268 47 1105 chas 0 - 54.23 Gain 0 - -Gain- 51 NA NA NA "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes NA 401859GS male research_filter NLWZ33045 17 44225752 44276618 50867 Gain 3 0.87973 47 1105 chas 0 - 100 Gain 0 - -Gain- 51 NA NA NA "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50867(1|Kidd(2008)) "50867(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 51 - 0 "50867(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes NA 401993HM female research_filter VHGW31501 11 50306193 50357043 50851 Gain 4 0.949914 8 7264 chas 25.96 Gain 0 - 0 - Gain-- 5 NA NA NA "ChAS,IPN" 11p11.12 - - 0 - 0 - - 50851(1|Kidd(2008)) "50851(9|Wang(2007),Redon(2006),Conrad(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" - 36 5 - 0 "50851(33|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401819BS female research_filter TEQK36134 11 50306193 50357043 50851 Gain 4 0.94055 8 7264 chas 25.96 Gain 51.56 Gain 0 - GainGain- 5 NA NA NA "ChAS,IPN,NXS" 11p11.12 - - 0 - 0 - - 50851(1|Kidd(2008)) "50851(9|Wang(2007),Redon(2006),Conrad(2009),Altshuler(2010),Pinto(2007),Cooper(2008),Shaikh(2009))" - 36 5 - 0 "50851(33|Teague(2010),Wong(2007),Redon(2006),Wang(2007),Conrad(2009),Itsara(2009),Altshuler(2010),Durbin(2010),Kidd(2008),Pinto(2007),Cooper(2008),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400908PJ female research_filter VUCC31552 Y 25548660 25599493 50834 Loss 0 0.86541 72 715 chas 100 Loss 0 - 0 - Loss-- 24 0 - - "ChAS,IPN" Yq11.223 - - 0 - 0 - "50834#3%""AZFc"":3056505,""AZFb"":5947153,""AZFb+AZFc"":7829005" - "50834(4|McCarroll(2008),Matsuzaki(2009),Perry(2008))" - 100 24 - 0 "50834(3|McCarroll(2008),Perry(2008),Campbell(2011))" TRUE TRUE ipn_yes algo_yes affy6_no 400109LJ male "research_filter, clinical_filter" YSLM40888 12 31356049 31406872 50824 Gain 3 0.902116 48 1081 chas 75.05 Gain 100 Gain 0 - GainGain- 58 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50824(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 58 - 0 "50824(94|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400460DM female research_filter FOMC40154 1 1621774 1672591 50818 Loss 1 0.901499 38 1373 chas 99.98 Loss 100 Loss 0 - LossLoss- 21 87.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" HXGR62358 1 1621774 1672591 50818 Loss 1 0.894956 38 1373 chas 99.98 Loss 93.94 Loss 100 Loss LossLossLoss 21 87.93 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male "research_filter, clinical_filter" DZXX36994 1 1621774 1672591 50818 Loss 1 0.889216 38 1373 chas 99.98 Loss 94.99 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401005BL female "research_filter, clinical_filter" RPJZ72910 1 1621774 1672591 50818 Loss 1 0.885545 38 1373 chas 99.98 Loss 100 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401395OP male "research_filter, clinical_filter" RXRT66436 1 1621774 1672591 50818 Loss 1 0.887162 38 1373 chas 99.98 Loss 94.99 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401414CR male "research_filter, clinical_filter" KZWZ86845 1 1621774 1672591 50818 Loss 0 0.966929 38 1373 chas 99.98 Loss 93.94 Loss 67.04 Loss LossLossLoss 21 NA NA NA "ChAS,IPN,NXS,PTK" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400178RH female "research_filter, clinical_filter" JPSN96941 1 1621774 1672591 50818 Loss 1 0.910026 38 1373 chas 99.98 Loss 100 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401612HB male "research_filter, clinical_filter" JTMA20495 1 1621774 1672591 50818 Loss 1 0.886417 38 1373 chas 99.98 Loss 93.94 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 402042BJ male "research_filter, clinical_filter" NNNK99860 1 1621774 1672591 50818 Loss 1 0.89231 38 1373 chas 99.98 Loss 88.93 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 400439IM female "research_filter, clinical_filter" QMDZ51984 1 1621774 1672591 50818 Loss 1 0.894304 38 1373 chas 99.98 Loss 93.94 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401979TB male "research_filter, clinical_filter" YZPM76095 1 1621774 1672591 50818 Loss 1 0.893579 38 1373 chas 99.98 Loss 100 Loss 0 - LossLoss- 21 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50818#1%""1p36 microdeletion syndrome"":5408761" - "50818(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50818(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401841OB male "research_filter, clinical_filter" OBJF39540 5 98770140 98820939 50800 Loss 1 0.905523 35 1494 chas 100 Loss 94.9 Loss 100 Loss LossLossLoss 37 NA NA NA "ChAS,IPN,NXS,PTK" 5q21.1 - - 0 - 0 - - - "34261(4|Wheeler(2008),McKernan(2009),Shaikh(2009))" - 35 36 - 0 "50800(9|Redon(2006),Sharp(2005),Itsara(2009),McKernan(2009),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401191MI male "research_filter, clinical_filter" LNDH30137 17 44225820 44276618 50799 Gain 3 0.886605 46 1128 chas 100 Gain 100 Gain 0 - GainGain- 50 NA NA NA "ChAS,IPN,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50799(1|Kidd(2008)) "50799(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 50 - 0 "50799(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_yes algo_yes NA 401808PS male research_filter TLUO25428 17 44225821 44276618 50798 Gain 3 0.893211 45 1154 chas 0 - 100 Gain 0 - -Gain- 50 NA NA NA "ChAS,NXS" 17q21.31 - "LOC644246,KIAA1267" 2 "LOC644246,KIAA1267" 2 - - 50798(1|Kidd(2008)) "50798(43|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),de Smith(2007),Levy(2007),Altshuler(2010),Itsara(2009),Conrad(2009),Pinto(2007),Cooper(2008),Jakobsson(2008),Wheeler(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 792(1|Conrad(2009)) - 50 - 0 "50798(205|Sebat(2004),Redon(2006),Conrad(2009),Locke(2006),Pinto(2007),Pinto(2011),Shaikh(2009),McCarroll(2008),De(Smith_2007),Wang(2007),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Wheeler(2008),Wong(2007),Perry(2008),Sharp(2005),Itsara(2009),Levy(2007),Durbin(2010),Altshuler(2010))" FALSE TRUE ipn_no algo_yes NA 401836SI female research_filter DVRF47676 1 1621774 1672540 50767 Loss 1 0.893184 36 1450 chas 99.98 Loss 93.28 Loss 0 - LossLoss- 20 NA NA NA "ChAS,IPN,NXS" 1p36.33 - "SLC35E2,MMP23A,SLC35E2B,CDK11B,CDK11A" 5 "CDK11B,SLC35E2,SLC35E2B,MMP23A,CDK11A" 5 - "50767#1%""1p36 microdeletion syndrome"":5408761" - "50767(12|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),McCarroll(2008),Park(2010))" 962(2|Mills(2006)) 84 20 - 0 "50767(50|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Levy(2007),Schuster(2010),Iafrate(2004),Durbin(2010),Pang(2010),Park(2010),McCarroll(2008),Pinto(2011),Mills(2006),Wong(2007))" TRUE TRUE ipn_yes algo_yes NA 401847RK male "research_filter, clinical_filter" NUMT67226 10 46996828 47047572 50745 Loss 1 0.86299 53 975 chas 0 - 0 - 0 - --- 23 NA NA NA ChAS 10q11.22 - GPRIN2 1 GPRIN2 1 - - "37254(6|Pang(2010),Ahn(2009),Korbel(2007),McKernan(2009))" "50745(31|Sebat(2004),Redon(2006),Perry(2008),Wang(2007),McKernan(2009),Conrad(2009),Pinto(2007),Park(2010),Jakobsson(2008),Ju(2010),Shaikh(2009),Zogopoulos(2007))" - - 23 - 0 "50745(176|Teague(2010),Ahn(2009),Korbel(2007),Redon(2006),Perry(2008),Conrad(2009),McKernan(2009),Conrad(2006),Durbin(2010),Pang(2010),Kidd(2008),Pinto(2007),Wang(2007),Sebat(2004),Park(2010),Pinto(2011),Jakobsson(2008),Schuster(2010),Ju(2010),Shaikh(2009))" TRUE TRUE ipn_no algo_no NA 401079HJ female clinical_filter KHBO80872 5 59722684 59773415 50732 Gain 3 0.90219 80 642 chas 98.55 Gain 99.68 Gain 99.68 Gain GainGainGain 34 98.19 Gain "BS,IP6" "ChAS,IPN,NXS,PTK" 5q12.1 - PDE4D 1 - 0 PDE4D - - "48842(3|Itsara(2009),Matsuzaki(2009),Shaikh(2009))" - 4 34 - 0 "49040(6|Itsara(2009),Kidd(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400718PS male "research_filter, clinical_filter" JUSU56143 19 55247894 55298567 50674 Loss 1 0.887324 16 3378 chas 0 - 0 - 0 - --- 18 0 - - ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR3DL3" 3 "KIR2DL3,KIR2DL1,KIR3DL3" 3 - - - "50674(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),McCarroll(2008))" - 100 18 - 0 "50674(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no affy6_no 400743LS female - XBDZ94110 19 55247894 55298567 50674 Loss 1 0.89479 16 3378 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR3DL3" 3 "KIR2DL3,KIR2DL1,KIR3DL3" 3 - - - "50674(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),McCarroll(2008))" - 100 18 - 0 "50674(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400649PS male - DQOB10223 19 55247894 55298567 50674 Loss 1 0.888285 16 3378 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR3DL3" 3 "KIR2DL3,KIR2DL1,KIR3DL3" 3 - - - "50674(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),McCarroll(2008))" - 100 18 - 0 "50674(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401567BD male - SMGW17663 19 55247894 55298567 50674 Loss 1 0.894203 16 3378 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR3DL3" 3 "KIR2DL3,KIR2DL1,KIR3DL3" 3 - - - "50674(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),McCarroll(2008))" - 100 18 - 0 "50674(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 400362TV female - JFDL89779 19 55247894 55298567 50674 Loss 1 0.914781 16 3378 chas 0 - 0 - 0 - --- 18 NA NA NA ChAS 19q13.42 - "KIR2DL3,KIR2DL1,KIR3DL3" 3 "KIR2DL3,KIR2DL1,KIR3DL3" 3 - - - "50674(20|Conrad(2009),Ahn(2009),Korbel(2007),Redon(2006),Matsuzaki(2009),Perry(2008),de Smith(2007),Altshuler(2010),Pinto(2007),Shaikh(2009),Simon-Sanchez(2007),McCarroll(2008))" - 100 18 - 0 "50674(94|Conrad(2009),Ahn(2009),Wong(2007),Redon(2006),Perry(2008),Sharp(2005),Altshuler(2010),Conrad(2006),Durbin(2010),Pinto(2011),Korbel(2007),Shaikh(2009),Campbell(2011),Perry(2008b),Locke(2006),De(Smith_2007),Simon-Sanchez(2007),McCarroll(2008))" FALSE TRUE ipn_no algo_no NA 401526WB male - YBGD61325 Y 28573634 28624288 50655 Loss 0 0.918589 24 2202 chas 99.98 Loss 0 - 0 - Loss-- 43 0 - - "ChAS,IPN" Yq11.23 - - 0 - 0 - - - 50655(1|Perry(2008)) - 82 43 - 0 "50655(2|Locke(2006),Redon(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400543CK male research_filter YBGD61325 7 116555402 116606037 50636 Gain 3 0.9085 40 1298 chas 98.77 Gain 99.53 Gain 0 - GainGain- 16 0 - - "ChAS,IPN,NXS" 7q31.2 - "CAPZA2,ST7,ST7-AS1,ST7-OT4" 4 "CAPZA2,ST7,ST7-AS1,ST7-OT4" 4 - - - 3609(1|Mills(2006)) - - 15 ST7#asd_candidate 1 "50636(5|Kidd(2008),Wong(2007),Durbin(2010),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_no 400543CK male research_filter XMVT70735 12 11503225 11553849 50625 Loss 1 0.940043 12 4602 chas 5.29 Loss 70.24 Loss 78.93 Loss LossLossLoss 49 62.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401873BK male research_filter AIRH51991 12 11503225 11553849 50625 Loss 1 0.927004 12 4602 chas 5.29 Loss 71 Loss 71 Loss LossLossLoss 49 62.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400236DB_1 male research_filter RAZI40834 12 11503225 11553849 50625 Loss 1 0.916847 12 4602 chas 5.29 Loss 71 Loss 71 Loss LossLossLoss 49 62.9 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male research_filter HXGR62358 12 11503225 11553849 50625 Gain 4 0.951446 12 4602 chas 5.29 Gain 9.99 Gain 71.53 Gain GainGainGain 49 62.9 Gain "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400156WT_1 male research_filter TFBW53379 12 11503225 11553849 50625 Gain 4 0.937098 12 4602 chas 5.29 Gain 71 Gain 0 - GainGain- 49 62.86 Gain "BS,GTC" "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 401087SF male research_filter HGCG44121 12 11503225 11553849 50625 Loss 1 0.916436 12 4602 chas 5.29 Loss 18.69 Loss 0 - LossLoss- 49 62.87 Loss "BS,IP6" "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400410CD male research_filter ABMS89106 12 11503225 11553849 50625 Loss 1 0.911704 12 4602 chas 5.39 Loss 60.37 Loss 60.37 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401674DD male research_filter PWPH55056 12 11503225 11553849 50625 Loss 1 0.905566 12 4602 chas 5.29 Loss 71 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401804FG male research_filter VRGJ17464 12 11503225 11553849 50625 Loss 1 0.905773 12 4602 chas 5.29 Loss 17.26 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401914PR male research_filter PTKC28903 12 11503225 11553849 50625 Loss 1 0.907585 12 4602 chas 5.39 Loss 9.77 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400442FE female research_filter UAVX81306 12 11503225 11553849 50625 Loss 1 0.924388 12 4602 chas 5.39 Loss 62.09 Loss 71 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400643LD male research_filter IREV30826 12 11503225 11553849 50625 Loss 1 0.906997 12 4602 chas 5.39 Loss 71 Loss 71 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401413RG male research_filter TZSA84286 12 11503225 11553849 50625 Loss 1 0.909853 12 4602 chas 5.39 Loss 70.24 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401166WJ female research_filter RGHO54100 12 11503225 11553849 50625 Gain 4 0.937867 12 4602 chas 4.71 Gain 71 Gain 0 - GainGain- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401882CR male research_filter EHXC97365 12 11503225 11553849 50625 Loss 1 0.914282 12 4602 chas 5.39 Loss 59.84 Loss 71 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401415CB male research_filter KKFR54086 12 11503225 11553849 50625 Loss 1 0.909395 12 4602 chas 5.39 Loss 80.11 Loss 80.11 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401443JK male research_filter CBBY76424 12 11503225 11553849 50625 Loss 1 0.913776 12 4602 chas 5.39 Loss 62.31 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401927SK female research_filter MGJR69521 12 11503225 11553849 50625 Loss 1 0.93043 12 4602 chas 5.39 Loss 71 Loss 71 Loss LossLossLoss 49 NA NA NA "ChAS,IPN,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401251WN female research_filter CORE80412 12 11503225 11553849 50625 Loss 1 0.905988 12 4602 chas 5.39 Loss 71 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400581VJ female research_filter JPEZ22320 12 11503225 11553849 50625 Loss 1 0.909453 12 4602 chas 5.39 Loss 71 Loss 0 - LossLoss- 49 NA NA NA "ChAS,IPN,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401149VA male research_filter OYDK45967 12 11503225 11553849 50625 Loss 1 0.915812 12 4602 chas 0 - 62.31 Loss 71 Loss #NAME? 49 62.87 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401162TM female research_filter JVBB89605 12 11503225 11553849 50625 Loss 1 0.919094 12 4602 chas 0 - 57.35 Loss 0 - -Loss- 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400650RM male research_filter YWQF89241 12 11503225 11553849 50625 Gain 4 0.938559 12 4602 chas 0 - 71 Gain 0 - -Gain- 49 61.05 Gain "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400509CJ female research_filter EXZC47846 12 11503225 11553849 50625 Loss 1 0.915191 12 4602 chas 0 - 78.94 Loss 0 - -Loss- 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400468OB female research_filter LAYE10086 12 11503225 11553849 50625 Loss 1 0.905179 12 4602 chas 0 - 71 Loss 71 Loss #NAME? 49 62.87 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400141CC female research_filter BQFC38547 12 11503225 11553849 50625 Gain 4 0.935866 12 4602 chas 0 - 71 Gain 0 - -Gain- 49 61.05 Gain "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400238BB female research_filter VLMR80827 12 11503225 11553849 50625 Loss 1 0.920057 12 4602 chas 0 - 71.53 Loss 71.53 Loss #NAME? 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401630MK female research_filter IJPA28382 12 11503225 11553849 50625 Loss 1 0.915281 12 4602 chas 0 - 71.53 Loss 78.93 Loss #NAME? 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400103BN female research_filter MGJJ89085 12 11503225 11553849 50625 Loss 1 0.921971 12 4602 chas 0 - 78.94 Loss 71 Loss #NAME? 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400615RI female research_filter GYBK42448 12 11503225 11553849 50625 Loss 1 0.909958 12 4602 chas 0 - 62.83 Loss 0 - -Loss- 49 62.87 Loss "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 401277RA female research_filter XBAT84080 12 11503225 11553849 50625 Loss 1 0.918638 12 4602 chas 0 - 70.24 Loss 0 - -Loss- 49 62.87 Loss "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400186WC female research_filter LYLG55293 12 11503225 11553849 50625 Loss 1 0.906227 12 4602 chas 0 - 71 Loss 71.53 Loss #NAME? 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 4000657TM female research_filter APCZ69205 12 11503225 11553849 50625 Loss 1 0.914442 12 4602 chas 0 - 71.53 Loss 0 - -Loss- 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400970VE female research_filter OLST13930 12 11503225 11553849 50625 Gain 4 0.932583 12 4602 chas 0 - 78.94 Gain 0 - -Gain- 49 62.9 Gain "BS,GTC,IP6" "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400007RG female research_filter QTRF59074 12 11503225 11553849 50625 Loss 1 0.914202 12 4602 chas 0 - 78.94 Loss 86.43 Loss #NAME? 49 62.9 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_yes 400881GS female research_filter UOXQ52793 12 11503225 11553849 50625 Loss 1 0.91347 12 4602 chas 0 - 71.53 Loss 78.93 Loss #NAME? 49 NA NA NA "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 400791GC female research_filter OUAW94182 12 11503225 11553849 50625 Gain 4 0.933119 12 4602 chas 0 - 45.93 Gain 71 Gain #NAME? 49 NA NA NA "ChAS,NXS,PTK" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 402063WM female research_filter BLGS11062 12 11503225 11553849 50625 Loss 1 0.915718 12 4602 chas 0 - 65.89 Loss 0 - -Loss- 49 NA NA NA "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401714BM female research_filter ZKED26020 12 11503225 11553849 50625 Gain 4 0.929173 12 4602 chas 0 - 71 Gain 0 - -Gain- 49 NA NA NA "ChAS,NXS" 12p13.2 - "PRB1,PRB2" 2 "PRB1,PRB2" 2 - - - "50625(39|Wang(2007),Redon(2006),Conrad(2005),Perry(2008),Kidd(2008),de Smith(2007),Altshuler(2010),Matsuzaki(2009),Itsara(2009),Conrad(2009),McCarroll(2008),Cooper(2008),Park(2010),McCarroll(2005),Ju(2010),Shaikh(2009))" 1(1|Levy(2007)) 90 49 - 0 "50625(165|Teague(2010),Redon(2006),Perry(2008),Ju(2010),Itsara(2009),Wang(2007),Schuster(2010),Conrad(2006),Park(2010),De(Smith_2007),Kidd(2008),Conrad(2009),Altshuler(2010),Durbin(2010),Campbell(2011),Perry(2008b),Pinto(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_no algo_yes NA 401652HL female research_filter UDNO19569 5 180380190 180430789 50600 Gain 3 0.914243 33 1581 chas 100 Gain 87.72 Gain 0 - GainGain- 17 NA NA NA "ChAS,IPN,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "50600(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 17 - 0 "50600(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401766MR male research_filter CLWS25417 5 180380190 180430789 50600 Gain 3 0.919771 33 1581 chas 0 - 85.92 Gain 0 - -Gain- 17 0 - - "ChAS,NXS" 5q35.3 - BTNL3 1 BTNL3 1 - - - "50600(21|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Pang(2010),McCarroll(2008),Park(2010),Kim(2009))" 599(1|de Smith(2007)) 11 17 - 0 "50600(133|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Alkan(2009),Levy(2007),Campbell(2011),Durbin(2010),Pang(2010),Pinto(2011),Wilson(2010),Altshuler(2010),Perry(2008b),Locke(2006),Park(2010),Kim(2009),De(Smith_2007),McCarroll(2008))" FALSE TRUE ipn_no algo_yes affy6_no 401661HD male research_filter UEII10946 16 32538293 32588890 50598 Loss 1 0.905368 8 7228 chas 0 - 0 - 0 - --- 16 NA NA NA ChAS 16p11.2 - - 0 - 0 - - 50598(1|Kidd(2008)) "50598(19|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),McKernan(2009),Altshuler(2010),McCarroll(2008),Cooper(2008),Park(2010),Wheeler(2008))" - 2 15 - 0 "50598(123|Conrad(2009),Korbel(2007),Perry(2008),Sebat(2004),Park(2010),Altshuler(2010),McKernan(2009),Durbin(2010),Kidd(2008),Wilson(2010),McCarroll(2008),Cooper(2008),Perry(2008b),Pinto(2011),Wheeler(2008),Sharp(2005),Locke(2006),De(Smith_2007),Shaikh(2009),Wong(2007))" FALSE TRUE ipn_no algo_no NA 401913GT male - QUIW42968 1 207697757 207748346 50590 Gain 3 0.905818 36 1445 chas 0 - 60.33 Gain 0 - -Gain- 9 NA NA NA "ChAS,NXS" 1q32.2 - CR1 1 CR1 1 CR1 - - "50590(21|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005),Park(2010))" - 100 9 - 0 "50590(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Alkan(2009),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Tuzun(2005),Park(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400926LJ female research_filter FPLE23103 1 207697758 207748346 50589 Gain 3 0.90267 35 1487 chas 0 - 83.9 Gain 0 - -Gain- 9 NA NA NA "ChAS,NXS" 1q32.2 - CR1 1 CR1 1 CR1 - - "50589(21|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005),Park(2010))" - 100 9 - 0 "50589(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Alkan(2009),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Tuzun(2005),Park(2010),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400337HG male research_filter WQLL63278 12 32013095 32063640 50546 Gain 3 0.885752 56 919 chas 45.14 Gain 0 - 0 - Gain-- 57 83.13 Gain "BS,IP6" "ChAS,IPN" 12p11.21 - - 0 - 0 - - - "50546(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 57 - 0 "50546(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400503HD male "research_filter, clinical_filter" PEOV46099 12 32013095 32063640 50546 Gain 3 0.898973 56 919 chas 98.74 Gain 99.18 Gain 0 - GainGain- 57 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50546(18|Wang(2007),Jakobsson(2008),Perry(2008),Conrad(2009),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 57 - 0 "50546(39|Teague(2010),Jakobsson(2008),Perry(2008),Wang(2007),Itsara(2009),Durbin(2010),Conrad(2009),Pinto(2007),Redon(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401110GJ female "research_filter, clinical_filter" KSUK43841 1 207697771 207748281 50511 Gain 3 0.899721 33 1578 chas 36.93 Gain 60.42 Gain 0 - GainGain- 9 NA NA NA "ChAS,IPN,NXS" 1q32.2 - CR1 1 CR1 1 CR1 - - "50511(21|Conrad(2009),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Kidd(2008),Tuzun(2005),Park(2010))" - 100 8 - 0 "50511(51|Teague(2010),Korbel(2007),Redon(2006),Perry(2008),Pinto(2011),Ju(2010),Alkan(2009),Campbell(2011),Durbin(2010),Kidd(2010b),Kidd(2008),Conrad(2009),Tuzun(2005),Park(2010),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401762SD male research_filter VZJA70154 14 48227024 48277484 50461 Loss 1 0.902017 40 1293 chas 90.28 Loss 90.67 Loss 0 - LossLoss- 31 90.16 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 14q21.3 - "LOC100506433,MIR548Y" 2 "LOC100506433,MIR548Y" 2 - - - "45485(2|Altshuler(2010),Shaikh(2009))" - - 31 - 0 "45518(4|Itsara(2009),Altshuler(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401427CB male "research_filter, clinical_filter" QGND60775 14 48227024 48277484 50461 Loss 1 0.926662 40 1293 chas 99.8 Loss 95.44 Loss 99.89 Loss LossLossLoss 31 90.16 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 14q21.3 - "LOC100506433,MIR548Y" 2 "LOC100506433,MIR548Y" 2 - - - "45485(2|Altshuler(2010),Shaikh(2009))" - - 31 - 0 "45518(4|Itsara(2009),Altshuler(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401085LA_1 female "research_filter, clinical_filter" QITC50272 14 48227024 48277484 50461 Loss 1 0.911215 40 1293 chas 90.28 Loss 90.67 Loss 90.68 Loss LossLossLoss 31 NA NA NA "ChAS,IPN,NXS,PTK" 14q21.3 - "LOC100506433,MIR548Y" 2 "LOC100506433,MIR548Y" 2 - - - "45485(2|Altshuler(2010),Shaikh(2009))" - - 31 - 0 "45518(4|Itsara(2009),Altshuler(2010),Redon(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" WFIZ12719 6 330692 381137 50446 Gain 3 0.880087 112 454 chas 0 - 99.98 Gain 0 - -Gain- 68 0 - - "ChAS,NXS" 6p25.3 - DUSP22 1 DUSP22 1 - - - "50446(21|Sebat(2004),Redon(2006),Conrad(2005),Perry(2008),Conrad(2009),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),Itsara(2009),Pinto(2007),Park(2010),Ju(2010),McCarroll(2008))" 2(2|Levy(2007)) - 67 - 0 "50446(56|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Ju(2010),Itsara(2009),Levy(2007),Campbell(2011),Conrad(2006),Altshuler(2010),Durbin(2010),Bentley(2008),Pang(2010),Kidd(2008),McCarroll(2008),Perry(2008b),Park(2010),Teague(2010),De(Smith_2007),Shaikh(2009))" TRUE TRUE ipn_no algo_yes affy6_no 400793BR male "research_filter, clinical_filter" VKGU19422 21 40103880 40154299 50420 Gain 3 0.907788 57 900 chas 79.65 Gain 86.41 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 21q22.2 - LINC00114 1 LINC00114 1 - - - 38256(1|Itsara(2009)) - - 40 - 0 "50420(10|Itsara(2009),Kidd(2008),Jakobsson(2008),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400778SR female "research_filter, clinical_filter" CHNV74218 21 40103880 40154299 50420 Gain 3 0.904594 57 900 chas 79.65 Gain 89.77 Gain 0 - GainGain- 40 NA NA NA "ChAS,IPN,NXS" 21q22.2 - LINC00114 1 LINC00114 1 - - - 38256(1|Itsara(2009)) - - 40 - 0 "50420(10|Itsara(2009),Kidd(2008),Jakobsson(2008),Shaikh(2009),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 400837HN female "research_filter, clinical_filter" RJMG42549 7 154907921 154958336 50416 Gain 3 0.892373 46 1120 chas 89.44 Gain 70.8 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 7q36.2 - - 0 - 0 - - - "50416(5|Conrad(2009),McKernan(2009),Shaikh(2009),Zogopoulos(2007))" "2345(14|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" - 51 - 0 "15436(52|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400749VW male research_filter FMEA92817 7 154907921 154958336 50416 Gain 3 0.90915 46 1120 chas 99.53 Gain 99.76 Gain 0 - GainGain- 51 NA NA NA "ChAS,IPN,NXS" 7q36.2 - - 0 - 0 - - - "50416(5|Conrad(2009),McKernan(2009),Shaikh(2009),Zogopoulos(2007))" "2345(14|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),Bentley(2008),Wheeler(2008),Mills(2006))" - 51 - 0 "15436(52|Conrad(2009),Ahn(2009),Wang(2008),Levy(2007),McKernan(2009),Durbin(2010),Bentley(2008),Pang(2010),Pinto(2011),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401175FA female research_filter PYHX78792 4 104199892 104250294 50403 Loss 1 0.904349 32 1625 chas 77.82 Loss 79.58 Loss 79.59 Loss LossLossLoss 56 81.58 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q24 - - 0 - 0 - - - "50403(15|Sebat(2004),Conrad(2005),Perry(2008),Wang(2007),Itsara(2009),Altshuler(2010),Matsuzaki(2009),Conrad(2009),McCarroll(2008),Shaikh(2009))" 850(1|McCarroll(2005)) - 56 - 0 "50403(41|Sebat(2004),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Wang(2007),Conrad(2006),Durbin(2010),Altshuler(2010),Campbell(2011),McCarroll(2006),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401799DP male "research_filter, clinical_filter" ZPIM60940 12 31356711 31407111 50401 Gain 3 0.89532 50 1028 chas 100 Gain 70.27 Gain 0 - GainGain- 57 91.24 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50401(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 56 - 0 "50401(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400802DP female "research_filter, clinical_filter" GKVG35266 4 161952214 162002577 50364 Gain 3 0.899403 32 1624 chas 88.11 Gain 99.99 Gain 0 - GainGain- 42 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400248JO female research_filter VYEA28313 4 161952214 162002577 50364 Gain 3 0.918866 32 1624 chas 88.11 Gain 100 Gain 0 - GainGain- 42 99.97 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400983PV female research_filter OAGJ33866 4 161952214 162002577 50364 Gain 4 0.945477 32 1624 chas 100 Gain 100 Gain 100 Gain GainGainGain 42 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401265CB male research_filter IAQN76409 4 161952214 162002577 50364 Gain 3 0.895501 32 1624 chas 100 Gain 100 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401820SD female research_filter TLUO25428 4 161952214 162002577 50364 Gain 3 0.907593 32 1624 chas 47.06 Gain 100 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401836SI female research_filter MRIL85955 4 161952214 162002577 50364 Gain 3 0.898806 32 1624 chas 69.55 Gain 98.25 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400705KK male research_filter NKNM36178 4 161952214 162002577 50364 Gain 3 0.901259 32 1624 chas 100 Gain 100 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400668TD male research_filter EGVC41637 4 161952214 162002577 50364 Gain 3 0.901568 32 1624 chas 100 Gain 100 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401939GD male research_filter WDRZ91881 4 161952214 162002577 50364 Gain 3 0.89551 32 1624 chas 69.55 Gain 78.77 Gain 0 - GainGain- 42 NA NA NA "ChAS,IPN,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 401426WD male research_filter WXKO33327 4 161952214 162002577 50364 Gain 4 0.945033 32 1624 chas 100 Gain 100 Gain 100 Gain GainGainGain 42 NA NA NA "ChAS,IPN,NXS,PTK" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400496BL female research_filter GUZB61909 4 161952214 162002577 50364 Gain 3 0.899361 32 1624 chas 0 - 100 Gain 0 - -Gain- 42 99.97 Gain "BS,GTC,IP6" "ChAS,NXS" 4q32.2 - - 0 - 0 - - - "50364(13|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50364(27|Wang(2007),Wong(2007),Jakobsson(2008),Perry(2008),Itsara(2009),Durbin(2010),Redon(2006),Shaikh(2009))" FALSE TRUE ipn_no algo_yes affy6_yes 401029SD_1 female research_filter XQAG43010 6 95509861 95560154 50294 Loss 1 0.911666 46 1117 chas 95.27 Loss 83.35 Loss 97.64 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 6q16.1 - - 0 - 0 - - - "50294(5|Itsara(2009),Pinto(2007),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50294(11|Itsara(2009),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400953MR female "research_filter, clinical_filter" DZVA59681 2 98118199 98168469 50271 Loss 1 0.921787 20 2645 chas 47.29 Loss 55.32 Loss 0 - LossLoss- 11 NA NA NA "ChAS,IPN,NXS" 2q11.2 - ANKRD36B 1 ANKRD36B 1 - - - "50271(15|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Kidd(2008),McCarroll(2008))" "895(2|Conrad(2009),Perry(2008))" 100 11 - 0 "50271(63|Conrad(2009),Redon(2006),Perry(2008),Ju(2010),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Pinto(2011),De(Smith_2007),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes NA 400606HW male research_filter EXZC47846 11 55402801 55452996 50196 Loss 1 0.875367 76 669 chas 100 Loss 0 - 0 - Loss-- 37 100 Loss "BS,GTC,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400468OB female "research_filter, clinical_filter" XMEG92101 11 55402801 55452996 50196 Loss 1 0.867052 76 669 chas 100 Loss 0 - 0 - Loss-- 37 100 Loss "BS,IP6" "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 401155ML male "research_filter, clinical_filter" UOXQ52793 11 55402801 55452996 50196 Loss 1 0.862371 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400791GC female "research_filter, clinical_filter" ISVP82924 11 55402801 55452996 50196 Loss 1 0.866771 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401400NP male "research_filter, clinical_filter" KSUK43841 11 55402801 55452996 50196 Loss 1 0.867355 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401762SD male "research_filter, clinical_filter" UKYN40755 11 55402801 55452996 50196 Loss 1 0.873469 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401969DR male "research_filter, clinical_filter" LOOD16085 11 55402801 55452996 50196 Loss 1 0.873238 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 400376SJ female "research_filter, clinical_filter" WFGA96432 11 55402801 55452996 50196 Loss 1 0.871681 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401493HC male "research_filter, clinical_filter" VVRJ19010 11 55402801 55452996 50196 Loss 1 0.870039 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401535RJ male "research_filter, clinical_filter" SSWV37655 11 55402801 55452996 50196 Loss 1 0.862959 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401706BJ female "research_filter, clinical_filter" VIXQ67410 11 55402801 55452996 50196 Loss 1 0.86709 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" JAVP94180 11 55402801 55452996 50196 Loss 1 0.866131 76 669 chas 100 Loss 0 - 0 - Loss-- 37 NA NA NA "ChAS,IPN" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401932GN female "research_filter, clinical_filter" LNYN65073 11 55402801 55452996 50196 Gain 3 0.877528 76 669 chas 0 - 99.45 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401924ST male "research_filter, clinical_filter" ORXH15927 11 55402801 55452996 50196 Gain 3 0.876661 76 669 chas 0 - 58.97 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400266BA female "research_filter, clinical_filter" TZGC22320 11 55402801 55452996 50196 Gain 3 0.884983 76 669 chas 0 - 79.43 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401295HB male "research_filter, clinical_filter" XNUA56302 11 55402801 55452996 50196 Gain 3 0.887203 76 669 chas 0 - 100 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400344DR_1 male "research_filter, clinical_filter" KRCX57170 11 55402801 55452996 50196 Gain 3 0.87976 76 669 chas 0 - 99.99 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401460LW male "research_filter, clinical_filter" NUHG48677 11 55402801 55452996 50196 Gain 3 0.882777 76 669 chas 0 - 100 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 40050SB female "research_filter, clinical_filter" NYDB63609 11 55402801 55452996 50196 Gain 3 0.889041 76 669 chas 0 - 41.79 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400138LA female "research_filter, clinical_filter" MAKG95944 11 55402801 55452996 50196 Gain 3 0.880845 76 669 chas 0 - 31.3 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400041LJ male "research_filter, clinical_filter" QXAY99372 11 55402801 55452996 50196 Gain 3 0.890035 76 669 chas 0 - 99.84 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400040CN male "research_filter, clinical_filter" HBRB11217 11 55402801 55452996 50196 Gain 3 0.873403 76 669 chas 0 - 78.36 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 400302HW male "research_filter, clinical_filter" ZJYL67451 11 55402801 55452996 50196 Gain 3 0.883406 76 669 chas 0 - 56.07 Gain 0 - -Gain- 37 0 - - "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes affy6_no 401025SM male "research_filter, clinical_filter" AUMQ17072 11 55402801 55452996 50196 Gain 3 0.884142 76 669 chas 0 - 80.61 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401856GC male "research_filter, clinical_filter" GBQV50998 11 55402801 55452996 50196 Gain 3 0.880773 76 669 chas 0 - 66.41 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401818PC male "research_filter, clinical_filter" JKGU55742 11 55402801 55452996 50196 Gain 3 0.882841 76 669 chas 0 - 78.58 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 400880TM male "research_filter, clinical_filter" KKFR54086 11 55402801 55452996 50196 Gain 3 0.885417 76 669 chas 0 - 82.64 Gain 0 - -Gain- 37 NA NA NA "ChAS,NXS" 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_yes NA 401443JK male "research_filter, clinical_filter" VAOW46427 11 55402801 55452996 50196 Gain 3 0.889365 76 669 chas 0 - 0 - 0 - --- 37 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400528LR male clinical_filter GKVG35266 11 55402801 55452996 50196 Gain 3 0.886816 76 669 chas 0 - 0 - 0 - --- 37 0 - - ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no affy6_no 400248JO female clinical_filter PQBD71126 11 55402801 55452996 50196 Gain 3 0.877289 76 669 chas 0 - 0 - 0 - --- 37 NA NA NA ChAS 11q11 - "OR4P4,OR4C6,OR4S2" 3 "OR4P4,OR4C6,OR4S2" 3 - - "49152(2|Kidd(2008),Korbel(2007))" "50196(69|Sebat(2004),Redon(2006),Matsuzaki(2009),Perry(2008),Wang(2007),de Smith(2007),Altshuler(2010),Park(2010),Gusev(2009),Kidd(2008),Conrad(2009),Pinto(2007),Cooper(2008),Tuzun(2005),Itsara(2009),Jakobsson(2008),Wheeler(2008),Young(2008),Shaikh(2009),McCarroll(2008))" - - 37 - 0 "50196(724|Sebat(2004),Korbel(2007),Redon(2006),Wang(2007),Perry(2008b),Pinto(2007),Locke(2006),Shaikh(2009),Young(2008),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Teague(2010),De(Smith_2007),Conrad(2009),Jakobsson(2008),Alkan(2009),Cooper(2008),Campbell(2011),Tuzun(2005),Wheeler(2008),Wong(2007),Perry(2008),Itsara(2009),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_no algo_no NA 401010HT female clinical_filter CBEA57280 12 31356929 31407111 50183 Gain 3 0.896496 49 1045 chas 74.25 Gain 74.17 Gain 0 - GainGain- 57 100 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50183(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 56 - 0 "50183(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes affy6_yes 400231LP female research_filter DSDE67128 12 31356929 31407111 50183 Gain 3 0.889415 49 1045 chas 74.25 Gain 0 - 0 - Gain-- 57 NA NA NA "ChAS,IPN" 12p11.21 - - 0 - 0 - - - "50183(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 56 - 0 "50183(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401125LM female research_filter HAAE15834 8 47398662 47448839 50178 Loss 1 0.891838 18 2951 chas 0 - 32.92 Loss 0 - -Loss- 19 NA NA NA "ChAS,NXS" 8q11.1 - - 0 - 0 - - - "50178(8|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" 853(1|Conrad(2009)) - 18 - 0 "50178(33|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Simon-Sanchez(2007))" FALSE TRUE ipn_no algo_yes NA 401899MB male research_filter VBEF49630 8 47398662 47448839 50178 Loss 1 0.892142 18 2951 chas 0 - 86.17 Loss 0 - -Loss- 19 NA NA NA "ChAS,NXS" 8q11.1 - - 0 - 0 - - - "50178(8|Conrad(2009),Ahn(2009),Redon(2006),Wang(2008),Levy(2007),Pang(2010),Simon-Sanchez(2007),Shaikh(2009))" 853(1|Conrad(2009)) - 18 - 0 "50178(33|Conrad(2009),Ahn(2009),Wong(2007),Itsara(2009),Levy(2007),Durbin(2010),Pang(2010),Wang(2008),Wilson(2010),Shaikh(2009),Simon-Sanchez(2007))" FALSE TRUE ipn_no algo_yes NA 400022WA female research_filter HAGL80690 10 43199588 43249759 50172 Gain 3 0.891197 43 1194 chas 88.42 Gain 91.18 Gain 0 - GainGain- 40 94.12 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 10q11.21 - - 0 - 0 - - - "50172(6|Park(2010),Pinto(2007),Redon(2006),Matsuzaki(2009),Perry(2008))" 955(1|Matsuzaki(2009)) 97 40 - 0 "50172(6|Park(2010),Pinto(2007),Redon(2006),Perry(2008),Shaikh(2009))" FALSE TRUE ipn_yes algo_yes affy6_yes 400542EG female research_filter JYQV48819 17 34425363 34475531 50169 Gain 3 0.886688 60 850 chas 70.87 Gain 50.29 Gain 0 - GainGain- 60 76.55 Gain "BS,IP6" "ChAS,IPN,NXS" 17q12 - CCL4 1 CCL4 1 - - - "50169(40|Wang(2007),McKernan(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Conrad(2009),de Smith(2007),Altshuler(2010),Pinto(2007),Cooper(2008),Park(2010),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" 793(1|Park(2010)) 24 59 - 0 "50169(231|Conrad(2009),Wong(2007),Redon(2006),Perry(2008),Wang(2007),Itsara(2009),Levy(2007),Campbell(2011),Alkan(2009),Altshuler(2010),Durbin(2010),Park(2010),Pinto(2007),Kidd(2008),Cooper(2008),Perry(2008b),Pinto(2011),McKernan(2009),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400449PK female "research_filter, clinical_filter" JVBB89605 5 97043561 97093721 50161 Loss 1 0.904044 33 1567 chas 60.93 Loss 93.44 Loss 93.45 Loss LossLossLoss 43 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400650RM male "research_filter, clinical_filter" ORXH15927 5 97043561 97093721 50161 Loss 1 0.914083 33 1567 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 43 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400266BA female "research_filter, clinical_filter" KLEB18411 5 97043561 97093721 50161 Loss 1 0.919425 33 1567 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 43 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400300SD female "research_filter, clinical_filter" EFHU67365 5 97043561 97093721 50161 Loss 1 0.917 33 1567 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401333MM male "research_filter, clinical_filter" WHOU87472 5 97043561 97093721 50161 Loss 1 0.908979 33 1567 chas 86.44 Loss 93.44 Loss 0 - LossLoss- 43 NA NA NA "ChAS,IPN,NXS" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401380OL male "research_filter, clinical_filter" NBLH72263 5 97043561 97093721 50161 Loss 1 0.910564 33 1567 chas 86.44 Loss 86.7 Loss 93.45 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401532LJ female "research_filter, clinical_filter" ZWJR15881 5 97043561 97093721 50161 Loss 1 0.923845 33 1567 chas 86.44 Loss 86.7 Loss 93.45 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401119DK male "research_filter, clinical_filter" VIXQ67410 5 97043561 97093721 50161 Loss 1 0.909795 33 1567 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401297KC male "research_filter, clinical_filter" IORF34772 5 97043561 97093721 50161 Loss 1 0.919246 33 1567 chas 86.44 Loss 86.7 Loss 93.45 Loss LossLossLoss 43 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50161(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 43 - 0 "50161(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400261RN female "research_filter, clinical_filter" FOMC40154 5 97043561 97093707 50147 Loss 1 0.911035 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 401096SL male "research_filter, clinical_filter" CKLN80228 5 97043561 97093707 50147 Loss 1 0.921249 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400695PH female "research_filter, clinical_filter" XOPW74186 5 97043561 97093707 50147 Loss 1 0.92537 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400897MD male "research_filter, clinical_filter" RVAL88696 5 97043561 97093707 50147 Loss 1 0.899502 32 1617 chas 86.44 Loss 86.7 Loss 0 - LossLoss- 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400353ML male "research_filter, clinical_filter" GNXG93257 5 97043561 97093707 50147 Loss 1 0.908207 32 1617 chas 86.44 Loss 93.44 Loss 0 - LossLoss- 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400108BJ female "research_filter, clinical_filter" QRLG88085 5 97043561 97093707 50147 Loss 1 0.916636 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 90.22 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes affy6_yes 400759FV female "research_filter, clinical_filter" JHGL98054 5 97043561 97093707 50147 Loss 1 0.918319 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400368SD female "research_filter, clinical_filter" IREV30826 5 97043561 97093707 50147 Loss 1 0.904122 32 1617 chas 86.44 Loss 86.7 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401413RG male "research_filter, clinical_filter" OWWR99794 5 97043561 97093707 50147 Loss 1 0.926017 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401497PR male "research_filter, clinical_filter" SFLX52247 5 97043561 97093707 50147 Loss 1 0.909964 32 1617 chas 86.44 Loss 86.7 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401640WJ male "research_filter, clinical_filter" GLGF34868 5 97043561 97093707 50147 Loss 1 0.92596 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401268PS male "research_filter, clinical_filter" CBBY76424 5 97043561 97093707 50147 Loss 1 0.929366 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401927SK female "research_filter, clinical_filter" MGJR69521 5 97043561 97093707 50147 Loss 1 0.922541 32 1617 chas 86.44 Loss 93.44 Loss 100 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401251WN female "research_filter, clinical_filter" KTQJ52506 5 97043561 97093707 50147 Loss 1 0.937692 32 1617 chas 86.44 Loss 93.44 Loss 93.45 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50147(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50147(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 400218WK female "research_filter, clinical_filter" XBDZ94110 12 129225749 129275893 50145 Gain 3 0.89991 48 1066 chas 99.89 Gain 58.61 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12q24.32 - - 0 - 0 - - - "44212(11|Wang(2007),Pinto(2007),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" "1412(3|Shaikh(2009),Perry(2008))" - 61 - 0 "50145(23|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Altshuler(2010),Pinto(2011),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 400649PS male research_filter XROV61149 12 129225749 129275893 50145 Gain 3 0.909784 48 1066 chas 73.18 Gain 87.27 Gain 0 - GainGain- 61 NA NA NA "ChAS,IPN,NXS" 12q24.32 - - 0 - 0 - - - "44212(11|Wang(2007),Pinto(2007),Perry(2008),Conrad(2009),Itsara(2009),Altshuler(2010),Zogopoulos(2007),Shaikh(2009),McCarroll(2008))" "1412(3|Shaikh(2009),Perry(2008))" - 61 - 0 "50145(23|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Conrad(2009),Itsara(2009),Durbin(2010),Altshuler(2010),Pinto(2011),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401480PG male research_filter DEYQ16754 5 97043578 97093707 50130 Loss 1 0.909879 31 1671 chas 86.47 Loss 86.73 Loss 93.48 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50130(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50130(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401825TH female "research_filter, clinical_filter" GWDY85049 5 97043578 97093707 50130 Loss 1 0.91291 31 1671 chas 86.47 Loss 86.73 Loss 93.48 Loss LossLossLoss 42 NA NA NA "ChAS,IPN,NXS,PTK" 5q15 - - 0 - 0 - - - "50130(22|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),McKernan(2009),Altshuler(2010),Gusev(2009),Pinto(2007),Itsara(2009),Jakobsson(2008),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - - 42 - 0 "50130(65|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),McKernan(2009),Durbin(2010),Gusev(2009),Altshuler(2010),Jakobsson(2008),De(Smith_2007),Shaikh(2009),McCarroll(2008))" TRUE TRUE ipn_yes algo_yes NA 401093VL female "research_filter, clinical_filter" WUVU37744 3 113564243 113614340 50098 Loss 1 0.904998 48 1065 chas 82.87 Loss 91.42 Loss 91.42 Loss LossLossLoss 25 82.89 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 3q13.31 - GRAMD1C 1 GRAMD1C 1 - - - "50098(3|Itsara(2009),Shaikh(2009))" - 3 25 - 0 "50098(6|Itsara(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401763SG male "research_filter, clinical_filter" APGE11753 3 113564243 113614340 50098 Loss 1 0.926436 48 1065 chas 82.87 Loss 91.42 Loss 91.42 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 3q13.31 - GRAMD1C 1 GRAMD1C 1 - - - "50098(3|Itsara(2009),Shaikh(2009))" - 3 25 - 0 "50098(6|Itsara(2009),Wong(2007),Durbin(2010),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401017SC female "research_filter, clinical_filter" WYBU35088 6 142523316 142573401 50086 Loss 1 0.91732 36 1431 chas 69.71 Loss 82.09 Loss 90.95 Loss LossLossLoss 26 98.42 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q24.1 - VTA1 1 VTA1 1 - - - - - - 26 - 0 "44984(4|Kidd(2008),Wong(2007),Durbin(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400579HJ female "research_filter, clinical_filter" CWGV78054 4 69435889 69485966 50078 Loss 1 0.858584 41 1251 chas 99.98 Loss 0 - 0 - Loss-- 34 100 Loss BS "ChAS,IPN" 4q13.2 - - 0 - 0 - - - "50078(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 34 - 0 "50078(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400599CP female "research_filter, clinical_filter" HEJH85210 4 69435889 69485966 50078 Gain 3 0.894852 41 1251 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 34 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "50078(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 34 - 0 "50078(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401884WJ male research_filter AGIM53957 4 69435889 69485966 50078 Gain 3 0.89369 41 1251 chas 0 - 99.89 Gain 0 - -Gain- 34 100 Gain GTC "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "50078(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 34 - 0 "50078(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400564SN female research_filter ATJL19217 4 69435889 69485966 50078 Gain 3 0.889199 41 1251 chas 0 - 100 Gain 100 Gain #NAME? 34 NA NA NA "ChAS,NXS,PTK" 4q13.2 - - 0 - 0 - - - "50078(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 34 - 0 "50078(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401608GE female research_filter FSGH36026 19 36757242 36807287 50046 Loss 1 0.89133 15 3574 chas 0 - 0 - 0 - --- 4 NA NA NA ChAS 19q13.12 - "LOC100134317,LOC100506930" 2 "LOC100134317,LOC100506930" 2 - - - "50046(7|Kidd(2008),Ju(2010),Matsuzaki(2009),Perry(2008),Conrad(2009))" 914(2|Matsuzaki(2009)) 98 4 - 0 "50046(26|Teague(2010),Ju(2010),Perry(2008),Conrad(2009),Durbin(2010),Kidd(2008),Wilson(2010),Pinto(2011),Shaikh(2009))" FALSE TRUE ipn_no algo_no NA 401254AE male - AUMQ17072 12 31357102 31407111 50010 Gain 3 0.902191 48 1064 chas 69.65 Gain 84.23 Gain 0 - GainGain- 56 NA NA NA "ChAS,IPN,NXS" 12p11.21 - - 0 - 0 - - - "50010(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 55 - 0 "50010(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401856GC male research_filter ICZT95489 12 31357102 31407110 50009 Gain 3 0.904477 47 1087 chas 91.93 Gain 100 Gain 100 Gain GainGainGain 55 NA NA NA "ChAS,IPN,NXS,PTK" 12p11.21 - - 0 - 0 - - - "50009(27|Wang(2007),Jakobsson(2008),Matsuzaki(2009),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),McCarroll(2008),Shaikh(2009),Zogopoulos(2007))" - 5 55 - 0 "50009(91|Wang(2007),Wong(2007),Redon(2006),Perry(2008),Itsara(2009),Campbell(2011),Durbin(2010),Pinto(2007),Simon-Sanchez(2007),Perry(2008b),Pinto(2011),Jakobsson(2008),Shaikh(2009),McCarroll(2008))" FALSE TRUE ipn_yes algo_yes NA 401386WA male research_filter NXEA90195 10 68350265 68400259 49995 Loss 1 0.940372 56 909 chas 91.39 Loss 95.68 Loss 95.69 Loss LossLossLoss 39 91.15 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10q21.3 - CTNNA3 1 CTNNA3 1 - - - "49995(4|Itsara(2009),Park(2010),Redon(2006),Shaikh(2009))" - - 39 - 0 "49995(22|Wong(2007),Redon(2006),Itsara(2009),Durbin(2010),Kidd(2008),Park(2010),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401133JG male "research_filter, clinical_filter" YLSX27992 11 49710692 49760676 49985 Loss 1 0.889708 58 876 chas 99.98 Loss 69.99 Loss 0 - LossLoss- 34 99.66 Loss "BS,IP6" "ChAS,IPN,NXS" 11p11.12 - LOC440040 1 - 0 - - "20262(2|Kidd(2008),Tuzun(2005))" "49985(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 33 - 0 "49985(89|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" KRGM31190 3 173239853 173289835 49983 Gain 3 0.901987 50 1020 chas 98.44 Gain 100 Gain 0 - GainGain- 24 98.13 Gain BS "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male research_filter GTRU40344 3 173239853 173289835 49983 Gain 3 0.900913 50 1020 chas 98.44 Gain 100 Gain 0 - GainGain- 24 98.13 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400134WK_1 male research_filter CZJD30358 3 173239853 173289835 49983 Gain 3 0.886188 50 1020 chas 99.59 Gain 93.99 Gain 0 - GainGain- 24 98.15 Gain "BS,GTC,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400063BR female research_filter UKYN40755 3 173239853 173289835 49983 Gain 3 0.89169 50 1020 chas 98.44 Gain 99.57 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401969DR male research_filter GHOG89686 3 173239853 173289835 49983 Gain 3 0.892743 50 1020 chas 80.58 Gain 81.16 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401459HF male research_filter WMBQ46007 3 173239853 173289835 49983 Gain 3 0.89749 50 1020 chas 99.43 Gain 99.03 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401230NL female research_filter THNQ55263 3 173239853 173289835 49983 Gain 3 0.89388 50 1020 chas 99.43 Gain 100 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400960TN female research_filter BWCN37814 3 173239853 173289835 49983 Gain 3 0.899209 50 1020 chas 29.25 Gain 100 Gain 0 - GainGain- 24 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49983(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 24 NLGN1#asd_candidate 1 "49983(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401966SR male research_filter HXSU46589 9 21178271 21228247 49977 Loss 1 0.905219 52 979 chas 87.59 Loss 92.78 Loss 92.78 Loss LossLossLoss 43 92.07 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 9p21.3 - "IFNA17,IFNA10,IFNA7,IFNA16,IFNA4" 5 "IFNA17,IFNA10,IFNA7,IFNA16,IFNA4" 5 - - - "32551(7|McCarroll(2005),Ahn(2009),Redon(2006),Shaikh(2009),Perry(2008))" - 100 43 - 0 "46040(11|Ahn(2009),Redon(2006),Perry(2008),Durbin(2010),Pinto(2011),McCarroll(2006),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 401299ST female "research_filter, clinical_filter" LLRB50237 4 35671613 35721587 49975 Loss 1 0.932759 28 1850 chas 86.68 Loss 93.25 Loss 93.25 Loss LossLossLoss 23 NA NA NA "ChAS,IPN,NXS,PTK" 4p15.1 - - 0 - 0 - - - 3431(1|Matsuzaki(2009)) "842(2|Levy(2007),Matsuzaki(2009))" - 23 - 0 "7197(2|Jakobsson(2008),Durbin(2010))" TRUE TRUE ipn_yes algo_yes NA 401594MP female "research_filter, clinical_filter" OWVL37831 6 162912388 162962360 49973 Loss 1 0.926085 77 657 chas 100 Loss 100 Loss 100 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 - 0 PARK2 - - "49973(12|Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),Zogopoulos(2007))" - - 52 PARK2#asd_candidate 1 "49973(20|Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 400770MA female "research_filter, clinical_filter" BLGS11062 6 140861192 140911135 49944 Loss 1 0.910572 36 1426 chas 86.65 Loss 93.35 Loss 93.35 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 6q24.1 - - 0 - 0 - - - - - - 30 - 0 "49944(3|Wong(2007),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes NA 401714BM female "research_filter, clinical_filter" VVDA27035 4 69435889 69485827 49939 Loss 0 0.96496 40 1280 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400377WJ male "research_filter, clinical_filter" OTAJ32230 4 69435889 69485827 49939 Loss 0 0.958494 40 1280 chas 99.98 Loss 60.13 Loss 100.01 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400785AK female "research_filter, clinical_filter" BQFC38547 4 69435889 69485827 49939 Loss 0 0.960629 40 1280 chas 99.98 Loss 60.13 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400238BB female "research_filter, clinical_filter" RVIS81666 4 69435889 69485827 49939 Loss 0 0.967177 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401852SK male "research_filter, clinical_filter" JXQB25794 4 69435889 69485827 49939 Loss 0 0.961617 40 1280 chas 99.98 Loss 60.13 Loss 90.62 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 402009WP male "research_filter, clinical_filter" HBQS50118 4 69435889 69485827 49939 Loss 0 0.960423 40 1280 chas 100 Loss 60.13 Loss 92.33 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400205SP_1 male "research_filter, clinical_filter" IRJE88693 4 69435889 69485827 49939 Loss 0 0.971528 40 1280 chas 99.98 Loss 100 Loss 90.62 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400739SS_1 female "research_filter, clinical_filter" GTRU40344 4 69435889 69485827 49939 Loss 0 0.971727 40 1280 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400134WK_1 male "research_filter, clinical_filter" WKJP80388 4 69435889 69485827 49939 Loss 0 0.969133 40 1280 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400320RN male "research_filter, clinical_filter" SKOC60180 4 69435889 69485827 49939 Loss 0 0.968416 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400340CD male "research_filter, clinical_filter" RKMW41925 4 69435889 69485827 49939 Loss 0 0.96365 40 1280 chas 99.98 Loss 100 Loss 90.62 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400323AA female "research_filter, clinical_filter" LDEW86321 4 69435889 69485827 49939 Loss 0 0.963164 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401786WD male "research_filter, clinical_filter" IXLI37228 4 69435889 69485827 49939 Loss 0 0.963459 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400241CP male "research_filter, clinical_filter" HBRB11217 4 69435889 69485827 49939 Loss 0 0.959915 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400302HW male "research_filter, clinical_filter" MGYM61346 4 69435889 69485827 49939 Loss 0 0.957352 40 1280 chas 99.98 Loss 58.42 Loss 85.27 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400974PS female "research_filter, clinical_filter" AWAR79338 4 69435889 69485827 49939 Loss 0 0.950487 40 1280 chas 99.98 Loss 60.13 Loss 98.3 Loss LossLossLoss 33 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400859SC male "research_filter, clinical_filter" DLXG88049 4 69435889 69485827 49939 Loss 0 0.964729 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400927BD male "research_filter, clinical_filter" CYTX87896 4 69435889 69485827 49939 Loss 1 0.948277 40 1280 chas 99.98 Loss 98.29 Loss 90.23 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400967PK male "research_filter, clinical_filter" DZNQ84721 4 69435889 69485827 49939 Loss 0 0.95648 40 1280 chas 99.98 Loss 60.13 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400866RR male "research_filter, clinical_filter" PBNY43846 4 69435889 69485827 49939 Loss 1 0.950942 40 1280 chas 99.98 Loss 98.29 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400702PA female "research_filter, clinical_filter" TPDE39419 4 69435889 69485827 49939 Loss 0 0.967884 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401369GR male "research_filter, clinical_filter" GWFO72077 4 69435889 69485827 49939 Loss 0 0.953919 40 1280 chas 100 Loss 60.13 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401536BD female "research_filter, clinical_filter" OAGJ33866 4 69435889 69485827 49939 Loss 0 0.954621 40 1280 chas 100 Loss 58.42 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401265CB male "research_filter, clinical_filter" OOSY20649 4 69435889 69485827 49939 Loss 0 0.954334 40 1280 chas 99.98 Loss 98.29 Loss 90.62 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401817MC female "research_filter, clinical_filter" JABM59002 4 69435889 69485827 49939 Loss 0 0.956267 40 1280 chas 100 Loss 98.29 Loss 97.52 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400328LM female "research_filter, clinical_filter" QKSF16477 4 69435889 69485827 49939 Loss 0 0.961958 40 1280 chas 99.98 Loss 100 Loss 100.01 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401749DJ male "research_filter, clinical_filter" UMLY49839 4 69435889 69485827 49939 Loss 1 0.947549 40 1280 chas 99.98 Loss 53.12 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401419SW male "research_filter, clinical_filter" EGYT92211 4 69435889 69485827 49939 Loss 1 0.948639 40 1280 chas 99.98 Loss 60.13 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401402EN male "research_filter, clinical_filter" RGHO54100 4 69435889 69485827 49939 Loss 0 0.960919 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401882CR male "research_filter, clinical_filter" ZDRZ89201 4 69435889 69485827 49939 Loss 0 0.962762 40 1280 chas 99.98 Loss 58.42 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401855RE male "research_filter, clinical_filter" BTMS28214 4 69435889 69485827 49939 Loss 0 0.963487 40 1280 chas 99.98 Loss 100 Loss 98.3 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400526DR male "research_filter, clinical_filter" KGUZ66103 4 69435889 69485827 49939 Loss 0 0.9682 40 1280 chas 99.98 Loss 100 Loss 90.23 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401596PJ male "research_filter, clinical_filter" QITC50272 4 69435889 69485827 49939 Loss 1 0.952183 40 1280 chas 99.98 Loss 98.29 Loss 90.23 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401012TP female "research_filter, clinical_filter" KQIO31508 4 69435889 69485827 49939 Loss 0 0.960447 40 1280 chas 99.98 Loss 100 Loss 85.99 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400507VD male "research_filter, clinical_filter" QRSF74396 4 69435889 69485827 49939 Loss 1 0.946058 40 1280 chas 99.98 Loss 98.3 Loss 100 Loss LossLossLoss 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401500OM male "research_filter, clinical_filter" RWTQ90156 4 69435889 69485827 49939 Gain 3 0.891613 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 100 Gain GTC "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400717BD male research_filter QMCQ87044 4 69435889 69485827 49939 Gain 3 0.898451 40 1280 chas 99.98 Gain 32.83 Gain 0 - GainGain- 33 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400152MR male research_filter KECG80750 4 69435889 69485827 49939 Gain 3 0.886922 40 1280 chas 99.98 Gain 56.62 Gain 0 - GainGain- 33 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400893ZE male research_filter SBST92406 4 69435889 69485827 49939 Gain 3 0.885315 40 1280 chas 99.98 Gain 96.56 Gain 0 - GainGain- 33 100 Gain GTC "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 401926MR_1 male research_filter RAZI40834 4 69435889 69485827 49939 Gain 3 0.889903 40 1280 chas 99.98 Gain 56.62 Gain 0 - GainGain- 33 100 Gain "GTC,IP6" "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400021ME_1 male research_filter ZJYL67451 4 69435889 69485827 49939 Gain 3 0.887919 40 1280 chas 99.98 Gain 98.29 Gain 0 - GainGain- 33 0 - - "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_no 401025SM male research_filter AXJJ81139 4 69435889 69485827 49939 Gain 3 0.8899 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 100 "Gain,Loss" "BS,IP6" "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400432VA male research_filter YZQJ34471 4 69435889 69485827 49939 Gain 3 0.885903 40 1280 chas 99.98 Gain 98.29 Gain 0 - GainGain- 33 100 Gain GTC "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400482MD male research_filter EZDG77492 4 69435889 69485827 49939 Gain 3 0.892997 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 100 Gain GTC "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes affy6_yes 400308SP male research_filter MAAD53838 4 69435889 69485827 49939 Gain 3 0.88898 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401517PR male research_filter ERUW26412 4 69435889 69485827 49939 Gain 3 0.892879 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401308LD male research_filter KXKI34745 4 69435889 69485827 49939 Gain 3 0.889834 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401994BD male research_filter YITU99076 4 69435889 69485827 49939 Gain 3 0.888436 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401362ME male research_filter DOUQ66820 4 69435889 69485827 49939 Gain 3 0.88803 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401303FM male research_filter WWCZ24238 4 69435889 69485827 49939 Gain 3 0.895853 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401736BF male research_filter ZKCL87954 4 69435889 69485827 49939 Gain 3 0.899427 40 1280 chas 99.98 Gain 68.83 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401698SB male research_filter QSVT75164 4 69435889 69485827 49939 Gain 3 0.901672 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401791FG male research_filter AFRT86195 4 69435889 69485827 49939 Gain 3 0.891532 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400844GP male research_filter JKGU55742 4 69435889 69485827 49939 Gain 3 0.898008 40 1280 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400880TM male research_filter RTCT86718 4 69435889 69485827 49939 Gain 3 0.895054 40 1280 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400201PK male research_filter XNFN85306 4 69435889 69485827 49939 Gain 3 0.900109 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401797LS male research_filter ASYD11505 4 69435889 69485827 49939 Gain 3 0.901706 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402024BB male research_filter KJKF45195 4 69435889 69485827 49939 Gain 3 0.891302 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401132CH male research_filter YDLH53232 4 69435889 69485827 49939 Gain 3 0.897584 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401691HA male research_filter JPSN96941 4 69435889 69485827 49939 Gain 3 0.897749 40 1280 chas 100 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401612HB male research_filter DQOA73385 4 69435889 69485827 49939 Gain 3 0.901876 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401592NR male research_filter DJYF53115 4 69435889 69485827 49939 Gain 3 0.913871 40 1280 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401184MM male research_filter FDGT59945 4 69435889 69485827 49939 Gain 3 0.88827 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401475MK male research_filter XROV61149 4 69435889 69485827 49939 Gain 3 0.89833 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401480PG male research_filter EHXC97365 4 69435889 69485827 49939 Gain 3 0.895422 40 1280 chas 99.98 Gain 61.11 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401415CB male research_filter ZWJR15881 4 69435889 69485827 49939 Gain 3 0.892754 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401119DK male research_filter GLGF34868 4 69435889 69485827 49939 Gain 3 0.895411 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401268PS male research_filter TGHP62000 4 69435889 69485827 49939 Gain 3 0.888842 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400882DD male research_filter FCFF79727 4 69435889 69485827 49939 Gain 3 0.893493 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401384BP male research_filter UEII10946 4 69435889 69485827 49939 Gain 3 0.886346 40 1280 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401913GT male research_filter MLXC26947 4 69435889 69485827 49939 Gain 3 0.891187 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401977ES male research_filter QEPL68818 4 69435889 69485827 49939 Gain 3 0.890529 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402028BD male research_filter PCSL59179 4 69435889 69485827 49939 Gain 3 0.893568 40 1280 chas 99.98 Gain 98.29 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401879HJ male research_filter FVSF76751 4 69435889 69485827 49939 Gain 3 0.897085 40 1280 chas 99.98 Gain 98.29 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401869BG male research_filter AGBJ55549 4 69435889 69485827 49939 Gain 3 0.898183 40 1280 chas 99.98 Gain 100 Gain 100 Gain GainGainGain 33 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 402016HZ male research_filter FPUC66465 4 69435889 69485827 49939 Gain 3 0.906963 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 400827MM male research_filter UCQK65306 4 69435889 69485827 49939 Gain 3 0.886757 40 1280 chas 99.98 Gain 0 - 0 - Gain-- 33 NA NA NA "ChAS,IPN" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401196CR male research_filter JPEZ22320 4 69435889 69485827 49939 Gain 3 0.90251 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401149VA male research_filter CVUT48167 4 69435889 69485827 49939 Gain 3 0.891865 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401898DS male research_filter TUOI10912 4 69435889 69485827 49939 Gain 3 0.901088 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401792KR male research_filter UWAE35667 4 69435889 69485827 49939 Gain 3 0.903376 40 1280 chas 99.98 Gain 100 Gain 0 - GainGain- 33 NA NA NA "ChAS,IPN,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_yes algo_yes NA 401861GG male research_filter PVOR72227 4 69435889 69485827 49939 Gain 3 0.889626 40 1280 chas 0 - 96.42 Gain 0 - -Gain- 33 100 Gain GTC "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400870KC female research_filter GYNG28087 4 69435889 69485827 49939 Gain 3 0.891765 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 100 Gain GTC "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400520FM female research_filter ICDL89338 4 69435889 69485827 49939 Gain 3 0.887842 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 0 - - "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400977SC female research_filter OYDK45967 4 69435889 69485827 49939 Gain 3 0.88366 40 1280 chas 0 - 98.29 Gain 0 - -Gain- 33 100 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 401162TM female research_filter CKLN80228 4 69435889 69485827 49939 Gain 3 0.890559 40 1280 chas 0 - 74.12 Gain 0 - -Gain- 33 0 - - "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400695PH female research_filter JYQV48819 4 69435889 69485827 49939 Gain 3 0.889232 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 0 - - "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400449PK female research_filter YMBI36841 4 69435889 69485827 49939 Gain 3 0.889358 40 1280 chas 0 - 96.56 Gain 0 - -Gain- 33 100 Gain IP6 "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 401321CE female research_filter YWSA20061 4 69435889 69485827 49939 Gain 3 0.88693 40 1280 chas 0 - 94.03 Gain 0 - -Gain- 33 100 Gain IP6 "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400101EH female research_filter FSQK31243 4 69435889 69485827 49939 Gain 3 0.8961 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 100 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400863SS female research_filter EJLX27201 4 69435889 69485827 49939 Gain 3 0.895624 40 1280 chas 0 - 61.11 Gain 0 - -Gain- 33 100 Gain "GTC,IP6" "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400545EW_1 female research_filter NYDB63609 4 69435889 69485827 49939 Gain 3 0.891259 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 0 - - "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_no 400138LA female research_filter JSIF57066 4 69435889 69485827 49939 Gain 3 0.899305 40 1280 chas 0 - 50.29 Gain 0 - -Gain- 33 91.76 Gain GTC "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400512LR female research_filter GPMX61747 4 69435889 69485827 49939 Gain 3 0.905071 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 100 Gain IP6 "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400079AP female research_filter UYMD11362 4 69435889 69485827 49939 Gain 3 0.900357 40 1280 chas 0 - 100 Gain 100 Gain #NAME? 33 100 Gain IP6 "ChAS,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes affy6_yes 400030WD female research_filter SLNP19984 4 69435889 69485827 49939 Gain 3 0.896073 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401152MV female research_filter UOXQ52793 4 69435889 69485827 49939 Gain 3 0.889006 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400791GC female research_filter IWPA56866 4 69435889 69485827 49939 Gain 3 0.893067 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401700BN_1 female research_filter RLDP86471 4 69435889 69485827 49939 Gain 3 0.886534 40 1280 chas 0 - 56.62 Gain 100 Gain #NAME? 33 NA NA NA "ChAS,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400329HJ female research_filter ZQFY18932 4 69435889 69485827 49939 Gain 3 0.889974 40 1280 chas 0 - 68.83 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400341GL female research_filter CVWU93815 4 69435889 69485827 49939 Gain 3 0.887448 40 1280 chas 0 - 43.28 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401253MC female research_filter YHQC23155 4 69435889 69485827 49939 Gain 3 0.892557 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401906DT female research_filter SBQG40276 4 69435889 69485827 49939 Gain 3 0.898824 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400145BL female research_filter LHVX52107 4 69435889 69485827 49939 Gain 3 0.890248 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401341TS female research_filter GWDY85049 4 69435889 69485827 49939 Gain 3 0.895185 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401093VL female research_filter FGSE34256 4 69435889 69485827 49939 Gain 3 0.896159 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401646MC female research_filter GDLU88739 4 69435889 69485827 49939 Gain 3 0.903491 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400268SY female research_filter RXUT32164 4 69435889 69485827 49939 Gain 3 0.885325 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401813DN female research_filter XZCA75295 4 69435889 69485827 49939 Gain 3 0.891431 40 1280 chas 0 - 42.64 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400033KC female research_filter LELT20618 4 69435889 69485827 49939 Gain 3 0.895711 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400211BJ female research_filter NOIN63241 4 69435889 69485827 49939 Gain 3 0.889626 40 1280 chas 0 - 76.62 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400641WJ female research_filter LLRB50237 4 69435889 69485827 49939 Gain 3 0.894229 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401594MP female research_filter SSWV37655 4 69435889 69485827 49939 Gain 3 0.894334 40 1280 chas 0 - 38.06 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401706BJ female research_filter SBTA40047 4 69435889 69485827 49939 Gain 3 0.896003 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401628GC female research_filter YDIQ26421 4 69435889 69485827 49939 Gain 3 0.900822 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401591BE female research_filter TDDJ68763 4 69435889 69485827 49939 Gain 3 0.889286 40 1280 chas 0 - 98.29 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 401250WD female research_filter IORF34772 4 69435889 69485827 49939 Gain 3 0.894244 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400261RN female research_filter TGEC92715 4 69435889 69485827 49939 Gain 3 0.893459 40 1280 chas 0 - 100 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 4000046CJ female research_filter BTJZ41884 4 69435889 69485827 49939 Gain 3 0.894808 40 1280 chas 0 - 98.29 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400068PW female research_filter ROFY65487 4 69435889 69485827 49939 Gain 3 0.898239 40 1280 chas 0 - 28.22 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400683EC female research_filter HHAT36498 4 69435889 69485827 49939 Gain 3 0.899999 40 1280 chas 0 - 9.84 Gain 0 - -Gain- 33 NA NA NA "ChAS,NXS" 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_yes NA 400574MA female research_filter WZBZ52169 4 69435889 69485827 49939 Gain 3 0.891624 40 1280 chas 0 - 0 - 0 - --- 33 100 Gain "GTC,IP6" ChAS 4q13.2 - - 0 - 0 - - - "49939(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 33 - 0 "49939(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" FALSE TRUE ipn_no algo_no affy6_yes 401619BT female - QVQY90814 X 91880421 91930346 49926 Loss 1 0.881322 21 2496 chas 0 - 0 - 0 - --- 17 NA NA NA ChAS Xq21.32 - - 0 - 0 - - - "49926(2|Pang(2010),Conrad(2009))" - 100 17 - 0 "49926(5|Pang(2010),Conrad(2009),Durbin(2010))" FALSE TRUE ipn_no algo_no NA 401311GL female - SRQH11774 2 14466337 14516259 49923 Gain 3 0.90141 32 1610 chas 89.5 Gain 94.74 Gain 0 - GainGain- 36 NA NA NA "ChAS,IPN,NXS" 2p24.3 - - 0 - 0 - - - - - - 36 - 0 "49923(6|Pinto(2011),Wong(2007),Shaikh(2009),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 401410BJ male research_filter OSBA52088 11 49708344 49758260 49917 Loss 0 0.952582 49 1039 chas 72.15 Loss 96.22 Loss 74.3 Loss LossLossLoss 25 NA NA NA "ChAS,IPN,NXS,PTK" 11p11.12 - LOC440040 1 - 0 - - "17846(2|Kidd(2008),Tuzun(2005))" "49917(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 25 - 0 "49917(86|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Campbell(2011),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Pinto(2011),Jakobsson(2008),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401617KM female "research_filter, clinical_filter" KRGM31190 11 49708362 49758260 49899 Loss 1 0.895689 48 1061 chas 72.18 Loss 74.32 Loss 0 - LossLoss- 25 93.47 Loss "BS,IP6" "ChAS,IPN,NXS" 11p11.12 - LOC440040 1 - 0 - - "17846(2|Kidd(2008),Tuzun(2005))" "49899(12|Conrad(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 25 - 0 "49899(86|Ju(2010),Wong(2007),Redon(2006),Teague(2010),Perry(2008),Conrad(2009),Itsara(2009),Levy(2007),Campbell(2011),Altshuler(2010),Durbin(2010),Kidd(2010b),Kidd(2008),McCarroll(2008),Cooper(2008),Tuzun(2005),Park(2010),Pinto(2011),Jakobsson(2008),Kim(2009),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400235MP_1 male "research_filter, clinical_filter" BCMG96058 Y 24153941 24203815 49875 Gain 2 0.852092 132 380 chas 17.83 Gain 0 - 0 - Gain-- 1 NA NA NA "ChAS,IPN" Yq11.223 - - 0 - 0 - "49875#2%""AZFb"":5947153,""AZFb+AZFc"":7829005" - 49875(2|Matsuzaki(2009)) - 100 1 - 0 "49875(3|Locke(2006),Redon(2006),Durbin(2010))" FALSE TRUE ipn_yes algo_yes NA 400013TA male research_filter OVRI44012 1 72762663 72812526 49864 Loss 1 0.929175 29 1780 chas 81.3 Loss 79.79 Loss 87.11 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49864(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49864(272|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400083TG male "research_filter, clinical_filter" BQMP83404 1 72762663 72812526 49864 Loss 1 0.912572 29 1780 chas 82.55 Loss 87.14 Loss 87.11 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49864(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49864(272|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400474GF female "research_filter, clinical_filter" GPMX61747 1 72762663 72812526 49864 Loss 1 0.921923 29 1780 chas 0 - 87.14 Loss 87.11 Loss #NAME? 52 84.72 Loss "BS,GTC,IP6" "ChAS,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49864(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49864(272|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes affy6_yes 400079AP female "research_filter, clinical_filter" EHLK43437 4 69435967 69485827 49861 Loss 1 0.952941 38 1347 chas 100 Loss 58.35 Loss 98.3 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401192MJ male "research_filter, clinical_filter" LHRU87236 4 69435967 69485827 49861 Loss 1 0.962443 38 1347 chas 100 Loss 98.29 Loss 90.21 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401038LN female "research_filter, clinical_filter" JPDY25055 4 69435967 69485827 49861 Loss 1 0.951163 38 1347 chas 100 Loss 53.04 Loss 85.25 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401102RD male "research_filter, clinical_filter" WPZH96755 4 69435967 69485827 49861 Loss 1 0.959859 38 1347 chas 100 Loss 100 Loss 100.01 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400072GR male "research_filter, clinical_filter" QRKX79081 4 69435967 69485827 49861 Loss 1 0.958449 38 1347 chas 100 Loss 100 Loss 95.04 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 400631SJ male "research_filter, clinical_filter" ISXJ62958 4 69435967 69485827 49861 Loss 1 0.946773 38 1347 chas 100 Loss 60.06 Loss 98.3 Loss LossLossLoss 30 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes affy6_yes 401956DQ male "research_filter, clinical_filter" ZRKC95930 4 69435967 69485827 49861 Loss 1 0.949124 38 1347 chas 100 Loss 98.29 Loss 95.04 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400242TP female "research_filter, clinical_filter" WSSG80726 4 69435967 69485827 49861 Loss 1 0.957951 38 1347 chas 100 Loss 100 Loss 98.3 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" WNMH95182 4 69435967 69485827 49861 Loss 1 0.955755 38 1347 chas 100 Loss 100 Loss 98.3 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" MKDG25249 4 69435967 69485827 49861 Loss 1 0.94631 38 1347 chas 100 Loss 53.04 Loss 98.3 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401420PJ male "research_filter, clinical_filter" PRPG47770 4 69435967 69485827 49861 Loss 1 0.943127 38 1347 chas 100 Loss 51.33 Loss 93.33 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401695BT female "research_filter, clinical_filter" SXNO44692 4 69435967 69485827 49861 Loss 1 0.950079 38 1347 chas 100 Loss 60.06 Loss 98.3 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401949MN male "research_filter, clinical_filter" LNDH30137 4 69435967 69485827 49861 Loss 1 0.940803 38 1347 chas 100 Loss 100 Loss 85.25 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401808PS male "research_filter, clinical_filter" QMEK60192 4 69435967 69485827 49861 Loss 1 0.962921 38 1347 chas 100 Loss 98.29 Loss 98.29 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401711WS male "research_filter, clinical_filter" EGVC41637 4 69435967 69485827 49861 Loss 1 0.961571 38 1347 chas 100 Loss 100 Loss 98.3 Loss LossLossLoss 30 NA NA NA "ChAS,IPN,NXS,PTK" 4q13.2 - - 0 - 0 - - - "49861(29|Conrad(2009),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),Levy(2007),Altshuler(2010),Matsuzaki(2009),Pang(2010),McCarroll(2008),Park(2010),Wheeler(2008))" 459(1|Conrad(2005)) - 30 - 0 "49861(300|Ju(2010),Redon(2006),Perry(2008),Conrad(2009),Levy(2007),Altshuler(2010),Conrad(2006),Durbin(2010),Pang(2010),Park(2010),Wilson(2010),McCarroll(2008),Cooper(2008),Campbell(2011),Pinto(2011),Wheeler(2008),De(Smith_2007))" TRUE TRUE ipn_yes algo_yes NA 401939GD male "research_filter, clinical_filter" WUMM65746 6 162912514 162962360 49847 Loss 1 0.933161 76 664 chas 100 Loss 100 Loss 100 Loss LossLossLoss 51 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 6q26 - PARK2 1 - 0 PARK2 - - "49847(12|Jakobsson(2008),Perry(2008),Itsara(2009),Pinto(2007),Redon(2006),Zogopoulos(2007))" - - 51 PARK2#asd_candidate 1 "49847(20|Redon(2006),Perry(2008),Itsara(2009),Pinto(2007),Jakobsson(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400077EB female "research_filter, clinical_filter" JFSR33951 10 26864331 26914165 49835 Loss 1 0.907963 66 766 chas 99.93 Loss 90.28 Loss 100 Loss LossLossLoss 36 99.95 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p12.1 - LINC00264 1 LINC00264 1 - - - "49835(3|Wang(2008),Shaikh(2009),Bentley(2008))" - 95 36 - 0 "49835(16|Korbel(2007),Itsara(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 400444MM female "research_filter, clinical_filter" DOIH36842 11 49710848 49760676 49829 Loss 1 0.874545 57 889 chas 99.98 Loss 73.12 Loss 0 - LossLoss- 34 NA NA NA "ChAS,IPN,NXS" 11p11.12 - LOC440040 1 - 0 - - "20262(2|Kidd(2008),Tuzun(2005))" "49829(15|Conrad(2009),Ahn(2009),Redon(2006),Matsuzaki(2009),Perry(2008),Ju(2010),de Smith(2007),Altshuler(2010),Gusev(2009),McCarroll(2008),Park(2010),Kim(2009))" - 100 33 - 0 "49829(89|Ju(2010),Redon(2006),Teague(2010),Tuzun(2005),Pinto(2011),Kidd(2008),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),Jakobsson(2008),Cooper(2008),Campbell(2011),Wong(2007),Perry(2008),Itsara(2009),Levy(2007),Durbin(2010),Kidd(2010b),Altshuler(2010),Park(2010))" TRUE TRUE ipn_yes algo_yes NA 401858TP male "research_filter, clinical_filter" QEPL68818 3 173239853 173289667 49815 Gain 3 0.899445 49 1037 chas 99.9 Gain 99.94 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49815(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49815(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 402028BD male research_filter OWVL37831 3 173239853 173289667 49815 Gain 3 0.903883 49 1037 chas 99.77 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49815(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49815(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400770MA female research_filter NUHG48677 10 26864356 26914165 49810 Loss 1 0.901635 64 790 chas 99.98 Loss 100 Loss 100 Loss LossLossLoss 36 99.98 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 10p12.1 - LINC00264 1 LINC00264 1 - - - "49810(3|Wang(2008),Shaikh(2009),Bentley(2008))" - 95 36 - 0 "49810(16|Korbel(2007),Itsara(2009),Durbin(2010),Bentley(2008),Wang(2008),Shaikh(2009))" TRUE TRUE ipn_yes algo_yes affy6_yes 40050SB female "research_filter, clinical_filter" FOMC40154 3 173239853 173289640 49788 Gain 3 0.914795 48 1059 chas 98.43 Gain 100 Gain 0 - GainGain- 23 98.43 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 401096SL male research_filter UCFR59681 3 173239853 173289640 49788 Gain 3 0.881949 48 1059 chas 81.65 Gain 99.94 Gain 0 - GainGain- 23 98.43 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400319HT male research_filter UCHK30425 3 173239853 173289640 49788 Gain 3 0.890195 48 1059 chas 99.9 Gain 87.12 Gain 0 - GainGain- 23 100 Gain "BS,IP6" "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes affy6_yes 400385LJ female research_filter SLNP19984 3 173239853 173289640 49788 Gain 3 0.910057 48 1059 chas 85.88 Gain 86.51 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401152MV female research_filter FJSF95972 3 173239853 173289640 49788 Gain 3 0.89429 48 1059 chas 99.9 Gain 99.75 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401020DJ female research_filter IJCH39724 3 173239853 173289640 49788 Gain 3 0.901629 48 1059 chas 98.43 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401571SD male research_filter RZMS47755 3 173239853 173289640 49788 Gain 3 0.888829 48 1059 chas 99.9 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400387HE female research_filter UAYA68179 3 173239853 173289640 49788 Gain 3 0.889775 48 1059 chas 99.9 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401729AC female research_filter XBDZ94110 3 173239853 173289640 49788 Gain 3 0.893082 48 1059 chas 81.65 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400649PS male research_filter VRMG83827 3 173239853 173289640 49788 Gain 3 0.880701 48 1059 chas 98.43 Gain 99.17 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401769CR male research_filter ERKP22336 3 173239853 173289640 49788 Gain 3 0.897463 48 1059 chas 99.82 Gain 99.96 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 401726LW female research_filter BOFG10595 3 173239853 173289640 49788 Gain 3 0.892989 48 1059 chas 98.43 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400230TB male research_filter JIVU24920 3 173239853 173289640 49788 Gain 3 0.895259 48 1059 chas 99.82 Gain 100 Gain 0 - GainGain- 23 NA NA NA "ChAS,IPN,NXS" 3q26.31 - NLGN1 1 - 0 - - - "49788(12|Wang(2007),Redon(2006),Perry(2008),de Smith(2007),Itsara(2009),McCarroll(2008),Shaikh(2009))" - - 23 NLGN1#asd_candidate 1 "49788(48|Wang(2007),Redon(2006),Perry(2008),Itsara(2009),Durbin(2010),Bentley(2008),Kidd(2008),McCarroll(2008),De(Smith_2007),Shaikh(2009),Mills(2006))" FALSE TRUE ipn_yes algo_yes NA 400168HC female research_filter ZQHJ50767 1 72762663 72812440 49778 Loss 1 0.932326 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400888MS female "research_filter, clinical_filter" XTPE89033 1 72762663 72812440 49778 Loss 1 0.940597 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 85.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400817MB male "research_filter, clinical_filter" UZKE50615 1 72762663 72812440 49778 Loss 1 0.934552 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400789KV male "research_filter, clinical_filter" VAOW46427 1 72762663 72812440 49778 Loss 1 0.913631 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400528LR male "research_filter, clinical_filter" SRJV59260 1 72762663 72812440 49778 Loss 1 0.925301 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 100 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400737GC female "research_filter, clinical_filter" LAYE10086 1 72762663 72812440 49778 Loss 1 0.927201 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 85.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400141CC female "research_filter, clinical_filter" CCNM95095 1 72762663 72812440 49778 Loss 1 0.933493 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 85.71 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401881TJ male "research_filter, clinical_filter" YLSX27992 1 72762663 72812440 49778 Loss 1 0.910596 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400381CA female "research_filter, clinical_filter" LTTD14271 1 72762663 72812440 49778 Loss 1 0.923643 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 87.27 "Gain,Loss" "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400050RL female "research_filter, clinical_filter" YWSA20061 1 72762663 72812440 49778 Loss 1 0.936018 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400101EH female "research_filter, clinical_filter" TCSA61368 1 72762663 72812440 49778 Loss 1 0.939219 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 85.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400360SM male "research_filter, clinical_filter" EGQB52790 1 72762663 72812440 49778 Loss 1 0.92819 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 85.68 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400277LM female "research_filter, clinical_filter" DEUS78198 1 72762663 72812440 49778 Loss 1 0.930821 28 1843 chas 81.44 Loss 79.92 Loss 87.27 Loss LossLossLoss 52 85.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401721CP male "research_filter, clinical_filter" KGCF91244 1 72762663 72812440 49778 Loss 1 0.937739 28 1843 chas 81.44 Loss 86.47 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401112LG_1 female "research_filter, clinical_filter" QGND60775 1 72762663 72812440 49778 Loss 1 0.933545 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401085LA_1 female "research_filter, clinical_filter" BGWX92658 1 72762663 72812440 49778 Loss 1 0.929776 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 85.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401566DD male "research_filter, clinical_filter" AZMC27188 1 72762663 72812440 49778 Loss 1 0.929621 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400209BS_1 female "research_filter, clinical_filter" KRCX57170 1 72762663 72812440 49778 Loss 1 0.927357 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401460LW male "research_filter, clinical_filter" QMSH77829 1 72762663 72812440 49778 Loss 1 0.915687 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400038CK male "research_filter, clinical_filter" LYLG55293 1 72762663 72812440 49778 Loss 1 0.916304 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 4000657TM female "research_filter, clinical_filter" CUZZ77277 1 72762663 72812440 49778 Loss 1 0.914506 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400105BB female "research_filter, clinical_filter" CZJD30358 1 72762663 72812440 49778 Loss 1 0.924691 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400063BR female "research_filter, clinical_filter" QXAY99372 1 72762663 72812440 49778 Loss 1 0.926917 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400040CN male "research_filter, clinical_filter" PZCO50940 1 72762663 72812440 49778 Loss 1 0.910947 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400204SC male "research_filter, clinical_filter" NBJX82400 1 72762663 72812440 49778 Loss 1 0.946322 28 1843 chas 81.44 Loss 87.29 Loss 70.86 Loss LossLossLoss 52 84.87 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400014SL female "research_filter, clinical_filter" ZJYL67451 1 72762663 72812440 49778 Loss 1 0.917265 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 401025SM male "research_filter, clinical_filter" QRLG88085 1 72762663 72812440 49778 Loss 1 0.913328 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400759FV female "research_filter, clinical_filter" XFEU37018 1 72762663 72812440 49778 Loss 1 0.921069 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400525MR male "research_filter, clinical_filter" TJGR62389 1 72762663 72812440 49778 Loss 1 0.919764 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.87 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400207HN male "research_filter, clinical_filter" CHSN35204 1 72762663 72812440 49778 Loss 1 0.919907 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400674CA male "research_filter, clinical_filter" QRKX79081 1 72762663 72812440 49778 Loss 1 0.929852 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.87 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400631SJ male "research_filter, clinical_filter" EMKM20452 1 72762663 72812440 49778 Loss 1 0.917221 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 85.68 Loss "BS,GTC,IP6" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400107MJ male "research_filter, clinical_filter" ZRXE40373 1 72762663 72812440 49778 Loss 1 0.921094 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 84.84 Loss "BS,GTC" "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes affy6_yes 400730SH male "research_filter, clinical_filter" JTJC66263 1 72762663 72812440 49778 Loss 1 0.906572 28 1843 chas 81.44 Loss 79.92 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400122PL male "research_filter, clinical_filter" PBCS27067 1 72762663 72812440 49778 Loss 1 0.926467 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400422PN male "research_filter, clinical_filter" XUMQ23395 1 72762663 72812440 49778 Loss 1 0.908114 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401875FG male "research_filter, clinical_filter" WSSG80726 1 72762663 72812440 49778 Loss 1 0.916701 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400515ZG male "research_filter, clinical_filter" SYHV89014 1 72762663 72812440 49778 Loss 1 0.924712 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400658BW male "research_filter, clinical_filter" LRBG51365 1 72762663 72812440 49778 Loss 1 0.929063 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400886MP female "research_filter, clinical_filter" AJUD27157 1 72762663 72812440 49778 Loss 1 0.920285 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401075MN female "research_filter, clinical_filter" IJCV29609 1 72762663 72812440 49778 Loss 1 0.92469 28 1843 chas 81.44 Loss 87.29 Loss 70.86 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401263HS female "research_filter, clinical_filter" BKFI83925 1 72762663 72812440 49778 Loss 1 0.927884 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401990PR male "research_filter, clinical_filter" ZYKC24489 1 72762663 72812440 49778 Loss 1 0.924367 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401842BJ male "research_filter, clinical_filter" AUMQ17072 1 72762663 72812440 49778 Loss 1 0.916999 28 1843 chas 81.44 Loss 86.47 Loss 86.45 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401856GC male "research_filter, clinical_filter" TMXA54308 1 72762663 72812440 49778 Loss 1 0.915575 28 1843 chas 81.44 Loss 69.28 Loss 86.24 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400478WE female "research_filter, clinical_filter" RFAX69878 1 72762663 72812440 49778 Loss 1 0.901878 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401586RS male "research_filter, clinical_filter" ZRRL85494 1 72762663 72812440 49778 Loss 1 0.914869 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400043HC female "research_filter, clinical_filter" RLDP86471 1 72762663 72812440 49778 Loss 1 0.910786 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400329HJ female "research_filter, clinical_filter" UBGH15538 1 72762663 72812440 49778 Loss 1 0.917938 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401266HM female "research_filter, clinical_filter" REUG17486 1 72762663 72812440 49778 Loss 1 0.913371 28 1843 chas 82.52 Loss 86.26 Loss 86.45 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401576WC female "research_filter, clinical_filter" LMJA76842 1 72762663 72812440 49778 Loss 1 0.927076 28 1843 chas 82.52 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401284GM female "research_filter, clinical_filter" PBNY43846 1 72762663 72812440 49778 Loss 1 0.888076 28 1843 chas 81.44 Loss 89.12 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400702PA female "research_filter, clinical_filter" QYVK49015 1 72762663 72812440 49778 Loss 1 0.906875 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401494PD male "research_filter, clinical_filter" VRGJ17464 1 72762663 72812440 49778 Loss 1 0.914465 28 1843 chas 81.44 Loss 79.93 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401914PR male "research_filter, clinical_filter" DOUQ66820 1 72762663 72812440 49778 Loss 1 0.913048 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401303FM male "research_filter, clinical_filter" KNEY83753 1 72762663 72812440 49778 Loss 1 0.92527 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400411TG male "research_filter, clinical_filter" EDVH13355 1 72762663 72812440 49778 Loss 1 0.908137 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401347DH male "research_filter, clinical_filter" AVAH45014 1 72762663 72812440 49778 Loss 1 0.923286 28 1843 chas 81.44 Loss 86.26 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401401BA male "research_filter, clinical_filter" LWHQ31793 1 72762663 72812440 49778 Loss 1 0.917259 28 1843 chas 81.44 Loss 75.8 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401353BC male "research_filter, clinical_filter" GTDY31038 1 72762663 72812440 49778 Loss 1 0.894066 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401860TJ male "research_filter, clinical_filter" NVDU55912 1 72762663 72812440 49778 Loss 1 0.909083 28 1843 chas 81.44 Loss 89.12 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401307VR male "research_filter, clinical_filter" FSGH36026 1 72762663 72812440 49778 Loss 1 0.895231 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401254AE male "research_filter, clinical_filter" QJEX76408 1 72762663 72812440 49778 Loss 1 0.930689 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400413FJ female "research_filter, clinical_filter" OBHQ36250 1 72762663 72812440 49778 Loss 1 0.919548 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401011PJ female "research_filter, clinical_filter" DSDE67128 1 72762663 72812440 49778 Loss 1 0.899212 28 1843 chas 81.44 Loss 52.7 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401125LM female "research_filter, clinical_filter" WNMH95182 1 72762663 72812440 49778 Loss 1 0.895439 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401302LJ male "research_filter, clinical_filter" LSSN67820 1 72762663 72812440 49778 Loss 1 0.9257 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401444LD male "research_filter, clinical_filter" SRQH11774 1 72762663 72812440 49778 Loss 1 0.907111 28 1843 chas 81.44 Loss 87.29 Loss 64.99 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401410BJ male "research_filter, clinical_filter" BOFG10595 1 72762663 72812440 49778 Loss 1 0.917141 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400230TB male "research_filter, clinical_filter" LHMB79045 1 72762663 72812440 49778 Loss 1 0.935383 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401285HN male "research_filter, clinical_filter" YQRK14476 1 72762663 72812440 49778 Loss 1 0.904385 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401154BR male "research_filter, clinical_filter" EDMQ40540 1 72762663 72812440 49778 Loss 1 0.911137 28 1843 chas 81.44 Loss 86.26 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401589HP male "research_filter, clinical_filter" DWHR77544 1 72762663 72812440 49778 Loss 1 0.90691 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401468RL male "research_filter, clinical_filter" EIAZ51546 1 72762663 72812440 49778 Loss 1 0.917886 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401261HD male "research_filter, clinical_filter" QBXB16173 1 72762663 72812440 49778 Loss 1 0.924237 28 1843 chas 81.44 Loss 86.26 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402052ZA male "research_filter, clinical_filter" GHOG89686 1 72762663 72812440 49778 Loss 1 0.911981 28 1843 chas 82.52 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401459HF male "research_filter, clinical_filter" YAZD71442 1 72762663 72812440 49778 Loss 1 0.926181 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401859GS male "research_filter, clinical_filter" GVYY53861 1 72762663 72812440 49778 Loss 1 0.915793 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401214BJ male "research_filter, clinical_filter" YQAG97358 1 72762663 72812440 49778 Loss 1 0.908766 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401499JR male "research_filter, clinical_filter" LFVX88346 1 72762663 72812440 49778 Loss 1 0.913937 28 1843 chas 98.92 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401694SG male "research_filter, clinical_filter" IZZO20602 1 72762663 72812440 49778 Loss 1 0.927177 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400594VJ male "research_filter, clinical_filter" XNFN85306 1 72762663 72812440 49778 Loss 1 0.929805 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401797LS male "research_filter, clinical_filter" ASYD11505 1 72762663 72812440 49778 Loss 1 0.930177 28 1843 chas 81.44 Loss 87.29 Loss 95.99 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 402024BB male "research_filter, clinical_filter" QYCK62831 1 72762663 72812440 49778 Loss 1 0.936248 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401556KR male "research_filter, clinical_filter" NFGH10073 1 72762663 72812440 49778 Loss 1 0.930285 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400553PP male "research_filter, clinical_filter" TDCE32526 1 72762663 72812440 49778 Loss 1 0.925168 28 1843 chas 81.44 Loss 89.12 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400583HS male "research_filter, clinical_filter" VDRD32700 1 72762663 72812440 49778 Loss 1 0.922942 28 1843 chas 81.44 Loss 88.58 Loss 95.99 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400271SR male "research_filter, clinical_filter" FSLR52955 1 72762663 72812440 49778 Loss 1 0.924878 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400987FB male "research_filter, clinical_filter" HAAE15834 1 72762663 72812440 49778 Loss 1 0.915428 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401899MB male "research_filter, clinical_filter" YDHD10968 1 72762663 72812440 49778 Loss 1 0.931037 28 1843 chas 81.44 Loss 88.58 Loss 88.57 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401355CD male "research_filter, clinical_filter" ABWI37104 1 72762663 72812440 49778 Loss 1 0.930217 28 1843 chas 81.44 Loss 87.29 Loss 95.99 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401200BD male "research_filter, clinical_filter" YEVU55281 1 72762663 72812440 49778 Loss 1 0.926732 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401453OL male "research_filter, clinical_filter" UJRA83281 1 72762663 72812440 49778 Loss 1 0.909924 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401361GG male "research_filter, clinical_filter" GLGF34868 1 72762663 72812440 49778 Loss 1 0.921098 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401268PS male "research_filter, clinical_filter" TRLD69151 1 72762663 72812440 49778 Loss 1 0.937499 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401514BA male "research_filter, clinical_filter" KKRR12131 1 72762663 72812440 49778 Loss 1 0.917192 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401952UH male "research_filter, clinical_filter" KAYE11117 1 72762663 72812440 49778 Loss 1 0.937707 28 1843 chas 81.44 Loss 89.12 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400686BM male "research_filter, clinical_filter" AVJL63299 1 72762663 72812440 49778 Loss 1 0.93262 28 1843 chas 81.44 Loss 88.58 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 400206SC male "research_filter, clinical_filter" UWAE35667 1 72762663 72812440 49778 Loss 1 0.913932 28 1843 chas 81.44 Loss 87.29 Loss 87.27 Loss LossLossLoss 52 NA NA NA "ChAS,IPN,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_yes algo_yes NA 401861GG male "research_filter, clinical_filter" TDHB82208 1 72762663 72812440 49778 Loss 1 0.9188 28 1843 chas 0 - 88.58 Loss 87.27 Loss #NAME? 52 NA NA NA "ChAS,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009),De(Smith_2007),Conrad(2009),Ahn(2009),McKernan(2009),Perry(2008b),Wong(2007),Perry(2008),Durbin(2010),Kidd(2010),Kidd(2010b),Altshuler(2010),Park(2010),McCarroll(2006))" TRUE TRUE ipn_no algo_yes NA 400923OA female "research_filter, clinical_filter" VVPL10652 1 72762663 72812440 49778 Loss 1 0.916287 28 1843 chas 0 - 88.58 Loss 87.27 Loss #NAME? 52 NA NA NA "ChAS,NXS,PTK" 1p31.1 - - 0 - 0 - - - "49778(41|Conrad(2009),Ahn(2009),Korbel(2007),Conrad(2005),Perry(2008),Ju(2010),de Smith(2007),McKernan(2009),Altshuler(2010),Wang(2008),Matsuzaki(2009),Pang(2010),Kidd(2008),McCarroll(2008),Tuzun(2005),McCarroll(2005),Wheeler(2008),Kim(2009),Park(2010))" 1048(4|Matsuzaki(2009)) - 52 - 0 "49778(271|Teague(2010),Korbel(2007),Redon(2006),Ju(2010),Wang(2008),Campbell(2011),Pang(2010),Tuzun(2005),Pinto(2011),Conrad(2006),Kidd(2008),Wilson(2010),McCarroll(2008),Kim(2009)